MD03G1244800.v1.1

Gamma-glutamyl

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Reverse (-)
33155094 .. 33160059
4966 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1244800.v1.1.491

Sequence Viewer

Length: 1158 bp
ATGCCCTCCAGCTTCCTCACTAATTCCACGTCCACCCCAACACCCGACCCTTCCGAGTCCACCTCCTCCGACGTCCAAACCGCCGCCGTCTCACCAAAAACGACACCGGCAGAGATGTGGAGCTACCTCTGGATTGCTTTCCTAATCTCCTTGTCCAAAGAGCTGAGCTTGGCCAAGGCCCAGGTGCCGGTTCTCTTGCAGAGTCAACTCGGAACATCGGACTCGTCCTCGTCCAAGTGTACGGCCCCCGACCCCAAGATCAACTACCGGCCGGTGATCGGTATCCTGAGCCACCCTGGCGACGGCGCTTCTGGCCGGCTGAGCAACGCCTCCACGGCGTCGTATATCGCAGCTTCTTACGTCAAGTTCGTTGAATCGGCTGGAGCTCGTGTTATTCCTCTCATCTACAACGAGCCTCCCGATATACTTTTCCAGAAGCTTGACCTCGTCAATGGCGTGCTTTTCACCGGAGGATGGGCTAAAAGTGGTTTGTACTATGACGTTGCCGAGAGAATATTTAAGAAAATTATAGAGAAGAATGATGGTGGAGATCATTTTCCATTATACGCCATCTGCTTAGGTTTTGAACTTCTAGCAATGATCATCAGCAAGAACAAGAAAATTCTGGAGTCATTCAGTGCAGTAGATGCGGCCTCAACTTTACAATTTACCGAGAACGCCGTTATTGAAGGAACTGTTTTTCAAAGATTTCCTCCGGACTTGCTTAAGAAGTTGAGTACAGATTGTCTTGTAATGCAAAACCATAAATATGGTATCTCACCAGAGAGGCTTATGGAGAACGAGAATCTGTCGAGTTTCTTTAAGATCTTGACAACTTGTACTGATGAAGATGATAAGGTCTATGTGTCCACAGCACACGCATACAACTATCCTGTGACTGCCTTCCAATGGCATCCAGAGAAAAATGCTTTCGAATGGGGCTTACCAATGATTCCGCACTCAGAGGATGCTATTCAAGTGACCCAGCACGCTGCAAACTTCTTGGTCAGTGAGGCAAGGAAGTCATTAAACAGACCGCCTGTCCGGGAAGTCCTTGACAATCTCATCTACAACTACAGTCCCACTTTTTGTGGGAAGGCTGGGAGGGGATTCGACGAAGTTTACATCTTTACGCAACCTTCACTCGCTCATTTGTAA

Protein Analysis

386

Amino Acids

42.45

Weight (kDa)

5.54

Isoelectric Point (pI)

37.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C26 PF07722 91 - 307 3.3e-11 Peptidase C26
GATase PF00117 124 - 311 6.3e-10 Glutamine amidotransferase class-I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 75
AccB1I GGYRCC 1 cut(s) 184
AccIII TCCGGA 1 cut(s) 715
AciI CCGC 5 cut(s) 81, 84, 650, 956, 1037
AcoI YGGCCR 3 cut(s) 171, 269, 313
AcsI RAATTY 1 cut(s) 621
AcyI GRCGYC 2 cut(s) 72, 338
AfaI GTAC 4 cut(s) 241, 494, 739, 841
AfiI CCNNNNNNNGG 5 cut(s) 187, 278, 302, 474, 909
AflII CTTAAG 1 cut(s) 725
AgsI TTSAA 5 cut(s) 374, 587, 689, 704, 977
AhdI GACNNNNNGTC 1 cut(s) 1040
AjiI CACGTC 1 cut(s) 30
AjnI CCWGG 2 cut(s) 180, 295
AluBI AGCT 7 cut(s) 12, 123, 163, 168, 353, 386, 439
AluI AGCT 7 cut(s) 12, 123, 163, 168, 353, 386, 439
Alw21I GWGCWC 1 cut(s) 388
Alw26I GTCTC 1 cut(s) 94
Aor13HI TCCGGA 1 cut(s) 715
AoxI GGCC 6 cut(s) 171, 177, 243, 269, 313, 651
ApeKI GCWGC 2 cut(s) 350, 992
ApoI RAATTY 1 cut(s) 621
AspLEI GCGC 1 cut(s) 308
AspS9I GGNCC 2 cut(s) 178, 244
AsuC2I CCSGG 1 cut(s) 1046
AsuHPI GGTGA 4 cut(s) 84, 286, 457, 771
AsuII TTCGAA 1 cut(s) 933
BalI TGGCCA 1 cut(s) 173
BanI GGYRCC 1 cut(s) 184
BanII GRGCYC 1 cut(s) 388
BauI CACGAG 1 cut(s) 387
Bbv12I GWGCWC 1 cut(s) 388
BbvI GCAGC 2 cut(s) 362, 979
BccI CCATC 3 cut(s) 468, 536, 578
BceAI ACGGC 5 cut(s) 71, 258, 319, 351, 665
BciT130I CCWGG 2 cut(s) 182, 297
BciVI GTATCC 1 cut(s) 293
BclI TGATCA 1 cut(s) 600
BcnI CCSGG 1 cut(s) 1046
BcoDI GTCTC 1 cut(s) 94
BfaI CTAG 1 cut(s) 593
BfmI CTRYAG 1 cut(s) 1075
BfoI RGCGCY 1 cut(s) 309
BfrI CTTAAG 1 cut(s) 725
BfuI GTATCC 1 cut(s) 293
BglI GCCNNNNNGGC 2 cut(s) 297, 335
BglII AGATCT 1 cut(s) 825
BisI GCNGC 4 cut(s) 84, 351, 651, 993
BlpI GCTNAGC 2 cut(s) 164, 320
BlsI GCNGC 4 cut(s) 85, 352, 652, 994
Bme1390I CCNGG 3 cut(s) 182, 297, 1046
BmeRI GACNNNNNGTC 1 cut(s) 1040
BmgBI CACGTC 1 cut(s) 30
BmgT120I GGNCC 2 cut(s) 178, 244
BmiI GGNNCC 2 cut(s) 186, 246
BmrFI CCNGG 3 cut(s) 182, 297, 1046
BmsI GCATC 3 cut(s) 637, 922, 958
BplI GAGNNNNNCTC 2 cut(s) 47, 79
BpmI CTGGAG 2 cut(s) 402, 647
Bpu10I CCTNAGC 2 cut(s) 287, 577
Bpu1102I GCTNAGC 2 cut(s) 164, 320
Bpu14I TTCGAA 1 cut(s) 933
BpuMI CCSGG 1 cut(s) 1046
BsaBI GATNNNNATC 1 cut(s) 281
BsaHI GRCGYC 2 cut(s) 72, 338
BsaJI CCNNGG 4 cut(s) 174, 180, 295, 333
BsaWI WCCGGW 2 cut(s) 467, 715
BsaXI ACNNNNNCTCC 2 cut(s) 375, 405
Bsc4I CCNNNNNNNGG 5 cut(s) 187, 278, 302, 474, 909
Bse118I RCCGGY 5 cut(s) 106, 187, 267, 271, 315
Bse3DI GCAATG 1 cut(s) 603
Bse8I GATNNNNATC 1 cut(s) 281
BseAI TCCGGA 1 cut(s) 715
BseBI CCWGG 2 cut(s) 182, 297
BseDI CCNNGG 4 cut(s) 174, 180, 295, 333
BseGI GGATG 3 cut(s) 479, 913, 973
BseJI GATNNNNATC 1 cut(s) 281
BseLI CCNNNNNNNGG 5 cut(s) 187, 278, 302, 474, 909
BseMI GCAATG 1 cut(s) 603
BseMII CTCAG 4 cut(s) 155, 278, 311, 975
BseRI GAGGAG 1 cut(s) 55
BseX3I CGGCCG 1 cut(s) 269
BseXI GCAGC 2 cut(s) 362, 979
BseYI CCCAGC 2 cut(s) 984, 1100
BsgI GTGCAG 1 cut(s) 660
Bsh1285I CGRYCG 1 cut(s) 272
BshFI GGCC 6 cut(s) 173, 179, 245, 271, 315, 653
BshNI GGYRCC 1 cut(s) 184
BsiEI CGRYCG 1 cut(s) 272
BsiHKAI GWGCWC 1 cut(s) 388
BsiSI CCGG 8 cut(s) 107, 188, 268, 272, 316, 468, 716, 1045
BslFI GGGAC 1 cut(s) 1065
BslI CCNNNNNNNGG 5 cut(s) 187, 278, 302, 474, 909
BsmAI GTCTC 1 cut(s) 94
BsmBI CGTCTC 1 cut(s) 94
BsmFI GGGAC 1 cut(s) 1065
BsnI GGCC 6 cut(s) 173, 179, 245, 271, 315, 653
Bsp119I TTCGAA 1 cut(s) 933
Bsp1286I GDGCHC 1 cut(s) 388
Bsp13I TCCGGA 1 cut(s) 715
Bsp143I GATC 5 cut(s) 258, 276, 550, 600, 825
Bsp1720I GCTNAGC 2 cut(s) 164, 320
BspACI CCGC 5 cut(s) 81, 84, 650, 956, 1037
BspANI GGCC 6 cut(s) 173, 179, 245, 271, 315, 653
BspCNI CTCAG 4 cut(s) 156, 279, 312, 974
BspEI TCCGGA 1 cut(s) 715
BspLI GGNNCC 2 cut(s) 186, 246
BspT104I TTCGAA 1 cut(s) 933
BspT107I GGYRCC 1 cut(s) 184
BspTI CTTAAG 1 cut(s) 725
BsrDI GCAATG 1 cut(s) 603
BsrFI RCCGGY 5 cut(s) 106, 187, 267, 271, 315
BssAI RCCGGY 5 cut(s) 106, 187, 267, 271, 315
BssECI CCNNGG 4 cut(s) 174, 180, 295, 333
BssMI GATC 5 cut(s) 258, 276, 550, 600, 825
BssNI GRCGYC 2 cut(s) 72, 338
BssSI CACGAG 1 cut(s) 387
BssT1I CCWWGG 1 cut(s) 174
Bst2BI CACGAG 1 cut(s) 387
Bst2UI CCWGG 2 cut(s) 182, 297
Bst4CI ACNGT 2 cut(s) 697, 1079
BstACI GRCGYC 2 cut(s) 72, 338
BstAFI CTTAAG 1 cut(s) 725
BstAPI GCANNNNNTGC 1 cut(s) 647
BstBI TTCGAA 1 cut(s) 933
BstC8I GCNNGC 3 cut(s) 317, 458, 990
BstDEI CTNAG 5 cut(s) 164, 287, 320, 577, 961
BstDSI CCRYGG 1 cut(s) 333
BstF5I GGATG 3 cut(s) 479, 913, 973
BstH2I RGCGCY 1 cut(s) 309
BstHHI GCGC 1 cut(s) 308
BstKTI GATC 5 cut(s) 261, 279, 553, 603, 828
BstMAI GTCTC 1 cut(s) 94
BstMBI GATC 5 cut(s) 258, 276, 550, 600, 825
BstMCI CGRYCG 1 cut(s) 272
BstMWI GCNNNNNNNGC 5 cut(s) 297, 312, 321, 335, 647
BstNI CCWGG 2 cut(s) 182, 297
BstSCI CCNGG 3 cut(s) 180, 295, 1044
BstSFI CTRYAG 1 cut(s) 1075
BstV1I GCAGC 2 cut(s) 362, 979
BstX2I RGATCY 1 cut(s) 825
BstXI CCANNNNNNTGG 1 cut(s) 770
BstYI RGATCY 1 cut(s) 825
BstZI CGGCCG 1 cut(s) 269
BsuI GTATCC 1 cut(s) 293
BsuRI GGCC 6 cut(s) 173, 179, 245, 271, 315, 653
BtgI CCRYGG 1 cut(s) 333
BtrI CACGTC 1 cut(s) 30
BtsCI GGATG 3 cut(s) 479, 913, 973
BtsIMutI CAGTG 2 cut(s) 643, 1015
Cac8I GCNNGC 3 cut(s) 317, 458, 990
CfoI GCGC 1 cut(s) 308
Cfr10I RCCGGY 5 cut(s) 106, 187, 267, 271, 315
Cfr13I GGNCC 2 cut(s) 178, 244
CseI GACGC 1 cut(s) 327
Csp6I GTAC 4 cut(s) 240, 493, 738, 840
CviQI GTAC 4 cut(s) 240, 493, 738, 840
DdeI CTNAG 5 cut(s) 164, 287, 320, 577, 961
DpnI GATC 5 cut(s) 260, 278, 552, 602, 827
DpnII GATC 5 cut(s) 258, 276, 550, 600, 825
DriI GACNNNNNGTC 1 cut(s) 1040
EaeI YGGCCR 3 cut(s) 171, 269, 313
EagI CGGCCG 1 cut(s) 269
Eam1105I GACNNNNNGTC 1 cut(s) 1040
Ecl136II GAGCTC 1 cut(s) 386
EclXI CGGCCG 1 cut(s) 269
Eco130I CCWWGG 1 cut(s) 174
Eco24I GRGCYC 1 cut(s) 388
Eco52I CGGCCG 1 cut(s) 269
Eco53kI GAGCTC 1 cut(s) 386
EcoICRI GAGCTC 1 cut(s) 386
EcoRII CCWGG 2 cut(s) 180, 295
EcoT14I CCWWGG 1 cut(s) 174
EcoT38I GRGCYC 1 cut(s) 388
ErhI CCWWGG 1 cut(s) 174
Esp3I CGTCTC 1 cut(s) 94
FaqI GGGAC 1 cut(s) 1065
FbaI TGATCA 1 cut(s) 600
Fnu4HI GCNGC 4 cut(s) 84, 351, 651, 993
FokI GGATG 3 cut(s) 486, 900, 980
FriOI GRGCYC 1 cut(s) 388
Fsp4HI GCNGC 4 cut(s) 84, 351, 651, 993
FspBI CTAG 1 cut(s) 593
GlaI GCGC 1 cut(s) 307
GluI GCNGC 4 cut(s) 84, 351, 651, 993
GsaI CCCAGC 2 cut(s) 988, 1104
GsuI CTGGAG 2 cut(s) 402, 647
HaeII RGCGCY 1 cut(s) 309
HaeIII GGCC 6 cut(s) 173, 179, 245, 271, 315, 653
HapII CCGG 8 cut(s) 107, 188, 268, 272, 316, 468, 716, 1045
HgaI GACGC 1 cut(s) 327
HhaI GCGC 1 cut(s) 308
Hin1I GRCGYC 2 cut(s) 72, 338
Hin6I GCGC 1 cut(s) 306
HinP1I GCGC 1 cut(s) 306
HincII GTYRAC 1 cut(s) 206
HindII GTYRAC 1 cut(s) 206
HindIII AAGCTT 1 cut(s) 437
HinfI GANTC 8 cut(s) 56, 202, 221, 374, 629, 805, 952, 1110
HpaII CCGG 8 cut(s) 107, 188, 268, 272, 316, 468, 716, 1045
HphI GGTGA 4 cut(s) 84, 286, 457, 771
Hpy166II GTNNAC 6 cut(s) 33, 60, 206, 240, 870, 1123
Hpy188I TCNGA 5 cut(s) 55, 70, 212, 220, 964
Hpy188III TCNNGA 8 cut(s) 130, 286, 419, 433, 626, 716, 829, 917
Hpy8I GTNNAC 6 cut(s) 33, 60, 206, 240, 870, 1123
Hpy99I CGWCG 4 cut(s) 74, 305, 343, 1118
HpyAV CCTTC 5 cut(s) 60, 683, 913, 1090, 1149
HpyCH4III ACNGT 2 cut(s) 697, 1079
HpyCH4IV ACGT 4 cut(s) 29, 72, 360, 501
HpyCH4V TGCA 4 cut(s) 199, 641, 757, 995
HpyF10VI GCNNNNNNNGC 5 cut(s) 297, 312, 321, 335, 647
HpyF3I CTNAG 5 cut(s) 164, 287, 320, 577, 961
HpySE526I ACGT 4 cut(s) 29, 72, 360, 501
Hsp92I GRCGYC 2 cut(s) 72, 338
HspAI GCGC 1 cut(s) 306
Kpn2I TCCGGA 1 cut(s) 715
KroI GCCGGC 1 cut(s) 315
KroNI GCCGGC 1 cut(s) 317
Ksp22I TGATCA 1 cut(s) 600
Kzo9I GATC 5 cut(s) 258, 276, 550, 600, 825
LmnI GCTCC 2 cut(s) 120, 383
Lsp1109I GCAGC 2 cut(s) 362, 979
LweI GCATC 3 cut(s) 637, 922, 958
MaeI CTAG 1 cut(s) 593
MaeII ACGT 4 cut(s) 29, 72, 360, 501
MaeIII GTNAC 2 cut(s) 895, 979
MalI GATC 5 cut(s) 260, 278, 552, 602, 827
MboI GATC 5 cut(s) 258, 276, 550, 600, 825
MboII GAAGA 2 cut(s) 547, 860
MflI RGATCY 1 cut(s) 825
MhlI GDGCHC 1 cut(s) 388
MlsI TGGCCA 1 cut(s) 173
MluCI AATT 4 cut(s) 22, 525, 621, 665
MluNI TGGCCA 1 cut(s) 173
MlyI GAGTC 4 cut(s) 65, 211, 215, 638
MmeI TCCRAC 1 cut(s) 93
Mox20I TGGCCA 1 cut(s) 173
MroI TCCGGA 1 cut(s) 715
MroNI GCCGGC 1 cut(s) 315
MscI TGGCCA 1 cut(s) 173
MseI TTAA 4 cut(s) 519, 726, 822, 1028
MslI CAYNNNNRTG 1 cut(s) 768
Msp20I TGGCCA 1 cut(s) 173
MspCI CTTAAG 1 cut(s) 725
MspI CCGG 8 cut(s) 107, 188, 268, 272, 316, 468, 716, 1045
MspR9I CCNGG 3 cut(s) 182, 297, 1046
MvaI CCWGG 2 cut(s) 182, 297
MwoI GCNNNNNNNGC 5 cut(s) 297, 312, 321, 335, 647
NaeI GCCGGC 1 cut(s) 317
NciI CCSGG 1 cut(s) 1046
NdeII GATC 5 cut(s) 258, 276, 550, 600, 825
NgoMIV GCCGGC 1 cut(s) 315
NlaIV GGNNCC 2 cut(s) 186, 246
NmeAIII GCCGAG 1 cut(s) 532
NmuCI GTSAC 2 cut(s) 895, 979
NspV TTCGAA 1 cut(s) 933
PcsI WCGNNNNNNNCGW 3 cut(s) 366, 417, 453
PdiI GCCGGC 1 cut(s) 317
PfeI GAWTC 4 cut(s) 374, 805, 952, 1110
PflFI GACNNNGTC 1 cut(s) 446
PfoI TCCNGGA 1 cut(s) 1044
PkrI GCNGC 4 cut(s) 85, 352, 652, 994
PleI GAGTC 4 cut(s) 64, 210, 215, 637
PpsI GAGTC 4 cut(s) 64, 210, 215, 637
Psp124BI GAGCTC 1 cut(s) 388
Psp6I CCWGG 2 cut(s) 180, 295
PspFI CCCAGC 2 cut(s) 984, 1100
PspGI CCWGG 2 cut(s) 180, 295
PspN4I GGNNCC 2 cut(s) 186, 246
PspPI GGNCC 2 cut(s) 178, 244
PsuI RGATCY 1 cut(s) 825
PsyI GACNNNGTC 1 cut(s) 446
RsaI GTAC 4 cut(s) 241, 494, 739, 841
RsaNI GTAC 4 cut(s) 240, 493, 738, 840
RseI CAYNNNNRTG 1 cut(s) 768
SacI GAGCTC 1 cut(s) 388
SaqAI TTAA 4 cut(s) 519, 726, 822, 1028
SatI GCNGC 4 cut(s) 84, 351, 651, 993
Sau3AI GATC 5 cut(s) 258, 276, 550, 600, 825
Sau96I GGNCC 2 cut(s) 178, 244
SchI GAGTC 4 cut(s) 65, 211, 215, 638
ScrFI CCNGG 3 cut(s) 182, 297, 1046
SduI GDGCHC 1 cut(s) 388
SfaNI GCATC 3 cut(s) 637, 922, 958
SfcI CTRYAG 1 cut(s) 1075
SfuI TTCGAA 1 cut(s) 933
SmiMI CAYNNNNRTG 1 cut(s) 768
SmlI CTYRAG 1 cut(s) 725
SmoI CTYRAG 1 cut(s) 725
Sse9I AATT 4 cut(s) 22, 525, 621, 665
SsiI CCGC 5 cut(s) 81, 84, 650, 956, 1037
SspI AATATT 1 cut(s) 516
SspMI CTAG 1 cut(s) 593
SstI GAGCTC 1 cut(s) 388
StyD4I CCNGG 3 cut(s) 180, 295, 1044
StyI CCWWGG 1 cut(s) 174
TaaI ACNGT 2 cut(s) 697, 1079
TaiI ACGT 4 cut(s) 32, 75, 363, 504
TaqI TCGA 3 cut(s) 812, 933, 1113
TasI AATT 4 cut(s) 22, 525, 621, 665
TatI WGTACW 3 cut(s) 492, 737, 839
TauI GCSGC 2 cut(s) 86, 653
TfiI GAWTC 4 cut(s) 374, 805, 952, 1110
Tru1I TTAA 4 cut(s) 519, 726, 822, 1028
Tru9I TTAA 4 cut(s) 519, 726, 822, 1028
TscAI CASTG 2 cut(s) 643, 1015
TseFI GTSAC 2 cut(s) 895, 979
TseI GCWGC 2 cut(s) 350, 992
Tsp45I GTSAC 2 cut(s) 895, 979
TspDTI ATGAA 1 cut(s) 861
TspRI CASTG 2 cut(s) 643, 1015
Tth111I GACNNNGTC 1 cut(s) 446
Vha464I CTTAAG 1 cut(s) 725
XapI RAATTY 1 cut(s) 621
XspI CTAG 1 cut(s) 593
ZraI GACGTC 1 cut(s) 73
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.