Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0009307

Physical Location & Seq

Genomic Coordinates Reverse (-)

37492626 .. 37494386

Gene Structure 1761 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1299000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGAGCAGCTGCTGAGCATGGGCTTCCCCAGCGAGTTGGCGGCCCAAGCCCTAGCTGCCACAGGGACAGGGGGCAACTCCATTCTCAAGGCCACAGAATGGATTCTCAACCGCGAATCATCCACATCCGCCGGCACTAGCACGAATCCGAGCCCGATTTCATCCGGGCGGCCTTGCCAACCCAAGCTCGACCGCTTCTTTCTGTTCCAGTCCAAGCCTCCTTCCTCCGATTATCCGCGTCCCGTCCCCGCTTCCGCTCGCAAACTACAAGAGGAATCGGAATCCACCCCAGCCGCAGGGGGAGAGGGGCCAGAAGAAGAAGCTGCACTCTCCAAGTCGAAACGTCTCAAACTAGCGATCCCAGCAAACCCCAAAAATGCCAACAAAACCACCAACGAGCCGTTATCGGAGCGCATGCGCCCTCGCACCTTAGACGACGTCGTGGGCCAAGACCACCTACTTGCCCCAAACTCTCTGCTCCGCTCCGCAATCGACTGCGAACGTCTCCCTTCTCTTGTGTTCTGGGGTCCACCAGGCGTCGGCAAGACCTCCATTGCCAAATCCATCATCAATTCCGCCTCCCGCCCTTGCTCCTCCTACCGATTCGTTTCGTTGTCCGCCGTCACTTGCGGGGTTAAAGACGTGAGGGACGCTATCGACGAGGCCCGCAAGAAGAAACAGGCGGCTAAGAAAAAACAAACAGTGCTGTTCGTGGACGAGGTTCACAGGTTCAACAAGTCACAGCAGGACTCGTTCTTGCCCGTCATCGAAGACGGCAGTATAGTCTTCATGGGGGCCACCACCGAGAACCCTTCCTTCCATTTGATCAGGCCGCTCTTGTCTCGCTGCCGAGTTCTTGTTCTCCACCCTCTGAGACCCCACGCGGTTGAGCTCCTTCTCAAGCGGGCCGCCAATGACTCCGATAAGGGATTGGCTCCTGGTGTGCAGATGCCTGTACATGTCAATGATGAGGCCATCCATTTCATCTCCGCCAACTGCGATGGCGATGCTCGGGTGGCACTCAATGCCTTGGAAGTTTCTGCAACAACAGCAGCTGCCCGAGCGGCCTCTACCTCTAGTTCCACGATCTCTAACTCTACCCCTACCTCTATGAATGATGATGATGATCATAATAAGTTAGTGGCTACTGCTGTTGTTACCTTAGAGGATGCCAAAGAGGCTTTGCAATGCAAACATGTCGCCTCTGACAAAGCGGGGGAAGAGCACTATAATCTCATCAGTGCCCTTCACAAGTCCATGAGAGGAAGTGATGCTAATGCGGCCATTTATTGGTTGGCAAGGATGCTAGAAGGAGGCCAAGAACCTCTATATATTGCCCGCCGACTCATACGGTTTGCTAGTGAAGATGTTGGGTTGGCTGACCCATCCGCTCTGAGCCAGGCCGTTGCTTGTCATCAGGCTTGCCATTTTCTGGGAATGCCAGAGTGCAATGTCATTCTTGCACAGTGTGTGGCTTACTTGGCATTGGCTCCTAAATCTGTCGCTGTTTATAAAGCAATAGGGAGTGCACAACAAGTGGTGAGGGACTCTGTCGGACAGAATGAGGGAGTGCCTCTTCATCTGAGGAATGCGCCTACCAAGCTAATGAAGGAACTTGGGTATGCCAACGGATACATTTACCCTCCTGACAATCCCTCAGCCAGTGCCACGCAGGCATATCTACCACCCTCACTTGAAGGTTACAAGTTCCTGGATTGGCCGATCACTAGTAATAGCACCAAAACCAAATCCGATGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000731 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006275 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010556 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030174 GO:0031323 GO:0031326 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0071897 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901362 GO:1901576 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc_2 MgsA_C UBA

Protein Analysis

587

Amino Acids

62.94

Weight (kDa)

7.58

Isoelectric Point (pI)

45.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_7	PF22562	1 - 38	1.8e-07	UBA-like domain
RuvB_N	PF05496	139 - 262	4.4e-09	Holliday junction DNA helicase RuvB P-loop domain
AAA_5	PF07728	172 - 268	7.8e-06	AAA domain (dynein-related subfamily)
AAA	PF00004	173 - 288	1e-16	ATPase family associated with various cellular activities (AAA)
AAA_assoc_2	PF16193	318 - 421	1e-21	AAA C-terminal domain
MgsA_C	PF12002	422 - 572	8.6e-59	MgsA AAA+ ATPase C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24290
fragaria_vesca	FvH4_5g33930 FvH4_5g33930
malus_domestica	MD03G1299000.v1.1
pyrus_communis	pycom03g23710
rosa_chinensis	RchiOBHm_Chr7g0233321
rosa_laevigata	RLG00000001279
rosa_multiflora	Rmu_sc0000863.1_g000006 Rmu_sc0000863.1_g000007 Rmu_sc0000863.1_g000049 Rmu_sc0003865.1_g000005 Rmu_sc0010461.1_g000001
rosa_roxburghii	Rroxscaffold_3G00227410
rosa_rugosa	Rorug07G0279900 Rorug07G0279900
rosa_samantha	Rh7AG435800 Rh7BG408100 Rh7BG408500 Rh7CG455000 Rh7DG424500 Rh7DG424900
rosa_wichuraiana	Rw7G035840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1512
AatII	GACGTC	1 cut(s)	441
AccB7I	CCANNNNNTGG	3 cut(s)	99, 1290, 1432
AccBSI	CCGCTC	5 cut(s)	257, 483, 835, 1064, 1391
AccII	CGCG	3 cut(s)	114, 238, 884
AclWI	GGATC	1 cut(s)	352
AcoI	YGGCCR	2 cut(s)	1281, 1718
AcyI	GRCGYC	2 cut(s)	438, 537
AdeI	CACNNNGTG	1 cut(s)	1469
AfaI	GTAC	1 cut(s)	957
AfiI	CCNNNNNNNGG	5 cut(s)	99, 296, 539, 1290, 1432
AflIII	ACRYGT	2 cut(s)	958, 1195
AgsI	TTSAA	2 cut(s)	733, 1697
AhlI	ACTAGT	1 cut(s)	1727
AjiI	CACGTC	1 cut(s)	643
AjnI	CCWGG	4 cut(s)	532, 937, 1398, 1710
AluBI	AGCT	7 cut(s)	10, 56, 187, 323, 892, 1055, 1603
AluI	AGCT	7 cut(s)	10, 56, 187, 323, 892, 1055, 1603
Alw21I	GWGCWC	3 cut(s)	894, 1227, 1531
Alw26I	GTCTC	4 cut(s)	350, 509, 846, 868
Alw44I	GTGCAC	1 cut(s)	1527
AlwI	GGATC	1 cut(s)	352
AlwNI	CAGNNNCTG	2 cut(s)	13, 1055
Ama87I	CYCGRG	2 cut(s)	1011, 1059
ApaLI	GTGCAC	1 cut(s)	1527
ApeKI	GCWGC	7 cut(s)	7, 10, 56, 323, 846, 1052, 1055
Asp700I	GAANNNNTTC	1 cut(s)	102
AspLEI	GCGC	3 cut(s)	414, 420, 1594
AspS9I	GGNCC	7 cut(s)	43, 308, 445, 527, 664, 795, 906
AsuC2I	CCSGG	1 cut(s)	166
AsuHPI	GGTGA	1 cut(s)	1552
AvaI	CYCGRG	2 cut(s)	1011, 1059
AvaII	GGWCC	1 cut(s)	527
BaeGI	GKGCMC	2 cut(s)	1246, 1531
BanII	GRGCYC	2 cut(s)	155, 894
BbsI	GAAGAC	2 cut(s)	777, 778
Bbv12I	GWGCWC	3 cut(s)	894, 1227, 1531
BbvCI	CCTCAGC	1 cut(s)	1657
BbvI	GCAGC	6 cut(s)	19, 43, 310, 833, 1042, 1064
BccI	CCATC	5 cut(s)	572, 983, 995, 1393, 1748
BceAI	ACGGC	4 cut(s)	385, 605, 790, 1388
BcgI	CGANNNNNNTGC	4 cut(s)	989, 1023, 1180, 1214
BciT130I	CCWGG	4 cut(s)	534, 939, 1400, 1712
BciVI	GTATCC	1 cut(s)	1625
BclI	TGATCA	2 cut(s)	825, 1126
BcnI	CCSGG	1 cut(s)	166
BcoDI	GTCTC	4 cut(s)	350, 509, 846, 868
BcuI	ACTAGT	1 cut(s)	1727
BfaI	CTAG	7 cut(s)	53, 138, 353, 1077, 1307, 1359, 1728
BfuI	GTATCC	1 cut(s)	1625
BglI	GCCNNNNNGGC	3 cut(s)	1064, 1178, 1673
BlpI	GCTNAGC	1 cut(s)	14
Bme1390I	CCNGG	5 cut(s)	166, 534, 939, 1400, 1712
Bme18I	GGWCC	1 cut(s)	527
BmeT110I	CYCGRG	2 cut(s)	1011, 1059
BmgBI	CACGTC	1 cut(s)	643
BmgT120I	GGNCC	7 cut(s)	43, 308, 445, 527, 664, 795, 906
BmiI	GGNNCC	5 cut(s)	309, 528, 796, 936, 1491
BmrFI	CCNGG	5 cut(s)	166, 534, 939, 1400, 1712
BmsI	GCATC	5 cut(s)	939, 997, 1159, 1261, 1293
BpiI	GAAGAC	2 cut(s)	777, 778
Bpu10I	CCTNAGC	1 cut(s)	1657
Bpu1102I	GCTNAGC	1 cut(s)	14
BpuEI	CTTGAG	2 cut(s)	71, 884
BpuMI	CCSGG	1 cut(s)	166
BsaBI	GATNNNNATC	1 cut(s)	1125
BsaHI	GRCGYC	2 cut(s)	438, 537
BsaI	GGTCTC	1 cut(s)	868
BsaJI	CCNNGG	1 cut(s)	1029
Bsc4I	CCNNNNNNNGG	5 cut(s)	99, 296, 539, 1290, 1432
Bse118I	RCCGGY	1 cut(s)	131
Bse1I	ACTGG	2 cut(s)	208, 1662
Bse3DI	GCAATG	3 cut(s)	552, 1193, 1456
Bse8I	GATNNNNATC	1 cut(s)	1125
BseBI	CCWGG	4 cut(s)	534, 939, 1400, 1712
BseDI	CCNNGG	1 cut(s)	1029
BseGI	GGATG	7 cut(s)	119, 125, 161, 975, 1174, 1308, 1385
BseJI	GATNNNNATC	1 cut(s)	1125
BseLI	CCNNNNNNNGG	5 cut(s)	99, 296, 539, 1290, 1432
BseMI	GCAATG	3 cut(s)	552, 1193, 1456
BseMII	CTCAG	5 cut(s)	5, 863, 1385, 1574, 1671
BseNI	ACTGG	2 cut(s)	208, 1662
BseRI	GAGGAG	1 cut(s)	583
BseSI	GKGCMC	2 cut(s)	1246, 1531
BseXI	GCAGC	6 cut(s)	19, 43, 310, 833, 1042, 1064
BseYI	CCCAGC	3 cut(s)	29, 289, 361
BsgI	GTGCAG	2 cut(s)	309, 965
Bsh1236I	CGCG	3 cut(s)	114, 238, 884
Bsh1285I	CGRYCG	1 cut(s)	193
BsiEI	CGRYCG	1 cut(s)	193
BsiHKAI	GWGCWC	3 cut(s)	894, 1227, 1531
BsiHKCI	CYCGRG	2 cut(s)	1011, 1059
BsiSI	CCGG	2 cut(s)	132, 165
BslFI	GGGAC	5 cut(s)	79, 225, 230, 662, 1559
BslI	CCNNNNNNNGG	5 cut(s)	99, 296, 539, 1290, 1432
BsmAI	GTCTC	4 cut(s)	350, 509, 846, 868
BsmBI	CGTCTC	2 cut(s)	350, 509
BsmFI	GGGAC	5 cut(s)	79, 225, 230, 662, 1559
BsmI	GAATGC	2 cut(s)	1443, 1594
Bso31I	GGTCTC	1 cut(s)	868
BsoBI	CYCGRG	2 cut(s)	1011, 1059
Bsp1286I	GDGCHC	5 cut(s)	155, 894, 1227, 1246, 1531
Bsp1407I	TGTACA	1 cut(s)	955
Bsp143I	GATC	5 cut(s)	357, 825, 1086, 1126, 1722
Bsp1720I	GCTNAGC	1 cut(s)	14
BspCNI	CTCAG	5 cut(s)	6, 864, 1386, 1575, 1670
BspFNI	CGCG	3 cut(s)	114, 238, 884
BspLI	GGNNCC	5 cut(s)	309, 528, 796, 936, 1491
BspPI	GGATC	1 cut(s)	352
BspQI	GCTCTTC	1 cut(s)	1215
BspTNI	GGTCTC	1 cut(s)	868
BsrBI	CCGCTC	5 cut(s)	257, 483, 835, 1064, 1391
BsrDI	GCAATG	3 cut(s)	552, 1193, 1456
BsrFI	RCCGGY	1 cut(s)	131
BsrGI	TGTACA	1 cut(s)	955
BsrI	ACTGG	2 cut(s)	208, 1662
BssAI	RCCGGY	1 cut(s)	131
BssECI	CCNNGG	1 cut(s)	1029
BssMI	GATC	5 cut(s)	357, 825, 1086, 1126, 1722
BssNI	GRCGYC	2 cut(s)	438, 537
BssT1I	CCWWGG	1 cut(s)	1029
Bst2UI	CCWGG	4 cut(s)	534, 939, 1400, 1712
Bst4CI	ACNGT	3 cut(s)	703, 1353, 1467
Bst6I	CTCTTC	2 cut(s)	1215, 1581
BstACI	GRCGYC	2 cut(s)	438, 537
BstAPI	GCANNNNNTGC	1 cut(s)	1025
BstAUI	TGTACA	1 cut(s)	955
BstC8I	GCNNGC	8 cut(s)	133, 259, 416, 667, 906, 1339, 1423, 1674
BstDEI	CTNAG	8 cut(s)	14, 430, 687, 872, 1162, 1394, 1583, 1657
BstF5I	GGATG	7 cut(s)	119, 125, 161, 975, 1174, 1308, 1385
BstFNI	CGCG	3 cut(s)	114, 238, 884
BstHHI	GCGC	3 cut(s)	414, 420, 1594
BstKTI	GATC	5 cut(s)	360, 828, 1089, 1129, 1725
BstMAI	GTCTC	4 cut(s)	350, 509, 846, 868
BstMBI	GATC	5 cut(s)	357, 825, 1086, 1126, 1722
BstMCI	CGRYCG	1 cut(s)	193
BstNI	CCWGG	4 cut(s)	534, 939, 1400, 1712
BstNSI	RCATGY	3 cut(s)	418, 962, 1199
BstSCI	CCNGG	5 cut(s)	164, 532, 937, 1398, 1710
BstSLI	GKGCMC	2 cut(s)	1246, 1531
BstUI	CGCG	3 cut(s)	114, 238, 884
BstV1I	GCAGC	6 cut(s)	19, 43, 310, 833, 1042, 1064
BstV2I	GAAGAC	2 cut(s)	777, 778
BstXI	CCANNNNNNTGG	1 cut(s)	37
BsuI	GTATCC	1 cut(s)	1625
BtgZI	GCGATG	2 cut(s)	1014, 1020
BtrI	CACGTC	1 cut(s)	643
BtsCI	GGATG	7 cut(s)	119, 125, 161, 975, 1174, 1308, 1385
BtsIMutI	CAGTG	4 cut(s)	708, 1246, 1472, 1669
Cac8I	GCNNGC	8 cut(s)	133, 259, 416, 667, 906, 1339, 1423, 1674
CaiI	CAGNNNCTG	2 cut(s)	13, 1055
CfoI	GCGC	3 cut(s)	414, 420, 1594
Cfr10I	RCCGGY	1 cut(s)	131
Cfr13I	GGNCC	7 cut(s)	43, 308, 445, 527, 664, 795, 906
CseI	GACGC	3 cut(s)	227, 526, 659
Csp6I	GTAC	1 cut(s)	956
CviAII	CATG	6 cut(s)	19, 415, 790, 959, 1196, 1258
CviQI	GTAC	1 cut(s)	956
DdeI	CTNAG	8 cut(s)	14, 430, 687, 872, 1162, 1394, 1583, 1657
DpnI	GATC	5 cut(s)	359, 827, 1088, 1128, 1724
DpnII	GATC	5 cut(s)	357, 825, 1086, 1126, 1722
DraIII	CACNNNGTG	1 cut(s)	1469
EaeI	YGGCCR	2 cut(s)	1281, 1718
Eam1104I	CTCTTC	2 cut(s)	1215, 1581
EarI	CTCTTC	2 cut(s)	1215, 1581
EciI	GGCGGA	4 cut(s)	118, 565, 607, 979
Ecl136II	GAGCTC	1 cut(s)	892
Eco130I	CCWWGG	1 cut(s)	1029
Eco24I	GRGCYC	2 cut(s)	155, 894
Eco31I	GGTCTC	1 cut(s)	868
Eco47I	GGWCC	1 cut(s)	527
Eco53kI	GAGCTC	1 cut(s)	892
Eco88I	CYCGRG	2 cut(s)	1011, 1059
EcoICRI	GAGCTC	1 cut(s)	892
EcoRII	CCWGG	4 cut(s)	532, 937, 1398, 1710
EcoT14I	CCWWGG	1 cut(s)	1029
EcoT38I	GRGCYC	2 cut(s)	155, 894
ErhI	CCWWGG	1 cut(s)	1029
Esp3I	CGTCTC	2 cut(s)	350, 509
FaeI	CATG	6 cut(s)	22, 418, 793, 962, 1199, 1261
FaqI	GGGAC	5 cut(s)	79, 225, 230, 662, 1559
FatI	CATG	6 cut(s)	18, 414, 789, 958, 1195, 1257
FauI	CCCGC	7 cut(s)	256, 590, 623, 674, 897, 1207, 1346
FbaI	TGATCA	2 cut(s)	825, 1126
FokI	GGATG	7 cut(s)	106, 112, 148, 962, 1181, 1315, 1372
FriOI	GRGCYC	2 cut(s)	155, 894
FspBI	CTAG	7 cut(s)	53, 138, 353, 1077, 1307, 1359, 1728
GlaI	GCGC	3 cut(s)	413, 419, 1593
GsaI	CCCAGC	3 cut(s)	33, 293, 365
HapII	CCGG	2 cut(s)	132, 165
HgaI	GACGC	3 cut(s)	227, 526, 659
HhaI	GCGC	3 cut(s)	414, 420, 1594
Hin1I	GRCGYC	2 cut(s)	438, 537
Hin1II	CATG	6 cut(s)	22, 418, 793, 962, 1199, 1261
Hin6I	GCGC	3 cut(s)	412, 418, 1592
HinP1I	GCGC	3 cut(s)	412, 418, 1592
HpaII	CCGG	2 cut(s)	132, 165
HphI	GGTGA	1 cut(s)	1552
Hpy166II	GTNNAC	4 cut(s)	530, 715, 724, 1529
Hpy188III	TCNNGA	1 cut(s)	1646
Hpy8I	GTNNAC	4 cut(s)	530, 715, 724, 1529
Hpy99I	CGWCG	4 cut(s)	440, 443, 542, 662
HpyAV	CCTTC	9 cut(s)	231, 519, 822, 826, 905, 1256, 1304, 1603, 1691
HpyCH4III	ACNGT	3 cut(s)	703, 1353, 1467
HpyCH4IV	ACGT	4 cut(s)	343, 438, 502, 642
HpyCH4V	TGCA	8 cut(s)	326, 946, 1043, 1186, 1191, 1449, 1463, 1529
HpyF3I	CTNAG	8 cut(s)	14, 430, 687, 872, 1162, 1394, 1583, 1657
HpySE526I	ACGT	4 cut(s)	343, 438, 502, 642
Hsp92I	GRCGYC	2 cut(s)	438, 537
Hsp92II	CATG	6 cut(s)	22, 418, 793, 962, 1199, 1261
HspAI	GCGC	3 cut(s)	412, 418, 1592
KroI	GCCGGC	1 cut(s)	131
KroNI	GCCGGC	1 cut(s)	133
Ksp22I	TGATCA	2 cut(s)	825, 1126
Kzo9I	GATC	5 cut(s)	357, 825, 1086, 1126, 1722
LguI	GCTCTTC	1 cut(s)	1215
LmnI	GCTCC	8 cut(s)	4, 409, 483, 488, 596, 897, 940, 1495
Lsp1109I	GCAGC	6 cut(s)	19, 43, 310, 833, 1042, 1064
LweI	GCATC	5 cut(s)	939, 997, 1159, 1261, 1293
MaeI	CTAG	7 cut(s)	53, 138, 353, 1077, 1307, 1359, 1728
MaeII	ACGT	4 cut(s)	343, 438, 502, 642
MaeIII	GTNAC	4 cut(s)	622, 738, 1156, 1700
MalI	GATC	5 cut(s)	359, 827, 1088, 1128, 1724
MbiI	CCGCTC	5 cut(s)	257, 483, 835, 1064, 1391
MboI	GATC	5 cut(s)	357, 825, 1086, 1126, 1722
MboII	GAAGA	8 cut(s)	326, 329, 685, 778, 782, 1232, 1376, 1568
MhlI	GDGCHC	5 cut(s)	155, 894, 1227, 1246, 1531
MluCI	AATT	1 cut(s)	571
MlyI	GAGTC	4 cut(s)	743, 911, 1338, 1541
MmeI	TCCRAC	1 cut(s)	1534
MroNI	GCCGGC	1 cut(s)	131
MroXI	GAANNNNTTC	1 cut(s)	102
MseI	TTAA	1 cut(s)	636
MslI	CAYNNNNRTG	1 cut(s)	963
MspA1I	CMGCKG	2 cut(s)	10, 1055
MspI	CCGG	2 cut(s)	132, 165
MspR9I	CCNGG	5 cut(s)	166, 534, 939, 1400, 1712
Mva1269I	GAATGC	2 cut(s)	1443, 1594
MvaI	CCWGG	4 cut(s)	534, 939, 1400, 1712
MvnI	CGCG	3 cut(s)	114, 238, 884
NaeI	GCCGGC	1 cut(s)	133
NciI	CCSGG	1 cut(s)	166
NdeII	GATC	5 cut(s)	357, 825, 1086, 1126, 1722
NgoMIV	GCCGGC	1 cut(s)	131
NlaIII	CATG	6 cut(s)	22, 418, 793, 962, 1199, 1261
NlaIV	GGNNCC	5 cut(s)	309, 528, 796, 936, 1491
NmeAIII	GCCGAG	1 cut(s)	875
NmuCI	GTSAC	2 cut(s)	622, 738
NspI	RCATGY	3 cut(s)	418, 962, 1199
PaeI	GCATGC	1 cut(s)	418
PciI	ACATGT	2 cut(s)	958, 1195
PciSI	GCTCTTC	1 cut(s)	1215
PcsI	WCGNNNNNNNCGW	1 cut(s)	657
PctI	GAATGC	2 cut(s)	1443, 1594
PdiI	GCCGGC	1 cut(s)	133
PdmI	GAANNNNTTC	1 cut(s)	102
PfeI	GAWTC	6 cut(s)	103, 116, 145, 275, 281, 603
PflFI	GACNNNGTC	2 cut(s)	437, 1550
PflMI	CCANNNNNTGG	3 cut(s)	99, 1290, 1432
PfoI	TCCNGGA	1 cut(s)	1710
PleI	GAGTC	4 cut(s)	743, 911, 1338, 1541
PpsI	GAGTC	4 cut(s)	743, 911, 1338, 1541
PscI	ACATGT	2 cut(s)	958, 1195
PsiI	TTATAA	1 cut(s)	1512
Psp124BI	GAGCTC	1 cut(s)	894
Psp6I	CCWGG	4 cut(s)	532, 937, 1398, 1710
PspFI	CCCAGC	3 cut(s)	29, 289, 361
PspGI	CCWGG	4 cut(s)	532, 937, 1398, 1710
PspN4I	GGNNCC	5 cut(s)	309, 528, 796, 936, 1491
PspPI	GGNCC	7 cut(s)	43, 308, 445, 527, 664, 795, 906
PstNI	CAGNNNCTG	2 cut(s)	13, 1055
PsyI	GACNNNGTC	2 cut(s)	437, 1550
PvuII	CAGCTG	2 cut(s)	10, 1055
RsaI	GTAC	1 cut(s)	957
RsaNI	GTAC	1 cut(s)	956
RseI	CAYNNNNRTG	1 cut(s)	963
SacI	GAGCTC	1 cut(s)	894
SapI	GCTCTTC	1 cut(s)	1215
SaqAI	TTAA	1 cut(s)	636
Sau3AI	GATC	5 cut(s)	357, 825, 1086, 1126, 1722
Sau96I	GGNCC	7 cut(s)	43, 308, 445, 527, 664, 795, 906
SchI	GAGTC	4 cut(s)	743, 911, 1338, 1541
ScrFI	CCNGG	5 cut(s)	166, 534, 939, 1400, 1712
SduI	GDGCHC	5 cut(s)	155, 894, 1227, 1246, 1531
SfaNI	GCATC	5 cut(s)	939, 997, 1159, 1261, 1293
SinI	GGWCC	1 cut(s)	527
SmiMI	CAYNNNNRTG	1 cut(s)	963
SmlI	CTYRAG	2 cut(s)	86, 899
SmoI	CTYRAG	2 cut(s)	86, 899
SpeI	ACTAGT	1 cut(s)	1727
SphI	GCATGC	1 cut(s)	418
Sse9I	AATT	1 cut(s)	571
SspMI	CTAG	7 cut(s)	53, 138, 353, 1077, 1307, 1359, 1728
SstI	GAGCTC	1 cut(s)	894
StyD4I	CCNGG	5 cut(s)	164, 532, 937, 1398, 1710
StyI	CCWWGG	1 cut(s)	1029
TaaI	ACNGT	3 cut(s)	703, 1353, 1467
TaiI	ACGT	4 cut(s)	346, 441, 505, 645
TaqI	TCGA	5 cut(s)	189, 338, 492, 657, 768
TasI	AATT	1 cut(s)	571
TatI	WGTACW	1 cut(s)	955
TauI	GCSGC	8 cut(s)	44, 172, 296, 686, 835, 911, 1067, 1283
TfiI	GAWTC	6 cut(s)	103, 116, 145, 275, 281, 603
Tru1I	TTAA	1 cut(s)	636
Tru9I	TTAA	1 cut(s)	636
TscAI	CASTG	4 cut(s)	708, 1246, 1472, 1669
TseFI	GTSAC	2 cut(s)	622, 738
TseI	GCWGC	7 cut(s)	7, 10, 56, 323, 846, 1052, 1055
Tsp45I	GTSAC	2 cut(s)	622, 738
TspDTI	ATGAA	6 cut(s)	150, 778, 973, 1127, 1568, 1622
TspGWI	ACGGA	1 cut(s)	1644
TspRI	CASTG	4 cut(s)	708, 1246, 1472, 1669
Tth111I	GACNNNGTC	2 cut(s)	437, 1550
Van91I	CCANNNNNTGG	3 cut(s)	99, 1290, 1432
VneI	GTGCAC	1 cut(s)	1527
VpaK11BI	GGWCC	1 cut(s)	527
XceI	RCATGY	3 cut(s)	418, 962, 1199
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1291
XmnI	GAANNNNTTC	1 cut(s)	102
XspI	CTAG	7 cut(s)	53, 138, 353, 1077, 1307, 1359, 1728
ZraI	GACGTC	1 cut(s)	439

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.