Rmu_sc0010461.1_g000001

ATPase WRNIP1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010461.1
Physical Location & Seq
Reverse (-)
2 .. 1071
1070 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010461.1_g000001.1.cds

Sequence Viewer

Length: 1070 bp
atggagcagctgttaagcatgggcttccccaccgacctcgccgccgaagcactcgctgccaccggcggcaactccgctctcaaagccaccgattggattctcaaccgcaattcctccaccacctccacctccactcccaccgccacctctcaacccaaactcgatcgcttcttcctctcccaatccaccccctcctcaaattcacaatcccaagacaaacaagaaccagaagaacaacagtccaccccaacctcccaactccccaagcgccgcaaacttctcgtcccggaaaccccgccgcccactacctccgataaacccgcaaccgccgcggcccaccaccagcccttgtcggagcgcatgcggcccaggaccctaaacgacgtcgtcggccaagaccacctcctcgccccaaactccctcctccgctccgctatcaaatgcgagcgtctcccttctctcgtcttctggggcccacccggcaccggcaagacctccatcgccaaagccatcatcaactccgcctcctcctccgccgcccggccctaccggttcgtctcgctctccgccgtcaccgccggcgtcaaagacgtcagggaagccatcgacgaggcccggaagaggaagaagctgaacggccagaggaccgttctcttcatcgacgaggttcacaggttcaacaaatcgcagcaggactctttcttgccggtgatcgaagacggcagcatagtcttcatgggcgccaccaccgagaacccttcgttccatttgatcacgccgctcttgtctaggtctcgagttcttgatcttcgacccttgagcccgcaatatatagaggttcttctccggcgagcggcggaaaactccgatatcggattggctcggagcgtggggatgcaagtggatgtggaggaggaagtcattcgttttatctccgccaattgcgacggagatgctagagtggcactcaatgcattggaaatctcagctacaacagcagctgcccgagcctcgacgccggattcagtagctggtgttaccgtggaggatgccaaggaagcactgcaatg

Protein Analysis

356

Amino Acids

38.48

Weight (kDa)

6.99

Isoelectric Point (pI)

53.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 387, 594
AccB1I GGYRCC 2 cut(s) 482, 740
AccB7I CCANNNNNTGG 1 cut(s) 93
AccBSI CCGCTC 4 cut(s) 77, 429, 781, 854
AccII CGCG 1 cut(s) 332
AcoI YGGCCR 2 cut(s) 391, 637
AcsI RAATTY 1 cut(s) 199
AcyI GRCGYC 5 cut(s) 384, 582, 591, 741, 1016
AfiI CCNNNNNNNGG 5 cut(s) 93, 485, 540, 621, 853
AgeI ACCGGT 1 cut(s) 549
AgsI TTSAA 1 cut(s) 679
AjnI CCWGG 1 cut(s) 368
AluBI AGCT 5 cut(s) 10, 631, 989, 1001, 1031
AluI AGCT 5 cut(s) 10, 631, 989, 1001, 1031
Alw26I GTCTC 3 cut(s) 455, 562, 798
AlwNI CAGNNNCTG 2 cut(s) 1001, 1031
Ama87I CYCGRG 2 cut(s) 795, 1005
AoxI GGCC 7 cut(s) 333, 365, 391, 472, 542, 612, 637
ApaI GGGCCC 1 cut(s) 476
ApeKI GCWGC 6 cut(s) 7, 56, 688, 723, 998, 1001
ApoI RAATTY 1 cut(s) 199
ArsI GACNNNNNNTTYG 2 cut(s) 267, 299
AsiGI ACCGGT 1 cut(s) 549
Asp700I GAANNNNTTC 1 cut(s) 921
AspLEI GCGC 3 cut(s) 270, 360, 743
AspS9I GGNCC 8 cut(s) 334, 366, 372, 472, 473, 543, 613, 645
AsuC2I CCSGG 4 cut(s) 287, 480, 541, 616
AsuHPI GGTGA 2 cut(s) 565, 721
AvaI CYCGRG 2 cut(s) 795, 1005
AvaII GGWCC 2 cut(s) 372, 645
BaeGI GKGCMC 1 cut(s) 476
BanI GGYRCC 2 cut(s) 482, 740
BanII GRGCYC 2 cut(s) 476, 824
BbsI GAAGAC 3 cut(s) 457, 723, 724
BbvI GCAGC 6 cut(s) 19, 43, 700, 735, 988, 1010
BccI CCATC 3 cut(s) 506, 518, 611
BceAI ACGGC 3 cut(s) 554, 652, 736
BcgI CGANNNNNNTGC 4 cut(s) 262, 296, 935, 969
BciT130I CCWGG 1 cut(s) 370
BclI TGATCA 1 cut(s) 771
BcnI CCSGG 4 cut(s) 287, 480, 541, 616
BcoDI GTCTC 3 cut(s) 455, 562, 798
BfaI CTAG 2 cut(s) 789, 957
BfoI RGCGCY 2 cut(s) 271, 744
BglI GCCNNNNNGGC 1 cut(s) 480
Bme1390I CCNGG 5 cut(s) 287, 370, 480, 541, 616
Bme18I GGWCC 2 cut(s) 372, 645
BmeT110I CYCGRG 2 cut(s) 795, 1005
BmgT120I GGNCC 8 cut(s) 334, 366, 372, 472, 473, 543, 613, 645
BmiI GGNNCC 5 cut(s) 374, 473, 474, 484, 742
BmrFI CCNGG 5 cut(s) 287, 370, 480, 541, 616
BmsI GCATC 3 cut(s) 885, 943, 1039
BpiI GAAGAC 3 cut(s) 457, 723, 724
BplI GAGNNNNNCTC 2 cut(s) 951, 983
BpuEI CTTGAG 1 cut(s) 838
BpuMI CCSGG 4 cut(s) 287, 480, 541, 616
BsaHI GRCGYC 5 cut(s) 384, 582, 591, 741, 1016
BsaI GGTCTC 1 cut(s) 798
BsaJI CCNNGG 4 cut(s) 330, 368, 1041, 1053
BsaWI WCCGGW 1 cut(s) 549
BsaXI ACNNNNNCTCC 5 cut(s) 26, 118, 148, 509, 539
Bsc4I CCNNNNNNNGG 5 cut(s) 93, 485, 540, 621, 853
Bse118I RCCGGY 5 cut(s) 62, 485, 549, 578, 706
BseBI CCWGG 1 cut(s) 370
BseDI CCNNGG 4 cut(s) 330, 368, 1041, 1053
BseGI GGATG 3 cut(s) 900, 910, 1054
BseLI CCNNNNNNNGG 5 cut(s) 93, 485, 540, 621, 853
BseMII CTCAG 1 cut(s) 999
BseRI GAGGAG 6 cut(s) 184, 395, 413, 517, 520, 926
BseSI GKGCMC 1 cut(s) 476
BseXI GCAGC 6 cut(s) 19, 43, 700, 735, 988, 1010
Bsh1236I CGCG 1 cut(s) 332
Bsh1285I CGRYCG 1 cut(s) 166
BshFI GGCC 7 cut(s) 335, 367, 393, 474, 544, 614, 639
BshNI GGYRCC 2 cut(s) 482, 740
BshTI ACCGGT 1 cut(s) 549
BsiEI CGRYCG 1 cut(s) 166
BsiHKCI CYCGRG 2 cut(s) 795, 1005
BslFI GGGAC 1 cut(s) 269
BslI CCNNNNNNNGG 5 cut(s) 93, 485, 540, 621, 853
BsmAI GTCTC 3 cut(s) 455, 562, 798
BsmBI CGTCTC 2 cut(s) 455, 562
BsmFI GGGAC 1 cut(s) 269
BsnI GGCC 7 cut(s) 335, 367, 393, 474, 544, 614, 639
Bso31I GGTCTC 1 cut(s) 798
BsoBI CYCGRG 2 cut(s) 795, 1005
Bsp120I GGGCCC 1 cut(s) 472
Bsp1286I GDGCHC 2 cut(s) 476, 824
Bsp143I GATC 4 cut(s) 163, 711, 771, 805
BspANI GGCC 7 cut(s) 335, 367, 393, 474, 544, 614, 639
BspCNI CTCAG 1 cut(s) 998
BspFNI CGCG 1 cut(s) 332
BspLI GGNNCC 5 cut(s) 374, 473, 474, 484, 742
BspT107I GGYRCC 2 cut(s) 482, 740
BspTNI GGTCTC 1 cut(s) 798
BsrBI CCGCTC 4 cut(s) 77, 429, 781, 854
BsrFI RCCGGY 5 cut(s) 62, 485, 549, 578, 706
BssAI RCCGGY 5 cut(s) 62, 485, 549, 578, 706
BssECI CCNNGG 4 cut(s) 330, 368, 1041, 1053
BssMI GATC 4 cut(s) 163, 711, 771, 805
BssNI GRCGYC 5 cut(s) 384, 582, 591, 741, 1016
BssT1I CCWWGG 1 cut(s) 1053
Bst2UI CCWGG 1 cut(s) 370
Bst4CI ACNGT 3 cut(s) 240, 649, 1042
Bst6I CTCTTC 2 cut(s) 614, 659
BstACI GRCGYC 5 cut(s) 384, 582, 591, 741, 1016
BstAPI GCANNNNNTGC 2 cut(s) 56, 971
BstC8I GCNNGC 5 cut(s) 362, 446, 580, 824, 852
BstDEI CTNAG 1 cut(s) 985
BstDSI CCRYGG 2 cut(s) 330, 1041
BstF5I GGATG 3 cut(s) 900, 910, 1054
BstFNI CGCG 1 cut(s) 332
BstH2I RGCGCY 2 cut(s) 271, 744
BstHHI GCGC 3 cut(s) 270, 360, 743
BstKTI GATC 4 cut(s) 166, 714, 774, 808
BstMAI GTCTC 3 cut(s) 455, 562, 798
BstMBI GATC 4 cut(s) 163, 711, 771, 805
BstMCI CGRYCG 1 cut(s) 166
BstNI CCWGG 1 cut(s) 370
BstNSI RCATGY 1 cut(s) 364
BstSCI CCNGG 5 cut(s) 285, 368, 478, 539, 614
BstSLI GKGCMC 1 cut(s) 476
BstUI CGCG 1 cut(s) 332
BstV1I GCAGC 6 cut(s) 19, 43, 700, 735, 988, 1010
BstV2I GAAGAC 3 cut(s) 457, 723, 724
BsuRI GGCC 7 cut(s) 335, 367, 393, 474, 544, 614, 639
BtgI CCRYGG 2 cut(s) 330, 1041
BtgZI GCGATG 1 cut(s) 484
BtsCI GGATG 3 cut(s) 900, 910, 1054
BtsI GCAGTG 1 cut(s) 1061
BtsIMutI CAGTG 1 cut(s) 1061
Cac8I GCNNGC 5 cut(s) 362, 446, 580, 824, 852
CaiI CAGNNNCTG 2 cut(s) 1001, 1031
CfoI GCGC 3 cut(s) 270, 360, 743
Cfr10I RCCGGY 5 cut(s) 62, 485, 549, 578, 706
Cfr13I GGNCC 8 cut(s) 334, 366, 372, 472, 473, 543, 613, 645
Cfr42I CCGCGG 1 cut(s) 333
CseI GACGC 3 cut(s) 437, 571, 1024
CspAI ACCGGT 1 cut(s) 549
CviAII CATG 3 cut(s) 19, 361, 736
DdeI CTNAG 1 cut(s) 985
DinI GGCGCC 1 cut(s) 742
DpnI GATC 4 cut(s) 165, 713, 773, 807
DpnII GATC 4 cut(s) 163, 711, 771, 805
EaeI YGGCCR 2 cut(s) 391, 637
Eam1104I CTCTTC 2 cut(s) 614, 659
EarI CTCTTC 2 cut(s) 614, 659
EciI GGCGGA 5 cut(s) 511, 523, 556, 872, 925
Eco130I CCWWGG 1 cut(s) 1053
Eco24I GRGCYC 2 cut(s) 476, 824
Eco31I GGTCTC 1 cut(s) 798
Eco32I GATATC 1 cut(s) 871
Eco47I GGWCC 2 cut(s) 372, 645
Eco88I CYCGRG 2 cut(s) 795, 1005
EcoO109I RGGNCCY 2 cut(s) 372, 472
EcoRII CCWGG 1 cut(s) 368
EcoRV GATATC 1 cut(s) 871
EcoT14I CCWWGG 1 cut(s) 1053
EcoT22I ATGCAT 1 cut(s) 976
EcoT38I GRGCYC 2 cut(s) 476, 824
EgeI GGCGCC 1 cut(s) 742
EheI GGCGCC 1 cut(s) 742
ErhI CCWWGG 1 cut(s) 1053
Esp3I CGTCTC 2 cut(s) 455, 562
FaeI CATG 3 cut(s) 22, 364, 739
FaiI YATR 6 cut(s) 20, 362, 728, 737, 831, 833
FaqI GGGAC 1 cut(s) 269
FatI CATG 3 cut(s) 18, 360, 735
FauI CCCGC 3 cut(s) 303, 328, 831
FbaI TGATCA 1 cut(s) 771
FokI GGATG 3 cut(s) 907, 917, 1061
FriOI GRGCYC 2 cut(s) 476, 824
FspBI CTAG 2 cut(s) 789, 957
GlaI GCGC 3 cut(s) 269, 359, 742
HaeII RGCGCY 2 cut(s) 271, 744
HaeIII GGCC 7 cut(s) 335, 367, 393, 474, 544, 614, 639
HgaI GACGC 3 cut(s) 437, 571, 1024
HhaI GCGC 3 cut(s) 270, 360, 743
Hin1I GRCGYC 5 cut(s) 384, 582, 591, 741, 1016
Hin1II CATG 3 cut(s) 22, 364, 739
Hin6I GCGC 3 cut(s) 268, 358, 741
HinP1I GCGC 3 cut(s) 268, 358, 741
HinfI GANTC 3 cut(s) 97, 695, 1022
HphI GGTGA 2 cut(s) 565, 721
Hpy166II GTNNAC 2 cut(s) 243, 670
Hpy188I TCNGA 5 cut(s) 313, 355, 868, 875, 885
Hpy188III TCNNGA 2 cut(s) 795, 803
Hpy8I GTNNAC 2 cut(s) 243, 670
Hpy99I CGWCG 7 cut(s) 386, 389, 392, 611, 665, 950, 1018
HpyAV CCTTC 2 cut(s) 465, 768
HpyCH4III ACNGT 3 cut(s) 240, 649, 1042
HpyCH4IV ACGT 2 cut(s) 384, 591
HpyCH4V TGCA 3 cut(s) 898, 974, 1066
HpyF3I CTNAG 1 cut(s) 985
HpySE526I ACGT 2 cut(s) 384, 591
Hsp92I GRCGYC 5 cut(s) 384, 582, 591, 741, 1016
Hsp92II CATG 3 cut(s) 22, 364, 739
HspAI GCGC 3 cut(s) 268, 358, 741
KasI GGCGCC 1 cut(s) 740
KroI GCCGGC 1 cut(s) 578
KroNI GCCGGC 1 cut(s) 580
Ksp22I TGATCA 1 cut(s) 771
KspI CCGCGG 1 cut(s) 333
Kzo9I GATC 4 cut(s) 163, 711, 771, 805
LmnI GCTCC 4 cut(s) 4, 355, 434, 885
Lsp1109I GCAGC 6 cut(s) 19, 43, 700, 735, 988, 1010
LweI GCATC 3 cut(s) 885, 943, 1039
MaeI CTAG 2 cut(s) 789, 957
MaeII ACGT 2 cut(s) 384, 591
MaeIII GTNAC 2 cut(s) 571, 1036
MalI GATC 4 cut(s) 165, 713, 773, 807
MbiI CCGCTC 4 cut(s) 77, 429, 781, 854
MboI GATC 4 cut(s) 163, 711, 771, 805
MfeI CAATTG 1 cut(s) 940
MhlI GDGCHC 2 cut(s) 476, 824
MluCI AATT 3 cut(s) 109, 199, 940
Mly113I GGCGCC 1 cut(s) 741
MlyI GAGTC 1 cut(s) 689
MmeI TCCRAC 1 cut(s) 333
Mph1103I ATGCAT 1 cut(s) 976
MreI CGCCGGCG 1 cut(s) 578
MroNI GCCGGC 1 cut(s) 578
MroXI GAANNNNTTC 1 cut(s) 921
MseI TTAA 1 cut(s) 14
MslI CAYNNNNRTG 1 cut(s) 1066
MspA1I CMGCKG 3 cut(s) 10, 332, 1001
MspR9I CCNGG 5 cut(s) 287, 370, 480, 541, 616
MunI CAATTG 1 cut(s) 940
MvaI CCWGG 1 cut(s) 370
MvnI CGCG 1 cut(s) 332
NaeI GCCGGC 1 cut(s) 580
NarI GGCGCC 1 cut(s) 741
NciI CCSGG 4 cut(s) 287, 480, 541, 616
NdeII GATC 4 cut(s) 163, 711, 771, 805
NgoMIV GCCGGC 1 cut(s) 578
NlaIII CATG 3 cut(s) 22, 364, 739
NlaIV GGNNCC 5 cut(s) 374, 473, 474, 484, 742
NmuCI GTSAC 1 cut(s) 571
NsiI ATGCAT 1 cut(s) 976
NspI RCATGY 1 cut(s) 364
PaeI GCATGC 1 cut(s) 364
PaeR7I CTCGAG 1 cut(s) 795
PdiI GCCGGC 1 cut(s) 580
PdmI GAANNNNTTC 1 cut(s) 921
PfeI GAWTC 2 cut(s) 97, 1022
PflFI GACNNNGTC 1 cut(s) 386
PflMI CCANNNNNTGG 1 cut(s) 93
PfoI TCCNGGA 1 cut(s) 285
PinAI ACCGGT 1 cut(s) 549
Ple19I CGATCG 1 cut(s) 166
PleI GAGTC 1 cut(s) 689
PluTI GGCGCC 1 cut(s) 744
PpsI GAGTC 1 cut(s) 689
PpuMI RGGWCCY 1 cut(s) 372
Psp5II RGGWCCY 1 cut(s) 372
Psp6I CCWGG 1 cut(s) 368
PspGI CCWGG 1 cut(s) 368
PspN4I GGNNCC 5 cut(s) 374, 473, 474, 484, 742
PspOMI GGGCCC 1 cut(s) 472
PspPI GGNCC 8 cut(s) 334, 366, 372, 472, 473, 543, 613, 645
PspPPI RGGWCCY 1 cut(s) 372
PstNI CAGNNNCTG 2 cut(s) 1001, 1031
PsyI GACNNNGTC 1 cut(s) 386
PvuI CGATCG 1 cut(s) 166
PvuII CAGCTG 2 cut(s) 10, 1001
RseI CAYNNNNRTG 1 cut(s) 1066
SacII CCGCGG 1 cut(s) 333
SaqAI TTAA 1 cut(s) 14
Sau3AI GATC 4 cut(s) 163, 711, 771, 805
Sau96I GGNCC 8 cut(s) 334, 366, 372, 472, 473, 543, 613, 645
SchI GAGTC 1 cut(s) 689
ScrFI CCNGG 5 cut(s) 287, 370, 480, 541, 616
SduI GDGCHC 2 cut(s) 476, 824
SfaNI GCATC 3 cut(s) 885, 943, 1039
SfoI GGCGCC 1 cut(s) 742
Sfr274I CTCGAG 1 cut(s) 795
Sfr303I CCGCGG 1 cut(s) 333
SgrAI CRCCGGYG 2 cut(s) 62, 578
SgrBI CCGCGG 1 cut(s) 333
SinI GGWCC 2 cut(s) 372, 645
SlaI CTCGAG 1 cut(s) 795
SmiMI CAYNNNNRTG 1 cut(s) 1066
SmlI CTYRAG 2 cut(s) 795, 817
SmoI CTYRAG 2 cut(s) 795, 817
SphI GCATGC 1 cut(s) 364
Sse9I AATT 3 cut(s) 109, 199, 940
SspDI GGCGCC 1 cut(s) 740
SspMI CTAG 2 cut(s) 789, 957
StyD4I CCNGG 5 cut(s) 285, 368, 478, 539, 614
StyI CCWWGG 1 cut(s) 1053
TaaI ACNGT 3 cut(s) 240, 649, 1042
TaiI ACGT 2 cut(s) 387, 594
TaqI TCGA 7 cut(s) 162, 606, 660, 714, 796, 811, 1013
TasI AATT 3 cut(s) 109, 199, 940
TfiI GAWTC 2 cut(s) 97, 1022
Tru1I TTAA 1 cut(s) 14
Tru9I TTAA 1 cut(s) 14
TscAI CASTG 1 cut(s) 1068
TseFI GTSAC 1 cut(s) 571
TseI GCWGC 6 cut(s) 7, 56, 688, 723, 998, 1001
Tsp45I GTSAC 1 cut(s) 571
TspDTI ATGAA 2 cut(s) 646, 724
TspGWI ACGGA 1 cut(s) 963
TspRI CASTG 1 cut(s) 1068
Tth111I GACNNNGTC 1 cut(s) 386
Van91I CCANNNNNTGG 1 cut(s) 93
VpaK11BI GGWCC 2 cut(s) 372, 645
XapI RAATTY 1 cut(s) 199
XceI RCATGY 1 cut(s) 364
XhoI CTCGAG 1 cut(s) 795
XmnI GAANNNNTTC 1 cut(s) 921
XspI CTAG 2 cut(s) 789, 957
ZraI GACGTC 2 cut(s) 385, 592
Zsp2I ATGCAT 1 cut(s) 976
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.