Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004133

Physical Location & Seq

Genomic Coordinates Reverse (-)

31515005 .. 31521457

Gene Structure 6453 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ31590

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2838 bp

ATGGGTCTTATGAGGACAAGTCGTTTCGTAGTTTTGGTTACTCTGCTTTGTGTTTCAGCTTTGATCAGCTCAGAGGAGAGAGTGATCACAGAAGAAGTGTTTCTCAGTAGACTAGTTGATCCAGCAACTGGAAAGATTGATGGAGATATGGCACAGCTGTTATGGGTACGTTGCAAGGTAGATTTGACCCATTTGGTGGAAACTATTCAAGATCTTCACTTATGGTTACCAGAGGAAACATATATTAGTGCAGATGAAATTAGTTCAAAAAGACAGTCACTGGAAGAAGTAAATGTGCAGAAACTTATTAGTGTCCTGCATCCTCAGGTGAAACAAACTCTTTCAGATTGTTTCAGAAAGAATAATCTCTTTTTCCGTGTCTCTGGAAAAGAGAATGCCTCCAAGATTTGGTATGCCAAGTATATTGAGTCCCTATTTCCCAGACCTGTTCCAAGAAGGAATATGGGCAGTGAATTGCTCCAGACCTCTGCTGAGGTACCTTCTCCTGCCCCTGCACCAGGATCTTCTAAATTCAGTCCAGCATCATCCCCTGGTCCTGCACAAGGATCATTTTTTCCTTCCATGCCCCGAAATTCGAGTTCACAACCTTCAGTTAGTGAACCAGCTCCCAGCACCATTATACAGATAACTAAGAAAAAGACTGACCATAAACCAATTATCATTGCAGTTGTTGTAACTGCAACAGTGACATTTGTTGTTGCAGCAGTCTTCTTTTTATGCTGTACTAAAATCTGTAGGACACGGCGTAAAGATAGAAAAAATGATGAGAGCCCCCTTCTTTGCCTGAGTAAATCCGACTCTGGAGGTTCTTCTTACAAGTCTTATCCTTTGGAAAATTCAATAAAAGGAGAGAAGATTGAGCATCAATCATTGGAATTAGGATCCATTGGACGTGCATCCAAATCCCGGTATGAAGTGTTTGAGGCATCCAGCAATGGGAACGGATGGATACCACCTCCTCCTGGAAGGCCTCCTAATGGACCGCCTCCTCTGAAGCCCCCTCCTGGCAGGGCAAATCCTCTCCCTCCTGAGCCACCTTCTTCTTTTAAGCCTCCTCCTGGCAGGGCGGGTCCTCCTCCAACCCCTCCGCCTCCTGTACCACCTCCCACTTTGAAACCATCTGGTGGTGCAGCCCCTCCCCCACCACCTCCAGCTCCTGGTCCTCGGCCCCCACCATCTCCAGCTCCTGGTCCTCGCCCCCCACCACCTTCAGCTCCTGGTCCTCCTCCCCCACCACTTCCAAAGATTGGTGTACCTCCTCCTAGGCCACCTCCATCAATGCCTATAGGTTCTAAGCTAGCTCGACCTCCACCATTTGCACCAAAGCGTCCATCAAATGCTGCTTCGAGTGATGGCTCAGAGGCTGATGGTGATGCTCCTAAAACCAAGCTGAAGCCCTTTTTTTGGGATAAGGTTCTAGCAAACCCTGATCATTCAATGGTGTGGCATCAGATTAAATCAGGATCTTTCCAGTTTGATGAGAACATGATTGAATCTCTGTTTGGGTATAATGCTGGTGATAAAAACAAAAACGATCGTAAGAAGGAGTCTTCATCCCAAGATCCTACACCCCAGTTCATTCAACTTATTAATCCCAAAAAGGCACAGAATCTATCAATTCTTCTCCGAGCTTTGAATGTGACAATAGAAGAAGTCTGCGATGCAATTTGTGAAGGAAATGAGCTTCCCATTGAATTCGTTCAAACTTTGTTGAAGATGGCACCAACACAAGAAGAAGAACTAAAGCTCAGGGTGTTCGATGGTGCACTTTCTCAACTTGGGCCTGCTGAACGGTTCTTAAAAGGCTTAATCGACATCCCTTTTGCCTTTAAACGGTTGGAAGCCTTACTTTTTATGTGCACTCTTCAGGAGGAGGTCACCAACCTTAAAGAATCCTTCGCAACCTTAGAGGTTGCTTGCAAGGAACTCAGAAACAGCCGGCTTTTCCTCAAGCTTTTAGAAGCTGTTCTTAAAACTGGCAATCGCATGAATGATGGAACATTTCGTGGTGGTGCACAGGCATTTAAGCTGGACACACTCTTGAAATTGTCAGATGTAAAGGGAACAGATGGCAAGACAACTCTTTTGCACTTTGTTGTTCAGGAAATAATCCGCTCTGAGGGTGTGAGAGCTGCTCGTGCAGCAAAAGAGAACCGGAGTTTCTCTAGCGTCAAAACAGATGATCTCCTTGAGGAAACTTCCCATGACACAGAAGAGCACTATTGTAATCTTGGTCTGGAGAAAGTATCAGGTTTAAGCAATGAACTCGAGAATGTAAAAAAAGCGTCAATTTTGGATGCTGATAGCTTAACAGGAACTGTTGCCAAACTTGGAAGTGCTCTGGTAAAAGCCCGAGATTTTCTGAACTCAGACATGAAGAAGTCAGGGGAAGAAAGTGGTTTTCATGAAACACTGAAGAGTTTTGTGCAGAATGCTGATGTTGATATCAGGGGTCTCCATGAGGAAGAAAAGAGAATCATGGCTCTGGTAAAGAGCACTGGAGACTATTTCCATGGGAATGCAGGGAAGGATGAGGGTTTACATTTGTTTGTTGTTGTGCGGGATTTTTTAATAATTTTAGATAAGGTATGCAAAGAAGTGAGATTGAATCCAAAAAAGTTCACAAAGGTTCAGAAAAAGGAGGCACCTTCCTCTGATCCCCACCAGCCTCCTACAACGCCATCTGCCTCTGATCCCCACCAGCCTCCTTCTCCTGGTCTACGCCAGCCTCCTTTTCCAGATCTCCATCAGCGGCTTTTCCCGGCAATCAAGGATCGGCGCATGGACAATTCTAGCTCAGATGATGAAGGTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007010 GO:0007015 GO:0007275 GO:0008064 GO:0008092 GO:0008150 GO:0008154 GO:0009524 GO:0009653 GO:0009791 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0010638 GO:0016043 GO:0022414 GO:0022607 GO:0030029 GO:0030036 GO:0030041 GO:0030312 GO:0030832 GO:0030833 GO:0030838 GO:0031334 GO:0032271 GO:0032273 GO:0032501 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0034622 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0045010 GO:0048316 GO:0048317 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051258 GO:0051493 GO:0051495 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0090698 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04320 map04320

Pfam Domains

Protein Families

FH2

Protein Analysis

945

Amino Acids

103.33

Weight (kDa)

8.75

Isoelectric Point (pI)

54.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	465 - 866	8.7e-110	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0004133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54650 AT5G54650
fragaria_vesca	FvH4_3g21670 FvH4_3g21670 FvH4_3g21670 FvH4_3g21670 FvH4_3g21670 FvH4_3g21670
malus_domestica	MD03G1213400.v1.1 MD11G1228300.v1.1
prunus_persica	Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1
pyrus_communis	pycom03g16200 pycom11g20090
rosa_chinensis	RchiOBHm_Chr5g0037151
rosa_laevigata	RLG00000033762
rosa_multiflora	Rmu_ssc0000448.1_g000003
rosa_roxburghii	Rroxscaffold_1G00043830
rosa_rugosa	Rorug05G0161100 Rorug05G0161100 Rorug05G0161200
rosa_samantha	Rh5AG252800 Rh5BG254700 Rh5CG287200 Rh5DG263200 Rh6CG204900
rosa_wichuraiana	Rw5G023330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	496
AccB1I	GGYRCC	3 cut(s)	496, 1741, 2665
AccB7I	CCANNNNNTGG	7 cut(s)	128, 196, 408, 1145, 1178, 1208, 1268
AccBSI	CCGCTC	1 cut(s)	2136
AccI	GTMKAC	2 cut(s)	109, 2740
AciI	CCGC	6 cut(s)	1004, 1088, 1109, 2134, 2581, 2773
AcsI	RAATTY	4 cut(s)	530, 592, 856, 1715
AcuI	CTGAAG	6 cut(s)	594, 1034, 1215, 1433, 1871, 2456
AfaI	GTAC	5 cut(s)	168, 498, 745, 1119, 1275
AhlI	ACTAGT	1 cut(s)	112
AjiI	CACGTC	1 cut(s)	914
AjnI	CCWGG	9 cut(s)	517, 550, 982, 1024, 1078, 1177, 1207, 1237, 2734
AjuI	GAANNNNNNNTTGG	2 cut(s)	1506, 1538
Alw21I	GWGCWC	6 cut(s)	1789, 1883, 2038, 2241, 2362, 2519
Alw26I	GTCTC	3 cut(s)	385, 2480, 2517
Alw44I	GTGCAC	3 cut(s)	1785, 1879, 2034
AlwNI	CAGNNNCTG	7 cut(s)	128, 280, 1178, 1208, 1238, 1385, 2339
Ama87I	CYCGRG	2 cut(s)	2288, 2373
AoxI	GGCC	4 cut(s)	989, 1187, 1286, 1802
ApaLI	GTGCAC	3 cut(s)	1785, 1879, 2034
ApeKI	GCWGC	5 cut(s)	722, 1151, 1361, 2153, 2162
ApoI	RAATTY	4 cut(s)	530, 592, 856, 1715
ArsI	GACNNNNNNTTYG	6 cut(s)	260, 292, 1826, 1858, 2089, 2121
AseI	ATTAAT	1 cut(s)	1611
Asp700I	GAANNNNTTC	4 cut(s)	99, 204, 1719, 1986
Asp718I	GGTACC	1 cut(s)	496
AspA2I	CCTAGG	1 cut(s)	1283
AspLEI	GCGC	1 cut(s)	2802
AspS9I	GGNCC	9 cut(s)	554, 1001, 1091, 1181, 1188, 1211, 1241, 1802, 2831
AsuC2I	CCSGG	2 cut(s)	928, 2783
AsuHPI	GGTGA	4 cut(s)	340, 1403, 1550, 1891
AsuNHI	GCTAGC	1 cut(s)	1318
AvaI	CYCGRG	2 cut(s)	2288, 2373
AvaII	GGWCC	7 cut(s)	554, 1001, 1091, 1181, 1211, 1241, 2831
AvrII	CCTAGG	1 cut(s)	1283
AxyI	CCTNAGG	1 cut(s)	324
BaeGI	GKGCMC	3 cut(s)	1789, 1883, 2038
BamHI	GGATCC	1 cut(s)	902
BanI	GGYRCC	3 cut(s)	496, 1741, 2665
BanII	GRGCYC	1 cut(s)	794
BauI	CACGAG	1 cut(s)	2157
BbsI	GAAGAC	2 cut(s)	721, 1563
Bbv12I	GWGCWC	6 cut(s)	1789, 1883, 2038, 2241, 2362, 2519
BbvCI	CCTCAGC	1 cut(s)	492
BbvI	GCAGC	5 cut(s)	734, 1163, 1348, 2140, 2174
BceAI	ACGGC	1 cut(s)	779
BcgI	CGANNNNNNTGC	2 cut(s)	2269, 2303
BciT130I	CCWGG	9 cut(s)	519, 552, 984, 1026, 1080, 1179, 1209, 1239, 2736
BciVI	GTATCC	1 cut(s)	963
BclI	TGATCA	3 cut(s)	63, 84, 1450
BcnI	CCSGG	2 cut(s)	928, 2783
BcoDI	GTCTC	3 cut(s)	385, 2480, 2517
BcuI	ACTAGT	1 cut(s)	112
BfaI	CTAG	6 cut(s)	113, 1284, 1319, 1439, 2187, 2814
BfmI	CTRYAG	2 cut(s)	754, 1305
BfuI	GTATCC	1 cut(s)	963
BglII	AGATCT	2 cut(s)	211, 2761
BisI	GCNGC	6 cut(s)	723, 1152, 1362, 2154, 2163, 2774
BlnI	CCTAGG	1 cut(s)	1283
BlsI	GCNGC	6 cut(s)	724, 1153, 1363, 2155, 2164, 2775
Bme18I	GGWCC	7 cut(s)	554, 1001, 1091, 1181, 1211, 1241, 2831
BmeT110I	CYCGRG	2 cut(s)	2288, 2373
BmgBI	CACGTC	1 cut(s)	914
BmgT120I	GGNCC	9 cut(s)	554, 1001, 1091, 1181, 1188, 1211, 1241, 1802, 2831
BmiI	GGNNCC	6 cut(s)	498, 904, 1092, 1190, 1743, 2667
BmrI	ACTGGG	1 cut(s)	1588
BmsI	GCATC	9 cut(s)	328, 551, 892, 926, 956, 1384, 1477, 1672, 2308
BmtI	GCTAGC	1 cut(s)	1322
BmuI	ACTGGG	1 cut(s)	1588
BpiI	GAAGAC	2 cut(s)	721, 1563
BplI	GAGNNNNNCTC	4 cut(s)	383, 415, 2140, 2172
BpmI	CTGGAG	6 cut(s)	464, 843, 1155, 1185, 2279, 2541
Bpu10I	CCTNAGC	3 cut(s)	492, 1050, 1769
BpuEI	CTTGAG	2 cut(s)	1955, 2231
BpuMI	CCSGG	2 cut(s)	928, 2783
BsaBI	GATNNNNATC	1 cut(s)	2766
BsaI	GGTCTC	1 cut(s)	2480
BsaJI	CCNNGG	4 cut(s)	550, 1184, 1283, 2533
BsaWI	WCCGGW	1 cut(s)	2175
Bse118I	RCCGGY	1 cut(s)	1959
Bse1I	ACTGG	6 cut(s)	133, 285, 1492, 1594, 2002, 2524
Bse21I	CCTNAGG	1 cut(s)	324
Bse3DI	GCAATG	3 cut(s)	681, 961, 2287
Bse8I	GATNNNNATC	1 cut(s)	2766
BseBI	CCWGG	9 cut(s)	519, 552, 984, 1026, 1080, 1179, 1209, 1239, 2736
BseDI	CCNNGG	4 cut(s)	550, 1184, 1283, 2533
BseGI	GGATG	9 cut(s)	319, 545, 917, 947, 971, 1574, 1836, 2323, 2557
BseJI	GATNNNNATC	1 cut(s)	2766
BseMI	GCAATG	3 cut(s)	681, 961, 2287
BseNI	ACTGG	6 cut(s)	133, 285, 1492, 1594, 2002, 2524
BseRI	GAGGAG	8 cut(s)	89, 969, 999, 1065, 1086, 1236, 1269, 1907
BseSI	GKGCMC	3 cut(s)	1789, 1883, 2038
BseXI	GCAGC	5 cut(s)	734, 1163, 1348, 2140, 2174
BseYI	CCCAGC	1 cut(s)	629
BsgI	GTGCAG	7 cut(s)	270, 317, 498, 543, 1170, 2181, 2468
Bsh1285I	CGRYCG	1 cut(s)	1558
BshFI	GGCC	4 cut(s)	991, 1189, 1288, 1804
BshNI	GGYRCC	3 cut(s)	496, 1741, 2665
BsiEI	CGRYCG	1 cut(s)	1558
BsiHKAI	GWGCWC	6 cut(s)	1789, 1883, 2038, 2241, 2362, 2519
BsiHKCI	CYCGRG	2 cut(s)	2288, 2373
BsiSI	CCGG	4 cut(s)	928, 1960, 2176, 2783
BslFI	GGGAC	1 cut(s)	415
BsmAI	GTCTC	3 cut(s)	385, 2480, 2517
BsmFI	GGGAC	1 cut(s)	415
BsmI	GAATGC	3 cut(s)	400, 2458, 2545
BsnI	GGCC	4 cut(s)	991, 1189, 1288, 1804
Bso31I	GGTCTC	1 cut(s)	2480
BsoBI	CYCGRG	2 cut(s)	2288, 2373
Bsp1286I	GDGCHC	7 cut(s)	794, 1789, 1883, 2038, 2241, 2362, 2519
Bsp19I	CCATGG	1 cut(s)	2533
BspACI	CCGC	6 cut(s)	1004, 1088, 1109, 2134, 2581, 2773
BspANI	GGCC	4 cut(s)	991, 1189, 1288, 1804
BspHI	TCATGA	1 cut(s)	2425
BspLI	GGNNCC	6 cut(s)	498, 904, 1092, 1190, 1743, 2667
BspOI	GCTAGC	1 cut(s)	1322
BspQI	GCTCTTC	1 cut(s)	2229
BspT107I	GGYRCC	3 cut(s)	496, 1741, 2665
BspTNI	GGTCTC	1 cut(s)	2480
BsrBI	CCGCTC	1 cut(s)	2136
BsrDI	GCAATG	3 cut(s)	681, 961, 2287
BsrFI	RCCGGY	1 cut(s)	1959
BsrI	ACTGG	6 cut(s)	133, 285, 1492, 1594, 2002, 2524
BssAI	RCCGGY	1 cut(s)	1959
BssECI	CCNNGG	4 cut(s)	550, 1184, 1283, 2533
BssSI	CACGAG	1 cut(s)	2157
BssT1I	CCWWGG	2 cut(s)	1283, 2533
Bst2BI	CACGAG	1 cut(s)	2157
Bst2UI	CCWGG	9 cut(s)	519, 552, 984, 1026, 1080, 1179, 1209, 1239, 2736
Bst4CI	ACNGT	5 cut(s)	276, 706, 1815, 1857, 2341
Bst6I	CTCTTC	3 cut(s)	1890, 2229, 2432
BstC8I	GCNNGC	5 cut(s)	1320, 1806, 1939, 1961, 2747
BstDSI	CCRYGG	1 cut(s)	2533
BstEII	GGTNACC	2 cut(s)	225, 1897
BstENI	CCTNNNNNAGG	2 cut(s)	516, 561
BstF5I	GGATG	9 cut(s)	319, 545, 917, 947, 971, 1574, 1836, 2323, 2557
BstHHI	GCGC	1 cut(s)	2802
BstMAI	GTCTC	3 cut(s)	385, 2480, 2517
BstMCI	CGRYCG	1 cut(s)	1558
BstMWI	GCNNNNNNNGC	2 cut(s)	2159, 2162
BstNI	CCWGG	9 cut(s)	519, 552, 984, 1026, 1080, 1179, 1209, 1239, 2736
BstPI	GGTNACC	2 cut(s)	225, 1897
BstSFI	CTRYAG	2 cut(s)	754, 1305
BstSLI	GKGCMC	3 cut(s)	1789, 1883, 2038
BstV1I	GCAGC	5 cut(s)	734, 1163, 1348, 2140, 2174
BstV2I	GAAGAC	2 cut(s)	721, 1563
BstX2I	RGATCY	6 cut(s)	211, 521, 902, 1484, 1582, 2761
BstYI	RGATCY	6 cut(s)	211, 521, 902, 1484, 1582, 2761
Bsu36I	CCTNAGG	1 cut(s)	324
BsuI	GTATCC	1 cut(s)	963
BsuRI	GGCC	4 cut(s)	991, 1189, 1288, 1804
BtgI	CCRYGG	1 cut(s)	2533
BtgZI	GCGATG	1 cut(s)	1695
BtrI	CACGTC	1 cut(s)	914
BtsCI	GGATG	9 cut(s)	319, 545, 917, 947, 971, 1574, 1836, 2323, 2557
BtsI	GCAGTG	1 cut(s)	475
BtsIMutI	CAGTG	5 cut(s)	278, 475, 711, 2432, 2517
Cac8I	GCNNGC	5 cut(s)	1320, 1806, 1939, 1961, 2747
CaiI	CAGNNNCTG	7 cut(s)	128, 280, 1178, 1208, 1238, 1385, 2339
CciI	TCATGA	1 cut(s)	2425
CfoI	GCGC	1 cut(s)	2802
Cfr10I	RCCGGY	1 cut(s)	1959
Cfr13I	GGNCC	9 cut(s)	554, 1001, 1091, 1181, 1188, 1211, 1241, 1802, 2831
CseI	GACGC	3 cut(s)	1337, 2179, 2295
Csp6I	GTAC	5 cut(s)	167, 497, 744, 1118, 1274
CviQI	GTAC	5 cut(s)	167, 497, 744, 1118, 1274
DraI	TTTAAA	1 cut(s)	1852
Eam1104I	CTCTTC	3 cut(s)	1890, 2229, 2432
EarI	CTCTTC	3 cut(s)	1890, 2229, 2432
EciI	GGCGGA	1 cut(s)	1098
Eco130I	CCWWGG	2 cut(s)	1283, 2533
Eco147I	AGGCCT	1 cut(s)	991
Eco24I	GRGCYC	1 cut(s)	794
Eco31I	GGTCTC	1 cut(s)	2480
Eco32I	GATATC	1 cut(s)	2467
Eco47I	GGWCC	7 cut(s)	554, 1001, 1091, 1181, 1211, 1241, 2831
Eco57I	CTGAAG	6 cut(s)	594, 1034, 1215, 1433, 1871, 2456
Eco81I	CCTNAGG	1 cut(s)	324
Eco88I	CYCGRG	2 cut(s)	2288, 2373
Eco91I	GGTNACC	2 cut(s)	225, 1897
EcoNI	CCTNNNNNAGG	2 cut(s)	516, 561
EcoO109I	RGGNCCY	1 cut(s)	1091
EcoO65I	GGTNACC	2 cut(s)	225, 1897
EcoRI	GAATTC	1 cut(s)	1715
EcoRII	CCWGG	9 cut(s)	517, 550, 982, 1024, 1078, 1177, 1207, 1237, 2734
EcoRV	GATATC	1 cut(s)	2467
EcoT14I	CCWWGG	2 cut(s)	1283, 2533
EcoT38I	GRGCYC	1 cut(s)	794
ErhI	CCWWGG	2 cut(s)	1283, 2533
FalI	AAGNNNNNCTT	4 cut(s)	1854, 1886, 1974, 2006
FaqI	GGGAC	1 cut(s)	415
FauI	CCCGC	2 cut(s)	1081, 2574
FbaI	TGATCA	3 cut(s)	63, 84, 1450
FblI	GTMKAC	2 cut(s)	109, 2740
Fnu4HI	GCNGC	6 cut(s)	723, 1152, 1362, 2154, 2163, 2774
FokI	GGATG	9 cut(s)	306, 532, 904, 934, 978, 1561, 1823, 2330, 2564
FriOI	GRGCYC	1 cut(s)	794
Fsp4HI	GCNGC	6 cut(s)	723, 1152, 1362, 2154, 2163, 2774
FspBI	CTAG	6 cut(s)	113, 1284, 1319, 1439, 2187, 2814
GlaI	GCGC	1 cut(s)	2801
GluI	GCNGC	6 cut(s)	723, 1152, 1362, 2154, 2163, 2774
GsaI	CCCAGC	1 cut(s)	633
GsuI	CTGGAG	6 cut(s)	464, 843, 1155, 1185, 2279, 2541
HaeIII	GGCC	4 cut(s)	991, 1189, 1288, 1804
HapII	CCGG	4 cut(s)	928, 1960, 2176, 2783
HgaI	GACGC	3 cut(s)	1337, 2179, 2295
HhaI	GCGC	1 cut(s)	2802
Hin6I	GCGC	1 cut(s)	2800
HinP1I	GCGC	1 cut(s)	2800
HindIII	AAGCTT	1 cut(s)	1973
HinfI	GANTC	8 cut(s)	428, 818, 1514, 1568, 1630, 1913, 2496, 2629
HpaII	CCGG	4 cut(s)	928, 1960, 2176, 2783
HphI	GGTGA	4 cut(s)	340, 1403, 1550, 1891
HpyCH4III	ACNGT	5 cut(s)	276, 706, 1815, 1857, 2341
HpyCH4IV	ACGT	2 cut(s)	169, 913
HpyF10VI	GCNNNNNNNGC	2 cut(s)	2159, 2162
HpySE526I	ACGT	2 cut(s)	169, 913
HspAI	GCGC	1 cut(s)	2800
KpnI	GGTACC	1 cut(s)	500
KroI	GCCGGC	1 cut(s)	1959
KroNI	GCCGGC	1 cut(s)	1961
Ksp22I	TGATCA	3 cut(s)	63, 84, 1450
LguI	GCTCTTC	1 cut(s)	2229
LmnI	GCTCC	6 cut(s)	483, 631, 1180, 1210, 1240, 1402
Lsp1109I	GCAGC	5 cut(s)	734, 1163, 1348, 2140, 2174
LweI	GCATC	9 cut(s)	328, 551, 892, 926, 956, 1384, 1477, 1672, 2308
MaeI	CTAG	6 cut(s)	113, 1284, 1319, 1439, 2187, 2814
MaeII	ACGT	2 cut(s)	169, 913
MaeIII	GTNAC	7 cut(s)	37, 225, 276, 694, 706, 1660, 1897
MbiI	CCGCTC	1 cut(s)	2136
MflI	RGATCY	6 cut(s)	211, 521, 902, 1484, 1582, 2761
MhlI	GDGCHC	7 cut(s)	794, 1789, 1883, 2038, 2241, 2362, 2519
MlyI	GAGTC	3 cut(s)	437, 812, 1577
MmeI	TCCRAC	3 cut(s)	840, 1124, 1839
MroNI	GCCGGC	1 cut(s)	1959
MroXI	GAANNNNTTC	4 cut(s)	99, 204, 1719, 1986
MslI	CAYNNNNRTG	1 cut(s)	2538
MspA1I	CMGCKG	2 cut(s)	157, 2773
MspI	CCGG	4 cut(s)	928, 1960, 2176, 2783
Mva1269I	GAATGC	3 cut(s)	400, 2458, 2545
MvaI	CCWGG	9 cut(s)	519, 552, 984, 1026, 1080, 1179, 1209, 1239, 2736
MwoI	GCNNNNNNNGC	2 cut(s)	2159, 2162
NaeI	GCCGGC	1 cut(s)	1961
NciI	CCSGG	2 cut(s)	928, 2783
NcoI	CCATGG	1 cut(s)	2533
NgoMIV	GCCGGC	1 cut(s)	1959
NheI	GCTAGC	1 cut(s)	1318
NlaIV	GGNNCC	6 cut(s)	498, 904, 1092, 1190, 1743, 2667
NmeAIII	GCCGAG	1 cut(s)	1165
NmuCI	GTSAC	4 cut(s)	276, 706, 1660, 1897
PaeR7I	CTCGAG	1 cut(s)	2288
PagI	TCATGA	1 cut(s)	2425
PceI	AGGCCT	1 cut(s)	991
PciSI	GCTCTTC	1 cut(s)	2229
PctI	GAATGC	3 cut(s)	400, 2458, 2545
PdiI	GCCGGC	1 cut(s)	1961
PdmI	GAANNNNTTC	4 cut(s)	99, 204, 1719, 1986
PfeI	GAWTC	5 cut(s)	1514, 1630, 1913, 2496, 2629
PflMI	CCANNNNNTGG	7 cut(s)	128, 196, 408, 1145, 1178, 1208, 1268
PfoI	TCCNGGA	1 cut(s)	982
PkrI	GCNGC	6 cut(s)	724, 1153, 1363, 2155, 2164, 2775
Ple19I	CGATCG	1 cut(s)	1558
PleI	GAGTC	3 cut(s)	436, 812, 1576
PpsI	GAGTC	3 cut(s)	436, 812, 1576
PpuMI	RGGWCCY	1 cut(s)	1091
PshBI	ATTAAT	1 cut(s)	1611
Psp5II	RGGWCCY	1 cut(s)	1091
Psp6I	CCWGG	9 cut(s)	517, 550, 982, 1024, 1078, 1177, 1207, 1237, 2734
PspEI	GGTNACC	2 cut(s)	225, 1897
PspFI	CCCAGC	1 cut(s)	629
PspGI	CCWGG	9 cut(s)	517, 550, 982, 1024, 1078, 1177, 1207, 1237, 2734
PspN4I	GGNNCC	6 cut(s)	498, 904, 1092, 1190, 1743, 2667
PspPI	GGNCC	9 cut(s)	554, 1001, 1091, 1181, 1188, 1211, 1241, 1802, 2831
PspPPI	RGGWCCY	1 cut(s)	1091
PstNI	CAGNNNCTG	7 cut(s)	128, 280, 1178, 1208, 1238, 1385, 2339
PsuI	RGATCY	6 cut(s)	211, 521, 902, 1484, 1582, 2761
PvuI	CGATCG	1 cut(s)	1558
PvuII	CAGCTG	1 cut(s)	157
RsaI	GTAC	5 cut(s)	168, 498, 745, 1119, 1275
RsaNI	GTAC	5 cut(s)	167, 497, 744, 1118, 1274
RseI	CAYNNNNRTG	1 cut(s)	2538
SapI	GCTCTTC	1 cut(s)	2229
SatI	GCNGC	6 cut(s)	723, 1152, 1362, 2154, 2163, 2774
Sau96I	GGNCC	9 cut(s)	554, 1001, 1091, 1181, 1188, 1211, 1241, 1802, 2831
SchI	GAGTC	3 cut(s)	437, 812, 1577
SduI	GDGCHC	7 cut(s)	794, 1789, 1883, 2038, 2241, 2362, 2519
SfaNI	GCATC	9 cut(s)	328, 551, 892, 926, 956, 1384, 1477, 1672, 2308
SfcI	CTRYAG	2 cut(s)	754, 1305
Sfr274I	CTCGAG	1 cut(s)	2288
SinI	GGWCC	7 cut(s)	554, 1001, 1091, 1181, 1211, 1241, 2831
SlaI	CTCGAG	1 cut(s)	2288
SmiMI	CAYNNNNRTG	1 cut(s)	2538
SmlI	CTYRAG	3 cut(s)	1970, 2210, 2288
SmoI	CTYRAG	3 cut(s)	1970, 2210, 2288
SpeI	ACTAGT	1 cut(s)	112
SseBI	AGGCCT	1 cut(s)	991
SsiI	CCGC	6 cut(s)	1004, 1088, 1109, 2134, 2581, 2773
SspMI	CTAG	6 cut(s)	113, 1284, 1319, 1439, 2187, 2814
StuI	AGGCCT	1 cut(s)	991
StyI	CCWWGG	2 cut(s)	1283, 2533
TaaI	ACNGT	5 cut(s)	276, 706, 1815, 1857, 2341
TaiI	ACGT	2 cut(s)	172, 916
TaqI	TCGA	6 cut(s)	596, 1324, 1367, 1779, 1833, 2289
TatI	WGTACW	1 cut(s)	743
TauI	GCSGC	1 cut(s)	2776
TfiI	GAWTC	5 cut(s)	1514, 1630, 1913, 2496, 2629
TscAI	CASTG	5 cut(s)	285, 475, 711, 2439, 2524
TseFI	GTSAC	4 cut(s)	276, 706, 1660, 1897
TseI	GCWGC	5 cut(s)	722, 1151, 1361, 2153, 2162
Tsp45I	GTSAC	4 cut(s)	276, 706, 1660, 1897
TspDTI	ATGAA	9 cut(s)	270, 948, 1563, 1588, 2024, 2298, 2411, 2414, 2442
TspGWI	ACGGA	2 cut(s)	365, 978
TspRI	CASTG	5 cut(s)	285, 475, 711, 2439, 2524
Van91I	CCANNNNNTGG	7 cut(s)	128, 196, 408, 1145, 1178, 1208, 1268
VneI	GTGCAC	3 cut(s)	1785, 1879, 2034
VpaK11BI	GGWCC	7 cut(s)	554, 1001, 1091, 1181, 1211, 1241, 2831
VspI	ATTAAT	1 cut(s)	1611
XagI	CCTNNNNNAGG	2 cut(s)	516, 561
XapI	RAATTY	4 cut(s)	530, 592, 856, 1715
XhoI	CTCGAG	1 cut(s)	2288
XmaJI	CCTAGG	1 cut(s)	1283
XmiI	GTMKAC	2 cut(s)	109, 2740
XmnI	GAANNNNTTC	4 cut(s)	99, 204, 1719, 1986
XspI	CTAG	6 cut(s)	113, 1284, 1319, 1439, 2187, 2814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.