Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0004133

Physical Location & Seq

Genomic Coordinates Forward (+)

29290058 .. 29297721

Gene Structure 7664 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1213400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

ATGAAGACAGGCTGTTTCATTGCTTTGATCATTCTGCTATGTGCTTCAGCATCAACGAGCTCAGAGGAGAGCAGCACCACAGAGGAAGTTTTTCTCAGTCAACTAGTCGATCCAGCAACTGGAAAGATTGATGGGGACATGGCACAGCTATTATGGATAAGTTGCAAGGTGGATTTGTTCCGTTTGACGGAAGCTATTGAACATCTTAACTTGTGGTTAACAGAGGAAACATATAGTGGCACAGATGAAATTAATTCAAAAACACGGTTATTGGGAAAAGAAAAGTTTCAAAAACTTATTAATGTCCTGCATCCTGAGGTGAAACGGACTCTATCAGATTGTTTAAGAAAGCATAATCTCCTATTCAGTGTCTCTGGAGAAGAGGGTGCCTCTAAGATTTGGTCTGTCAAGTATATCGAGTCCCTGTTTCCCATACCTTATGTTCCAAGAAGAAATTTGGCTGATGTACCTTCTCCAGCCCCTGCACCAATATATTCTCAACGTAGTCCAGTACCATCTCCTGGTGTAGCACCTTCCACTTCTCAAAGTCCTAGTCCTACACCTGCACGCCGTTCTCCACAAGGATCATTTTTTCCTTCCATTCCCCGAAATTCTGGCCTTCAAGCTTCAGGGCCAGCTTCTGGCTCAAATATACAGGAGCATAAAGGACGAGATGAACGTAAAAAAATTGTTACTGCTGTTGTTATAACTGCATCAGTGACATTTATTGTTGCAGCAGTGCTCTTTTTATGCTGTACTAAAATCTGTAGAAATGGGAAAAAGGATAGACAAAATGATGACAGGCCCCTTCTTAGCCTGAGTCTAACTGATTCTGCTGGTTCTTCATACAAGTCTTATGCTATGGGAAGTTCAATGAAAGAAGAGAAGCTTGACCATCAATCATTAGAATTAGGATCCCCTGGAGGTGCTTCCAAGTTTGACGTATCCAACAATATCAATGGACTAGTACCACCTCCTCCTGGAATATCTCTTCTGAAGCCTCCGCCTGGCAGAGCAAATCCTCTCCCACCTGAACCACCTTCTTCATTTAAGCCTCCTCCCAGCAGGGCTAGTCCTCCTCCAGCGCCTGTCCCACCTCCCGCTTTAAACCCCCCAGGGAGTGCAGGCCCTCGGCCCCCACCTCCTCCAGCACCTCCTGGCCCTCGGCCCCCACCACCTCTAGCACCTCCTGGCCCTCGGCCCCCACCACCTCCAGCACCTCCTGGCCCTCGCCCCCCACCACCTCCAAAGAGCGGCGTTCCTCCTCCTCGGCCACCTCCAGCAATGGCTATTGGTTCAAAGGTAGCTCGACCTCCACCTCTTGCACCAAAACATCCATCGGATGCTGGATCGGAGGTTGATGGTGATGCTCCTAAAACAAAGCTGAAGCCCTTTTTTTGGGATAAGGTTCTAGCAAACCCTGATCATTCAATGGTTTGGCATCAGATTAAGTCAGGATCATTCCAGTTCGATGAAAATATGATTGAAACTCTCTTTGGGTACAACGCTGCTGATAAAAACAAAAATGAACGCAAGAAAGAGTCTTCATCTCAATATCCTACGCCACAGTTTATTCAAATTATTAATCCCAAAAAGGCACAAAATCTATCAATTCTTTTGCGGGCATTGAATGTGACCATAGAAGAAGTCTGTGATGCAATTCGTGAAGGGAATGAGCTTCCCTCGGAATTCTTACAAACTCTGTTGAAGATGGCACCAACACAAGAAGAAGAACTAAAGCTTAGAATGTTCAATGGTCCACTTTCTCAACTTGGGCCTGCTGAGCGGTTTCTAAAAGCGTTGATTGACATCCCATTTGCTTTCAAGCGATTGGAAGCACTACTTTTTATGTGCACTCTTCAGGAGGAGGCCACCCACCTTAAAGAGTCTTTCGCGACCTTAGAGGTTGCTTGTAAGGAACTAAGAAGCAGCCGGCTTTTCCTCAAGCTTTTGGAAGCTGTTCTTAAAACTGGCAATCGCATGAATGACGGAACATTTCGTGGTGGAGCACAAGCTTTCAAACTTGACACACTCTTGAAATTGTTAGATGTAAAAGGAATAGATGGCAAGACAACGCTTTTGCACTTTGTTGTTCAGGAAATAATCCGCTCTGAGGGTGTCAGAGCTGCTCGTACAGCAAAAGAGAGCAGGAGTTTCTCTAGCATCAAAACAGATGATCTCCTTGAGGACACTTCCAATGAAACAGAAGAACATTATCGCAGTCTCGGTCTTGAGAAAGTTTTAGGTTTAAGCAATGAACTTGAGAATGTCAAAAAAGCATCTGTTTTAGATGCTGAAAGCTTAACAGGAACTGTTGCCAAACTTGGTCATGCACTGATAAAAACCCGGGACTTCCTGAACACGAACATGAAAGATTCAGGGGAAGATAGTGAGTTCCATGAAACACTGAAGAGTTTCGTGCAGAATGCTGAGGTTGATATCGTGGGTCTTGTCGAAGAAGAAAAGAGAATCATGGTTCTGGTGAAGAGCACTGGTGACTACTTCCATGGGAGTTCAGGGAAAGATGAGGGCTTACGATTGTTTGTTATTGTGCGAGATTTTTTAATAATCGTAGATAAGGTTTGCAGAGAGGTAAAATTGGCACAAAAAAAGTCAACAAAAGTTCAGAAAAAGGAGACACCTTCCTCTGAACCCCACCAGCCTTCTACAACACCATCGGCCTCTGATCTTAGGCTGCCTCCTCCGCCTGATCTCCATAAGCGGCTTTTCCCGGCAATCCAAGATCGACGAATGGATAACTCTAGCTCAGATGATGAAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007010 GO:0007015 GO:0007275 GO:0008064 GO:0008092 GO:0008150 GO:0008154 GO:0009524 GO:0009653 GO:0009791 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0010638 GO:0016043 GO:0022414 GO:0022607 GO:0030029 GO:0030036 GO:0030041 GO:0030312 GO:0030832 GO:0030833 GO:0030838 GO:0031334 GO:0032271 GO:0032273 GO:0032501 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0034622 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0045010 GO:0048316 GO:0048317 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051258 GO:0051493 GO:0051495 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0090698 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04320 map04320

Pfam Domains

Protein Families

FH2

Protein Analysis

928

Amino Acids

101.2

Weight (kDa)

8.59

Isoelectric Point (pI)

57.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	457 - 858	1.5e-106	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Image

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Publication-ready

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Orthologous Genes (Group: OG0004133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54650 AT5G54650
fragaria_vesca	FvH4_3g21670 FvH4_3g21670 FvH4_3g21670 FvH4_3g21670 FvH4_3g21670 FvH4_3g21670
malus_domestica	MD03G1213400.v1.1 MD11G1228300.v1.1
prunus_persica	Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1
pyrus_communis	pycom03g16200 pycom11g20090
rosa_chinensis	RchiOBHm_Chr5g0037151
rosa_laevigata	RLG00000033762
rosa_multiflora	Rmu_ssc0000448.1_g000003
rosa_roxburghii	Rroxscaffold_1G00043830
rosa_rugosa	Rorug05G0161100 Rorug05G0161100 Rorug05G0161200
rosa_samantha	Rh5AG252800 Rh5BG254700 Rh5CG287200 Rh5DG263200 Rh6CG204900
rosa_wichuraiana	Rw5G023330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	707
AarI	CACCTGC	1 cut(s)	571
Acc36I	ACCTGC	1 cut(s)	571
AccB1I	GGYRCC	2 cut(s)	386, 1714
AccB7I	CCANNNNNTGG	3 cut(s)	119, 521, 641
AccBSI	CCGCTC	3 cut(s)	1254, 1786, 2109
AccII	CGCG	1 cut(s)	1895
AciI	CCGC	8 cut(s)	1004, 1101, 1254, 1621, 1786, 2107, 2705, 2722
AclWI	GGATC	6 cut(s)	104, 592, 909, 922, 1357, 1465
AcoI	YGGCCR	1 cut(s)	1271
AcsI	RAATTY	3 cut(s)	454, 610, 1688
AcuI	CTGAAG	6 cut(s)	30, 612, 1016, 1406, 1844, 2429
AfaI	GTAC	6 cut(s)	468, 513, 757, 969, 1502, 2134
AfiI	CCNNNNNNNGG	9 cut(s)	119, 187, 521, 641, 980, 1007, 1253, 1398, 2113
AhlI	ACTAGT	2 cut(s)	103, 964
AjnI	CCWGG	8 cut(s)	520, 919, 979, 1006, 1114, 1156, 1189, 1222
AjuI	GAANNNNNNNTTGG	2 cut(s)	1479, 1511
Alw21I	GWGCWC	5 cut(s)	62, 744, 1856, 2011, 2492
Alw26I	GTCTC	3 cut(s)	376, 2228, 2630
Alw44I	GTGCAC	1 cut(s)	1852
AlwI	GGATC	6 cut(s)	104, 592, 909, 922, 1357, 1465
AlwNI	CAGNNNCTG	5 cut(s)	119, 482, 641, 1088, 2312
Ama87I	CYCGRG	1 cut(s)	2346
ApaLI	GTGCAC	1 cut(s)	1852
ApeKI	GCWGC	6 cut(s)	72, 734, 1508, 1929, 2126, 2695
ApoI	RAATTY	3 cut(s)	454, 610, 1688
ArsI	GACNNNNNNTTYG	6 cut(s)	538, 570, 1799, 1831, 2062, 2094
AseI	ATTAAT	3 cut(s)	252, 300, 1584
Asp700I	GAANNNNTTC	4 cut(s)	90, 285, 1959, 2414
AspLEI	GCGC	1 cut(s)	1087
AsuC2I	CCSGG	3 cut(s)	2347, 2348, 2732
AsuHPI	GGTGA	4 cut(s)	331, 1376, 2494, 2507
AvaI	CYCGRG	1 cut(s)	2346
AvaII	GGWCC	1 cut(s)	1757
AxyI	CCTNAGG	1 cut(s)	315
BaeGI	GKGCMC	1 cut(s)	1856
BamHI	GGATCC	1 cut(s)	914
BanI	GGYRCC	2 cut(s)	386, 1714
BanII	GRGCYC	1 cut(s)	62
BbsI	GAAGAC	2 cut(s)	11, 1536
Bbv12I	GWGCWC	5 cut(s)	62, 744, 1856, 2011, 2492
BbvCI	CCTCAGC	1 cut(s)	2430
BbvI	GCAGC	6 cut(s)	84, 746, 1495, 1941, 2113, 2682
BccI	CCATC	8 cut(s)	125, 523, 903, 1345, 1355, 1705, 2057, 2683
BceAI	ACGGC	1 cut(s)	555
BciT130I	CCWGG	8 cut(s)	522, 921, 981, 1008, 1116, 1158, 1191, 1224
BciVI	GTATCC	1 cut(s)	955
BclI	TGATCA	2 cut(s)	27, 1423
BcnI	CCSGG	3 cut(s)	2347, 2348, 2732
BcoDI	GTCTC	3 cut(s)	376, 2228, 2630
BcuI	ACTAGT	2 cut(s)	103, 964
BfaI	CTAG	8 cut(s)	104, 552, 965, 1071, 1181, 1412, 2160, 2763
BfmI	CTRYAG	1 cut(s)	766
BfoI	RGCGCY	1 cut(s)	1088
BfuAI	ACCTGC	1 cut(s)	571
BfuI	GTATCC	1 cut(s)	955
BisI	GCNGC	8 cut(s)	73, 735, 1255, 1509, 1930, 2127, 2696, 2723
BlpI	GCTNAGC	1 cut(s)	1782
BlsI	GCNGC	8 cut(s)	74, 736, 1256, 1510, 1931, 2128, 2697, 2724
Bme18I	GGWCC	1 cut(s)	1757
BmeT110I	CYCGRG	1 cut(s)	2346
BmiI	GGNNCC	7 cut(s)	388, 806, 916, 1136, 1169, 1202, 1716
BpiI	GAAGAC	2 cut(s)	11, 1536
BplI	GAGNNNNNCTC	4 cut(s)	374, 406, 1667, 1699
BpmI	CTGGAG	7 cut(s)	396, 459, 942, 1065, 1131, 1197, 1263
Bpu10I	CCTNAGC	1 cut(s)	2430
Bpu1102I	GCTNAGC	1 cut(s)	1782
BpuEI	CTTGAG	4 cut(s)	1928, 2204, 2252, 2282
BpuMI	CCSGG	3 cut(s)	2347, 2348, 2732
BsaBI	GATNNNNATC	1 cut(s)	1808
Bsc4I	CCNNNNNNNGG	9 cut(s)	119, 187, 521, 641, 980, 1007, 1253, 1398, 2113
Bse118I	RCCGGY	1 cut(s)	1932
Bse1I	ACTGG	5 cut(s)	124, 509, 1465, 1975, 2497
Bse21I	CCTNAGG	1 cut(s)	315
Bse3DI	GCAATG	3 cut(s)	18, 1290, 2260
Bse8I	GATNNNNATC	1 cut(s)	1808
BseBI	CCWGG	8 cut(s)	522, 921, 981, 1008, 1116, 1158, 1191, 1224
BseGI	GGATG	4 cut(s)	310, 1333, 1348, 1809
BseJI	GATNNNNATC	1 cut(s)	1808
BseLI	CCNNNNNNNGG	9 cut(s)	119, 187, 521, 641, 980, 1007, 1253, 1398, 2113
BseMI	GCAATG	3 cut(s)	18, 1290, 2260
BseMII	CTCAG	8 cut(s)	75, 109, 306, 809, 1773, 2103, 2421, 2781
BseNI	ACTGG	5 cut(s)	124, 509, 1465, 1975, 2497
BseRI	GAGGAG	9 cut(s)	80, 966, 1047, 1068, 1134, 1254, 1257, 1880, 2691
BseSI	GKGCMC	1 cut(s)	1856
BseXI	GCAGC	6 cut(s)	84, 746, 1495, 1941, 2113, 2682
BseYI	CCCAGC	1 cut(s)	1061
BsgI	GTGCAG	4 cut(s)	468, 549, 1143, 2441
Bsh1236I	CGCG	1 cut(s)	1895
BshNI	GGYRCC	2 cut(s)	386, 1714
BsiHKAI	GWGCWC	5 cut(s)	62, 744, 1856, 2011, 2492
BsiHKCI	CYCGRG	1 cut(s)	2346
BsiSI	CCGG	3 cut(s)	1933, 2347, 2732
BslFI	GGGAC	4 cut(s)	149, 406, 1076, 2363
BslI	CCNNNNNNNGG	9 cut(s)	119, 187, 521, 641, 980, 1007, 1253, 1398, 2113
BsmAI	GTCTC	3 cut(s)	376, 2228, 2630
BsmFI	GGGAC	4 cut(s)	149, 406, 1076, 2363
BsmI	GAATGC	1 cut(s)	2431
BsoBI	CYCGRG	1 cut(s)	2346
Bsp1286I	GDGCHC	5 cut(s)	62, 744, 1856, 2011, 2492
Bsp1720I	GCTNAGC	1 cut(s)	1782
Bsp19I	CCATGG	1 cut(s)	2506
Bsp68I	TCGCGA	1 cut(s)	1895
BspACI	CCGC	8 cut(s)	1004, 1101, 1254, 1621, 1786, 2107, 2705, 2722
BspCNI	CTCAG	8 cut(s)	74, 108, 307, 810, 1774, 2104, 2422, 2780
BspFNI	CGCG	1 cut(s)	1895
BspLI	GGNNCC	7 cut(s)	388, 806, 916, 1136, 1169, 1202, 1716
BspMI	ACCTGC	1 cut(s)	571
BspPI	GGATC	6 cut(s)	104, 592, 909, 922, 1357, 1465
BspQI	GCTCTTC	1 cut(s)	2480
BspT107I	GGYRCC	2 cut(s)	386, 1714
BsrBI	CCGCTC	3 cut(s)	1254, 1786, 2109
BsrDI	GCAATG	3 cut(s)	18, 1290, 2260
BsrFI	RCCGGY	1 cut(s)	1932
BsrI	ACTGG	5 cut(s)	124, 509, 1465, 1975, 2497
BssAI	RCCGGY	1 cut(s)	1932
BssT1I	CCWWGG	1 cut(s)	2506
Bst2UI	CCWGG	8 cut(s)	522, 921, 981, 1008, 1116, 1158, 1191, 1224
Bst4CI	ACNGT	3 cut(s)	267, 1569, 2314
Bst6I	CTCTTC	6 cut(s)	375, 876, 996, 1863, 2405, 2480
BstC8I	GCNNGC	6 cut(s)	568, 636, 1126, 1623, 1779, 1934
BstDSI	CCRYGG	1 cut(s)	2506
BstF5I	GGATG	4 cut(s)	310, 1333, 1348, 1809
BstFNI	CGCG	1 cut(s)	1895
BstH2I	RGCGCY	1 cut(s)	1088
BstHHI	GCGC	1 cut(s)	1087
BstMAI	GTCTC	3 cut(s)	376, 2228, 2630
BstMWI	GCNNNNNNNGC	3 cut(s)	1783, 2135, 2704
BstNI	CCWGG	8 cut(s)	522, 921, 981, 1008, 1116, 1158, 1191, 1224
BstSFI	CTRYAG	1 cut(s)	766
BstSLI	GKGCMC	1 cut(s)	1856
BstUI	CGCG	1 cut(s)	1895
BstV1I	GCAGC	6 cut(s)	84, 746, 1495, 1941, 2113, 2682
BstV2I	GAAGAC	2 cut(s)	11, 1536
BstX2I	RGATCY	1 cut(s)	914
BstYI	RGATCY	1 cut(s)	914
Bsu36I	CCTNAGG	1 cut(s)	315
BsuI	GTATCC	1 cut(s)	955
BtgI	CCRYGG	1 cut(s)	2506
BtsCI	GGATG	4 cut(s)	310, 1333, 1348, 1809
BtsI	GCAGTG	1 cut(s)	744
BtsIMutI	CAGTG	6 cut(s)	373, 723, 744, 2333, 2405, 2490
BtuMI	TCGCGA	1 cut(s)	1895
BveI	ACCTGC	1 cut(s)	571
Cac8I	GCNNGC	6 cut(s)	568, 636, 1126, 1623, 1779, 1934
CaiI	CAGNNNCTG	5 cut(s)	119, 482, 641, 1088, 2312
CfoI	GCGC	1 cut(s)	1087
Cfr10I	RCCGGY	1 cut(s)	1932
Cfr9I	CCCGGG	1 cut(s)	2346
Csp6I	GTAC	6 cut(s)	467, 512, 756, 968, 1501, 2133
CviAII	CATG	7 cut(s)	139, 1981, 2330, 2368, 2399, 2473, 2507
CviQI	GTAC	6 cut(s)	467, 512, 756, 968, 1501, 2133
DraI	TTTAAA	1 cut(s)	1107
EaeI	YGGCCR	1 cut(s)	1271
Eam1104I	CTCTTC	6 cut(s)	375, 876, 996, 1863, 2405, 2480
EarI	CTCTTC	6 cut(s)	375, 876, 996, 1863, 2405, 2480
EciI	GGCGGA	2 cut(s)	993, 2694
Ecl136II	GAGCTC	1 cut(s)	60
Eco130I	CCWWGG	1 cut(s)	2506
Eco24I	GRGCYC	1 cut(s)	62
Eco32I	GATATC	1 cut(s)	2440
Eco47I	GGWCC	1 cut(s)	1757
Eco53kI	GAGCTC	1 cut(s)	60
Eco57I	CTGAAG	6 cut(s)	30, 612, 1016, 1406, 1844, 2429
Eco81I	CCTNAGG	1 cut(s)	315
Eco88I	CYCGRG	1 cut(s)	2346
EcoICRI	GAGCTC	1 cut(s)	60
EcoO109I	RGGNCCY	2 cut(s)	804, 1127
EcoRI	GAATTC	1 cut(s)	1688
EcoRII	CCWGG	8 cut(s)	520, 919, 979, 1006, 1114, 1156, 1189, 1222
EcoRV	GATATC	1 cut(s)	2440
EcoT14I	CCWWGG	1 cut(s)	2506
EcoT38I	GRGCYC	1 cut(s)	62
ErhI	CCWWGG	1 cut(s)	2506
FaeI	CATG	7 cut(s)	142, 1984, 2333, 2371, 2402, 2476, 2510
FalI	AAGNNNNNCTT	6 cut(s)	873, 905, 1827, 1859, 1947, 1979
FaqI	GGGAC	4 cut(s)	149, 406, 1076, 2363
FatI	CATG	7 cut(s)	138, 1980, 2329, 2367, 2398, 2472, 2506
FauI	CCCGC	2 cut(s)	1108, 1614
FbaI	TGATCA	2 cut(s)	27, 1423
Fnu4HI	GCNGC	8 cut(s)	73, 735, 1255, 1509, 1930, 2127, 2696, 2723
FokI	GGATG	4 cut(s)	297, 1320, 1355, 1796
FriOI	GRGCYC	1 cut(s)	62
Fsp4HI	GCNGC	8 cut(s)	73, 735, 1255, 1509, 1930, 2127, 2696, 2723
FspBI	CTAG	8 cut(s)	104, 552, 965, 1071, 1181, 1412, 2160, 2763
GlaI	GCGC	1 cut(s)	1086
GluI	GCNGC	8 cut(s)	73, 735, 1255, 1509, 1930, 2127, 2696, 2723
GsaI	CCCAGC	1 cut(s)	1065
GsuI	CTGGAG	7 cut(s)	396, 459, 942, 1065, 1131, 1197, 1263
HaeII	RGCGCY	1 cut(s)	1088
HapII	CCGG	3 cut(s)	1933, 2347, 2732
HhaI	GCGC	1 cut(s)	1087
Hin1II	CATG	7 cut(s)	142, 1984, 2333, 2371, 2402, 2476, 2510
Hin6I	GCGC	1 cut(s)	1085
HinP1I	GCGC	1 cut(s)	1085
HincII	GTYRAC	3 cut(s)	101, 219, 2616
HindII	GTYRAC	3 cut(s)	101, 219, 2616
HindIII	AAGCTT	6 cut(s)	624, 887, 1739, 1946, 2013, 2299
HinfI	GANTC	8 cut(s)	328, 419, 820, 830, 1541, 1886, 2375, 2469
HpaI	GTTAAC	1 cut(s)	219
HpaII	CCGG	3 cut(s)	1933, 2347, 2732
HphI	GGTGA	4 cut(s)	331, 1376, 2494, 2507
Hpy166II	GTNNAC	5 cut(s)	101, 219, 1760, 1854, 2616
Hpy8I	GTNNAC	5 cut(s)	101, 219, 1760, 1854, 2616
Hpy99I	CGWCG	1 cut(s)	2751
HpyAV	CCTTC	9 cut(s)	480, 543, 606, 629, 818, 1050, 1661, 2652, 2673
HpyCH4III	ACNGT	3 cut(s)	267, 1569, 2314
HpyCH4IV	ACGT	3 cut(s)	502, 679, 942
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1783, 2135, 2704
HpySE526I	ACGT	3 cut(s)	502, 679, 942
Hsp92II	CATG	7 cut(s)	142, 1984, 2333, 2371, 2402, 2476, 2510
HspAI	GCGC	1 cut(s)	1085
KroI	GCCGGC	1 cut(s)	1932
KroNI	GCCGGC	1 cut(s)	1934
Ksp22I	TGATCA	2 cut(s)	27, 1423
KspAI	GTTAAC	1 cut(s)	219
LguI	GCTCTTC	1 cut(s)	2480
LmnI	GCTCC	3 cut(s)	658, 1375, 2006
Lsp1109I	GCAGC	6 cut(s)	84, 746, 1495, 1941, 2113, 2682
MaeI	CTAG	8 cut(s)	104, 552, 965, 1071, 1181, 1412, 2160, 2763
MaeII	ACGT	3 cut(s)	502, 679, 942
MaeIII	GTNAC	4 cut(s)	691, 718, 1633, 2495
MbiI	CCGCTC	3 cut(s)	1254, 1786, 2109
MflI	RGATCY	1 cut(s)	914
MhlI	GDGCHC	5 cut(s)	62, 744, 1856, 2011, 2492
MlyI	GAGTC	5 cut(s)	322, 428, 829, 1550, 1895
MmeI	TCCRAC	1 cut(s)	972
MroNI	GCCGGC	1 cut(s)	1932
MroXI	GAANNNNTTC	4 cut(s)	90, 285, 1959, 2414
MslI	CAYNNNNRTG	1 cut(s)	2366
MspI	CCGG	3 cut(s)	1933, 2347, 2732
Mva1269I	GAATGC	1 cut(s)	2431
MvaI	CCWGG	8 cut(s)	522, 921, 981, 1008, 1116, 1158, 1191, 1224
MvnI	CGCG	1 cut(s)	1895
MwoI	GCNNNNNNNGC	3 cut(s)	1783, 2135, 2704
NaeI	GCCGGC	1 cut(s)	1934
NciI	CCSGG	3 cut(s)	2347, 2348, 2732
NcoI	CCATGG	1 cut(s)	2506
NgoMIV	GCCGGC	1 cut(s)	1932
NlaIII	CATG	7 cut(s)	142, 1984, 2333, 2371, 2402, 2476, 2510
NlaIV	GGNNCC	7 cut(s)	388, 806, 916, 1136, 1169, 1202, 1716
NmeAIII	GCCGAG	4 cut(s)	1111, 1144, 1177, 1249
NmuCI	GTSAC	3 cut(s)	718, 1633, 2495
NruI	TCGCGA	1 cut(s)	1895
PaqCI	CACCTGC	1 cut(s)	571
PasI	CCCWGGG	1 cut(s)	1115
PciSI	GCTCTTC	1 cut(s)	2480
PcsI	WCGNNNNNNNCGW	1 cut(s)	676
PctI	GAATGC	1 cut(s)	2431
PdiI	GCCGGC	1 cut(s)	1934
PdmI	GAANNNNTTC	4 cut(s)	90, 285, 1959, 2414
PfeI	GAWTC	3 cut(s)	830, 2375, 2469
PflMI	CCANNNNNTGG	3 cut(s)	119, 521, 641
PfoI	TCCNGGA	1 cut(s)	979
PkrI	GCNGC	8 cut(s)	74, 736, 1256, 1510, 1931, 2128, 2697, 2724
PleI	GAGTC	5 cut(s)	322, 427, 828, 1549, 1894
PpsI	GAGTC	5 cut(s)	322, 427, 828, 1549, 1894
PshBI	ATTAAT	3 cut(s)	252, 300, 1584
PsiI	TTATAA	1 cut(s)	707
Psp124BI	GAGCTC	1 cut(s)	62
Psp6I	CCWGG	8 cut(s)	520, 919, 979, 1006, 1114, 1156, 1189, 1222
PspFI	CCCAGC	1 cut(s)	1061
PspGI	CCWGG	8 cut(s)	520, 919, 979, 1006, 1114, 1156, 1189, 1222
PspN4I	GGNNCC	7 cut(s)	388, 806, 916, 1136, 1169, 1202, 1716
PstNI	CAGNNNCTG	5 cut(s)	119, 482, 641, 1088, 2312
PsuI	RGATCY	1 cut(s)	914
RruI	TCGCGA	1 cut(s)	1895
RsaI	GTAC	6 cut(s)	468, 513, 757, 969, 1502, 2134
RsaNI	GTAC	6 cut(s)	467, 512, 756, 968, 1501, 2133
RseI	CAYNNNNRTG	1 cut(s)	2366
SacI	GAGCTC	1 cut(s)	62
SapI	GCTCTTC	1 cut(s)	2480
SatI	GCNGC	8 cut(s)	73, 735, 1255, 1509, 1930, 2127, 2696, 2723
SchI	GAGTC	5 cut(s)	322, 428, 829, 1550, 1895
SduI	GDGCHC	5 cut(s)	62, 744, 1856, 2011, 2492
SfcI	CTRYAG	1 cut(s)	766
SinI	GGWCC	1 cut(s)	1757
SmaI	CCCGGG	1 cut(s)	2348
SmiMI	CAYNNNNRTG	1 cut(s)	2366
SmlI	CTYRAG	4 cut(s)	1943, 2183, 2231, 2261
SmoI	CTYRAG	4 cut(s)	1943, 2183, 2231, 2261
SpeI	ACTAGT	2 cut(s)	103, 964
SsiI	CCGC	8 cut(s)	1004, 1101, 1254, 1621, 1786, 2107, 2705, 2722
SspMI	CTAG	8 cut(s)	104, 552, 965, 1071, 1181, 1412, 2160, 2763
SstI	GAGCTC	1 cut(s)	62
StyI	CCWWGG	1 cut(s)	2506
TaaI	ACNGT	3 cut(s)	267, 1569, 2314
TaiI	ACGT	3 cut(s)	505, 682, 945
TaqI	TCGA	6 cut(s)	108, 417, 1309, 1470, 2454, 2746
TaqII	GACCGA	1 cut(s)	2216
TatI	WGTACW	1 cut(s)	755
TauI	GCSGC	2 cut(s)	1257, 2725
TfiI	GAWTC	3 cut(s)	830, 2375, 2469
TscAI	CASTG	6 cut(s)	373, 723, 744, 2340, 2412, 2497
TseFI	GTSAC	3 cut(s)	718, 1633, 2495
TseI	GCWGC	6 cut(s)	72, 734, 1508, 1929, 2126, 2695
Tsp45I	GTSAC	3 cut(s)	718, 1633, 2495
TspGWI	ACGGA	4 cut(s)	170, 203, 340, 2004
TspMI	CCCGGG	1 cut(s)	2346
TspRI	CASTG	6 cut(s)	373, 723, 744, 2340, 2412, 2497
Van91I	CCANNNNNTGG	3 cut(s)	119, 521, 641
VneI	GTGCAC	1 cut(s)	1852
VpaK11BI	GGWCC	1 cut(s)	1757
VspI	ATTAAT	3 cut(s)	252, 300, 1584
XapI	RAATTY	3 cut(s)	454, 610, 1688
XmaI	CCCGGG	1 cut(s)	2346
XmnI	GAANNNNTTC	4 cut(s)	90, 285, 1959, 2414
XspI	CTAG	8 cut(s)	104, 552, 965, 1071, 1181, 1412, 2160, 2763

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.