Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0005066

Physical Location & Seq

Genomic Coordinates Forward (+)

2953888 .. 2959350

Gene Structure 5463 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1025400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGTCGGATAAGTGGATTTGCGAAAATTGTGGCACTGTGGGGCTGGTTGAAGGCAATGATGGCTACTTCTACTGCACCAACTGCAGCACACGAGCCGAGGACTACCAGGACACCGGAGTCGCAGATGAGGATTTTTACGATAAAGATGGTGATGCACGTGGAGGCCTCTACTCTAATCGTCATGTCCGCCGCGGCGTTAGCTCTGCCGTCAAACCTGAGCCTCTTTCCCAACCCTTAGACAACATCTCGCCTTTTTATAACGCTTTTAGTCAAACCAAAACAGAGGATCACAATGCTGTGGATGCCAAGGGACCCACGGGTCCCACAGATTTCGGACTGGATGGAATCATAGAGTTGAGTGTGGAGGACTATTATACACAGATTAGACTTAGGTATGTGATGGGACTGCAGCGGCTGATTGAGCTCCAATGCGAGGCTTTGGTTAGGAAGTTTAAGGTAAACCCTATGATTTGTGGGTTGTCTGCGACCATTTGGCTACGCTTCCTGGCAGGGACTCGGGTTTTCGATGATGATTGGGCTGACTCTGAGATGTGCCGAGGCCGACAAGGAGACACGTTAGAAGGTTATAAGCCGCGTGCTAATTACAGAGCAGAACCGCACACAAAGTATGGTCAGCGAGCAGTAATGGTATGGTTTAGGTCGTTGAGAAACACTATACCATTATCTTATACTCTAGCTGTTTCCTTTCTGGCTTGTCATCTTTCCAGGGAAGCAGTCCTACCAACAGATATAGTAAAATGGTCATTAGAAGGAAACCTTCCATATTTTTCTGCATTTCTTCAAATTGAAAAAGAATTAGGAGGGCCTTCACGCGCATGTCCAATAAGTTCAAGCTTAATGTTTAGGCCTACTGAATCTGTGCCAGTGCAGAAGTTGGAATCACTGGCAGCAACCATTTCTGAGTCCATAGGCTTGCACTTACCTCCAGTCAATTTTTATGCTATAGCTTTACGCTATCTAGGTAAGTTATCTCTTCCAGTTGAAAAGATCCTCCCTCATGCGTGCCGCATTTATGAGTGGTCAATGCCTCCAGATTTGTGGTTATCAACAAATGAGTTTAGGCTTCCTACTCGTGCTTTTGTAATGTCAATAGTGATTGTAGCAGTGAGAATTCTGTACAATATTCATGGTTTTGGAGAATGGGAAAAATGTTTGTCCCGTAAACATGCTTTGTCTTCCACATCAAACCAAAAAGGAGATCTTGATACCATATCCAGCTCCAAAATGAGGTCTGGCTCAGAAGAGGATTCAGGTTCTCCGTCCCGCAGTCTGGATGATTTGGGTACAGATATTGGTAGAAACTCGTCAAATGCTCAGAGCTCTGAATTGGATGCTGCAGAACTTCTGTCCAGCCTTGAAGCAAGATATAATGAAATTGCCGATTCTTATGAATATTGCAAGGACTTGCCAACGTATCTGCAGTTCTGCAAGGATGTAGTCTTTGCTGGATCAAAATCATTGTTGAATGATGAAAAGGAAGAAGAGCTAATTGAATCATTATGGGAATTTTATCAGAGTGGAAAGGATTCCGAAACAGCAGCCGGAAAAGGATTGTTTGGTGATAGAGATGTTGAACAGAAAATGTTGAGGGACAGTGACGAATGTGCAAGTGATGGCACTCCCTTCGCAGGCGACCATCAAAGGAACAAAACTGGCGATCATTCCTGTGCCAGTTCACAAAATAGTCATGGCTCAGGAGCTAATGACGCGGAAACTCTCAAAGATGAAGCCATTCGTCGAATGAAATTAGACATGGAGGAGAAGAGGTTTTGCTATATTCCCCCGAGGGTGAACCTCAAAAGATTTGATTACCTTCACTATGTGCGGAAGAAGGATGAAGGTGCGTATACTTACGTTGCACATGCAGATTATTACATCTTGCTTCGTTCTTGCGCTAGAGTTGCCCAGGTTGAAATTCGGTGTATGCACATCGCGGTGTTGAGCATCGAGAGGAGGCTGGCATGGTTGGAAAAGAGAATCAATCACTGCTTGCATTTGACCCCTCCCGTTGTATCATGCCAGTATTGCACTGAAATGTTTCCAGATGCGGAAAATAATATTGGGGAGTCGATTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000120 GO:0000976 GO:0001013 GO:0001046 GO:0001047 GO:0001067 GO:0001163 GO:0001164 GO:0001188 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0005668 GO:0005730 GO:0006139 GO:0006351 GO:0006352 GO:0006360 GO:0006361 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016043 GO:0016070 GO:0018130 GO:0019438 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044798 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0065003 GO:0065004 GO:0070013 GO:0070860 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1990837

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RRN7

Protein Analysis

700

Amino Acids

78.78

Weight (kDa)

5.32

Isoelectric Point (pI)

56.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005066)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42615 AT2G02955
fragaria_vesca	FvH4_3g26291
malus_domestica	MD04G1025400.v1.1
prunus_persica	Prupe.1G174900_v2.0.a1 Prupe.1G174900_v2.0.a1
pyrus_communis	pycom04g02160
rosa_chinensis	RchiOBHm_Chr5g0048631 RchiOBHm_Chr5g0048641 RchiOBHm_Chr7g0220011 RchiOBHm_Chr7g0220021
rosa_laevigata	RLG00000002264 RLG00000034545
rosa_multiflora	Rmu_sc0005838.1_g000011 Rmu_sc0011175.1_g000001 Rmu_sc0017790.1_g000001
rosa_roxburghii	Rroxscaffold_1G00033160 Rroxscaffold_3G00239820
rosa_rugosa	Rorug05G0240600 Rorug07G0188400
rosa_samantha	Rh5AG319800 Rh5BG330000 Rh5CG356000 Rh5DG341200 Rh7AG332200 Rh7CG349700 Rh7DG327900
rosa_wichuraiana	Rw5G029910 Rw5G030190 Rw7G027980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	258, 588
AasI	GACNNNNNNGTC	2 cut(s)	116, 318
AccI	GTMKAC	1 cut(s)	1868
AccII	CGCG	5 cut(s)	192, 595, 834, 1730, 1955
AclWI	GGATC	3 cut(s)	294, 1003, 1477
AcsI	RAATTY	3 cut(s)	1131, 1526, 1935
AcvI	CACGTG	1 cut(s)	158
AdeI	CACNNNGTG	1 cut(s)	1843
AfaI	GTAC	2 cut(s)	1139, 1306
AfiI	CCNNNNNNNGG	4 cut(s)	433, 1248, 1291, 1649
AflIII	ACRYGT	1 cut(s)	573
AjnI	CCWGG	4 cut(s)	105, 504, 725, 1926
AjuI	GAANNNNNNNTTGG	2 cut(s)	2064, 2096
AluBI	AGCT	9 cut(s)	201, 424, 698, 855, 968, 1239, 1341, 1507, 1721
AluI	AGCT	9 cut(s)	201, 424, 698, 855, 968, 1239, 1341, 1507, 1721
Alw21I	GWGCWC	2 cut(s)	426, 1343
Alw26I	GTCTC	1 cut(s)	564
AlwI	GGATC	3 cut(s)	294, 1003, 1477
AlwNI	CAGNNNCTG	1 cut(s)	415
Ama87I	CYCGRG	2 cut(s)	516, 1804
AoxI	GGCC	4 cut(s)	163, 559, 824, 866
ApeKI	GCWGC	5 cut(s)	84, 409, 908, 1355, 1559
ApoI	RAATTY	3 cut(s)	1131, 1526, 1935
Asp700I	GAANNNNTTC	3 cut(s)	1546, 1752, 2058
AspLEI	GCGC	2 cut(s)	836, 1916
AspS9I	GGNCC	3 cut(s)	311, 320, 824
AsuHPI	GGTGA	3 cut(s)	161, 1592, 1822
AvaI	CYCGRG	2 cut(s)	516, 1804
AvaII	GGWCC	2 cut(s)	311, 320
BanII	GRGCYC	2 cut(s)	426, 1343
BarI	GAAGNNNNNNTAC	2 cut(s)	723, 755
BauI	CACGAG	2 cut(s)	90, 1092
BbrPI	CACGTG	1 cut(s)	158
BbsI	GAAGAC	1 cut(s)	1188
Bbv12I	GWGCWC	2 cut(s)	426, 1343
BbvI	GCAGC	5 cut(s)	96, 421, 920, 1342, 1571
BccI	CCATC	6 cut(s)	53, 140, 335, 394, 1628, 1665
BceAI	ACGGC	1 cut(s)	191
BcgI	CGANNNNNNTGC	2 cut(s)	1627, 1661
BciT130I	CCWGG	4 cut(s)	107, 506, 727, 1928
BcoDI	GTCTC	1 cut(s)	564
BfaI	CTAG	3 cut(s)	695, 980, 1917
BfmI	CTRYAG	5 cut(s)	82, 407, 963, 1356, 1439
BglII	AGATCT	1 cut(s)	1219
Bme1390I	CCNGG	4 cut(s)	107, 506, 727, 1928
Bme18I	GGWCC	2 cut(s)	311, 320
BmeT110I	CYCGRG	2 cut(s)	516, 1804
BmgT120I	GGNCC	3 cut(s)	311, 320, 824
BmiI	GGNNCC	4 cut(s)	312, 313, 321, 322
BmrFI	CCNGG	4 cut(s)	107, 506, 727, 1928
BmsI	GCATC	5 cut(s)	142, 292, 1342, 1974, 2056
BpiI	GAAGAC	1 cut(s)	1188
BpmI	CTGGAG	2 cut(s)	930, 1035
Bpu10I	CCTNAGC	2 cut(s)	216, 1714
BsaAI	YACGTR	1 cut(s)	158
BsaBI	GATNNNNATC	1 cut(s)	1474
BsaJI	CCNNGG	8 cut(s)	96, 190, 306, 315, 556, 726, 1805, 1926
BsaWI	WCCGGW	1 cut(s)	113
BsaXI	ACNNNNNCTCC	2 cut(s)	1772, 1802
Bsc4I	CCNNNNNNNGG	4 cut(s)	433, 1248, 1291, 1649
Bse1I	ACTGG	8 cut(s)	342, 884, 909, 947, 998, 1678, 1692, 2041
Bse3DI	GCAATG	1 cut(s)	61
Bse8I	GATNNNNATC	1 cut(s)	1474
BseBI	CCWGG	4 cut(s)	107, 506, 727, 1928
BseDI	CCNNGG	8 cut(s)	96, 190, 306, 315, 556, 726, 1805, 1926
BseGI	GGATG	6 cut(s)	307, 346, 1300, 1357, 1459, 1861
BseJI	GATNNNNATC	1 cut(s)	1474
BseLI	CCNNNNNNNGG	4 cut(s)	433, 1248, 1291, 1649
BseMI	GCAATG	1 cut(s)	61
BseMII	CTCAG	6 cut(s)	207, 537, 912, 1272, 1349, 1728
BseNI	ACTGG	8 cut(s)	342, 884, 909, 947, 998, 1678, 1692, 2041
BseRI	GAGGAG	2 cut(s)	1793, 1987
BseXI	GCAGC	5 cut(s)	96, 421, 920, 1342, 1571
BsgI	GTGCAG	2 cut(s)	58, 908
Bsh1236I	CGCG	5 cut(s)	192, 595, 834, 1730, 1955
BshFI	GGCC	4 cut(s)	165, 561, 826, 868
BsiHKAI	GWGCWC	2 cut(s)	426, 1343
BsiHKCI	CYCGRG	2 cut(s)	516, 1804
BsiSI	CCGG	2 cut(s)	114, 1563
BslFI	GGGAC	7 cut(s)	306, 324, 417, 526, 1162, 1267, 1625
BslI	CCNNNNNNNGG	4 cut(s)	433, 1248, 1291, 1649
BsmAI	GTCTC	1 cut(s)	564
BsmFI	GGGAC	7 cut(s)	306, 324, 417, 526, 1162, 1267, 1625
BsnI	GGCC	4 cut(s)	165, 561, 826, 868
BsoBI	CYCGRG	2 cut(s)	516, 1804
Bsp1286I	GDGCHC	2 cut(s)	426, 1343
Bsp1407I	TGTACA	1 cut(s)	1137
Bsp143I	GATC	5 cut(s)	286, 1008, 1219, 1469, 1678
BspANI	GGCC	4 cut(s)	165, 561, 826, 868
BspCNI	CTCAG	6 cut(s)	208, 538, 913, 1271, 1348, 1727
BspFNI	CGCG	5 cut(s)	192, 595, 834, 1730, 1955
BspLI	GGNNCC	4 cut(s)	312, 313, 321, 322
BspMAI	CTGCAG	4 cut(s)	86, 411, 1360, 1443
BspPI	GGATC	3 cut(s)	294, 1003, 1477
BspQI	GCTCTTC	1 cut(s)	1497
BsrDI	GCAATG	1 cut(s)	61
BsrGI	TGTACA	1 cut(s)	1137
BsrI	ACTGG	8 cut(s)	342, 884, 909, 947, 998, 1678, 1692, 2041
BssECI	CCNNGG	8 cut(s)	96, 190, 306, 315, 556, 726, 1805, 1926
BssMI	GATC	5 cut(s)	286, 1008, 1219, 1469, 1678
BssNAI	GTATAC	1 cut(s)	1869
BssSI	CACGAG	2 cut(s)	90, 1092
BssT1I	CCWWGG	1 cut(s)	306
Bst1107I	GTATAC	1 cut(s)	1869
Bst2BI	CACGAG	2 cut(s)	90, 1092
Bst2UI	CCWGG	4 cut(s)	107, 506, 727, 1928
Bst4CI	ACNGT	2 cut(s)	37, 1616
Bst6I	CTCTTC	4 cut(s)	999, 1257, 1497, 1778
BstAPI	GCANNNNNTGC	1 cut(s)	81
BstAUI	TGTACA	1 cut(s)	1137
BstBAI	YACGTR	1 cut(s)	158
BstC8I	GCNNGC	7 cut(s)	597, 639, 935, 1024, 1651, 1980, 2012
BstDEI	CTNAG	8 cut(s)	216, 235, 389, 546, 921, 1258, 1335, 1714
BstDSI	CCRYGG	2 cut(s)	190, 315
BstF5I	GGATG	6 cut(s)	307, 346, 1300, 1357, 1459, 1861
BstFNI	CGCG	5 cut(s)	192, 595, 834, 1730, 1955
BstHHI	GCGC	2 cut(s)	836, 1916
BstKTI	GATC	5 cut(s)	289, 1011, 1222, 1472, 1681
BstMAI	GTCTC	1 cut(s)	564
BstMBI	GATC	5 cut(s)	286, 1008, 1219, 1469, 1678
BstMWI	GCNNNNNNNGC	8 cut(s)	60, 81, 198, 302, 421, 1727, 1922, 2046
BstNI	CCWGG	4 cut(s)	107, 506, 727, 1928
BstNSI	RCATGY	3 cut(s)	840, 1190, 1886
BstSCI	CCNGG	4 cut(s)	105, 504, 725, 1926
BstSFI	CTRYAG	5 cut(s)	82, 407, 963, 1356, 1439
BstUI	CGCG	5 cut(s)	192, 595, 834, 1730, 1955
BstV1I	GCAGC	5 cut(s)	96, 421, 920, 1342, 1571
BstV2I	GAAGAC	1 cut(s)	1188
BstX2I	RGATCY	2 cut(s)	1008, 1219
BstXI	CCANNNNNNTGG	1 cut(s)	1059
BstYI	RGATCY	2 cut(s)	1008, 1219
BstZ17I	GTATAC	1 cut(s)	1869
BsuRI	GGCC	4 cut(s)	165, 561, 826, 868
BtgI	CCRYGG	2 cut(s)	190, 315
BtgZI	GCGATG	1 cut(s)	1936
BtsCI	GGATG	6 cut(s)	307, 346, 1300, 1357, 1459, 1861
BtsI	GCAGTG	2 cut(s)	1131, 2005
BtsIMutI	CAGTG	7 cut(s)	33, 891, 902, 1131, 1621, 2005, 2049
Cac8I	GCNNGC	7 cut(s)	597, 639, 935, 1024, 1651, 1980, 2012
CaiI	CAGNNNCTG	1 cut(s)	415
CfoI	GCGC	2 cut(s)	836, 1916
Cfr13I	GGNCC	3 cut(s)	311, 320, 824
Cfr42I	CCGCGG	1 cut(s)	193
CseI	GACGC	1 cut(s)	1736
Csp6I	GTAC	2 cut(s)	1138, 1305
CviQI	GTAC	2 cut(s)	1138, 1305
DdeI	CTNAG	8 cut(s)	216, 235, 389, 546, 921, 1258, 1335, 1714
DpnI	GATC	5 cut(s)	288, 1010, 1221, 1471, 1680
DpnII	GATC	5 cut(s)	286, 1008, 1219, 1469, 1678
DraIII	CACNNNGTG	1 cut(s)	1843
DrdI	GACNNNNNNGTC	2 cut(s)	116, 318
DseDI	GACNNNNNNGTC	2 cut(s)	116, 318
Eam1104I	CTCTTC	4 cut(s)	999, 1257, 1497, 1778
EarI	CTCTTC	4 cut(s)	999, 1257, 1497, 1778
EciI	GGCGGA	1 cut(s)	176
Ecl136II	GAGCTC	2 cut(s)	424, 1341
Eco130I	CCWWGG	1 cut(s)	306
Eco147I	AGGCCT	2 cut(s)	165, 868
Eco24I	GRGCYC	2 cut(s)	426, 1343
Eco47I	GGWCC	2 cut(s)	311, 320
Eco53kI	GAGCTC	2 cut(s)	424, 1341
Eco72I	CACGTG	1 cut(s)	158
Eco88I	CYCGRG	2 cut(s)	516, 1804
EcoICRI	GAGCTC	2 cut(s)	424, 1341
EcoO109I	RGGNCCY	3 cut(s)	311, 320, 824
EcoRI	GAATTC	1 cut(s)	1131
EcoRII	CCWGG	4 cut(s)	105, 504, 725, 1926
EcoT14I	CCWWGG	1 cut(s)	306
EcoT38I	GRGCYC	2 cut(s)	426, 1343
ErhI	CCWWGG	1 cut(s)	306
FalI	AAGNNNNNCTT	4 cut(s)	762, 794, 1206, 1238
FaqI	GGGAC	7 cut(s)	306, 324, 417, 526, 1162, 1267, 1625
FauI	CCCGC	1 cut(s)	1292
FblI	GTMKAC	1 cut(s)	1868
FokI	GGATG	6 cut(s)	314, 353, 1307, 1364, 1466, 1868
FriOI	GRGCYC	2 cut(s)	426, 1343
FspBI	CTAG	3 cut(s)	695, 980, 1917
GlaI	GCGC	2 cut(s)	835, 1915
GsuI	CTGGAG	2 cut(s)	930, 1035
HaeIII	GGCC	4 cut(s)	165, 561, 826, 868
HapII	CCGG	2 cut(s)	114, 1563
HgaI	GACGC	1 cut(s)	1736
HhaI	GCGC	2 cut(s)	836, 1916
Hin6I	GCGC	2 cut(s)	834, 1914
HinP1I	GCGC	2 cut(s)	834, 1914
HindIII	AAGCTT	1 cut(s)	853
HpaII	CCGG	2 cut(s)	114, 1563
HphI	GGTGA	3 cut(s)	161, 1592, 1822
Hpy166II	GTNNAC	5 cut(s)	460, 1184, 1697, 1813, 1869
Hpy188I	TCNGA	9 cut(s)	7, 335, 547, 922, 1261, 1338, 1345, 1536, 1552
Hpy188III	TCNNGA	6 cut(s)	1052, 1223, 1292, 1716, 1969, 2063
Hpy8I	GTNNAC	5 cut(s)	460, 1184, 1697, 1813, 1869
Hpy99I	CGWCG	1 cut(s)	1761
HpyAV	CCTTC	9 cut(s)	44, 575, 764, 788, 837, 1654, 1844, 1846, 1853
HpyCH4III	ACNGT	2 cut(s)	37, 1616
HpyCH4IV	ACGT	4 cut(s)	157, 575, 1433, 1875
HpyF10VI	GCNNNNNNNGC	8 cut(s)	60, 81, 198, 302, 421, 1727, 1922, 2046
HpyF3I	CTNAG	8 cut(s)	216, 235, 389, 546, 921, 1258, 1335, 1714
HpySE526I	ACGT	4 cut(s)	157, 575, 1433, 1875
HspAI	GCGC	2 cut(s)	834, 1914
KflI	GGGWCCC	2 cut(s)	311, 320
KspI	CCGCGG	1 cut(s)	193
Kzo9I	GATC	5 cut(s)	286, 1008, 1219, 1469, 1678
LguI	GCTCTTC	1 cut(s)	1497
LmnI	GCTCC	3 cut(s)	429, 1244, 1718
Lsp1109I	GCAGC	5 cut(s)	96, 421, 920, 1342, 1571
LweI	GCATC	5 cut(s)	142, 292, 1342, 1974, 2056
MaeI	CTAG	3 cut(s)	695, 980, 1917
MaeII	ACGT	4 cut(s)	157, 575, 1433, 1875
MaeIII	GTNAC	1 cut(s)	1616
MalI	GATC	5 cut(s)	288, 1010, 1221, 1471, 1680
MboI	GATC	5 cut(s)	286, 1008, 1219, 1469, 1678
MboII	GAAGA	8 cut(s)	791, 986, 1188, 1274, 1511, 1514, 1795, 1861
MflI	RGATCY	2 cut(s)	1008, 1219
MhlI	GDGCHC	2 cut(s)	426, 1343
MlyI	GAGTC	5 cut(s)	126, 508, 536, 932, 2096
MmeI	TCCRAC	2 cut(s)	876, 1968
MroXI	GAANNNNTTC	3 cut(s)	1546, 1752, 2058
MseI	TTAA	3 cut(s)	453, 857, 2098
MslI	CAYNNNNRTG	4 cut(s)	835, 1686, 1955, 2054
MspA1I	CMGCKG	2 cut(s)	192, 412
MspI	CCGG	2 cut(s)	114, 1563
MspR9I	CCNGG	4 cut(s)	107, 506, 727, 1928
MvaI	CCWGG	4 cut(s)	107, 506, 727, 1928
MvnI	CGCG	5 cut(s)	192, 595, 834, 1730, 1955
MwoI	GCNNNNNNNGC	8 cut(s)	60, 81, 198, 302, 421, 1727, 1922, 2046
NdeII	GATC	5 cut(s)	286, 1008, 1219, 1469, 1678
NlaIV	GGNNCC	4 cut(s)	312, 313, 321, 322
NmeAIII	GCCGAG	2 cut(s)	121, 581
NmuCI	GTSAC	1 cut(s)	1616
NspI	RCATGY	3 cut(s)	840, 1190, 1886
PceI	AGGCCT	2 cut(s)	165, 868
PciSI	GCTCTTC	1 cut(s)	1497
PdmI	GAANNNNTTC	3 cut(s)	1546, 1752, 2058
PfeI	GAWTC	8 cut(s)	345, 875, 899, 1268, 1403, 1514, 1547, 1998
PleI	GAGTC	5 cut(s)	125, 508, 536, 931, 2095
PmaCI	CACGTG	1 cut(s)	158
PmlI	CACGTG	1 cut(s)	158
PpsI	GAGTC	5 cut(s)	125, 508, 536, 931, 2095
Ppu21I	YACGTR	1 cut(s)	158
PpuMI	RGGWCCY	2 cut(s)	311, 320
PsiI	TTATAA	2 cut(s)	258, 588
Psp124BI	GAGCTC	2 cut(s)	426, 1343
Psp5II	RGGWCCY	2 cut(s)	311, 320
Psp6I	CCWGG	4 cut(s)	105, 504, 725, 1926
PspCI	CACGTG	1 cut(s)	158
PspGI	CCWGG	4 cut(s)	105, 504, 725, 1926
PspN4I	GGNNCC	4 cut(s)	312, 313, 321, 322
PspPI	GGNCC	3 cut(s)	311, 320, 824
PspPPI	RGGWCCY	2 cut(s)	311, 320
PsrI	GAACNNNNNNTAC	2 cut(s)	1427, 1459
PstI	CTGCAG	4 cut(s)	86, 411, 1360, 1443
PstNI	CAGNNNCTG	1 cut(s)	415
PsuI	RGATCY	2 cut(s)	1008, 1219
RsaI	GTAC	2 cut(s)	1139, 1306
RsaNI	GTAC	2 cut(s)	1138, 1305
RseI	CAYNNNNRTG	4 cut(s)	835, 1686, 1955, 2054
SacI	GAGCTC	2 cut(s)	426, 1343
SacII	CCGCGG	1 cut(s)	193
SapI	GCTCTTC	1 cut(s)	1497
SaqAI	TTAA	3 cut(s)	453, 857, 2098
Sau3AI	GATC	5 cut(s)	286, 1008, 1219, 1469, 1678
Sau96I	GGNCC	3 cut(s)	311, 320, 824
SchI	GAGTC	5 cut(s)	126, 508, 536, 932, 2096
ScrFI	CCNGG	4 cut(s)	107, 506, 727, 1928
SduI	GDGCHC	2 cut(s)	426, 1343
SfaNI	GCATC	5 cut(s)	142, 292, 1342, 1974, 2056
SfcI	CTRYAG	5 cut(s)	82, 407, 963, 1356, 1439
Sfr303I	CCGCGG	1 cut(s)	193
SgrBI	CCGCGG	1 cut(s)	193
SinI	GGWCC	2 cut(s)	311, 320
SmiMI	CAYNNNNRTG	4 cut(s)	835, 1686, 1955, 2054
SseBI	AGGCCT	2 cut(s)	165, 868
SspI	AATATT	3 cut(s)	1144, 1415, 2080
SspMI	CTAG	3 cut(s)	695, 980, 1917
SstI	GAGCTC	2 cut(s)	426, 1343
StuI	AGGCCT	2 cut(s)	165, 868
StyD4I	CCNGG	4 cut(s)	105, 504, 725, 1926
StyI	CCWWGG	1 cut(s)	306
TaaI	ACNGT	2 cut(s)	37, 1616
TaiI	ACGT	4 cut(s)	160, 578, 1436, 1878
TaqI	TCGA	4 cut(s)	525, 1759, 1968, 2090
TatI	WGTACW	1 cut(s)	1137
TauI	GCSGC	5 cut(s)	192, 195, 415, 595, 1029
TfiI	GAWTC	8 cut(s)	345, 875, 899, 1268, 1403, 1514, 1547, 1998
Tru1I	TTAA	3 cut(s)	453, 857, 2098
Tru9I	TTAA	3 cut(s)	453, 857, 2098
TscAI	CASTG	7 cut(s)	40, 891, 909, 1131, 1621, 2012, 2056
TseFI	GTSAC	1 cut(s)	1616
TseI	GCWGC	5 cut(s)	84, 409, 908, 1355, 1559
Tsp45I	GTSAC	1 cut(s)	1616
TspDTI	ATGAA	7 cut(s)	1136, 1407, 1425, 1506, 1761, 1778, 1872
TspGWI	ACGGA	1 cut(s)	1269
TspRI	CASTG	7 cut(s)	40, 891, 909, 1131, 1621, 2012, 2056
VpaK11BI	GGWCC	2 cut(s)	311, 320
XapI	RAATTY	3 cut(s)	1131, 1526, 1935
XceI	RCATGY	3 cut(s)	840, 1190, 1886
XmiI	GTMKAC	1 cut(s)	1868
XmnI	GAANNNNTTC	3 cut(s)	1546, 1752, 2058
XspI	CTAG	3 cut(s)	695, 980, 1917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.