Rmu_sc0000863.1_g000006

ATPase WRNIP1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000863.1
Physical Location & Seq
Forward (+)
18134 .. 19162
1029 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000863.1_g000006.1.cds

Sequence Viewer

Length: 1029 bp
atggagcagctgttaagcatgggcttccccaccgacctcgccgccgaagctctcgctgccaccggcggcaactccgctctcaaagccaccgattggattctcaaccgcaattcctccaccacctccacctccactcccaccgccacctctcaacccaaactcgatcgcttcttcctctcccaatccaccccctcctcaaattcacaatcccaagacaaacaagaaccagaagaacaacagtccaccccaacctcccaactccccaagcgccgcaaacttctcgtcccggaaaccccgccgcccactacctccgataaacccgcaaccgccgcggcccaccaccagcccttgtcggagcgcatgcggcccaggaccctaaacgacgtcgtcggccaggaccacctcctcgccccaaactccctccttcgctccgctatcaaatgcgagcgtctcccttccctcgtcttctggggcccacccggcaccggcaagacctccatcgccaaagccatcatcaactccgcctcctcctcctccgccgcccggccctaccggttcgtctcgctctccgccgtcaccgccggcgtcaaagacgtcagggaagccatcgacgaggcccggaagaggaagaagctgaacggccagaggaccgtgctgttcgtcgacgaggttcacaggttcaacaaatcgcagcagggctctttcttgccggtgatcgaagacggcagcatagtctttatgggcgccaccactgagaacccttcgttccatttgatcacaccgctcttgtctaggtctcgagttcttgatcttcgacccttgagcccacaatatatagagattcttctccggcgagcggcggaaaactctgaaatcggattggcttggagtgtggggatgcaagtaggtgaagatgaggaaggcattcgttttatctctgccaattgcgacggcactcaatgcattggaaatctcagctacaacagcagctgtcccgtcactcccgggcctcgacgccggattcagtag

Protein Analysis

342

Amino Acids

37.23

Weight (kDa)

9.23

Isoelectric Point (pI)

56.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 387, 597
AccB1I GGYRCC 2 cut(s) 482, 743
AccB7I CCANNNNNTGG 1 cut(s) 93
AccBSI CCGCTC 3 cut(s) 77, 784, 857
AccI GTMKAC 1 cut(s) 663
AccII CGCG 1 cut(s) 332
AcoI YGGCCR 2 cut(s) 391, 640
AcsI RAATTY 1 cut(s) 199
AcyI GRCGYC 5 cut(s) 384, 585, 594, 744, 1015
AfiI CCNNNNNNNGG 5 cut(s) 93, 485, 543, 624, 856
AgeI ACCGGT 1 cut(s) 552
AgsI TTSAA 1 cut(s) 682
AjnI CCWGG 2 cut(s) 368, 393
AluBI AGCT 5 cut(s) 10, 50, 634, 978, 990
AluI AGCT 5 cut(s) 10, 50, 634, 978, 990
Alw26I GTCTC 3 cut(s) 455, 565, 801
AlwNI CAGNNNCTG 1 cut(s) 990
Ama87I CYCGRG 2 cut(s) 798, 1004
AoxI GGCC 8 cut(s) 333, 365, 391, 472, 545, 615, 640, 1007
ApaI GGGCCC 1 cut(s) 476
ApeKI GCWGC 5 cut(s) 7, 56, 691, 726, 987
ApoI RAATTY 1 cut(s) 199
ArsI GACNNNNNNTTYG 2 cut(s) 267, 299
AsiGI ACCGGT 1 cut(s) 552
Asp700I GAANNNNTTC 1 cut(s) 924
AspLEI GCGC 3 cut(s) 270, 360, 746
AsuC2I CCSGG 6 cut(s) 287, 480, 544, 619, 1005, 1006
AsuHPI GGTGA 3 cut(s) 568, 724, 920
AvaI CYCGRG 2 cut(s) 798, 1004
AvaII GGWCC 3 cut(s) 372, 397, 648
BaeGI GKGCMC 1 cut(s) 476
BanI GGYRCC 2 cut(s) 482, 743
BanII GRGCYC 3 cut(s) 476, 701, 827
BbsI GAAGAC 2 cut(s) 457, 726
BbvI GCAGC 5 cut(s) 19, 43, 703, 738, 999
BccI CCATC 3 cut(s) 506, 518, 614
BceAI ACGGC 4 cut(s) 557, 655, 739, 967
BcgI CGANNNNNNTGC 2 cut(s) 262, 296
BciT130I CCWGG 2 cut(s) 370, 395
BclI TGATCA 1 cut(s) 774
BcnI CCSGG 6 cut(s) 287, 480, 544, 619, 1005, 1006
BcoDI GTCTC 3 cut(s) 455, 565, 801
BfaI CTAG 1 cut(s) 792
BfoI RGCGCY 2 cut(s) 271, 747
BglI GCCNNNNNGGC 1 cut(s) 480
Bme1390I CCNGG 8 cut(s) 287, 370, 395, 480, 544, 619, 1005, 1006
Bme18I GGWCC 3 cut(s) 372, 397, 648
BmeT110I CYCGRG 2 cut(s) 798, 1004
BmiI GGNNCC 5 cut(s) 374, 473, 474, 484, 745
BmrFI CCNGG 8 cut(s) 287, 370, 395, 480, 544, 619, 1005, 1006
BmsI GCATC 1 cut(s) 888
BpiI GAAGAC 2 cut(s) 457, 726
BpuEI CTTGAG 1 cut(s) 841
BpuMI CCSGG 6 cut(s) 287, 480, 544, 619, 1005, 1006
BsaHI GRCGYC 5 cut(s) 384, 585, 594, 744, 1015
BsaI GGTCTC 1 cut(s) 801
BsaJI CCNNGG 3 cut(s) 330, 368, 1004
BsaWI WCCGGW 1 cut(s) 552
BsaXI ACNNNNNCTCC 5 cut(s) 26, 118, 148, 509, 539
Bsc4I CCNNNNNNNGG 5 cut(s) 93, 485, 543, 624, 856
Bse118I RCCGGY 5 cut(s) 62, 485, 552, 581, 709
BseBI CCWGG 2 cut(s) 370, 395
BseDI CCNNGG 3 cut(s) 330, 368, 1004
BseGI GGATG 1 cut(s) 903
BseLI CCNNNNNNNGG 5 cut(s) 93, 485, 543, 624, 856
BseMII CTCAG 2 cut(s) 744, 988
BseRI GAGGAG 5 cut(s) 184, 395, 517, 520, 523
BseSI GKGCMC 1 cut(s) 476
BseXI GCAGC 5 cut(s) 19, 43, 703, 738, 999
Bsh1236I CGCG 1 cut(s) 332
Bsh1285I CGRYCG 1 cut(s) 166
BshFI GGCC 8 cut(s) 335, 367, 393, 474, 547, 617, 642, 1009
BshNI GGYRCC 2 cut(s) 482, 743
BshTI ACCGGT 1 cut(s) 552
BsiEI CGRYCG 1 cut(s) 166
BsiHKCI CYCGRG 2 cut(s) 798, 1004
BslFI GGGAC 2 cut(s) 269, 978
BslI CCNNNNNNNGG 5 cut(s) 93, 485, 543, 624, 856
BsmAI GTCTC 3 cut(s) 455, 565, 801
BsmBI CGTCTC 2 cut(s) 455, 565
BsmFI GGGAC 2 cut(s) 269, 978
BsmI GAATGC 1 cut(s) 924
BsnI GGCC 8 cut(s) 335, 367, 393, 474, 547, 617, 642, 1009
Bso31I GGTCTC 1 cut(s) 801
BsoBI CYCGRG 2 cut(s) 798, 1004
Bsp120I GGGCCC 1 cut(s) 472
Bsp1286I GDGCHC 3 cut(s) 476, 701, 827
Bsp143I GATC 4 cut(s) 163, 714, 774, 808
BspANI GGCC 8 cut(s) 335, 367, 393, 474, 547, 617, 642, 1009
BspCNI CTCAG 2 cut(s) 745, 987
BspFNI CGCG 1 cut(s) 332
BspLI GGNNCC 5 cut(s) 374, 473, 474, 484, 745
BspT107I GGYRCC 2 cut(s) 482, 743
BspTNI GGTCTC 1 cut(s) 801
BsrBI CCGCTC 3 cut(s) 77, 784, 857
BsrFI RCCGGY 5 cut(s) 62, 485, 552, 581, 709
BssAI RCCGGY 5 cut(s) 62, 485, 552, 581, 709
BssECI CCNNGG 3 cut(s) 330, 368, 1004
BssMI GATC 4 cut(s) 163, 714, 774, 808
BssNI GRCGYC 5 cut(s) 384, 585, 594, 744, 1015
Bst2UI CCWGG 2 cut(s) 370, 395
Bst4CI ACNGT 2 cut(s) 240, 652
Bst6I CTCTTC 1 cut(s) 617
BstACI GRCGYC 5 cut(s) 384, 585, 594, 744, 1015
BstAPI GCANNNNNTGC 1 cut(s) 960
BstC8I GCNNGC 4 cut(s) 362, 446, 583, 855
BstDEI CTNAG 2 cut(s) 753, 974
BstDSI CCRYGG 1 cut(s) 330
BstF5I GGATG 1 cut(s) 903
BstFNI CGCG 1 cut(s) 332
BstH2I RGCGCY 2 cut(s) 271, 747
BstHHI GCGC 3 cut(s) 270, 360, 746
BstKTI GATC 4 cut(s) 166, 717, 777, 811
BstMAI GTCTC 3 cut(s) 455, 565, 801
BstMBI GATC 4 cut(s) 163, 714, 774, 808
BstMCI CGRYCG 1 cut(s) 166
BstMWI GCNNNNNNNGC 9 cut(s) 47, 56, 83, 329, 364, 480, 578, 960, 984
BstNI CCWGG 2 cut(s) 370, 395
BstNSI RCATGY 1 cut(s) 364
BstSCI CCNGG 8 cut(s) 285, 368, 393, 478, 542, 617, 1003, 1004
BstSLI GKGCMC 1 cut(s) 476
BstUI CGCG 1 cut(s) 332
BstV1I GCAGC 5 cut(s) 19, 43, 703, 738, 999
BstV2I GAAGAC 2 cut(s) 457, 726
BsuRI GGCC 8 cut(s) 335, 367, 393, 474, 547, 617, 642, 1009
BtgI CCRYGG 1 cut(s) 330
BtgZI GCGATG 1 cut(s) 484
BtsCI GGATG 1 cut(s) 903
BtsIMutI CAGTG 1 cut(s) 750
Cac8I GCNNGC 4 cut(s) 362, 446, 583, 855
CaiI CAGNNNCTG 1 cut(s) 990
CfoI GCGC 3 cut(s) 270, 360, 746
Cfr10I RCCGGY 5 cut(s) 62, 485, 552, 581, 709
Cfr42I CCGCGG 1 cut(s) 333
Cfr9I CCCGGG 1 cut(s) 1004
CseI GACGC 3 cut(s) 437, 574, 1023
CspAI ACCGGT 1 cut(s) 552
CviAII CATG 2 cut(s) 19, 361
DdeI CTNAG 2 cut(s) 753, 974
DinI GGCGCC 1 cut(s) 745
DpnI GATC 4 cut(s) 165, 716, 776, 810
DpnII GATC 4 cut(s) 163, 714, 774, 808
EaeI YGGCCR 2 cut(s) 391, 640
Eam1104I CTCTTC 1 cut(s) 617
EarI CTCTTC 1 cut(s) 617
EciI GGCGGA 4 cut(s) 511, 526, 559, 875
Eco24I GRGCYC 3 cut(s) 476, 701, 827
Eco31I GGTCTC 1 cut(s) 801
Eco47I GGWCC 3 cut(s) 372, 397, 648
Eco88I CYCGRG 2 cut(s) 798, 1004
EcoO109I RGGNCCY 2 cut(s) 372, 472
EcoRII CCWGG 2 cut(s) 368, 393
EcoT22I ATGCAT 1 cut(s) 965
EcoT38I GRGCYC 3 cut(s) 476, 701, 827
EgeI GGCGCC 1 cut(s) 745
EheI GGCGCC 1 cut(s) 745
Esp3I CGTCTC 2 cut(s) 455, 565
FaeI CATG 2 cut(s) 22, 364
FaiI YATR 6 cut(s) 20, 362, 731, 740, 834, 836
FaqI GGGAC 2 cut(s) 269, 978
FatI CATG 2 cut(s) 18, 360
FauI CCCGC 2 cut(s) 303, 328
FbaI TGATCA 1 cut(s) 774
FblI GTMKAC 1 cut(s) 663
FokI GGATG 1 cut(s) 910
FriOI GRGCYC 3 cut(s) 476, 701, 827
FspBI CTAG 1 cut(s) 792
GlaI GCGC 3 cut(s) 269, 359, 745
HaeII RGCGCY 2 cut(s) 271, 747
HaeIII GGCC 8 cut(s) 335, 367, 393, 474, 547, 617, 642, 1009
HgaI GACGC 3 cut(s) 437, 574, 1023
HhaI GCGC 3 cut(s) 270, 360, 746
Hin1I GRCGYC 5 cut(s) 384, 585, 594, 744, 1015
Hin1II CATG 2 cut(s) 22, 364
Hin6I GCGC 3 cut(s) 268, 358, 744
HinP1I GCGC 3 cut(s) 268, 358, 744
HincII GTYRAC 1 cut(s) 664
HindII GTYRAC 1 cut(s) 664
HinfI GANTC 3 cut(s) 97, 841, 1021
HphI GGTGA 3 cut(s) 568, 724, 920
Hpy166II GTNNAC 3 cut(s) 243, 664, 673
Hpy188I TCNGA 4 cut(s) 313, 355, 871, 878
Hpy188III TCNNGA 2 cut(s) 798, 806
Hpy8I GTNNAC 3 cut(s) 243, 664, 673
Hpy99I CGWCG 8 cut(s) 386, 389, 392, 614, 665, 668, 953, 1017
HpyAV CCTTC 4 cut(s) 434, 465, 771, 914
HpyCH4III ACNGT 2 cut(s) 240, 652
HpyCH4IV ACGT 2 cut(s) 384, 594
HpyCH4V TGCA 2 cut(s) 901, 963
HpyF10VI GCNNNNNNNGC 9 cut(s) 47, 56, 83, 329, 364, 480, 578, 960, 984
HpyF3I CTNAG 2 cut(s) 753, 974
HpySE526I ACGT 2 cut(s) 384, 594
Hsp92I GRCGYC 5 cut(s) 384, 585, 594, 744, 1015
Hsp92II CATG 2 cut(s) 22, 364
HspAI GCGC 3 cut(s) 268, 358, 744
KasI GGCGCC 1 cut(s) 743
KroI GCCGGC 1 cut(s) 581
KroNI GCCGGC 1 cut(s) 583
Ksp22I TGATCA 1 cut(s) 774
KspI CCGCGG 1 cut(s) 333
Kzo9I GATC 4 cut(s) 163, 714, 774, 808
LmnI GCTCC 3 cut(s) 4, 355, 434
Lsp1109I GCAGC 5 cut(s) 19, 43, 703, 738, 999
LweI GCATC 1 cut(s) 888
MaeI CTAG 1 cut(s) 792
MaeII ACGT 2 cut(s) 384, 594
MaeIII GTNAC 2 cut(s) 574, 997
MalI GATC 4 cut(s) 165, 716, 776, 810
MbiI CCGCTC 3 cut(s) 77, 784, 857
MboI GATC 4 cut(s) 163, 714, 774, 808
MboII GAAGA 9 cut(s) 163, 242, 457, 634, 640, 731, 803, 836, 923
MfeI CAATTG 1 cut(s) 943
MhlI GDGCHC 3 cut(s) 476, 701, 827
MluCI AATT 3 cut(s) 109, 199, 943
Mly113I GGCGCC 1 cut(s) 744
MmeI TCCRAC 1 cut(s) 333
Mph1103I ATGCAT 1 cut(s) 965
MreI CGCCGGCG 1 cut(s) 581
MroNI GCCGGC 1 cut(s) 581
MroXI GAANNNNTTC 1 cut(s) 924
MseI TTAA 1 cut(s) 14
MspA1I CMGCKG 3 cut(s) 10, 332, 990
MspR9I CCNGG 8 cut(s) 287, 370, 395, 480, 544, 619, 1005, 1006
MunI CAATTG 1 cut(s) 943
Mva1269I GAATGC 1 cut(s) 924
MvaI CCWGG 2 cut(s) 370, 395
MvnI CGCG 1 cut(s) 332
MwoI GCNNNNNNNGC 9 cut(s) 47, 56, 83, 329, 364, 480, 578, 960, 984
NaeI GCCGGC 1 cut(s) 583
NarI GGCGCC 1 cut(s) 744
NciI CCSGG 6 cut(s) 287, 480, 544, 619, 1005, 1006
NdeII GATC 4 cut(s) 163, 714, 774, 808
NgoMIV GCCGGC 1 cut(s) 581
NlaIII CATG 2 cut(s) 22, 364
NlaIV GGNNCC 5 cut(s) 374, 473, 474, 484, 745
NmuCI GTSAC 2 cut(s) 574, 997
NsiI ATGCAT 1 cut(s) 965
NspI RCATGY 1 cut(s) 364
PaeI GCATGC 1 cut(s) 364
PaeR7I CTCGAG 1 cut(s) 798
PctI GAATGC 1 cut(s) 924
PdiI GCCGGC 1 cut(s) 583
PdmI GAANNNNTTC 1 cut(s) 924
PfeI GAWTC 3 cut(s) 97, 841, 1021
PflFI GACNNNGTC 1 cut(s) 386
PflMI CCANNNNNTGG 1 cut(s) 93
PfoI TCCNGGA 1 cut(s) 285
PinAI ACCGGT 1 cut(s) 552
Ple19I CGATCG 1 cut(s) 166
PluTI GGCGCC 1 cut(s) 747
PpuMI RGGWCCY 1 cut(s) 372
Psp5II RGGWCCY 1 cut(s) 372
Psp6I CCWGG 2 cut(s) 368, 393
PspGI CCWGG 2 cut(s) 368, 393
PspN4I GGNNCC 5 cut(s) 374, 473, 474, 484, 745
PspOMI GGGCCC 1 cut(s) 472
PspPPI RGGWCCY 1 cut(s) 372
PstNI CAGNNNCTG 1 cut(s) 990
PsyI GACNNNGTC 1 cut(s) 386
PvuI CGATCG 1 cut(s) 166
PvuII CAGCTG 2 cut(s) 10, 990
SacII CCGCGG 1 cut(s) 333
SalI GTCGAC 1 cut(s) 662
SaqAI TTAA 1 cut(s) 14
Sau3AI GATC 4 cut(s) 163, 714, 774, 808
ScrFI CCNGG 8 cut(s) 287, 370, 395, 480, 544, 619, 1005, 1006
SduI GDGCHC 3 cut(s) 476, 701, 827
SfaNI GCATC 1 cut(s) 888
SfoI GGCGCC 1 cut(s) 745
Sfr274I CTCGAG 1 cut(s) 798
Sfr303I CCGCGG 1 cut(s) 333
SgrAI CRCCGGYG 2 cut(s) 62, 581
SgrBI CCGCGG 1 cut(s) 333
SgrDI CGTCGACG 1 cut(s) 662
SinI GGWCC 3 cut(s) 372, 397, 648
SlaI CTCGAG 1 cut(s) 798
SmaI CCCGGG 1 cut(s) 1006
SmlI CTYRAG 2 cut(s) 798, 820
SmoI CTYRAG 2 cut(s) 798, 820
SphI GCATGC 1 cut(s) 364
Sse9I AATT 3 cut(s) 109, 199, 943
SspDI GGCGCC 1 cut(s) 743
SspMI CTAG 1 cut(s) 792
StyD4I CCNGG 8 cut(s) 285, 368, 393, 478, 542, 617, 1003, 1004
TaaI ACNGT 2 cut(s) 240, 652
TaiI ACGT 2 cut(s) 387, 597
TaqI TCGA 7 cut(s) 162, 609, 663, 717, 799, 814, 1012
TasI AATT 3 cut(s) 109, 199, 943
TauI GCSGC 9 cut(s) 44, 69, 273, 301, 332, 335, 367, 542, 860
TfiI GAWTC 3 cut(s) 97, 841, 1021
Tru1I TTAA 1 cut(s) 14
Tru9I TTAA 1 cut(s) 14
TscAI CASTG 1 cut(s) 757
TseFI GTSAC 2 cut(s) 574, 997
TseI GCWGC 5 cut(s) 7, 56, 691, 726, 987
Tsp45I GTSAC 2 cut(s) 574, 997
TspMI CCCGGG 1 cut(s) 1004
TspRI CASTG 1 cut(s) 757
Tth111I GACNNNGTC 1 cut(s) 386
Van91I CCANNNNNTGG 1 cut(s) 93
VpaK11BI GGWCC 3 cut(s) 372, 397, 648
XapI RAATTY 1 cut(s) 199
XceI RCATGY 1 cut(s) 364
XhoI CTCGAG 1 cut(s) 798
XmaI CCCGGG 1 cut(s) 1004
XmiI GTMKAC 1 cut(s) 663
XmnI GAANNNNTTC 1 cut(s) 924
XspI CTAG 1 cut(s) 792
ZraI GACGTC 2 cut(s) 385, 595
Zsp2I ATGCAT 1 cut(s) 965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.