MD03G1244700.v1.1

Gamma-glutamyl

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Reverse (-)
33139535 .. 33144665
5131 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1244700.v1.1.491

Sequence Viewer

Length: 1044 bp
ATGTGGAGCTACCTCTGGATTCCTTTCCTAATCTCCTTGTCCAAAGAGCTGCCCTTGGCCAAAGCCCAGGCGCCGATTCTCTTGCCGAGTCAACTCCGAACATCGGACTCGTCCTCGTCCAAGTGTACGGCCCCCGACCCCAAGATCAACTACAGGCCGGTGATCGGTATCCTGAGCCACCCTGGCGACGGCGCTTCCGGCCGGCTGAGCAACGCCTCCACGGCGTCGTATATCGCAGCTTCTTACGTCAAGTTCGTTGAATCGGCTGGAGCTCGTGTTATTCCTCTCATCTACAACGAGCCTCCCGATATACTTTTCCAGAAGCTCGACCTCGTCAATGGCGTGCTTTTCACTGGAGGATGGGCTAAAAGTGGTTTGTACTATGACGTTGCCGAGAGAATATTTAAGAAAATTATAGAGAAGAATGACGCTGGAGATCATTTTCCATTATACGCCACCTGCTTAGGTTTTGAACTTCTAACAATGATCATCAGCAAGAACAAGAAAATTCTGGAGACATTCAGTGCAGTAGATGTGGCCTCAACTTTACAATTTACCGAGAACGCCGTTATTGAAGGAACTGTTTTTCAAAGATTTCCTCCGGACTTGCTTAAGAAGTTGAGTACAGATTGTCTTGTAATGCAAAACCATAAATATGGTATCTCACCAGAGAGGCTTATGGAGAACGAGAACCTGTCAAGTTTCTTTAAGATCTTGACAACTTGTACTGATGAAGATGATAAGGTCTATGTGTCCACAGTACACGCATACAACTATCCTGTGACTGCCTTCCAATGGCATCCAGAGAAAAATGCTTTCGAATGGGGCTTACCAATGATTCCGCACTCAGAGGATGCTATTCAAGTGACCCAGCACGCTGCAAACTTCTTGGTCAGTGAGGCAAGGAAGTCATTAAACAGACCGCCTGTCCGGGAAGTCCTTGACAATCTCATCTACAACTACAGTCCCACTTTTTGTGGGAAGGCTGGGAGGGGATTCGACGAAGTTTACATCTTTACGCAACCTTCACTCGCTCATTTGTAA

Protein Analysis

348

Amino Acids

38.8

Weight (kDa)

6.08

Isoelectric Point (pI)

35.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C26 PF07722 53 - 269 5.9e-11 Peptidase C26
GATase PF00117 86 - 273 3.3e-08 Glutamine amidotransferase class-I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 467
Acc36I ACCTGC 1 cut(s) 467
AccB1I GGYRCC 1 cut(s) 70
AccIII TCCGGA 1 cut(s) 601
AciI CCGC 2 cut(s) 842, 923
AcoI YGGCCR 2 cut(s) 57, 199
AcsI RAATTY 1 cut(s) 507
AcyI GRCGYC 2 cut(s) 71, 224
AfaI GTAC 5 cut(s) 127, 380, 625, 727, 762
AfiI CCNNNNNNNGG 4 cut(s) 103, 164, 188, 795
AflII CTTAAG 1 cut(s) 611
AgsI TTSAA 5 cut(s) 260, 473, 575, 590, 863
AhdI GACNNNNNGTC 1 cut(s) 926
AjnI CCWGG 2 cut(s) 66, 181
AluBI AGCT 5 cut(s) 9, 49, 239, 272, 325
AluI AGCT 5 cut(s) 9, 49, 239, 272, 325
Alw21I GWGCWC 1 cut(s) 274
Alw26I GTCTC 1 cut(s) 509
Aor13HI TCCGGA 1 cut(s) 601
AoxI GGCC 5 cut(s) 57, 129, 155, 199, 537
ApeKI GCWGC 3 cut(s) 49, 236, 878
ApoI RAATTY 1 cut(s) 507
AspLEI GCGC 2 cut(s) 73, 194
AspS9I GGNCC 1 cut(s) 130
AsuC2I CCSGG 1 cut(s) 932
AsuHPI GGTGA 2 cut(s) 172, 657
AsuII TTCGAA 1 cut(s) 819
BalI TGGCCA 1 cut(s) 59
BanI GGYRCC 1 cut(s) 70
BanII GRGCYC 1 cut(s) 274
BauI CACGAG 1 cut(s) 273
Bbv12I GWGCWC 1 cut(s) 274
BbvI GCAGC 3 cut(s) 36, 248, 865
BccI CCATC 1 cut(s) 354
BceAI ACGGC 4 cut(s) 144, 205, 237, 551
BcgI CGANNNNNNTGC 2 cut(s) 64, 98
BciT130I CCWGG 2 cut(s) 68, 183
BciVI GTATCC 1 cut(s) 179
BclI TGATCA 1 cut(s) 486
BcnI CCSGG 1 cut(s) 932
BcoDI GTCTC 1 cut(s) 509
BfmI CTRYAG 2 cut(s) 151, 961
BfoI RGCGCY 2 cut(s) 74, 195
BfrI CTTAAG 1 cut(s) 611
BfuAI ACCTGC 1 cut(s) 467
BfuI GTATCC 1 cut(s) 179
BglI GCCNNNNNGGC 2 cut(s) 183, 221
BglII AGATCT 1 cut(s) 711
BisI GCNGC 3 cut(s) 50, 237, 879
BlpI GCTNAGC 1 cut(s) 206
BlsI GCNGC 3 cut(s) 51, 238, 880
Bme1390I CCNGG 3 cut(s) 68, 183, 932
BmeRI GACNNNNNGTC 1 cut(s) 926
BmgT120I GGNCC 1 cut(s) 130
BmiI GGNNCC 2 cut(s) 72, 132
BmrFI CCNGG 3 cut(s) 68, 183, 932
BmsI GCATC 2 cut(s) 808, 844
BpmI CTGGAG 4 cut(s) 288, 375, 453, 533
Bpu10I CCTNAGC 2 cut(s) 173, 463
Bpu1102I GCTNAGC 1 cut(s) 206
Bpu14I TTCGAA 1 cut(s) 819
BpuMI CCSGG 1 cut(s) 932
BsaBI GATNNNNATC 1 cut(s) 167
BsaHI GRCGYC 2 cut(s) 71, 224
BsaJI CCNNGG 4 cut(s) 54, 66, 181, 219
BsaWI WCCGGW 1 cut(s) 601
BsaXI ACNNNNNCTCC 2 cut(s) 261, 291
Bsc4I CCNNNNNNNGG 4 cut(s) 103, 164, 188, 795
Bse118I RCCGGY 2 cut(s) 157, 201
Bse1I ACTGG 1 cut(s) 358
Bse8I GATNNNNATC 1 cut(s) 167
BseAI TCCGGA 1 cut(s) 601
BseBI CCWGG 2 cut(s) 68, 183
BseDI CCNNGG 4 cut(s) 54, 66, 181, 219
BseGI GGATG 3 cut(s) 365, 799, 859
BseJI GATNNNNATC 1 cut(s) 167
BseLI CCNNNNNNNGG 4 cut(s) 103, 164, 188, 795
BseMII CTCAG 3 cut(s) 164, 197, 861
BseNI ACTGG 1 cut(s) 358
BseX3I CGGCCG 1 cut(s) 199
BseXI GCAGC 3 cut(s) 36, 248, 865
BseYI CCCAGC 2 cut(s) 870, 986
BsgI GTGCAG 1 cut(s) 546
Bsh1285I CGRYCG 1 cut(s) 202
BshFI GGCC 5 cut(s) 59, 131, 157, 201, 539
BshNI GGYRCC 1 cut(s) 70
BsiEI CGRYCG 1 cut(s) 202
BsiHKAI GWGCWC 1 cut(s) 274
BsiSI CCGG 5 cut(s) 158, 198, 202, 602, 931
BslFI GGGAC 1 cut(s) 951
BslI CCNNNNNNNGG 4 cut(s) 103, 164, 188, 795
BsmAI GTCTC 1 cut(s) 509
BsmFI GGGAC 1 cut(s) 951
BsnI GGCC 5 cut(s) 59, 131, 157, 201, 539
Bsp119I TTCGAA 1 cut(s) 819
Bsp1286I GDGCHC 1 cut(s) 274
Bsp13I TCCGGA 1 cut(s) 601
Bsp143I GATC 5 cut(s) 144, 162, 436, 486, 711
Bsp1720I GCTNAGC 1 cut(s) 206
BspACI CCGC 2 cut(s) 842, 923
BspANI GGCC 5 cut(s) 59, 131, 157, 201, 539
BspCNI CTCAG 3 cut(s) 165, 198, 860
BspEI TCCGGA 1 cut(s) 601
BspLI GGNNCC 2 cut(s) 72, 132
BspMI ACCTGC 1 cut(s) 467
BspT104I TTCGAA 1 cut(s) 819
BspT107I GGYRCC 1 cut(s) 70
BspTI CTTAAG 1 cut(s) 611
BsrFI RCCGGY 2 cut(s) 157, 201
BsrI ACTGG 1 cut(s) 358
BssAI RCCGGY 2 cut(s) 157, 201
BssECI CCNNGG 4 cut(s) 54, 66, 181, 219
BssMI GATC 5 cut(s) 144, 162, 436, 486, 711
BssNI GRCGYC 2 cut(s) 71, 224
BssSI CACGAG 1 cut(s) 273
BssT1I CCWWGG 1 cut(s) 54
Bst2BI CACGAG 1 cut(s) 273
Bst2UI CCWGG 2 cut(s) 68, 183
Bst4CI ACNGT 3 cut(s) 583, 760, 965
BstACI GRCGYC 2 cut(s) 71, 224
BstAFI CTTAAG 1 cut(s) 611
BstBI TTCGAA 1 cut(s) 819
BstC8I GCNNGC 3 cut(s) 203, 344, 876
BstDEI CTNAG 4 cut(s) 173, 206, 463, 847
BstDSI CCRYGG 1 cut(s) 219
BstF5I GGATG 3 cut(s) 365, 799, 859
BstH2I RGCGCY 2 cut(s) 74, 195
BstHHI GCGC 2 cut(s) 73, 194
BstKTI GATC 5 cut(s) 147, 165, 439, 489, 714
BstMAI GTCTC 1 cut(s) 509
BstMBI GATC 5 cut(s) 144, 162, 436, 486, 711
BstMCI CGRYCG 1 cut(s) 202
BstMWI GCNNNNNNNGC 4 cut(s) 183, 198, 207, 221
BstNI CCWGG 2 cut(s) 68, 183
BstSCI CCNGG 3 cut(s) 66, 181, 930
BstSFI CTRYAG 2 cut(s) 151, 961
BstV1I GCAGC 3 cut(s) 36, 248, 865
BstX2I RGATCY 1 cut(s) 711
BstXI CCANNNNNNTGG 1 cut(s) 656
BstYI RGATCY 1 cut(s) 711
BstZI CGGCCG 1 cut(s) 199
BsuI GTATCC 1 cut(s) 179
BsuRI GGCC 5 cut(s) 59, 131, 157, 201, 539
BtgI CCRYGG 1 cut(s) 219
BtsCI GGATG 3 cut(s) 365, 799, 859
BtsIMutI CAGTG 3 cut(s) 351, 529, 901
BveI ACCTGC 1 cut(s) 467
Cac8I GCNNGC 3 cut(s) 203, 344, 876
CfoI GCGC 2 cut(s) 73, 194
Cfr10I RCCGGY 2 cut(s) 157, 201
Cfr13I GGNCC 1 cut(s) 130
CseI GACGC 2 cut(s) 213, 437
Csp6I GTAC 5 cut(s) 126, 379, 624, 726, 761
CviQI GTAC 5 cut(s) 126, 379, 624, 726, 761
DdeI CTNAG 4 cut(s) 173, 206, 463, 847
DinI GGCGCC 1 cut(s) 72
DpnI GATC 5 cut(s) 146, 164, 438, 488, 713
DpnII GATC 5 cut(s) 144, 162, 436, 486, 711
DriI GACNNNNNGTC 1 cut(s) 926
EaeI YGGCCR 2 cut(s) 57, 199
EagI CGGCCG 1 cut(s) 199
Eam1105I GACNNNNNGTC 1 cut(s) 926
Ecl136II GAGCTC 1 cut(s) 272
EclXI CGGCCG 1 cut(s) 199
Eco130I CCWWGG 1 cut(s) 54
Eco24I GRGCYC 1 cut(s) 274
Eco52I CGGCCG 1 cut(s) 199
Eco53kI GAGCTC 1 cut(s) 272
EcoICRI GAGCTC 1 cut(s) 272
EcoRII CCWGG 2 cut(s) 66, 181
EcoT14I CCWWGG 1 cut(s) 54
EcoT38I GRGCYC 1 cut(s) 274
EgeI GGCGCC 1 cut(s) 72
EheI GGCGCC 1 cut(s) 72
ErhI CCWWGG 1 cut(s) 54
FaqI GGGAC 1 cut(s) 951
FbaI TGATCA 1 cut(s) 486
Fnu4HI GCNGC 3 cut(s) 50, 237, 879
FokI GGATG 3 cut(s) 372, 786, 866
FriOI GRGCYC 1 cut(s) 274
Fsp4HI GCNGC 3 cut(s) 50, 237, 879
GlaI GCGC 2 cut(s) 72, 193
GluI GCNGC 3 cut(s) 50, 237, 879
GsaI CCCAGC 2 cut(s) 874, 990
GsuI CTGGAG 4 cut(s) 288, 375, 453, 533
HaeII RGCGCY 2 cut(s) 74, 195
HaeIII GGCC 5 cut(s) 59, 131, 157, 201, 539
HapII CCGG 5 cut(s) 158, 198, 202, 602, 931
HgaI GACGC 2 cut(s) 213, 437
HhaI GCGC 2 cut(s) 73, 194
Hin1I GRCGYC 2 cut(s) 71, 224
Hin6I GCGC 2 cut(s) 71, 192
HinP1I GCGC 2 cut(s) 71, 192
HincII GTYRAC 1 cut(s) 92
HindII GTYRAC 1 cut(s) 92
HinfI GANTC 7 cut(s) 19, 76, 88, 107, 260, 838, 996
HpaII CCGG 5 cut(s) 158, 198, 202, 602, 931
HphI GGTGA 2 cut(s) 172, 657
Hpy166II GTNNAC 5 cut(s) 92, 126, 756, 763, 1009
Hpy188I TCNGA 3 cut(s) 98, 106, 850
Hpy188III TCNNGA 8 cut(s) 16, 172, 305, 319, 512, 602, 715, 803
Hpy8I GTNNAC 5 cut(s) 92, 126, 756, 763, 1009
Hpy99I CGWCG 3 cut(s) 191, 229, 1004
HpyAV CCTTC 4 cut(s) 569, 799, 976, 1035
HpyCH4III ACNGT 3 cut(s) 583, 760, 965
HpyCH4IV ACGT 2 cut(s) 246, 387
HpyCH4V TGCA 3 cut(s) 527, 643, 881
HpyF10VI GCNNNNNNNGC 4 cut(s) 183, 198, 207, 221
HpyF3I CTNAG 4 cut(s) 173, 206, 463, 847
HpySE526I ACGT 2 cut(s) 246, 387
Hsp92I GRCGYC 2 cut(s) 71, 224
HspAI GCGC 2 cut(s) 71, 192
KasI GGCGCC 1 cut(s) 70
Kpn2I TCCGGA 1 cut(s) 601
KroI GCCGGC 1 cut(s) 201
KroNI GCCGGC 1 cut(s) 203
Ksp22I TGATCA 1 cut(s) 486
Kzo9I GATC 5 cut(s) 144, 162, 436, 486, 711
LmnI GCTCC 2 cut(s) 6, 269
Lsp1109I GCAGC 3 cut(s) 36, 248, 865
LweI GCATC 2 cut(s) 808, 844
MaeII ACGT 2 cut(s) 246, 387
MaeIII GTNAC 2 cut(s) 781, 865
MalI GATC 5 cut(s) 146, 164, 438, 488, 713
MboI GATC 5 cut(s) 144, 162, 436, 486, 711
MboII GAAGA 2 cut(s) 433, 746
MflI RGATCY 1 cut(s) 711
MhlI GDGCHC 1 cut(s) 274
MlsI TGGCCA 1 cut(s) 59
MluCI AATT 3 cut(s) 411, 507, 551
MluNI TGGCCA 1 cut(s) 59
Mly113I GGCGCC 1 cut(s) 71
MlyI GAGTC 2 cut(s) 97, 101
Mox20I TGGCCA 1 cut(s) 59
MroI TCCGGA 1 cut(s) 601
MroNI GCCGGC 1 cut(s) 201
MscI TGGCCA 1 cut(s) 59
MseI TTAA 4 cut(s) 405, 612, 708, 914
MslI CAYNNNNRTG 1 cut(s) 654
Msp20I TGGCCA 1 cut(s) 59
MspCI CTTAAG 1 cut(s) 611
MspI CCGG 5 cut(s) 158, 198, 202, 602, 931
MspR9I CCNGG 3 cut(s) 68, 183, 932
MvaI CCWGG 2 cut(s) 68, 183
MwoI GCNNNNNNNGC 4 cut(s) 183, 198, 207, 221
NaeI GCCGGC 1 cut(s) 203
NarI GGCGCC 1 cut(s) 71
NciI CCSGG 1 cut(s) 932
NdeII GATC 5 cut(s) 144, 162, 436, 486, 711
NgoMIV GCCGGC 1 cut(s) 201
NlaIV GGNNCC 2 cut(s) 72, 132
NmeAIII GCCGAG 2 cut(s) 111, 418
NmuCI GTSAC 2 cut(s) 781, 865
NspV TTCGAA 1 cut(s) 819
PaqCI CACCTGC 1 cut(s) 467
PcsI WCGNNNNNNNCGW 3 cut(s) 252, 303, 339
PdiI GCCGGC 1 cut(s) 203
PfeI GAWTC 5 cut(s) 19, 76, 260, 838, 996
PflFI GACNNNGTC 1 cut(s) 332
PfoI TCCNGGA 1 cut(s) 930
PkrI GCNGC 3 cut(s) 51, 238, 880
PleI GAGTC 2 cut(s) 96, 101
PluTI GGCGCC 1 cut(s) 74
PpsI GAGTC 2 cut(s) 96, 101
Psp124BI GAGCTC 1 cut(s) 274
Psp6I CCWGG 2 cut(s) 66, 181
PspFI CCCAGC 2 cut(s) 870, 986
PspGI CCWGG 2 cut(s) 66, 181
PspN4I GGNNCC 2 cut(s) 72, 132
PspPI GGNCC 1 cut(s) 130
PsuI RGATCY 1 cut(s) 711
PsyI GACNNNGTC 1 cut(s) 332
RsaI GTAC 5 cut(s) 127, 380, 625, 727, 762
RsaNI GTAC 5 cut(s) 126, 379, 624, 726, 761
RseI CAYNNNNRTG 1 cut(s) 654
SacI GAGCTC 1 cut(s) 274
SaqAI TTAA 4 cut(s) 405, 612, 708, 914
SatI GCNGC 3 cut(s) 50, 237, 879
Sau3AI GATC 5 cut(s) 144, 162, 436, 486, 711
Sau96I GGNCC 1 cut(s) 130
SchI GAGTC 2 cut(s) 97, 101
ScrFI CCNGG 3 cut(s) 68, 183, 932
SduI GDGCHC 1 cut(s) 274
SfaNI GCATC 2 cut(s) 808, 844
SfcI CTRYAG 2 cut(s) 151, 961
SfoI GGCGCC 1 cut(s) 72
SfuI TTCGAA 1 cut(s) 819
SmiMI CAYNNNNRTG 1 cut(s) 654
SmlI CTYRAG 1 cut(s) 611
SmoI CTYRAG 1 cut(s) 611
Sse9I AATT 3 cut(s) 411, 507, 551
SsiI CCGC 2 cut(s) 842, 923
SspDI GGCGCC 1 cut(s) 70
SspI AATATT 1 cut(s) 402
SstI GAGCTC 1 cut(s) 274
StyD4I CCNGG 3 cut(s) 66, 181, 930
StyI CCWWGG 1 cut(s) 54
TaaI ACNGT 3 cut(s) 583, 760, 965
TaiI ACGT 2 cut(s) 249, 390
TaqI TCGA 3 cut(s) 327, 819, 999
TasI AATT 3 cut(s) 411, 507, 551
TatI WGTACW 4 cut(s) 378, 623, 725, 760
TfiI GAWTC 5 cut(s) 19, 76, 260, 838, 996
Tru1I TTAA 4 cut(s) 405, 612, 708, 914
Tru9I TTAA 4 cut(s) 405, 612, 708, 914
TscAI CASTG 3 cut(s) 358, 529, 901
TseFI GTSAC 2 cut(s) 781, 865
TseI GCWGC 3 cut(s) 49, 236, 878
Tsp45I GTSAC 2 cut(s) 781, 865
TspDTI ATGAA 1 cut(s) 747
TspRI CASTG 3 cut(s) 358, 529, 901
Tth111I GACNNNGTC 1 cut(s) 332
Vha464I CTTAAG 1 cut(s) 611
XapI RAATTY 1 cut(s) 507
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.