Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0004133

Physical Location & Seq

Genomic Coordinates Forward (+)

62514256 .. 62520715

Gene Structure 6460 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00043830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2931 bp

ATGATAATACTACAACAAATGGGTCTTATGAGGACAAGTCGTTTCGTAGTTTTGGTTACTCTGTTTTGTGTTTCAGCTTTGATCAGCTCGGAGGAGAGAGTGATCACAGAAGAAGTGTTTCTCAGTAGACTAGTTGATCCAGCAACTGGAAAGATTGATGGAGATATGGCACAGCTGTTATGGGTACGTTGCAAGGTAGATTTGACCCATTTGGTGGAAACTTTTCAAGATCTTCACTTATGGTTACCAGAGGAAACATCTACCAGCACAGATGAAATTAGTTCAAAAAGACAGTCACTGGAAGAAGAAAATGTGCAGAAACTTATTAGTGTCCTGCATCCTCAGGTGAAACAAACTCTTTCAGATTGTTTCAGAAAGAATAATCTCTTTTTCCGTGTCTCTGGAGAAGAGAATGCCTCCAAGATTTGGTATGCCAAGTATATTGAGTCTCTATTTCCCAGACCTGTTCCAAGAAGGAATATGGGCAGTGAATTGCTCCAGACCTCTGCTGAGGTTCCTTCTCCTGCCCCTGCACCAGGATCTTCTAAACTCAGTCCAGCATCATCCCCTGGTCCTGCACCTTCTGCTTCTGGCATTTCTAGGTCCTTGGGCCCTACTACTCCACAAGTATCATTTTTTCCTTCCGTGCCCCGAAATTCGAGTTCACAACCTTCAGTTAGCGAACCAGCTCCCAGCACCATTATACAGATAACTAAGAAAAAGACTGACCATAAACCAATTATCATTGCAGTTGTTGTAACTGCAACAGTGACATTTATTGTTGCAGCAGTCTTCTTTTTATGCTGTACTAAAATCTGTAGGACACGGCGTAAAGATAGACAAAATGATGAGAGCCCCCTTCTTAGCCTGAGTAAATCCGACTCTGGAGGTTCTTCTTACAAGTCTTATCCTTTGGAAAATTCAATAAAAGGAGAGAAGGTTGAGCATCAATCATTGGAATTAGGATCCATTGGACGTGCATCCAAATCCCGGTATGAATTGTATGAGGCATCCAGCAATGGAAACGGATGGATACCACCTCCTCCTGGAAGGCCTCCTAATGGACTGCCTCCTCTGAAGCCCCCTCCTGGCAGAGCAAATCCTCTCCCTCCCGAACCACCTTCTTCTTTTAAGCCTCCTCCTGGCAGGGCGGGTCCTCCTCCAACCCCTCCCCCTCCTGTACCACCTCCCACTTTGAAACCATCTGGTGGTGCAGCCCCTCCCCCACCACCTCCAGCTCCTGGTGCTCACCCCCCACCACCTCCAGCTCCTGGTCCTCGGCCCCCACCACCTCCAGCTCCTGGTCCTCGCCCCCTGCCACCTTCAGCTCCTGGTCCTCCTCCCCCACCACTTCCAAAGATTGGTGTACCTCCTCCTAGGCCACCTCCATCAATGCCTATAGGTTCTAAGCTAGCTCGTCCTCCACCATTTGCACCAAAGCGGCCATCAAATGCTGCTTCGAGTGATGGCTCAGGGGCTGATGGTGATGCTCCTAAAACCAAGCTGAAGCCCTTTTTTTGGGATAAGGTTCTAGCAAACCCTGATCATTCAATGGTGTGGCATCAGATTAAATCAGGATCTTTCCAGTTTGATGAGAACATGATTGAATCTCTGTTTGGGTATAATGCTGGTGATAAAAACAAAAATGATCGCAAGAAAGAGTCTTCATCCCAAGATCCTACACCTCAGTTCATTCAACTTATTAATCCCAAAAAGGCACAGAATCTATCAATTCTTCTCCGGGCTTTGAATGTGACAATAGAAGAAGTCTGCGATGCAATTCGTGAAGGAAATGAGCTTCCCATTGAATTCGTTCAAACTTTGTTGAAGATGGCACCAACACAAGAAGAAGAACTAAAGCTCAGGGTGTTCGATGGTGCACTTTCTCAACTTGGGCCTGCTGAACGGTTCTTAAAAGGCTTAATCGACATCCCTTTTGCCTTTAAACGGTTGGAAGCCTTACTTTTTATGTGCACCCTTCAGGAGGAGGTCACCAACCTTAAAGAATCCTTCGCAACCTTAGAGGTTGCTTGCAAGGAACTCAGAAACAGCCGACTTTTCCTCAAGCTTCTAGAAGCTGTTCTTAAAACTGGCAATCGCATGAATGATGGAACATTTCGTGGTGGTGCACAGGCATTTAAGCTCGACACACTCTTGAAATTGTCAGATGTAAAGGGAACAGATGGCAAGACAACGCTTTTGCACTTCGTTGTTCAGGAAATAATCCGCTCTGAGGGTGTGAGAGCTGCTCGTGCAGCAAAAGAGAACCGGAGTTTCTCTAGCGTCAAAACAGATGATCTCCTTGAGGAAACTTCCCATGACACAGAAGAGGACTATTGTAATCTTGGTCTGGAGAAAGTATCAGGTTTAAGCAATGAACTCGAGAATGTAAAAAAAGCATCAATTTTGGATGCTGATAGCTTAACAGGAACCGTTGGCAAACTTGGAAGTGCTCTGGTAAAAGCCCGAGATTTTCTGAACTCAGACATGAAGAAGTCAGAGGAAGAAAGTGGTTTTCATGAAACACTGAAGAGTTTTGTGCAGAATGCTGATGTTGATATCAGGGGTCTCCGTGAGGAAGAAAAGAGAATCATGGCTCTGGTAAAGAGCACTGGAGACTATTTCCATGGGAATGCAGGGAAGGATGAGGGTTTACATTTGTTTGTTGTTGTGCGGGATTTTTTAATAATTTTAGATAAGGTATGCAAAGAAGTGAGATTGAATCCAAAAAAGTTCACAAAGGTTCAGAAAAAGGAGGCACCTTCCTCTGATCCCCACCAGCCTCCTACAACGCCATCTGCCTCTGATCCCCACCAGCCTCCTTCTCCTGGTCTACGCCAGCCTCCCTTTCCAGATCTCCATCAGCGGCTTTTCCCGGCAATCAAAGATCGGCGCATGGACAATTCTAGCTCAGATGATGAAGATCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007010 GO:0007015 GO:0007275 GO:0008064 GO:0008092 GO:0008150 GO:0008154 GO:0009524 GO:0009653 GO:0009791 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0010638 GO:0016043 GO:0022414 GO:0022607 GO:0030029 GO:0030036 GO:0030041 GO:0030312 GO:0030832 GO:0030833 GO:0030838 GO:0031334 GO:0032271 GO:0032273 GO:0032501 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0034622 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0045010 GO:0048316 GO:0048317 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051258 GO:0051493 GO:0051495 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0090698 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04320 map04320

Pfam Domains

Protein Families

FH2

Protein Analysis

976

Amino Acids

106.56

Weight (kDa)

8.59

Isoelectric Point (pI)

56.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	497 - 897	3.6e-110	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54650 AT5G54650
fragaria_vesca	FvH4_3g21670 FvH4_3g21670 FvH4_3g21670 FvH4_3g21670 FvH4_3g21670 FvH4_3g21670
malus_domestica	MD03G1213400.v1.1 MD11G1228300.v1.1
prunus_persica	Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1 Prupe.4G201000_v2.0.a1
pyrus_communis	pycom03g16200 pycom11g20090
rosa_chinensis	RchiOBHm_Chr5g0037151
rosa_laevigata	RLG00000033762
rosa_multiflora	Rmu_ssc0000448.1_g000003
rosa_roxburghii	Rroxscaffold_1G00043830
rosa_rugosa	Rorug05G0161100 Rorug05G0161100 Rorug05G0161200
rosa_samantha	Rh5AG252800 Rh5BG254700 Rh5CG287200 Rh5DG263200 Rh6CG204900
rosa_wichuraiana	Rw5G023330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1834, 2758
AccB7I	CCANNNNNTGG	8 cut(s)	146, 214, 426, 1208, 1241, 1271, 1301, 1361
AccBSI	CCGCTC	1 cut(s)	2229
AccI	GTMKAC	2 cut(s)	127, 2833
AciI	CCGC	5 cut(s)	1151, 1441, 2227, 2674, 2866
AclWI	GGATC	9 cut(s)	131, 547, 960, 973, 1585, 1670, 2765, 2801, 2918
AcoI	YGGCCR	1 cut(s)	1442
AcsI	RAATTY	3 cut(s)	655, 919, 1808
AcuI	CTGAAG	6 cut(s)	657, 1097, 1308, 1526, 1964, 2549
AfaI	GTAC	4 cut(s)	186, 808, 1182, 1368
AhlI	ACTAGT	1 cut(s)	130
AjiI	CACGTC	1 cut(s)	977
AjuI	GAANNNNNNNTTGG	2 cut(s)	1599, 1631
Alw21I	GWGCWC	6 cut(s)	1249, 1882, 1976, 2131, 2455, 2612
Alw26I	GTCTC	4 cut(s)	403, 453, 2573, 2610
Alw44I	GTGCAC	3 cut(s)	1878, 1972, 2127
AlwI	GGATC	9 cut(s)	131, 547, 960, 973, 1585, 1670, 2765, 2801, 2918
AlwNI	CAGNNNCTG	7 cut(s)	146, 298, 1241, 1271, 1301, 1331, 1478
Ama87I	CYCGRG	2 cut(s)	2381, 2466
AoxI	GGCC	6 cut(s)	610, 1052, 1280, 1379, 1442, 1895
ApaI	GGGCCC	1 cut(s)	614
ApaLI	GTGCAC	3 cut(s)	1878, 1972, 2127
ApeKI	GCWGC	5 cut(s)	785, 1214, 1454, 2246, 2255
ApoI	RAATTY	3 cut(s)	655, 919, 1808
ArsI	GACNNNNNNTTYG	6 cut(s)	278, 310, 1919, 1951, 2182, 2214
AseI	ATTAAT	1 cut(s)	1704
Asp700I	GAANNNNTTC	4 cut(s)	117, 222, 1812, 2079
AspA2I	CCTAGG	1 cut(s)	1376
AspLEI	GCGC	1 cut(s)	2895
AsuC2I	CCSGG	3 cut(s)	991, 1742, 2876
AsuHPI	GGTGA	5 cut(s)	358, 1241, 1496, 1643, 1984
AsuNHI	GCTAGC	1 cut(s)	1411
AvaI	CYCGRG	2 cut(s)	2381, 2466
AvaII	GGWCC	6 cut(s)	572, 603, 1154, 1274, 1304, 1334
AvrII	CCTAGG	1 cut(s)	1376
AxyI	CCTNAGG	1 cut(s)	342
BaeGI	GKGCMC	5 cut(s)	614, 651, 1882, 1976, 2131
BamHI	GGATCC	1 cut(s)	965
BanI	GGYRCC	2 cut(s)	1834, 2758
BanII	GRGCYC	2 cut(s)	614, 857
BauI	CACGAG	1 cut(s)	2250
BbsI	GAAGAC	2 cut(s)	784, 1656
Bbv12I	GWGCWC	6 cut(s)	1249, 1882, 1976, 2131, 2455, 2612
BbvCI	CCTCAGC	1 cut(s)	510
BbvI	GCAGC	5 cut(s)	797, 1226, 1441, 2233, 2267
BceAI	ACGGC	1 cut(s)	842
BcgI	CGANNNNNNTGC	2 cut(s)	2362, 2396
BciVI	GTATCC	1 cut(s)	1026
BclI	TGATCA	3 cut(s)	81, 102, 1543
BcnI	CCSGG	3 cut(s)	991, 1742, 2876
BcoDI	GTCTC	4 cut(s)	403, 453, 2573, 2610
BcuI	ACTAGT	1 cut(s)	130
BfaI	CTAG	8 cut(s)	131, 600, 1377, 1412, 1532, 2072, 2280, 2907
BfmI	CTRYAG	2 cut(s)	817, 1398
BfuI	GTATCC	1 cut(s)	1026
BglII	AGATCT	2 cut(s)	229, 2854
BisI	GCNGC	7 cut(s)	786, 1215, 1442, 1455, 2247, 2256, 2867
BlnI	CCTAGG	1 cut(s)	1376
BlsI	GCNGC	7 cut(s)	787, 1216, 1443, 1456, 2248, 2257, 2868
Bme18I	GGWCC	6 cut(s)	572, 603, 1154, 1274, 1304, 1334
BmeT110I	CYCGRG	2 cut(s)	2381, 2466
BmgBI	CACGTC	1 cut(s)	977
BmiI	GGNNCC	8 cut(s)	516, 612, 967, 1155, 1283, 1836, 2431, 2760
BmtI	GCTAGC	1 cut(s)	1415
BpiI	GAAGAC	2 cut(s)	784, 1656
BplI	GAGNNNNNCTC	4 cut(s)	401, 433, 2233, 2265
BpmI	CTGGAG	8 cut(s)	423, 482, 906, 1218, 1248, 1278, 2372, 2634
Bpu10I	CCTNAGC	3 cut(s)	510, 1471, 1862
BpuEI	CTTGAG	2 cut(s)	2048, 2324
BpuMI	CCSGG	3 cut(s)	991, 1742, 2876
BsaBI	GATNNNNATC	2 cut(s)	2859, 2922
BsaI	GGTCTC	1 cut(s)	2573
BsaJI	CCNNGG	5 cut(s)	568, 606, 1277, 1376, 2626
BsaWI	WCCGGW	1 cut(s)	2268
BsaXI	ACNNNNNCTCC	2 cut(s)	924, 954
Bse1I	ACTGG	5 cut(s)	151, 303, 1585, 2095, 2617
Bse21I	CCTNAGG	1 cut(s)	342
Bse3DI	GCAATG	3 cut(s)	744, 1024, 2380
Bse8I	GATNNNNATC	2 cut(s)	2859, 2922
BseDI	CCNNGG	5 cut(s)	568, 606, 1277, 1376, 2626
BseGI	GGATG	9 cut(s)	337, 563, 980, 1010, 1034, 1667, 1929, 2416, 2650
BseJI	GATNNNNATC	2 cut(s)	2859, 2922
BseMI	GCAATG	3 cut(s)	744, 1024, 2380
BseNI	ACTGG	5 cut(s)	151, 303, 1585, 2095, 2617
BseRI	GAGGAG	8 cut(s)	107, 1032, 1062, 1128, 1149, 1329, 1362, 2000
BseSI	GKGCMC	5 cut(s)	614, 651, 1882, 1976, 2131
BseXI	GCAGC	5 cut(s)	797, 1226, 1441, 2233, 2267
BseYI	CCCAGC	1 cut(s)	692
BsgI	GTGCAG	6 cut(s)	335, 516, 561, 1233, 2274, 2561
BshFI	GGCC	6 cut(s)	612, 1054, 1282, 1381, 1444, 1897
BshNI	GGYRCC	2 cut(s)	1834, 2758
BsiHKAI	GWGCWC	6 cut(s)	1249, 1882, 1976, 2131, 2455, 2612
BsiHKCI	CYCGRG	2 cut(s)	2381, 2466
BsiSI	CCGG	4 cut(s)	991, 1741, 2269, 2876
BsmAI	GTCTC	4 cut(s)	403, 453, 2573, 2610
BsmI	GAATGC	3 cut(s)	418, 2551, 2638
BsnI	GGCC	6 cut(s)	612, 1054, 1282, 1381, 1444, 1897
Bso31I	GGTCTC	1 cut(s)	2573
BsoBI	CYCGRG	2 cut(s)	2381, 2466
Bsp120I	GGGCCC	1 cut(s)	610
Bsp1286I	GDGCHC	9 cut(s)	614, 651, 857, 1249, 1882, 1976, 2131, 2455, 2612
Bsp19I	CCATGG	1 cut(s)	2626
BspACI	CCGC	5 cut(s)	1151, 1441, 2227, 2674, 2866
BspANI	GGCC	6 cut(s)	612, 1054, 1282, 1381, 1444, 1897
BspHI	TCATGA	1 cut(s)	2518
BspLI	GGNNCC	8 cut(s)	516, 612, 967, 1155, 1283, 1836, 2431, 2760
BspOI	GCTAGC	1 cut(s)	1415
BspPI	GGATC	9 cut(s)	131, 547, 960, 973, 1585, 1670, 2765, 2801, 2918
BspT107I	GGYRCC	2 cut(s)	1834, 2758
BspTNI	GGTCTC	1 cut(s)	2573
BsrBI	CCGCTC	1 cut(s)	2229
BsrDI	GCAATG	3 cut(s)	744, 1024, 2380
BsrI	ACTGG	5 cut(s)	151, 303, 1585, 2095, 2617
BssECI	CCNNGG	5 cut(s)	568, 606, 1277, 1376, 2626
BssSI	CACGAG	1 cut(s)	2250
BssT1I	CCWWGG	3 cut(s)	606, 1376, 2626
Bst2BI	CACGAG	1 cut(s)	2250
Bst4CI	ACNGT	5 cut(s)	294, 769, 1908, 1950, 2434
Bst6I	CTCTTC	3 cut(s)	402, 2322, 2525
BstAPI	GCANNNNNTGC	1 cut(s)	584
BstC8I	GCNNGC	4 cut(s)	1413, 1899, 2032, 2840
BstDSI	CCRYGG	1 cut(s)	2626
BstEII	GGTNACC	2 cut(s)	243, 1990
BstENI	CCTNNNNNAGG	2 cut(s)	534, 1982
BstF5I	GGATG	9 cut(s)	337, 563, 980, 1010, 1034, 1667, 1929, 2416, 2650
BstHHI	GCGC	1 cut(s)	2895
BstMAI	GTCTC	4 cut(s)	403, 453, 2573, 2610
BstMWI	GCNNNNNNNGC	4 cut(s)	584, 1244, 2252, 2255
BstPI	GGTNACC	2 cut(s)	243, 1990
BstSFI	CTRYAG	2 cut(s)	817, 1398
BstSLI	GKGCMC	5 cut(s)	614, 651, 1882, 1976, 2131
BstV1I	GCAGC	5 cut(s)	797, 1226, 1441, 2233, 2267
BstV2I	GAAGAC	2 cut(s)	784, 1656
BstX2I	RGATCY	7 cut(s)	229, 539, 965, 1577, 1675, 2854, 2923
BstYI	RGATCY	7 cut(s)	229, 539, 965, 1577, 1675, 2854, 2923
Bsu36I	CCTNAGG	1 cut(s)	342
BsuI	GTATCC	1 cut(s)	1026
BsuRI	GGCC	6 cut(s)	612, 1054, 1282, 1381, 1444, 1897
BtgI	CCRYGG	1 cut(s)	2626
BtgZI	GCGATG	1 cut(s)	1788
BtrI	CACGTC	1 cut(s)	977
BtsCI	GGATG	9 cut(s)	337, 563, 980, 1010, 1034, 1667, 1929, 2416, 2650
BtsI	GCAGTG	1 cut(s)	493
BtsIMutI	CAGTG	5 cut(s)	296, 493, 774, 2525, 2610
Cac8I	GCNNGC	4 cut(s)	1413, 1899, 2032, 2840
CaiI	CAGNNNCTG	7 cut(s)	146, 298, 1241, 1271, 1301, 1331, 1478
CciI	TCATGA	1 cut(s)	2518
CfoI	GCGC	1 cut(s)	2895
CseI	GACGC	1 cut(s)	2272
Csp6I	GTAC	4 cut(s)	185, 807, 1181, 1367
CviAII	CATG	8 cut(s)	1600, 2101, 2318, 2488, 2519, 2593, 2627, 2896
CviQI	GTAC	4 cut(s)	185, 807, 1181, 1367
DraI	TTTAAA	1 cut(s)	1945
EaeI	YGGCCR	1 cut(s)	1442
Eam1104I	CTCTTC	3 cut(s)	402, 2322, 2525
EarI	CTCTTC	3 cut(s)	402, 2322, 2525
Eco130I	CCWWGG	3 cut(s)	606, 1376, 2626
Eco147I	AGGCCT	1 cut(s)	1054
Eco24I	GRGCYC	2 cut(s)	614, 857
Eco31I	GGTCTC	1 cut(s)	2573
Eco32I	GATATC	1 cut(s)	2560
Eco47I	GGWCC	6 cut(s)	572, 603, 1154, 1274, 1304, 1334
Eco57I	CTGAAG	6 cut(s)	657, 1097, 1308, 1526, 1964, 2549
Eco81I	CCTNAGG	1 cut(s)	342
Eco88I	CYCGRG	2 cut(s)	2381, 2466
Eco91I	GGTNACC	2 cut(s)	243, 1990
EcoNI	CCTNNNNNAGG	2 cut(s)	534, 1982
EcoO109I	RGGNCCY	3 cut(s)	603, 611, 1154
EcoO65I	GGTNACC	2 cut(s)	243, 1990
EcoRI	GAATTC	1 cut(s)	1808
EcoRV	GATATC	1 cut(s)	2560
EcoT14I	CCWWGG	3 cut(s)	606, 1376, 2626
EcoT38I	GRGCYC	2 cut(s)	614, 857
ErhI	CCWWGG	3 cut(s)	606, 1376, 2626
FaeI	CATG	8 cut(s)	1603, 2104, 2321, 2491, 2522, 2596, 2630, 2899
FalI	AAGNNNNNCTT	4 cut(s)	1947, 1979, 2067, 2099
FatI	CATG	8 cut(s)	1599, 2100, 2317, 2487, 2518, 2592, 2626, 2895
FauI	CCCGC	2 cut(s)	1144, 2667
FbaI	TGATCA	3 cut(s)	81, 102, 1543
FblI	GTMKAC	2 cut(s)	127, 2833
Fnu4HI	GCNGC	7 cut(s)	786, 1215, 1442, 1455, 2247, 2256, 2867
FokI	GGATG	9 cut(s)	324, 550, 967, 997, 1041, 1654, 1916, 2423, 2657
FriOI	GRGCYC	2 cut(s)	614, 857
Fsp4HI	GCNGC	7 cut(s)	786, 1215, 1442, 1455, 2247, 2256, 2867
FspBI	CTAG	8 cut(s)	131, 600, 1377, 1412, 1532, 2072, 2280, 2907
GlaI	GCGC	1 cut(s)	2894
GluI	GCNGC	7 cut(s)	786, 1215, 1442, 1455, 2247, 2256, 2867
GsaI	CCCAGC	1 cut(s)	696
GsuI	CTGGAG	8 cut(s)	423, 482, 906, 1218, 1248, 1278, 2372, 2634
HaeIII	GGCC	6 cut(s)	612, 1054, 1282, 1381, 1444, 1897
HapII	CCGG	4 cut(s)	991, 1741, 2269, 2876
HgaI	GACGC	1 cut(s)	2272
HhaI	GCGC	1 cut(s)	2895
Hin1II	CATG	8 cut(s)	1603, 2104, 2321, 2491, 2522, 2596, 2630, 2899
Hin6I	GCGC	1 cut(s)	2893
HinP1I	GCGC	1 cut(s)	2893
HindIII	AAGCTT	1 cut(s)	2066
HinfI	GANTC	8 cut(s)	446, 881, 1607, 1661, 1723, 2006, 2589, 2722
HpaII	CCGG	4 cut(s)	991, 1741, 2269, 2876
HphI	GGTGA	5 cut(s)	358, 1241, 1496, 1643, 1984
Hpy166II	GTNNAC	9 cut(s)	128, 665, 1367, 1880, 1974, 2129, 2654, 2736, 2834
Hpy8I	GTNNAC	9 cut(s)	128, 665, 1367, 1880, 1974, 2129, 2654, 2736, 2834
HpyCH4III	ACNGT	5 cut(s)	294, 769, 1908, 1950, 2434
HpyCH4IV	ACGT	2 cut(s)	187, 976
HpyF10VI	GCNNNNNNNGC	4 cut(s)	584, 1244, 2252, 2255
HpySE526I	ACGT	2 cut(s)	187, 976
Hsp92II	CATG	8 cut(s)	1603, 2104, 2321, 2491, 2522, 2596, 2630, 2899
HspAI	GCGC	1 cut(s)	2893
Ksp22I	TGATCA	3 cut(s)	81, 102, 1543
LmnI	GCTCC	7 cut(s)	501, 694, 1243, 1273, 1303, 1333, 1495
Lsp1109I	GCAGC	5 cut(s)	797, 1226, 1441, 2233, 2267
MaeI	CTAG	8 cut(s)	131, 600, 1377, 1412, 1532, 2072, 2280, 2907
MaeII	ACGT	2 cut(s)	187, 976
MaeIII	GTNAC	7 cut(s)	55, 243, 294, 757, 769, 1753, 1990
MbiI	CCGCTC	1 cut(s)	2229
MflI	RGATCY	7 cut(s)	229, 539, 965, 1577, 1675, 2854, 2923
MhlI	GDGCHC	9 cut(s)	614, 651, 857, 1249, 1882, 1976, 2131, 2455, 2612
MlyI	GAGTC	3 cut(s)	455, 875, 1670
MmeI	TCCRAC	3 cut(s)	903, 1187, 1932
MroXI	GAANNNNTTC	4 cut(s)	117, 222, 1812, 2079
MslI	CAYNNNNRTG	1 cut(s)	2631
MspA1I	CMGCKG	2 cut(s)	175, 2866
MspI	CCGG	4 cut(s)	991, 1741, 2269, 2876
Mva1269I	GAATGC	3 cut(s)	418, 2551, 2638
MwoI	GCNNNNNNNGC	4 cut(s)	584, 1244, 2252, 2255
NciI	CCSGG	3 cut(s)	991, 1742, 2876
NcoI	CCATGG	1 cut(s)	2626
NheI	GCTAGC	1 cut(s)	1411
NlaIII	CATG	8 cut(s)	1603, 2104, 2321, 2491, 2522, 2596, 2630, 2899
NlaIV	GGNNCC	8 cut(s)	516, 612, 967, 1155, 1283, 1836, 2431, 2760
NmeAIII	GCCGAG	1 cut(s)	1258
NmuCI	GTSAC	4 cut(s)	294, 769, 1753, 1990
PaeR7I	CTCGAG	1 cut(s)	2381
PagI	TCATGA	1 cut(s)	2518
PceI	AGGCCT	1 cut(s)	1054
PctI	GAATGC	3 cut(s)	418, 2551, 2638
PdmI	GAANNNNTTC	4 cut(s)	117, 222, 1812, 2079
PfeI	GAWTC	5 cut(s)	1607, 1723, 2006, 2589, 2722
PflMI	CCANNNNNTGG	8 cut(s)	146, 214, 426, 1208, 1241, 1271, 1301, 1361
PfoI	TCCNGGA	1 cut(s)	1045
PkrI	GCNGC	7 cut(s)	787, 1216, 1443, 1456, 2248, 2257, 2868
PleI	GAGTC	3 cut(s)	454, 875, 1669
PpsI	GAGTC	3 cut(s)	454, 875, 1669
PpuMI	RGGWCCY	2 cut(s)	603, 1154
PshBI	ATTAAT	1 cut(s)	1704
Psp5II	RGGWCCY	2 cut(s)	603, 1154
PspEI	GGTNACC	2 cut(s)	243, 1990
PspFI	CCCAGC	1 cut(s)	692
PspN4I	GGNNCC	8 cut(s)	516, 612, 967, 1155, 1283, 1836, 2431, 2760
PspOMI	GGGCCC	1 cut(s)	610
PspPPI	RGGWCCY	2 cut(s)	603, 1154
PstNI	CAGNNNCTG	7 cut(s)	146, 298, 1241, 1271, 1301, 1331, 1478
PsuI	RGATCY	7 cut(s)	229, 539, 965, 1577, 1675, 2854, 2923
PvuII	CAGCTG	1 cut(s)	175
RsaI	GTAC	4 cut(s)	186, 808, 1182, 1368
RsaNI	GTAC	4 cut(s)	185, 807, 1181, 1367
RseI	CAYNNNNRTG	1 cut(s)	2631
SatI	GCNGC	7 cut(s)	786, 1215, 1442, 1455, 2247, 2256, 2867
SchI	GAGTC	3 cut(s)	455, 875, 1670
SduI	GDGCHC	9 cut(s)	614, 651, 857, 1249, 1882, 1976, 2131, 2455, 2612
SfcI	CTRYAG	2 cut(s)	817, 1398
Sfr274I	CTCGAG	1 cut(s)	2381
SinI	GGWCC	6 cut(s)	572, 603, 1154, 1274, 1304, 1334
SlaI	CTCGAG	1 cut(s)	2381
SmiMI	CAYNNNNRTG	1 cut(s)	2631
SmlI	CTYRAG	3 cut(s)	2063, 2303, 2381
SmoI	CTYRAG	3 cut(s)	2063, 2303, 2381
SpeI	ACTAGT	1 cut(s)	130
SseBI	AGGCCT	1 cut(s)	1054
SsiI	CCGC	5 cut(s)	1151, 1441, 2227, 2674, 2866
SspMI	CTAG	8 cut(s)	131, 600, 1377, 1412, 1532, 2072, 2280, 2907
StuI	AGGCCT	1 cut(s)	1054
StyI	CCWWGG	3 cut(s)	606, 1376, 2626
TaaI	ACNGT	5 cut(s)	294, 769, 1908, 1950, 2434
TaiI	ACGT	2 cut(s)	190, 979
TaqI	TCGA	6 cut(s)	659, 1460, 1872, 1926, 2145, 2382
TatI	WGTACW	1 cut(s)	806
TauI	GCSGC	2 cut(s)	1444, 2869
TfiI	GAWTC	5 cut(s)	1607, 1723, 2006, 2589, 2722
TscAI	CASTG	5 cut(s)	303, 493, 774, 2532, 2617
TseFI	GTSAC	4 cut(s)	294, 769, 1753, 1990
TseI	GCWGC	5 cut(s)	785, 1214, 1454, 2246, 2255
Tsp45I	GTSAC	4 cut(s)	294, 769, 1753, 1990
TspDTI	ATGAA	9 cut(s)	288, 1011, 1656, 1681, 2117, 2391, 2504, 2507, 2535
TspGWI	ACGGA	4 cut(s)	383, 634, 1041, 2561
TspRI	CASTG	5 cut(s)	303, 493, 774, 2532, 2617
Van91I	CCANNNNNTGG	8 cut(s)	146, 214, 426, 1208, 1241, 1271, 1301, 1361
VneI	GTGCAC	3 cut(s)	1878, 1972, 2127
VpaK11BI	GGWCC	6 cut(s)	572, 603, 1154, 1274, 1304, 1334
VspI	ATTAAT	1 cut(s)	1704
XagI	CCTNNNNNAGG	2 cut(s)	534, 1982
XapI	RAATTY	3 cut(s)	655, 919, 1808
XbaI	TCTAGA	1 cut(s)	2071
XhoI	CTCGAG	1 cut(s)	2381
XmaJI	CCTAGG	1 cut(s)	1376
XmiI	GTMKAC	2 cut(s)	127, 2833
XmnI	GAANNNNTTC	4 cut(s)	117, 222, 1812, 2079
XspI	CTAG	8 cut(s)	131, 600, 1377, 1412, 1532, 2072, 2280, 2907

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.