Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0004133

Physical Location & Seq

Genomic Coordinates Reverse (-)

32859554 .. 32865501

Gene Structure 5948 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G023330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2988 bp

ATGATAATACTACAACAAATGGGTCTTATGAGGACAAGTCGTTTCGTAGTTTTGGTTACTCTGCTTTGTGTTTCAGCTTTGATCAGCTCGGAGGAGAGAGTGATCACAGAAGAAGTGTTTCTCAGTAGACTAGTTGATCCAGCAACTGGAAAGATTGATGGAGATATGGCAGAGCTGTTATGGGTACGTTGCAAGGTAGATTTGACCCAGTTGGTGGAAACTATTCAAGATCTTCACTTATGGTTACCAGAGGAAACATCTAGTAGCGCAGATGAAATTAGTTCAAAAAGACAGTCACTGGAAGAAGAAAATGTGCAGAAACTTATTAGTGTCCTGCATCCTCAGGTGAAACAAACTCTTTCAGATTGTTTCAGAAAGAATAATCTCTTTTTCCGTGTCTCTGGAGAAGAGAATGCCTCCAAGATTTGGTATGCCAAGTATATTGAGTCCCTATTTCCCAGACCTGTTCCAAGAAGGAATATGGGCAGTGAATTGCTCCAGACCTCTGCTGAGGTACCTTCTCCTGCCCCTGCACCAGGATCTTCTAAACTCAGTCCAGCATCATCCCCTGGTCCTGCGCCATCTGCTTCTAGCATTTCTAGGTCCTCGGGCCCTACTACTCCACAAGGATCATTTTTTCCTGTGTCCCGAAATTCGAGTTCACAACCTTCAGTTAGCGAACCAGCTCCCAGCACCATTATACAGATAACTAAGAAAAAGACTGACCATAAAACAATTATCATTGCAGTTGTTGTAACTGCAACAGTGACATTTGTTGTTGCAGCAGTCTTCTTTCTATGCTGTACTAAAATCTGTAGGACACGGCGTAAAGATAGAAAAAATGATGAGAGCCCCCTTCTTTGCCTGAGTAAATCCGACTCTGGAGGTTCTTCTTACAAGTCTTATCCTTTGGAAAATTCAATAAAAGGAGAGAAGATTGAGCATCAATCATTGGAATTAGGATCCATTGGACGTGCATCCAAATCCCGGTATGAAGTGTATGAGGCATCCAGCAATGGGAACGGATGGATACCACCTCCTCCTGGAAGGCCTCCTAATGGACCGCCTCCTCTGAAGCCCCCTCCTGGCAGGGCAAATCCTCTCCCTCCTGAGCCACCTTCTTCTTTTAAGCCTCCTCCTGGCAGGGCGGGTCCACCTCCAACCCCTCCGCCTCCTGTACCACCTCCCACTTTGAAACCATCTGGTGGTGCAGCCCCTCCCCCACCACCTCCAGCTCCTGGTCCTCGGCCCCCACCACCTCCAGCTCCTGGTCCTCGGCCCCCACCACCTCCAGCTCCTGGTCCTTGGCCCCCGCCACCTTCAGCTCCTGGTCCTCCTCCCCCACCACTTCCAAAGATTGGTGTACCTCCTCCTAGGCCACCTCCATCAATGCCTATAGGTTCTAAGCTAGCTCGACCTCCACCATTTGTACCAAAGCGTCCATCAAATGCTGCTTCGAGTGATGGCTCAGAGGCTGATGGTGATGCTCCTAAAACCAAGCTGAAGCCCTTTTTTTGGGATAAGGTTCTAGCAAACCCTGATCATTCAATGGTGTGGCATCAGATTAAATCAGGATCTTTCCAGTTTGATGAGAACATGATTGAATCTCTGTTTGGGTATAATGCTGGTGATAAAAACAAAAACGATCGCAAGAAGGAGTCTTCATCCCAAGATCCTACACCCCAGTTCATTCAACTTATTAATCCCAAAAAGGCACAGAATCTATCAATTCTTCTCCGAGCTTTGAATGTGACAATAGAAGAAGTCTGCGATGCAATTTGTGAAGGAAATGAGCTTCCCATTGAATTCGTTCAAACTTTGTTGAAGATGGCACCAACACAAGAAGAAGAACTAAAGCTCAGGGTGTTCAATGGTGCACTTTCTCAACTTGGGCCTGCTGAACGGTTCTTAAAAGGCTTAATCGACATCCCTTTTGCCTTTAAACGGTTGGAAGCGTTACTTTTTATGTGCACTCTTCAGGAGGAGGTCACCAACCTTAAAGAATCCTTCGCAACCTTAGAGGTTGCTTGCAAGGAACTCAGAAACAGCCGGCTTTTCCTCAAGCTTTTAGAAGCTGTTCTTAAAACTGGCAATCGCATGAATGATGGAACATTTCGTGGTGGTGCACAGGCATTTAAGCTGGACACACTCTTGAAATTGTCAGATGTAAAGGGAACAGATGGCAAGACAACTCTTTTGCACTTTGTTGTTCAGGAAATAATCCGCTCTGAGGGTGTGAGAGCTGCTCGTGCAGCAAAAGAGAACCGGAGTTTCTCTAGCGTCAAAACAGATGATCTCCTTGAGGAAACTTCCCATGACACAGAAGAGCACTATTGTAATCTTGGTCTGGAGAAAGTATCAGGTTTAAGCAATGAACTCGAGAATGTAAAAAAAGCATCAATCTTGGATGCTGATAGCTTAACAGGAACTGTTGCCAAACTTGGAAGTGCTCTGGTAAAAGCCCGAGATTTTCTGAACTCAGACATGAAGAATTCAGGGGAAGAAAGTGGTTTTCATGAAACACTGAAGAGTTTTGTGCAGAATGCTGATGTTGATATCAGGGGTCTCCGTGAGGAAGAAAAGAGAATCATGGCTCTGGTAAAGAGCACTGGAGACTATTTCCATGGGAATGCAGGGAAGGATGAGGGTTTACATTTGTTTGTTGTTGTGCGGGATTTTTTAATAATTTTAGATAAGGTATGCAAAGAAGTGAGATTGAATCCAAAAAAGTTCGCAAAGGTTCAGAAAAAGGAGGCTCCTTCCTCTGATCCCCACCAGCCTCTTACAACGCCATCTGCCTTGATCCCCACCAGCCTCCTTCTCCTGGTCTACGCCAGCCTCCTTTTCCAGATCTCCATCAGCGGCTTTTCCCGGCAATCAAGGATCGGCGCATGGACAATTCTAGCTCAGATGATGAAGGTCCATAGATTTCCATTTCGAGAAGGTGGTAGAATCACAATGACAAAATGCCTGCTCGGTTCTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007010 GO:0007015 GO:0007275 GO:0008064 GO:0008092 GO:0008150 GO:0008154 GO:0009524 GO:0009653 GO:0009791 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0010638 GO:0016043 GO:0022414 GO:0022607 GO:0030029 GO:0030036 GO:0030041 GO:0030312 GO:0030832 GO:0030833 GO:0030838 GO:0031334 GO:0032271 GO:0032273 GO:0032501 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0034622 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0045010 GO:0048316 GO:0048317 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051258 GO:0051493 GO:0051495 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0090698 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04320 map04320

Pfam Domains

Protein Families

FH2

Protein Analysis

995

Amino Acids

108.54

Weight (kDa)

9.03

Isoelectric Point (pI)

54.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	495 - 896	5.5e-110	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54650 AT5G54650
fragaria_vesca	FvH4_3g21670 FvH4_3g21670 FvH4_3g21670 FvH4_3g21670 FvH4_3g21670 FvH4_3g21670
malus_domestica	MD03G1213400.v1.1 MD11G1228300.v1.1
prunus_persica	Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1
pyrus_communis	pycom03g16200 pycom11g20090
rosa_chinensis	RchiOBHm_Chr5g0037151
rosa_laevigata	RLG00000033762
rosa_multiflora	Rmu_ssc0000448.1_g000003
rosa_roxburghii	Rroxscaffold_1G00043830
rosa_rugosa	Rorug05G0161100 Rorug05G0161100 Rorug05G0161200
rosa_samantha	Rh5AG252800 Rh5BG254700 Rh5CG287200 Rh5DG263200 Rh6CG204900
rosa_wichuraiana	Rw5G023330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	514
AccB1I	GGYRCC	2 cut(s)	514, 1831
AccB7I	CCANNNNNTGG	8 cut(s)	146, 214, 426, 1205, 1238, 1268, 1298, 1358
AccBSI	CCGCTC	1 cut(s)	2226
AccI	GTMKAC	2 cut(s)	127, 2829
AciI	CCGC	7 cut(s)	1064, 1148, 1169, 1313, 2224, 2671, 2862
AcsI	RAATTY	4 cut(s)	652, 916, 1805, 2491
AcuI	CTGAAG	6 cut(s)	654, 1094, 1305, 1523, 1961, 2546
AfaI	GTAC	6 cut(s)	186, 516, 805, 1179, 1365, 1431
AhlI	ACTAGT	1 cut(s)	130
AjiI	CACGTC	1 cut(s)	974
AjuI	GAANNNNNNNTTGG	2 cut(s)	1596, 1628
Alw21I	GWGCWC	6 cut(s)	1879, 1973, 2128, 2331, 2452, 2609
Alw26I	GTCTC	3 cut(s)	403, 2570, 2607
Alw44I	GTGCAC	3 cut(s)	1875, 1969, 2124
AlwNI	CAGNNNCTG	8 cut(s)	146, 298, 1238, 1268, 1298, 1328, 1475, 2429
Ama87I	CYCGRG	3 cut(s)	607, 2378, 2463
AoxI	GGCC	7 cut(s)	610, 1049, 1247, 1277, 1307, 1376, 1892
ApaI	GGGCCC	1 cut(s)	614
ApaLI	GTGCAC	3 cut(s)	1875, 1969, 2124
ApeKI	GCWGC	5 cut(s)	782, 1211, 1451, 2243, 2252
ApoI	RAATTY	4 cut(s)	652, 916, 1805, 2491
ArsI	GACNNNNNNTTYG	6 cut(s)	278, 310, 1916, 1948, 2179, 2211
AseI	ATTAAT	1 cut(s)	1701
Asp700I	GAANNNNTTC	4 cut(s)	117, 222, 1809, 2076
Asp718I	GGTACC	1 cut(s)	514
AspA2I	CCTAGG	1 cut(s)	1373
AspLEI	GCGC	3 cut(s)	269, 580, 2891
AsuC2I	CCSGG	2 cut(s)	988, 2872
AsuHPI	GGTGA	4 cut(s)	358, 1493, 1640, 1981
AsuNHI	GCTAGC	1 cut(s)	1408
AvaI	CYCGRG	3 cut(s)	607, 2378, 2463
AvaII	GGWCC	9 cut(s)	572, 603, 1061, 1151, 1241, 1271, 1301, 1331, 2920
AvrII	CCTAGG	1 cut(s)	1373
AxyI	CCTNAGG	1 cut(s)	342
BaeGI	GKGCMC	4 cut(s)	614, 1879, 1973, 2128
BamHI	GGATCC	1 cut(s)	962
BanI	GGYRCC	2 cut(s)	514, 1831
BanII	GRGCYC	2 cut(s)	614, 854
BauI	CACGAG	1 cut(s)	2247
BbsI	GAAGAC	2 cut(s)	781, 1653
Bbv12I	GWGCWC	6 cut(s)	1879, 1973, 2128, 2331, 2452, 2609
BbvCI	CCTCAGC	1 cut(s)	510
BbvI	GCAGC	5 cut(s)	794, 1223, 1438, 2230, 2264
BceAI	ACGGC	1 cut(s)	839
BcgI	CGANNNNNNTGC	2 cut(s)	2359, 2393
BciVI	GTATCC	1 cut(s)	1023
BclI	TGATCA	3 cut(s)	81, 102, 1540
BcnI	CCSGG	2 cut(s)	988, 2872
BcoDI	GTCTC	3 cut(s)	403, 2570, 2607
BcuI	ACTAGT	1 cut(s)	130
BfaI	CTAG	9 cut(s)	131, 261, 591, 600, 1374, 1409, 1529, 2277, 2903
BfmI	CTRYAG	2 cut(s)	814, 1395
BfuI	GTATCC	1 cut(s)	1023
BglII	AGATCT	2 cut(s)	229, 2850
BisI	GCNGC	6 cut(s)	783, 1212, 1452, 2244, 2253, 2863
BlnI	CCTAGG	1 cut(s)	1373
BlsI	GCNGC	6 cut(s)	784, 1213, 1453, 2245, 2254, 2864
Bme18I	GGWCC	9 cut(s)	572, 603, 1061, 1151, 1241, 1271, 1301, 1331, 2920
BmeT110I	CYCGRG	3 cut(s)	607, 2378, 2463
BmgBI	CACGTC	1 cut(s)	974
BmiI	GGNNCC	9 cut(s)	516, 612, 964, 1152, 1250, 1280, 1310, 1833, 2757
BmrI	ACTGGG	2 cut(s)	202, 1678
BmtI	GCTAGC	1 cut(s)	1412
BmuI	ACTGGG	2 cut(s)	202, 1678
BpiI	GAAGAC	2 cut(s)	781, 1653
BplI	GAGNNNNNCTC	4 cut(s)	401, 433, 2230, 2262
BpmI	CTGGAG	8 cut(s)	423, 482, 903, 1215, 1245, 1275, 2369, 2631
Bpu10I	CCTNAGC	3 cut(s)	510, 1110, 1859
BpuEI	CTTGAG	2 cut(s)	2045, 2321
BpuMI	CCSGG	2 cut(s)	988, 2872
BsaBI	GATNNNNATC	1 cut(s)	2855
BsaI	GGTCTC	1 cut(s)	2570
BsaJI	CCNNGG	7 cut(s)	568, 606, 1244, 1274, 1304, 1373, 2623
BsaWI	WCCGGW	1 cut(s)	2265
Bse118I	RCCGGY	1 cut(s)	2049
Bse1I	ACTGG	7 cut(s)	151, 208, 303, 1582, 1684, 2092, 2614
Bse21I	CCTNAGG	1 cut(s)	342
Bse3DI	GCAATG	3 cut(s)	741, 1021, 2377
Bse8I	GATNNNNATC	1 cut(s)	2855
BseDI	CCNNGG	7 cut(s)	568, 606, 1244, 1274, 1304, 1373, 2623
BseGI	GGATG	9 cut(s)	337, 563, 977, 1007, 1031, 1664, 1926, 2413, 2647
BseJI	GATNNNNATC	1 cut(s)	2855
BseMI	GCAATG	3 cut(s)	741, 1021, 2377
BseNI	ACTGG	7 cut(s)	151, 208, 303, 1582, 1684, 2092, 2614
BseRI	GAGGAG	7 cut(s)	107, 1029, 1059, 1125, 1326, 1359, 1997
BseSI	GKGCMC	4 cut(s)	614, 1879, 1973, 2128
BseXI	GCAGC	5 cut(s)	794, 1223, 1438, 2230, 2264
BseYI	CCCAGC	1 cut(s)	689
BsgI	GTGCAG	5 cut(s)	335, 516, 1230, 2271, 2558
Bsh1285I	CGRYCG	1 cut(s)	1648
BshFI	GGCC	7 cut(s)	612, 1051, 1249, 1279, 1309, 1378, 1894
BshNI	GGYRCC	2 cut(s)	514, 1831
BsiEI	CGRYCG	1 cut(s)	1648
BsiHKAI	GWGCWC	6 cut(s)	1879, 1973, 2128, 2331, 2452, 2609
BsiHKCI	CYCGRG	3 cut(s)	607, 2378, 2463
BsiSI	CCGG	4 cut(s)	988, 2050, 2266, 2872
BslFI	GGGAC	2 cut(s)	433, 631
BsmAI	GTCTC	3 cut(s)	403, 2570, 2607
BsmFI	GGGAC	2 cut(s)	433, 631
BsmI	GAATGC	3 cut(s)	418, 2548, 2635
BsnI	GGCC	7 cut(s)	612, 1051, 1249, 1279, 1309, 1378, 1894
Bso31I	GGTCTC	1 cut(s)	2570
BsoBI	CYCGRG	3 cut(s)	607, 2378, 2463
Bsp120I	GGGCCC	1 cut(s)	610
Bsp1286I	GDGCHC	8 cut(s)	614, 854, 1879, 1973, 2128, 2331, 2452, 2609
Bsp19I	CCATGG	1 cut(s)	2623
BspACI	CCGC	7 cut(s)	1064, 1148, 1169, 1313, 2224, 2671, 2862
BspANI	GGCC	7 cut(s)	612, 1051, 1249, 1279, 1309, 1378, 1894
BspHI	TCATGA	1 cut(s)	2515
BspLI	GGNNCC	9 cut(s)	516, 612, 964, 1152, 1250, 1280, 1310, 1833, 2757
BspOI	GCTAGC	1 cut(s)	1412
BspQI	GCTCTTC	1 cut(s)	2319
BspT107I	GGYRCC	2 cut(s)	514, 1831
BspTNI	GGTCTC	1 cut(s)	2570
BsrBI	CCGCTC	1 cut(s)	2226
BsrDI	GCAATG	3 cut(s)	741, 1021, 2377
BsrFI	RCCGGY	1 cut(s)	2049
BsrI	ACTGG	7 cut(s)	151, 208, 303, 1582, 1684, 2092, 2614
BssAI	RCCGGY	1 cut(s)	2049
BssECI	CCNNGG	7 cut(s)	568, 606, 1244, 1274, 1304, 1373, 2623
BssSI	CACGAG	1 cut(s)	2247
BssT1I	CCWWGG	3 cut(s)	1304, 1373, 2623
Bst2BI	CACGAG	1 cut(s)	2247
Bst4CI	ACNGT	5 cut(s)	294, 766, 1905, 1947, 2431
Bst6I	CTCTTC	4 cut(s)	402, 1980, 2319, 2522
BstC8I	GCNNGC	6 cut(s)	1410, 1896, 2029, 2051, 2836, 2972
BstDSI	CCRYGG	1 cut(s)	2623
BstEII	GGTNACC	2 cut(s)	243, 1987
BstENI	CCTNNNNNAGG	1 cut(s)	534
BstF5I	GGATG	9 cut(s)	337, 563, 977, 1007, 1031, 1664, 1926, 2413, 2647
BstHHI	GCGC	3 cut(s)	269, 580, 2891
BstMAI	GTCTC	3 cut(s)	403, 2570, 2607
BstMCI	CGRYCG	1 cut(s)	1648
BstMWI	GCNNNNNNNGC	3 cut(s)	584, 2249, 2252
BstPI	GGTNACC	2 cut(s)	243, 1987
BstSFI	CTRYAG	2 cut(s)	814, 1395
BstSLI	GKGCMC	4 cut(s)	614, 1879, 1973, 2128
BstV1I	GCAGC	5 cut(s)	794, 1223, 1438, 2230, 2264
BstV2I	GAAGAC	2 cut(s)	781, 1653
BstX2I	RGATCY	6 cut(s)	229, 539, 962, 1574, 1672, 2850
BstYI	RGATCY	6 cut(s)	229, 539, 962, 1574, 1672, 2850
Bsu36I	CCTNAGG	1 cut(s)	342
BsuI	GTATCC	1 cut(s)	1023
BsuRI	GGCC	7 cut(s)	612, 1051, 1249, 1279, 1309, 1378, 1894
BtgI	CCRYGG	1 cut(s)	2623
BtgZI	GCGATG	1 cut(s)	1785
BtrI	CACGTC	1 cut(s)	974
BtsCI	GGATG	9 cut(s)	337, 563, 977, 1007, 1031, 1664, 1926, 2413, 2647
BtsI	GCAGTG	1 cut(s)	493
BtsIMutI	CAGTG	5 cut(s)	296, 493, 771, 2522, 2607
Cac8I	GCNNGC	6 cut(s)	1410, 1896, 2029, 2051, 2836, 2972
CaiI	CAGNNNCTG	8 cut(s)	146, 298, 1238, 1268, 1298, 1328, 1475, 2429
CciI	TCATGA	1 cut(s)	2515
CfoI	GCGC	3 cut(s)	269, 580, 2891
Cfr10I	RCCGGY	1 cut(s)	2049
CseI	GACGC	2 cut(s)	1427, 2269
Csp6I	GTAC	6 cut(s)	185, 515, 804, 1178, 1364, 1430
CviAII	CATG	8 cut(s)	1597, 2098, 2315, 2485, 2516, 2590, 2624, 2892
CviQI	GTAC	6 cut(s)	185, 515, 804, 1178, 1364, 1430
DraI	TTTAAA	1 cut(s)	1942
Eam1104I	CTCTTC	4 cut(s)	402, 1980, 2319, 2522
EarI	CTCTTC	4 cut(s)	402, 1980, 2319, 2522
EciI	GGCGGA	1 cut(s)	1158
Eco130I	CCWWGG	3 cut(s)	1304, 1373, 2623
Eco147I	AGGCCT	1 cut(s)	1051
Eco24I	GRGCYC	2 cut(s)	614, 854
Eco31I	GGTCTC	1 cut(s)	2570
Eco32I	GATATC	1 cut(s)	2557
Eco47I	GGWCC	9 cut(s)	572, 603, 1061, 1151, 1241, 1271, 1301, 1331, 2920
Eco57I	CTGAAG	6 cut(s)	654, 1094, 1305, 1523, 1961, 2546
Eco81I	CCTNAGG	1 cut(s)	342
Eco88I	CYCGRG	3 cut(s)	607, 2378, 2463
Eco91I	GGTNACC	2 cut(s)	243, 1987
EcoNI	CCTNNNNNAGG	1 cut(s)	534
EcoO109I	RGGNCCY	2 cut(s)	603, 611
EcoO65I	GGTNACC	2 cut(s)	243, 1987
EcoRI	GAATTC	2 cut(s)	1805, 2491
EcoRV	GATATC	1 cut(s)	2557
EcoT14I	CCWWGG	3 cut(s)	1304, 1373, 2623
EcoT38I	GRGCYC	2 cut(s)	614, 854
ErhI	CCWWGG	3 cut(s)	1304, 1373, 2623
FaeI	CATG	8 cut(s)	1600, 2101, 2318, 2488, 2519, 2593, 2627, 2895
FalI	AAGNNNNNCTT	4 cut(s)	1944, 1976, 2064, 2096
FaqI	GGGAC	2 cut(s)	433, 631
FatI	CATG	8 cut(s)	1596, 2097, 2314, 2484, 2515, 2589, 2623, 2891
FauI	CCCGC	3 cut(s)	1141, 1320, 2664
FbaI	TGATCA	3 cut(s)	81, 102, 1540
FblI	GTMKAC	2 cut(s)	127, 2829
Fnu4HI	GCNGC	6 cut(s)	783, 1212, 1452, 2244, 2253, 2863
FokI	GGATG	9 cut(s)	324, 550, 964, 994, 1038, 1651, 1913, 2420, 2654
FriOI	GRGCYC	2 cut(s)	614, 854
Fsp4HI	GCNGC	6 cut(s)	783, 1212, 1452, 2244, 2253, 2863
FspBI	CTAG	9 cut(s)	131, 261, 591, 600, 1374, 1409, 1529, 2277, 2903
GlaI	GCGC	3 cut(s)	268, 579, 2890
GluI	GCNGC	6 cut(s)	783, 1212, 1452, 2244, 2253, 2863
GsaI	CCCAGC	1 cut(s)	693
GsuI	CTGGAG	8 cut(s)	423, 482, 903, 1215, 1245, 1275, 2369, 2631
HaeIII	GGCC	7 cut(s)	612, 1051, 1249, 1279, 1309, 1378, 1894
HapII	CCGG	4 cut(s)	988, 2050, 2266, 2872
HgaI	GACGC	2 cut(s)	1427, 2269
HhaI	GCGC	3 cut(s)	269, 580, 2891
Hin1II	CATG	8 cut(s)	1600, 2101, 2318, 2488, 2519, 2593, 2627, 2895
Hin6I	GCGC	3 cut(s)	267, 578, 2889
HinP1I	GCGC	3 cut(s)	267, 578, 2889
HindIII	AAGCTT	1 cut(s)	2063
HinfI	GANTC	9 cut(s)	446, 878, 1604, 1658, 1720, 2003, 2586, 2719, 2952
HpaII	CCGG	4 cut(s)	988, 2050, 2266, 2872
HphI	GGTGA	4 cut(s)	358, 1493, 1640, 1981
Hpy166II	GTNNAC	9 cut(s)	128, 662, 1154, 1364, 1877, 1971, 2126, 2651, 2830
Hpy8I	GTNNAC	9 cut(s)	128, 662, 1154, 1364, 1877, 1971, 2126, 2651, 2830
HpyCH4III	ACNGT	5 cut(s)	294, 766, 1905, 1947, 2431
HpyCH4IV	ACGT	2 cut(s)	187, 973
HpyF10VI	GCNNNNNNNGC	3 cut(s)	584, 2249, 2252
HpySE526I	ACGT	2 cut(s)	187, 973
Hsp92II	CATG	8 cut(s)	1600, 2101, 2318, 2488, 2519, 2593, 2627, 2895
HspAI	GCGC	3 cut(s)	267, 578, 2889
KpnI	GGTACC	1 cut(s)	518
KroI	GCCGGC	1 cut(s)	2049
KroNI	GCCGGC	1 cut(s)	2051
Ksp22I	TGATCA	3 cut(s)	81, 102, 1540
LguI	GCTCTTC	1 cut(s)	2319
LmnI	GCTCC	8 cut(s)	501, 691, 1240, 1270, 1300, 1330, 1492, 2761
Lsp1109I	GCAGC	5 cut(s)	794, 1223, 1438, 2230, 2264
MaeI	CTAG	9 cut(s)	131, 261, 591, 600, 1374, 1409, 1529, 2277, 2903
MaeII	ACGT	2 cut(s)	187, 973
MaeIII	GTNAC	8 cut(s)	55, 243, 294, 754, 766, 1750, 1956, 1987
MbiI	CCGCTC	1 cut(s)	2226
MflI	RGATCY	6 cut(s)	229, 539, 962, 1574, 1672, 2850
MhlI	GDGCHC	8 cut(s)	614, 854, 1879, 1973, 2128, 2331, 2452, 2609
MlyI	GAGTC	3 cut(s)	455, 872, 1667
MmeI	TCCRAC	3 cut(s)	900, 1184, 1929
MroNI	GCCGGC	1 cut(s)	2049
MroXI	GAANNNNTTC	4 cut(s)	117, 222, 1809, 2076
MslI	CAYNNNNRTG	1 cut(s)	2628
MspA1I	CMGCKG	1 cut(s)	2862
MspI	CCGG	4 cut(s)	988, 2050, 2266, 2872
Mva1269I	GAATGC	3 cut(s)	418, 2548, 2635
MwoI	GCNNNNNNNGC	3 cut(s)	584, 2249, 2252
NaeI	GCCGGC	1 cut(s)	2051
NciI	CCSGG	2 cut(s)	988, 2872
NcoI	CCATGG	1 cut(s)	2623
NgoMIV	GCCGGC	1 cut(s)	2049
NheI	GCTAGC	1 cut(s)	1408
NlaIII	CATG	8 cut(s)	1600, 2101, 2318, 2488, 2519, 2593, 2627, 2895
NlaIV	GGNNCC	9 cut(s)	516, 612, 964, 1152, 1250, 1280, 1310, 1833, 2757
NmeAIII	GCCGAG	2 cut(s)	1225, 1255
NmuCI	GTSAC	4 cut(s)	294, 766, 1750, 1987
PaeR7I	CTCGAG	1 cut(s)	2378
PagI	TCATGA	1 cut(s)	2515
PceI	AGGCCT	1 cut(s)	1051
PciSI	GCTCTTC	1 cut(s)	2319
PctI	GAATGC	3 cut(s)	418, 2548, 2635
PdiI	GCCGGC	1 cut(s)	2051
PdmI	GAANNNNTTC	4 cut(s)	117, 222, 1809, 2076
PfeI	GAWTC	6 cut(s)	1604, 1720, 2003, 2586, 2719, 2952
PflMI	CCANNNNNTGG	8 cut(s)	146, 214, 426, 1205, 1238, 1268, 1298, 1358
PfoI	TCCNGGA	1 cut(s)	1042
PkrI	GCNGC	6 cut(s)	784, 1213, 1453, 2245, 2254, 2864
Ple19I	CGATCG	1 cut(s)	1648
PleI	GAGTC	3 cut(s)	454, 872, 1666
PpsI	GAGTC	3 cut(s)	454, 872, 1666
PpuMI	RGGWCCY	1 cut(s)	603
PshBI	ATTAAT	1 cut(s)	1701
Psp5II	RGGWCCY	1 cut(s)	603
PspEI	GGTNACC	2 cut(s)	243, 1987
PspFI	CCCAGC	1 cut(s)	689
PspN4I	GGNNCC	9 cut(s)	516, 612, 964, 1152, 1250, 1280, 1310, 1833, 2757
PspOMI	GGGCCC	1 cut(s)	610
PspPPI	RGGWCCY	1 cut(s)	603
PstNI	CAGNNNCTG	8 cut(s)	146, 298, 1238, 1268, 1298, 1328, 1475, 2429
PsuI	RGATCY	6 cut(s)	229, 539, 962, 1574, 1672, 2850
PvuI	CGATCG	1 cut(s)	1648
RsaI	GTAC	6 cut(s)	186, 516, 805, 1179, 1365, 1431
RsaNI	GTAC	6 cut(s)	185, 515, 804, 1178, 1364, 1430
RseI	CAYNNNNRTG	1 cut(s)	2628
SapI	GCTCTTC	1 cut(s)	2319
SatI	GCNGC	6 cut(s)	783, 1212, 1452, 2244, 2253, 2863
SchI	GAGTC	3 cut(s)	455, 872, 1667
SduI	GDGCHC	8 cut(s)	614, 854, 1879, 1973, 2128, 2331, 2452, 2609
SfcI	CTRYAG	2 cut(s)	814, 1395
Sfr274I	CTCGAG	1 cut(s)	2378
SinI	GGWCC	9 cut(s)	572, 603, 1061, 1151, 1241, 1271, 1301, 1331, 2920
SlaI	CTCGAG	1 cut(s)	2378
SmiMI	CAYNNNNRTG	1 cut(s)	2628
SmlI	CTYRAG	3 cut(s)	2060, 2300, 2378
SmoI	CTYRAG	3 cut(s)	2060, 2300, 2378
SpeI	ACTAGT	1 cut(s)	130
SseBI	AGGCCT	1 cut(s)	1051
SsiI	CCGC	7 cut(s)	1064, 1148, 1169, 1313, 2224, 2671, 2862
SspMI	CTAG	9 cut(s)	131, 261, 591, 600, 1374, 1409, 1529, 2277, 2903
StuI	AGGCCT	1 cut(s)	1051
StyI	CCWWGG	3 cut(s)	1304, 1373, 2623
TaaI	ACNGT	5 cut(s)	294, 766, 1905, 1947, 2431
TaiI	ACGT	2 cut(s)	190, 976
TaqI	TCGA	6 cut(s)	656, 1414, 1457, 1923, 2379, 2938
TatI	WGTACW	1 cut(s)	803
TauI	GCSGC	1 cut(s)	2865
TfiI	GAWTC	6 cut(s)	1604, 1720, 2003, 2586, 2719, 2952
TscAI	CASTG	5 cut(s)	303, 493, 771, 2529, 2614
TseFI	GTSAC	4 cut(s)	294, 766, 1750, 1987
TseI	GCWGC	5 cut(s)	782, 1211, 1451, 2243, 2252
Tsp45I	GTSAC	4 cut(s)	294, 766, 1750, 1987
TspGWI	ACGGA	3 cut(s)	383, 1038, 2558
TspRI	CASTG	5 cut(s)	303, 493, 771, 2529, 2614
Van91I	CCANNNNNTGG	8 cut(s)	146, 214, 426, 1205, 1238, 1268, 1298, 1358
VneI	GTGCAC	3 cut(s)	1875, 1969, 2124
VpaK11BI	GGWCC	9 cut(s)	572, 603, 1061, 1151, 1241, 1271, 1301, 1331, 2920
VspI	ATTAAT	1 cut(s)	1701
XagI	CCTNNNNNAGG	1 cut(s)	534
XapI	RAATTY	4 cut(s)	652, 916, 1805, 2491
XhoI	CTCGAG	1 cut(s)	2378
XmaJI	CCTAGG	1 cut(s)	1373
XmiI	GTMKAC	2 cut(s)	127, 2829
XmnI	GAANNNNTTC	4 cut(s)	117, 222, 1809, 2076
XspI	CTAG	9 cut(s)	131, 261, 591, 600, 1374, 1409, 1529, 2277, 2903

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.