Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0005066

Physical Location & Seq

Genomic Coordinates Reverse (-)

15941553 .. 15943671

Gene Structure 2119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0188400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGTCTATGGTTGGAAAAGGAGAAGGTCCAGCTATTGGTATAGATCTTGGAACAACTTACTCATGCGTTGGCGTCTGGCAACACGGTCACGTTGAGATCATAGCCAATGACCAGGGCAACAGAACAACGCCTTCTTACGTTGCTTTTACGGATACTGGGCGTTTGATTGGTGATGCTGCCAAGAACCAAGCCTCCATGAACCCCATTAACACTGTTTTTGATGCAAAGCGGTTGATTGGTAGGAGATTCAACGATGCTTCTGTCAAGAGTGATATGAACTTTTGGCCCTTCAAAGTTCGTGGTGTCGACAACAAGCCAATGATTGTGGTCAACTACAATAATGAAGAGAAGCGGTTTGCTGCTGAGGAGATATCATCCATGATTCTTGTTAAGATGAGGGAAATAGCAGAGGCTTATCTTGGATCGACAGTAAAGAATGCTGTTGTAACGGTCCCAGCATACTTTAATGATTTTCAACGTCAGGCTACAAAAGATGCTGGGATAATTGCGGGTATGAATGTTTTACGTATTATTAACGAGCCTACAGCTGCTGCAATTGCTTATGGCCTTGACAGAAAATACACCACTGTTGGAGGAAAGAACGTTCTTATTTTTGATCTGGGAGGTGGAACTTTTGATGTTTCCCTTCTCAAAATTGAAGAGGGAATTTTTGAGGTGAAAGCTACGACTGGAGATACTCATCTCGGGGGTGAAGATTTTGACAATACAATGATGAACTATTTTGTACAAGAGTTCAAGAGAAAACACGGAAAGGACATCAGTAAAAATCCCAAAGCACTGAGGAGATTGAGAACATCTTGTGAGAGAGCGAAGAGAATTCTTTCTTCCAGTACTCAAACTATTATTGAGATTGATTCTTTATATGATGGAATTGACTTTTCCTCCACAATAACTAGAGCAAGATTTGAGGAGCTGAACATGGATCTCTTTAAGAAATGTATGGAGCCTGTGGACAAGTGTTTGAAGGATGCTGAAATGGACAAGAGCAGCGTTCATGATGTTGTTCTTATTGGTGGATCTACTAGAATTCCCAAGGTACAACAGCTATTGCGGGAGTTCTTTAATGGCAAAGAGCTTTGCAAGAGCATCAATCCTGATGAAGCTGTGGCATATGGTGCCGCCGTACAAGCCGCAATTTTGGGCGGTGAGGGAAATATTGAGAAGGTTCAAGACGTACTCTTGTTGGACGTCACTCCGCTTTCCCTTGGTATAGAGAGTGATAATGGAAAGATGAGTGTTGTAGTCCCAAGAAACACTACCATCCCCACCACGAAAGAGAGTGTCTTTACAACAGTCCAAAGTGGGCAACAATGTGTAGAGTTTCCTGTGTATGAGGGTGAATCAATAATAGCCAAACAGAACAGATTGTTGGGTATATTTGAGCTCAAAGGCATCCAATGTGCTCCAAAGGGAGTGCCTCAGCTTAACGTTTGCTTTAACATTGATGCCAACGGAATTATGGTTGTCTCTGCCGAGGACAAATCAACGAAGAAGAAAAGCAAGATCACAATCGTCAATAACAACAAAGGCAGGCTATCTAAGATGGAAATTGCGAGGATGATCAAGGAGGCAGAAAAGTACAGGTTTGAAGATGAGGAGAATAAGAAGAAATTGGAGGCTAAGGCTGCATTGATGGACTATACACATGACATGGAGGAAAAAATTCCTAGTCTCAGAAAGCTCAACCGAGCGAACAAGAAGAAATATGAGGATGAGGTTGCAAAGACCTGCCGGTGGCTTGACGAGAACGAAAACCGACTTGCTGAATGCAAAGAATATGAGGACCAGATGAAAAAGCTTGAGAACGTTTGCAATCGCATAATTGGCAAGATGCACCAGGATGGGCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000120 GO:0000976 GO:0001013 GO:0001046 GO:0001047 GO:0001067 GO:0001163 GO:0001164 GO:0001188 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0005668 GO:0005730 GO:0006139 GO:0006351 GO:0006352 GO:0006360 GO:0006361 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016043 GO:0016070 GO:0018130 GO:0019438 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044798 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0065003 GO:0065004 GO:0070013 GO:0070860 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1990837

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RRN7

Protein Analysis

623

Amino Acids

69.55

Weight (kDa)

7.85

Isoelectric Point (pI)

35.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	11 - 619	6.2e-236	Hsp70 protein
MreB_Mbl	PF06723	131 - 381	9.3e-14	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005066)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42615 AT2G02955
fragaria_vesca	FvH4_3g26291
malus_domestica	MD04G1025400.v1.1
prunus_persica	Prupe.1G174900_v2.0.a1 Prupe.1G174900_v2.0.a1
pyrus_communis	pycom04g02160
rosa_chinensis	RchiOBHm_Chr5g0048631 RchiOBHm_Chr5g0048641 RchiOBHm_Chr7g0220011 RchiOBHm_Chr7g0220021
rosa_laevigata	RLG00000002264 RLG00000034545
rosa_multiflora	Rmu_sc0005838.1_g000011 Rmu_sc0011175.1_g000001 Rmu_sc0017790.1_g000001
rosa_roxburghii	Rroxscaffold_1G00033160 Rroxscaffold_3G00239820
rosa_rugosa	Rorug05G0240600 Rorug07G0188400
rosa_samantha	Rh5AG319800 Rh5BG330000 Rh5CG356000 Rh5DG341200 Rh7AG332200 Rh7CG349700 Rh7DG327900
rosa_wichuraiana	Rw5G029910 Rw5G030190 Rw7G027980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1212
Acc36I	ACCTGC	1 cut(s)	1757
AccB1I	GGYRCC	1 cut(s)	1136
AccB7I	CCANNNNNTGG	1 cut(s)	35
AccI	GTMKAC	1 cut(s)	306
AciI	CCGC	8 cut(s)	229, 352, 509, 1072, 1140, 1152, 1164, 1217
AclI	AACGTT	3 cut(s)	603, 1449, 1827
AclWI	GGATC	3 cut(s)	430, 951, 1045
AcsI	RAATTY	4 cut(s)	666, 837, 1047, 1683
AcyI	GRCGYC	2 cut(s)	72, 1209
AfaI	GTAC	6 cut(s)	747, 853, 1059, 1146, 1197, 1601
AfiI	CCNNNNNNNGG	2 cut(s)	35, 1755
AgsI	TTSAA	8 cut(s)	250, 292, 476, 659, 757, 985, 1190, 1610
AjnI	CCWGG	2 cut(s)	111, 1857
AjuI	GAANNNNNNNTTGG	2 cut(s)	1373, 1405
AloI	GAACNNNNNNTCC	4 cut(s)	176, 208, 588, 620
Alw21I	GWGCWC	2 cut(s)	1407, 1426
Alw26I	GTCTC	2 cut(s)	1492, 1697
AlwI	GGATC	3 cut(s)	430, 951, 1045
AlwNI	CAGNNNCTG	1 cut(s)	551
Ama87I	CYCGRG	1 cut(s)	704
AoxI	GGCC	2 cut(s)	284, 565
ApeKI	GCWGC	6 cut(s)	176, 359, 548, 551, 1008, 1646
ApoI	RAATTY	4 cut(s)	666, 837, 1047, 1683
Asp700I	GAANNNNTTC	2 cut(s)	841, 1683
AspS9I	GGNCC	4 cut(s)	26, 285, 451, 1804
AsuHPI	GGTGA	5 cut(s)	182, 688, 722, 1178, 1370
AvaI	CYCGRG	1 cut(s)	704
AvaII	GGWCC	3 cut(s)	26, 451, 1804
BanI	GGYRCC	1 cut(s)	1136
BanII	GRGCYC	1 cut(s)	1407
Bbv12I	GWGCWC	2 cut(s)	1407, 1426
BbvCI	CCTCAGC	2 cut(s)	363, 1440
BbvI	GCAGC	6 cut(s)	163, 346, 535, 538, 1020, 1633
BccI	CCATC	5 cut(s)	881, 1289, 1558, 1648, 1856
BceAI	ACGGC	1 cut(s)	1127
BciT130I	CCWGG	2 cut(s)	113, 1859
BciVI	GTATCC	1 cut(s)	145
BclI	TGATCA	1 cut(s)	1581
BcoDI	GTCTC	2 cut(s)	1492, 1697
BfaI	CTAG	3 cut(s)	915, 1044, 1689
BfmI	CTRYAG	1 cut(s)	543
BfuAI	ACCTGC	1 cut(s)	1757
BfuI	GTATCC	1 cut(s)	145
BglII	AGATCT	1 cut(s)	43
BisI	GCNGC	8 cut(s)	177, 360, 549, 552, 1009, 1140, 1152, 1647
BlsI	GCNGC	8 cut(s)	178, 361, 550, 553, 1010, 1141, 1153, 1648
BmcAI	AGTACT	1 cut(s)	853
Bme1390I	CCNGG	2 cut(s)	113, 1859
Bme18I	GGWCC	3 cut(s)	26, 451, 1804
BmeT110I	CYCGRG	1 cut(s)	704
BmgT120I	GGNCC	4 cut(s)	26, 285, 451, 1804
BmiI	GGNNCC	3 cut(s)	453, 966, 1138
BmrFI	CCNGG	2 cut(s)	113, 1859
BmrI	ACTGGG	1 cut(s)	165
BmsI	GCATC	9 cut(s)	163, 211, 244, 484, 979, 1116, 1422, 1456, 1842
BmuI	ACTGGG	1 cut(s)	165
BpmI	CTGGAG	1 cut(s)	711
Bpu10I	CCTNAGC	3 cut(s)	363, 1440, 1641
BpuEI	CTTGAG	1 cut(s)	1841
BsaAI	YACGTR	1 cut(s)	527
BsaBI	GATNNNNATC	2 cut(s)	699, 1529
BsaHI	GRCGYC	2 cut(s)	72, 1209
BsaJI	CCNNGG	4 cut(s)	112, 1053, 1225, 1494
BsaXI	ACNNNNNCTCC	4 cut(s)	176, 206, 887, 917
Bsc4I	CCNNNNNNNGG	2 cut(s)	35, 1755
Bse118I	RCCGGY	1 cut(s)	1752
Bse1I	ACTGG	3 cut(s)	160, 694, 849
Bse8I	GATNNNNATC	2 cut(s)	699, 1529
BseBI	CCWGG	2 cut(s)	113, 1859
BseDI	CCNNGG	4 cut(s)	112, 1053, 1225, 1494
BseGI	GGATG	7 cut(s)	374, 994, 1281, 1413, 1584, 1738, 1867
BseJI	GATNNNNATC	2 cut(s)	699, 1529
BseLI	CCNNNNNNNGG	2 cut(s)	35, 1755
BseMII	CTCAG	4 cut(s)	354, 791, 1454, 1708
BseNI	ACTGG	3 cut(s)	160, 694, 849
BseRI	GAGGAG	4 cut(s)	380, 817, 944, 1631
BseXI	GCAGC	6 cut(s)	163, 346, 535, 538, 1020, 1633
BseYI	CCCAGC	2 cut(s)	454, 497
BshFI	GGCC	2 cut(s)	286, 567
BshNI	GGYRCC	1 cut(s)	1136
BsiHKAI	GWGCWC	2 cut(s)	1407, 1426
BsiHKCI	CYCGRG	1 cut(s)	704
BsiSI	CCGG	1 cut(s)	1753
BslFI	GGGAC	2 cut(s)	437, 1250
BslI	CCNNNNNNNGG	2 cut(s)	35, 1755
BsmAI	GTCTC	2 cut(s)	1492, 1697
BsmFI	GGGAC	2 cut(s)	437, 1250
BsmI	GAATGC	2 cut(s)	442, 1793
BsnI	GGCC	2 cut(s)	286, 567
BsoBI	CYCGRG	1 cut(s)	704
Bsp1286I	GDGCHC	2 cut(s)	1407, 1426
Bsp1407I	TGTACA	1 cut(s)	745
Bsp143I	GATC	8 cut(s)	43, 96, 422, 616, 943, 1037, 1524, 1581
BspACI	CCGC	8 cut(s)	229, 352, 509, 1072, 1140, 1152, 1164, 1217
BspANI	GGCC	2 cut(s)	286, 567
BspCNI	CTCAG	4 cut(s)	355, 792, 1453, 1707
BspHI	TCATGA	1 cut(s)	1015
BspLI	GGNNCC	3 cut(s)	453, 966, 1138
BspMI	ACCTGC	1 cut(s)	1757
BspPI	GGATC	3 cut(s)	430, 951, 1045
BspT107I	GGYRCC	1 cut(s)	1136
BsrFI	RCCGGY	1 cut(s)	1752
BsrGI	TGTACA	1 cut(s)	745
BsrI	ACTGG	3 cut(s)	160, 694, 849
BssAI	RCCGGY	1 cut(s)	1752
BssECI	CCNNGG	4 cut(s)	112, 1053, 1225, 1494
BssMI	GATC	8 cut(s)	43, 96, 422, 616, 943, 1037, 1524, 1581
BssNI	GRCGYC	2 cut(s)	72, 1209
BssT1I	CCWWGG	2 cut(s)	1053, 1225
Bst2UI	CCWGG	2 cut(s)	113, 1859
Bst4CI	ACNGT	6 cut(s)	86, 214, 430, 451, 589, 1315
Bst6I	CTCTTC	3 cut(s)	339, 654, 827
BstACI	GRCGYC	2 cut(s)	72, 1209
BstAPI	GCANNNNNTGC	1 cut(s)	1136
BstAUI	TGTACA	1 cut(s)	745
BstBAI	YACGTR	1 cut(s)	527
BstC8I	GCNNGC	1 cut(s)	1553
BstDEI	CTNAG	6 cut(s)	363, 800, 1440, 1560, 1641, 1694
BstF5I	GGATG	7 cut(s)	374, 994, 1281, 1413, 1584, 1738, 1867
BstKTI	GATC	8 cut(s)	46, 99, 425, 619, 946, 1040, 1527, 1584
BstMAI	GTCTC	2 cut(s)	1492, 1697
BstMBI	GATC	8 cut(s)	43, 96, 422, 616, 943, 1037, 1524, 1581
BstMWI	GCNNNNNNNGC	5 cut(s)	557, 1136, 1148, 1646, 1845
BstNI	CCWGG	2 cut(s)	113, 1859
BstSCI	CCNGG	2 cut(s)	111, 1857
BstSFI	CTRYAG	1 cut(s)	543
BstSNI	TACGTA	1 cut(s)	527
BstV1I	GCAGC	6 cut(s)	163, 346, 535, 538, 1020, 1633
BstX2I	RGATCY	3 cut(s)	43, 943, 1037
BstYI	RGATCY	3 cut(s)	43, 943, 1037
BsuI	GTATCC	1 cut(s)	145
BsuRI	GGCC	2 cut(s)	286, 567
BtsCI	GGATG	7 cut(s)	374, 994, 1281, 1413, 1584, 1738, 1867
BtsIMutI	CAGTG	3 cut(s)	210, 585, 797
BveI	ACCTGC	1 cut(s)	1757
Cac8I	GCNNGC	1 cut(s)	1553
CaiI	CAGNNNCTG	1 cut(s)	551
CciI	TCATGA	1 cut(s)	1015
Cfr10I	RCCGGY	1 cut(s)	1752
Cfr13I	GGNCC	4 cut(s)	26, 285, 451, 1804
CseI	GACGC	1 cut(s)	61
Csp6I	GTAC	6 cut(s)	746, 852, 1058, 1145, 1196, 1600
CspCI	CAANNNNNGTGG	4 cut(s)	280, 306, 315, 341
CviAII	CATG	7 cut(s)	63, 196, 379, 940, 1016, 1667, 1672
CviQI	GTAC	6 cut(s)	746, 852, 1058, 1145, 1196, 1600
DdeI	CTNAG	6 cut(s)	363, 800, 1440, 1560, 1641, 1694
DpnI	GATC	8 cut(s)	45, 98, 424, 618, 945, 1039, 1526, 1583
DpnII	GATC	8 cut(s)	43, 96, 422, 616, 943, 1037, 1524, 1581
Eam1104I	CTCTTC	3 cut(s)	339, 654, 827
EarI	CTCTTC	3 cut(s)	339, 654, 827
Ecl136II	GAGCTC	1 cut(s)	1405
Eco105I	TACGTA	1 cut(s)	527
Eco130I	CCWWGG	2 cut(s)	1053, 1225
Eco24I	GRGCYC	1 cut(s)	1407
Eco32I	GATATC	1 cut(s)	372
Eco47I	GGWCC	3 cut(s)	26, 451, 1804
Eco53kI	GAGCTC	1 cut(s)	1405
Eco88I	CYCGRG	1 cut(s)	704
EcoICRI	GAGCTC	1 cut(s)	1405
EcoRI	GAATTC	2 cut(s)	837, 1047
EcoRII	CCWGG	2 cut(s)	111, 1857
EcoRV	GATATC	1 cut(s)	372
EcoT14I	CCWWGG	2 cut(s)	1053, 1225
EcoT38I	GRGCYC	1 cut(s)	1407
ErhI	CCWWGG	2 cut(s)	1053, 1225
FaeI	CATG	7 cut(s)	66, 199, 382, 943, 1019, 1670, 1675
FaqI	GGGAC	2 cut(s)	437, 1250
FatI	CATG	7 cut(s)	62, 195, 378, 939, 1015, 1666, 1671
FauI	CCCGC	2 cut(s)	502, 1065
FauNDI	CATATG	1 cut(s)	1132
FbaI	TGATCA	1 cut(s)	1581
FblI	GTMKAC	1 cut(s)	306
Fnu4HI	GCNGC	8 cut(s)	177, 360, 549, 552, 1009, 1140, 1152, 1647
FokI	GGATG	6 cut(s)	361, 1001, 1268, 1400, 1591, 1745
FriOI	GRGCYC	1 cut(s)	1407
Fsp4HI	GCNGC	8 cut(s)	177, 360, 549, 552, 1009, 1140, 1152, 1647
FspBI	CTAG	3 cut(s)	915, 1044, 1689
GluI	GCNGC	8 cut(s)	177, 360, 549, 552, 1009, 1140, 1152, 1647
GsaI	CCCAGC	2 cut(s)	458, 501
GsuI	CTGGAG	1 cut(s)	711
HaeIII	GGCC	2 cut(s)	286, 567
HapII	CCGG	1 cut(s)	1753
HgaI	GACGC	1 cut(s)	61
Hin1I	GRCGYC	2 cut(s)	72, 1209
Hin1II	CATG	7 cut(s)	66, 199, 382, 943, 1019, 1670, 1675
HincII	GTYRAC	2 cut(s)	307, 331
HindII	GTYRAC	2 cut(s)	307, 331
HindIII	AAGCTT	1 cut(s)	1817
HinfI	GANTC	4 cut(s)	246, 382, 875, 1361
HpaII	CCGG	1 cut(s)	1753
HphI	GGTGA	5 cut(s)	182, 688, 722, 1178, 1370
Hpy166II	GTNNAC	3 cut(s)	307, 331, 973
Hpy188I	TCNGA	1 cut(s)	1697
Hpy188III	TCNNGA	5 cut(s)	265, 757, 1016, 1115, 1190
Hpy8I	GTNNAC	3 cut(s)	307, 331, 973
HpyAV	CCTTC	6 cut(s)	17, 141, 298, 656, 979, 1177
HpyCH4III	ACNGT	6 cut(s)	86, 214, 430, 451, 589, 1315
HpyCH4IV	ACGT	9 cut(s)	90, 138, 478, 526, 603, 1194, 1209, 1449, 1827
HpyCH4V	TGCA	8 cut(s)	224, 554, 1101, 1649, 1742, 1791, 1833, 1855
HpyF10VI	GCNNNNNNNGC	5 cut(s)	557, 1136, 1148, 1646, 1845
HpyF3I	CTNAG	6 cut(s)	363, 800, 1440, 1560, 1641, 1694
HpySE526I	ACGT	9 cut(s)	90, 138, 478, 526, 603, 1194, 1209, 1449, 1827
Hsp92I	GRCGYC	2 cut(s)	72, 1209
Hsp92II	CATG	7 cut(s)	66, 199, 382, 943, 1019, 1670, 1675
Ksp22I	TGATCA	1 cut(s)	1581
Kzo9I	GATC	8 cut(s)	43, 96, 422, 616, 943, 1037, 1524, 1581
LmnI	GCTCC	3 cut(s)	931, 964, 1429
Lsp1109I	GCAGC	6 cut(s)	163, 346, 535, 538, 1020, 1633
LweI	GCATC	9 cut(s)	163, 211, 244, 484, 979, 1116, 1422, 1456, 1842
MaeI	CTAG	3 cut(s)	915, 1044, 1689
MaeII	ACGT	9 cut(s)	90, 138, 478, 526, 603, 1194, 1209, 1449, 1827
MaeIII	GTNAC	3 cut(s)	86, 445, 1210
MalI	GATC	8 cut(s)	45, 98, 424, 618, 945, 1039, 1526, 1583
MboI	GATC	8 cut(s)	43, 96, 422, 616, 943, 1037, 1524, 1581
MfeI	CAATTG	1 cut(s)	555
MflI	RGATCY	3 cut(s)	43, 943, 1037
MhlI	GDGCHC	2 cut(s)	1407, 1426
MmeI	TCCRAC	2 cut(s)	571, 1185
MroXI	GAANNNNTTC	2 cut(s)	841, 1683
MseI	TTAA	8 cut(s)	207, 390, 465, 534, 951, 1083, 1446, 1458
MslI	CAYNNNNRTG	1 cut(s)	1860
MspA1I	CMGCKG	1 cut(s)	548
MspI	CCGG	1 cut(s)	1753
MspR9I	CCNGG	2 cut(s)	113, 1859
MunI	CAATTG	1 cut(s)	555
Mva1269I	GAATGC	2 cut(s)	442, 1793
MvaI	CCWGG	2 cut(s)	113, 1859
MwoI	GCNNNNNNNGC	5 cut(s)	557, 1136, 1148, 1646, 1845
NdeI	CATATG	1 cut(s)	1132
NdeII	GATC	8 cut(s)	43, 96, 422, 616, 943, 1037, 1524, 1581
NlaIII	CATG	7 cut(s)	66, 199, 382, 943, 1019, 1670, 1675
NlaIV	GGNNCC	3 cut(s)	453, 966, 1138
NmeAIII	GCCGAG	1 cut(s)	1519
NmuCI	GTSAC	2 cut(s)	86, 1210
PagI	TCATGA	1 cut(s)	1015
PctI	GAATGC	2 cut(s)	442, 1793
PdmI	GAANNNNTTC	2 cut(s)	841, 1683
PfeI	GAWTC	4 cut(s)	246, 382, 875, 1361
PflMI	CCANNNNNTGG	1 cut(s)	35
PkrI	GCNGC	8 cut(s)	178, 361, 550, 553, 1010, 1141, 1153, 1648
Ppu21I	YACGTR	1 cut(s)	527
Psp124BI	GAGCTC	1 cut(s)	1407
Psp1406I	AACGTT	3 cut(s)	603, 1449, 1827
Psp6I	CCWGG	2 cut(s)	111, 1857
PspFI	CCCAGC	2 cut(s)	454, 497
PspGI	CCWGG	2 cut(s)	111, 1857
PspN4I	GGNNCC	3 cut(s)	453, 966, 1138
PspPI	GGNCC	4 cut(s)	26, 285, 451, 1804
PstNI	CAGNNNCTG	1 cut(s)	551
PsuI	RGATCY	3 cut(s)	43, 943, 1037
PvuII	CAGCTG	1 cut(s)	548
RsaI	GTAC	6 cut(s)	747, 853, 1059, 1146, 1197, 1601
RsaNI	GTAC	6 cut(s)	746, 852, 1058, 1145, 1196, 1600
RseI	CAYNNNNRTG	1 cut(s)	1860
SacI	GAGCTC	1 cut(s)	1407
SalI	GTCGAC	1 cut(s)	305
SaqAI	TTAA	8 cut(s)	207, 390, 465, 534, 951, 1083, 1446, 1458
SatI	GCNGC	8 cut(s)	177, 360, 549, 552, 1009, 1140, 1152, 1647
Sau3AI	GATC	8 cut(s)	43, 96, 422, 616, 943, 1037, 1524, 1581
Sau96I	GGNCC	4 cut(s)	26, 285, 451, 1804
ScaI	AGTACT	1 cut(s)	853
ScrFI	CCNGG	2 cut(s)	113, 1859
SduI	GDGCHC	2 cut(s)	1407, 1426
SfaNI	GCATC	9 cut(s)	163, 211, 244, 484, 979, 1116, 1422, 1456, 1842
SfcI	CTRYAG	1 cut(s)	543
SinI	GGWCC	3 cut(s)	26, 451, 1804
SmiMI	CAYNNNNRTG	1 cut(s)	1860
SmlI	CTYRAG	1 cut(s)	1820
SmoI	CTYRAG	1 cut(s)	1820
SnaBI	TACGTA	1 cut(s)	527
SsiI	CCGC	8 cut(s)	229, 352, 509, 1072, 1140, 1152, 1164, 1217
SspI	AATATT	1 cut(s)	1177
SspMI	CTAG	3 cut(s)	915, 1044, 1689
SstI	GAGCTC	1 cut(s)	1407
StyD4I	CCNGG	2 cut(s)	111, 1857
StyI	CCWWGG	2 cut(s)	1053, 1225
TaaI	ACNGT	6 cut(s)	86, 214, 430, 451, 589, 1315
TaiI	ACGT	9 cut(s)	93, 141, 481, 529, 606, 1197, 1212, 1452, 1830
TaqI	TCGA	2 cut(s)	306, 425
TatI	WGTACW	3 cut(s)	745, 851, 1599
TauI	GCSGC	2 cut(s)	1142, 1154
TfiI	GAWTC	4 cut(s)	246, 382, 875, 1361
Tru1I	TTAA	8 cut(s)	207, 390, 465, 534, 951, 1083, 1446, 1458
Tru9I	TTAA	8 cut(s)	207, 390, 465, 534, 951, 1083, 1446, 1458
TscAI	CASTG	3 cut(s)	217, 592, 804
TseFI	GTSAC	2 cut(s)	86, 1210
TseI	GCWGC	6 cut(s)	176, 359, 548, 551, 1008, 1646
Tsp45I	GTSAC	2 cut(s)	86, 1210
TspDTI	ATGAA	8 cut(s)	212, 290, 357, 530, 749, 1004, 1134, 1826
TspGWI	ACGGA	3 cut(s)	164, 783, 1488
TspRI	CASTG	3 cut(s)	217, 592, 804
Van91I	CCANNNNNTGG	1 cut(s)	35
VpaK11BI	GGWCC	3 cut(s)	26, 451, 1804
XapI	RAATTY	4 cut(s)	666, 837, 1047, 1683
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1477
XmiI	GTMKAC	1 cut(s)	306
XmnI	GAANNNNTTC	2 cut(s)	841, 1683
XspI	CTAG	3 cut(s)	915, 1044, 1689
ZraI	GACGTC	1 cut(s)	1210
ZrmI	AGTACT	1 cut(s)	853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.