Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011175.1

Orthogroup ID

OG0005066

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 6502

Gene Structure 6502 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011175.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2610 bp

ggatttcaacaaacaggaacagtagttaaccgtactgctttggtttctaatttttggagccagttcattctggtgttgaaacacgggaacaatatacattggtcaactttgcagcttgcttctaccattggggtaggaaaaggaggaggaaagattgctgctagaattttgatcgagtttacgaggaagctttcaatagaagaagagatcatcagggtgggaagaagaagaagtccaagattttggttgactttcggagcaaggtttgggtttgtttcggaagaggttgctgctagaattttgatcgagtttgggaggaagctttcaataggccttgtattgcctccgccagtagcatcaactcttttctgcaatcagctaaacagtcccactatcaaaaactcatctccaacagcaatggggaacccagatacatggcgttgccagaattgcggcaatgtggggctggaagatggcgatgatggcttcttctattgcacccagtgcaactcacaagccgaggacttcatggacaccggcgtggcggatgaggacttcctcgaccagactggcaacccatttggaggcctctactctgctcgtcacacccgtcgcattaacagctctgttgtcaaaccagagcccctctctgaacccttagacgacttgtcacctcattatcagctgtttagtcaaagccaagccaaaacaaaagatcaggatcccgtagggctcaaggatttttcatttgatgggacaaagaatgaggactattacggatggattaggcttaggtatgtgatgggattgcaacggatgattgagctccaatgtgagtctttggtcacggagttaaaggtaaatcccatgatatgtggtttggctgggaccatttggctccgcttcttggctgggactcaggttttcaatgatgattgtgctgaccagatctttgacttcaatgagtctgagatccgccaacaaggagaaccacctgaaaaattgaagatgccttctagaagccatgcacaacatcatgcaaggtatgaccctcaagcagggaaggcgtggtttaggtccttgaagaagattataccactatcttatactctagctgtttcttttctggcttgtcagcttgccagggaagcagtactgccaaccgacatggtaaaatggtccctagaaggaaagctcccatattttgctgcttttcttgaaattgaaaatgatctgaaacagtttggacagccttcacgtgcctgcccaagaagttcaagcttgatgtttaggccttctgaatcagttccagtgcagaagctagaatcactagcagcatctgttgctgggtccataggcttggacttacctccggtcaatttctatgctatcgcttcccgctttctaaataagttatctcttccagtcgaaaagattctccctcatgcgtgccgcatatatgagtggtcaatgcctccagagttatggttatctacaaatgagttgaggcttccaacacgtgtttgtgtgatgtcaatactgattgtagctgtgagaattctttataatattcatggttttggagaatgggaaagaagtttgtccagtcgtcatgcttcatcttccacttctaacaattgtggagatgaggacgccagatccagttgtgaaatgaaggatgatgctaataaggattcagatgctctgcctcacaataaagatgattcagatacaaactttgttagaaacttatcgcgtgcacataactgtaagttggatactgcagaacttttggccaaccttgaagcaagatataatgaaattgctgatgactatgaatattgcaaggacttgccgacatatctcaagttctgcaaggatacagtctttgctagatcagaaccatcgcgtaaggatgccaaggaagaaaagttaattgaatctttatggaacttctatcaaagtggaaaggattctgatacagcagtggaacaaggattgcattgtggtagaactgatgaccagaaaagaccaaggtataatgaagaatgcactagtagtagtccatctagagaaaagaagcttaggaggccatcctccaatgaagaaacttctctcgcagacgaccataagtggagccaaaatggtgctcattttggtgatagctcacagaatagtcagaactcagaagtgaatgaccaagagttagctgagactttcaaagatgaagccattaatagaatgaaattagacatggaggagaagaggttctgttatattccaccgagggtgaacctcaaaagatttgactaccttcactatgtgaggaagcaggatgaaggtgcctacacttacgctgcacatgctgactactacatactacttcgtgcttgctctagagttgcccaagtcgaaactcggtgtatgcacattggggtgttgagctttgagaggagactggcttggttggagaagagaatcgaccactgcttgcacttgatccctcctattgtatcatgtgattattgcacagacatggttcctgagaacactactgatgcagaaactattgttgaggaatcgattggactttcaaatttgaatatatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000120 GO:0000976 GO:0001013 GO:0001046 GO:0001047 GO:0001067 GO:0001163 GO:0001164 GO:0001188 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0005668 GO:0005730 GO:0006139 GO:0006351 GO:0006352 GO:0006360 GO:0006361 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016043 GO:0016070 GO:0018130 GO:0019438 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044798 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0065003 GO:0065004 GO:0070013 GO:0070860 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1990837

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RRN7

Protein Analysis

869

Amino Acids

98.49

Weight (kDa)

5.73

Isoelectric Point (pI)

60.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005066)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42615 AT2G02955
fragaria_vesca	FvH4_3g26291
malus_domestica	MD04G1025400.v1.1
prunus_persica	Prupe.1G174900_v2.0.a1 Prupe.1G174900_v2.0.a1
pyrus_communis	pycom04g02160
rosa_chinensis	RchiOBHm_Chr5g0048631 RchiOBHm_Chr5g0048641 RchiOBHm_Chr7g0220011 RchiOBHm_Chr7g0220021
rosa_laevigata	RLG00000002264 RLG00000034545
rosa_multiflora	Rmu_sc0005838.1_g000011 Rmu_sc0011175.1_g000001 Rmu_sc0017790.1_g000001
rosa_roxburghii	Rroxscaffold_1G00033160 Rroxscaffold_3G00239820
rosa_rugosa	Rorug05G0240600 Rorug07G0188400
rosa_samantha	Rh5AG319800 Rh5BG330000 Rh5CG356000 Rh5DG341200 Rh7AG332200 Rh7CG349700 Rh7DG327900
rosa_wichuraiana	Rw5G029910 Rw5G030190 Rw7G027980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1566
AccB1I	GGYRCC	1 cut(s)	2342
AccII	CGCG	2 cut(s)	1756, 1909
AciI	CCGC	7 cut(s)	347, 453, 545, 901, 976, 1399, 1453
AclWI	GGATC	5 cut(s)	716, 729, 967, 1653, 2494
AcoI	YGGCCR	1 cut(s)	1794
AcsI	RAATTY	4 cut(s)	165, 297, 1557, 2596
AcvI	CACGTG	2 cut(s)	1259, 1520
AcyI	GRCGYC	1 cut(s)	1653
AdeI	CACNNNGTG	2 cut(s)	504, 2323
AfaI	GTAC	2 cut(s)	34, 1155
AfiI	CCNNNNNNNGG	3 cut(s)	584, 907, 1058
AflIII	ACRYGT	2 cut(s)	1517, 1519
AhdI	GACNNNNNGTC	1 cut(s)	667
AhlI	ACTAGT	1 cut(s)	2054
AjnI	CCWGG	1 cut(s)	1142
AleI	CACNNNNGTG	1 cut(s)	539
AloI	GAACNNNNNNTCC	2 cut(s)	2252, 2284
Alw21I	GWGCWC	3 cut(s)	828, 1762, 2152
Alw26I	GTCTC	2 cut(s)	2207, 2449
Alw44I	GTGCAC	1 cut(s)	1758
AlwI	GGATC	5 cut(s)	716, 729, 967, 1653, 2494
AlwNI	CAGNNNCTG	1 cut(s)	1340
AoxI	GGCC	5 cut(s)	331, 586, 1292, 1794, 2090
ApaLI	GTGCAC	1 cut(s)	1758
ApeKI	GCWGC	6 cut(s)	112, 158, 290, 1208, 1334, 2357
ApoI	RAATTY	4 cut(s)	165, 297, 1557, 2596
ArsI	GACNNNNNNTTYG	2 cut(s)	935, 967
AseI	ATTAAT	1 cut(s)	2235
Asp700I	GAANNNNTTC	4 cut(s)	1305, 1434, 1972, 2267
AspS9I	GGNCC	4 cut(s)	888, 1077, 1179, 1350
AsuHPI	GGTGA	3 cut(s)	663, 2171, 2302
AvaII	GGWCC	4 cut(s)	888, 1077, 1179, 1350
BaeGI	GKGCMC	1 cut(s)	1762
BaeI	ACNNNNGTAYC	2 cut(s)	1971, 2004
BalI	TGGCCA	1 cut(s)	1796
BamHI	GGATCC	1 cut(s)	721
BanI	GGYRCC	1 cut(s)	2342
BanII	GRGCYC	3 cut(s)	645, 735, 828
BbrPI	CACGTG	2 cut(s)	1259, 1520
Bbv12I	GWGCWC	3 cut(s)	828, 1762, 2152
BbvI	GCAGC	6 cut(s)	124, 145, 277, 1195, 1346, 2344
BccI	CCATC	8 cut(s)	467, 476, 746, 774, 796, 1912, 2074, 2101
BciT130I	CCWGG	1 cut(s)	1144
BciVI	GTATCC	2 cut(s)	1771, 1873
BcoDI	GTCTC	2 cut(s)	2207, 2449
BcuI	ACTAGT	1 cut(s)	2054
BfmI	CTRYAG	1 cut(s)	1782
BfuI	GTATCC	2 cut(s)	1771, 1873
BglII	AGATCT	1 cut(s)	948
BisI	GCNGC	8 cut(s)	113, 159, 291, 454, 1209, 1335, 1453, 2358
BlsI	GCNGC	8 cut(s)	114, 160, 292, 455, 1210, 1336, 1454, 2359
BmcAI	AGTACT	1 cut(s)	1155
Bme1390I	CCNGG	1 cut(s)	1144
Bme18I	GGWCC	4 cut(s)	888, 1077, 1179, 1350
BmeRI	GACNNNNNGTC	1 cut(s)	667
BmgT120I	GGNCC	4 cut(s)	888, 1077, 1179, 1350
BmrFI	CCNGG	1 cut(s)	1144
BmrI	ACTGGG	1 cut(s)	496
BmsI	GCATC	7 cut(s)	365, 999, 1346, 1672, 1690, 1906, 2548
BmuI	ACTGGG	1 cut(s)	496
BplI	GAGNNNNNCTC	2 cut(s)	632, 664
BpmI	CTGGAG	1 cut(s)	1461
Bpu10I	CCTNAGC	2 cut(s)	791, 2084
BpuEI	CTTGAG	3 cut(s)	719, 1038, 1850
Bsa29I	ATCGAT	1 cut(s)	2582
BsaAI	YACGTR	2 cut(s)	1259, 1520
BsaBI	GATNNNNATC	1 cut(s)	720
BsaHI	GRCGYC	1 cut(s)	1653
BsaJI	CCNNGG	5 cut(s)	519, 1143, 1920, 2033, 2285
BsaWI	WCCGGW	1 cut(s)	1372
BsaXI	ACNNNNNCTCC	2 cut(s)	2252, 2282
Bsc4I	CCNNNNNNNGG	3 cut(s)	584, 907, 1058
Bse118I	RCCGGY	1 cut(s)	536
Bse1I	ACTGG	9 cut(s)	61, 350, 502, 574, 1310, 1424, 1605, 1662, 2463
Bse3DI	GCAATG	2 cut(s)	423, 463
Bse8I	GATNNNNATC	1 cut(s)	720
BseBI	CCWGG	1 cut(s)	1144
BseCI	ATCGAT	1 cut(s)	2582
BseDI	CCNNGG	5 cut(s)	519, 1143, 1920, 2033, 2285
BseGI	GGATG	7 cut(s)	553, 785, 822, 1684, 1921, 2093, 2341
BseJI	GATNNNNATC	1 cut(s)	720
BseLI	CCNNNNNNNGG	3 cut(s)	584, 907, 1058
BseMI	GCAATG	2 cut(s)	423, 463
BseMII	CTCAG	5 cut(s)	932, 960, 2199, 2202, 2535
BseNI	ACTGG	9 cut(s)	61, 350, 502, 574, 1310, 1424, 1605, 1662, 2463
BseRI	GAGGAG	3 cut(s)	159, 2273, 2467
BseSI	GKGCMC	1 cut(s)	1762
BseXI	GCAGC	6 cut(s)	124, 145, 277, 1195, 1346, 2344
BseYI	CCCAGC	3 cut(s)	884, 911, 1346
BsgI	GTGCAG	2 cut(s)	1334, 2343
Bsh1236I	CGCG	2 cut(s)	1756, 1909
BshFI	GGCC	5 cut(s)	333, 588, 1294, 1796, 2092
BshNI	GGYRCC	1 cut(s)	2342
BshVI	ATCGAT	1 cut(s)	2582
BsiHKAI	GWGCWC	3 cut(s)	828, 1762, 2152
BsiSI	CCGG	2 cut(s)	537, 1373
BslFI	GGGAC	5 cut(s)	372, 769, 901, 928, 1165
BslI	CCNNNNNNNGG	3 cut(s)	584, 907, 1058
BsmAI	GTCTC	2 cut(s)	2207, 2449
BsmFI	GGGAC	5 cut(s)	372, 769, 901, 928, 1165
BsmI	GAATGC	1 cut(s)	2054
BsnI	GGCC	5 cut(s)	333, 588, 1294, 1796, 2092
Bsp1286I	GDGCHC	5 cut(s)	645, 735, 828, 1762, 2152
BspACI	CCGC	7 cut(s)	347, 453, 545, 901, 976, 1399, 1453
BspANI	GGCC	5 cut(s)	333, 588, 1294, 1796, 2092
BspCNI	CTCAG	5 cut(s)	931, 961, 2198, 2203, 2536
BspDI	ATCGAT	1 cut(s)	2582
BspFNI	CGCG	2 cut(s)	1756, 1909
BspMAI	CTGCAG	1 cut(s)	1786
BspPI	GGATC	5 cut(s)	716, 729, 967, 1653, 2494
BspT107I	GGYRCC	1 cut(s)	2342
BsrDI	GCAATG	2 cut(s)	423, 463
BsrFI	RCCGGY	1 cut(s)	536
BsrI	ACTGG	9 cut(s)	61, 350, 502, 574, 1310, 1424, 1605, 1662, 2463
BssAI	RCCGGY	1 cut(s)	536
BssECI	CCNNGG	5 cut(s)	519, 1143, 1920, 2033, 2285
BssNI	GRCGYC	1 cut(s)	1653
BssT1I	CCWWGG	2 cut(s)	1920, 2033
Bst2UI	CCWGG	1 cut(s)	1144
Bst4CI	ACNGT	6 cut(s)	22, 32, 386, 1242, 1769, 1885
Bst6I	CTCTTC	5 cut(s)	198, 276, 1425, 2258, 2468
BstACI	GRCGYC	1 cut(s)	1653
BstAPI	GCANNNNNTGC	2 cut(s)	504, 1343
BstBAI	YACGTR	2 cut(s)	1259, 1520
BstC8I	GCNNGC	7 cut(s)	117, 1140, 1264, 1450, 1758, 2392, 2492
BstDEI	CTNAG	8 cut(s)	658, 791, 918, 969, 2084, 2185, 2211, 2544
BstENI	CCTNNNNNAGG	1 cut(s)	1056
BstF5I	GGATG	7 cut(s)	553, 785, 822, 1684, 1921, 2093, 2341
BstFNI	CGCG	2 cut(s)	1756, 1909
BstMAI	GTCTC	2 cut(s)	2207, 2449
BstMWI	GCNNNNNNNGC	9 cut(s)	450, 483, 504, 621, 1064, 1148, 1343, 2089, 2363
BstNI	CCWGG	1 cut(s)	1144
BstNSI	RCATGY	1 cut(s)	2366
BstSCI	CCNGG	1 cut(s)	1142
BstSFI	CTRYAG	1 cut(s)	1782
BstSLI	GKGCMC	1 cut(s)	1762
BstUI	CGCG	2 cut(s)	1756, 1909
BstV1I	GCAGC	6 cut(s)	124, 145, 277, 1195, 1346, 2344
BstX2I	RGATCY	4 cut(s)	721, 948, 972, 1658
BstXI	CCANNNNNNTGG	4 cut(s)	243, 435, 1360, 1485
BstYI	RGATCY	4 cut(s)	721, 948, 972, 1658
Bsu15I	ATCGAT	1 cut(s)	2582
BsuI	GTATCC	2 cut(s)	1771, 1873
BsuRI	GGCC	5 cut(s)	333, 588, 1294, 1796, 2092
BsuTUI	ATCGAT	1 cut(s)	2582
BtgZI	GCGATG	2 cut(s)	492, 1890
BtsCI	GGATG	7 cut(s)	553, 785, 822, 1684, 1921, 2093, 2341
BtsI	GCAGTG	2 cut(s)	1992, 2485
BtsIMutI	CAGTG	4 cut(s)	509, 1317, 1992, 2485
Cac8I	GCNNGC	7 cut(s)	117, 1140, 1264, 1450, 1758, 2392, 2492
CaiI	CAGNNNCTG	1 cut(s)	1340
Cfr10I	RCCGGY	1 cut(s)	536
Cfr13I	GGNCC	4 cut(s)	888, 1077, 1179, 1350
ClaI	ATCGAT	1 cut(s)	2582
CseI	GACGC	1 cut(s)	1661
Csp6I	GTAC	2 cut(s)	33, 1154
CviQI	GTAC	2 cut(s)	33, 1154
DdeI	CTNAG	8 cut(s)	658, 791, 918, 969, 2084, 2185, 2211, 2544
DraIII	CACNNNGTG	2 cut(s)	504, 2323
DriI	GACNNNNNGTC	1 cut(s)	667
EaeI	YGGCCR	1 cut(s)	1794
Eam1104I	CTCTTC	5 cut(s)	198, 276, 1425, 2258, 2468
Eam1105I	GACNNNNNGTC	1 cut(s)	667
EarI	CTCTTC	5 cut(s)	198, 276, 1425, 2258, 2468
EciI	GGCGGA	3 cut(s)	336, 560, 965
Ecl136II	GAGCTC	1 cut(s)	826
Eco130I	CCWWGG	2 cut(s)	1920, 2033
Eco147I	AGGCCT	3 cut(s)	333, 588, 1294
Eco24I	GRGCYC	3 cut(s)	645, 735, 828
Eco47I	GGWCC	4 cut(s)	888, 1077, 1179, 1350
Eco53kI	GAGCTC	1 cut(s)	826
Eco72I	CACGTG	2 cut(s)	1259, 1520
EcoICRI	GAGCTC	1 cut(s)	826
EcoNI	CCTNNNNNAGG	1 cut(s)	1056
EcoO109I	RGGNCCY	1 cut(s)	1077
EcoRI	GAATTC	1 cut(s)	1557
EcoRII	CCWGG	1 cut(s)	1142
EcoT14I	CCWWGG	2 cut(s)	1920, 2033
EcoT38I	GRGCYC	3 cut(s)	645, 735, 828
ErhI	CCWWGG	2 cut(s)	1920, 2033
FaqI	GGGAC	5 cut(s)	372, 769, 901, 928, 1165
FauI	CCCGC	1 cut(s)	1406
Fnu4HI	GCNGC	8 cut(s)	113, 159, 291, 454, 1209, 1335, 1453, 2358
FokI	GGATG	7 cut(s)	560, 792, 829, 1691, 1928, 2080, 2348
FriOI	GRGCYC	3 cut(s)	645, 735, 828
Fsp4HI	GCNGC	8 cut(s)	113, 159, 291, 454, 1209, 1335, 1453, 2358
GluI	GCNGC	8 cut(s)	113, 159, 291, 454, 1209, 1335, 1453, 2358
GsaI	CCCAGC	3 cut(s)	888, 915, 1350
GsuI	CTGGAG	1 cut(s)	1461
HaeIII	GGCC	5 cut(s)	333, 588, 1294, 1796, 2092
HapII	CCGG	2 cut(s)	537, 1373
HgaI	GACGC	1 cut(s)	1661
Hin1I	GRCGYC	1 cut(s)	1653
HincII	GTYRAC	3 cut(s)	28, 105, 249
HindII	GTYRAC	3 cut(s)	28, 105, 249
HindIII	AAGCTT	4 cut(s)	188, 320, 1279, 2081
HpaI	GTTAAC	1 cut(s)	28
HpaII	CCGG	2 cut(s)	537, 1373
HphI	GGTGA	3 cut(s)	663, 2171, 2302
Hpy166II	GTNNAC	6 cut(s)	28, 105, 180, 249, 1760, 2293
Hpy188III	TCNNGA	7 cut(s)	719, 1017, 1217, 1478, 2070, 2397, 2543
Hpy8I	GTNNAC	6 cut(s)	28, 105, 180, 249, 1760, 2293
Hpy99I	CGWCG	1 cut(s)	615
HpyAV	CCTTC	8 cut(s)	1023, 1057, 1181, 1263, 1305, 1669, 2324, 2333
HpyCH4III	ACNGT	6 cut(s)	22, 32, 386, 1242, 1769, 1885
HpyCH4IV	ACGT	2 cut(s)	1258, 1519
HpyF10VI	GCNNNNNNNGC	9 cut(s)	450, 483, 504, 621, 1064, 1148, 1343, 2089, 2363
HpyF3I	CTNAG	8 cut(s)	658, 791, 918, 969, 2084, 2185, 2211, 2544
HpySE526I	ACGT	2 cut(s)	1258, 1519
Hsp92I	GRCGYC	1 cut(s)	1653
KspAI	GTTAAC	1 cut(s)	28
LmnI	GCTCC	6 cut(s)	57, 257, 831, 903, 1200, 2136
Lsp1109I	GCAGC	6 cut(s)	124, 145, 277, 1195, 1346, 2344
LweI	GCATC	7 cut(s)	365, 999, 1346, 1672, 1690, 1906, 2548
MaeII	ACGT	2 cut(s)	1258, 1519
MaeIII	GTNAC	3 cut(s)	602, 669, 844
MfeI	CAATTG	1 cut(s)	1636
MflI	RGATCY	4 cut(s)	721, 948, 972, 1658
MhlI	GDGCHC	5 cut(s)	645, 735, 828, 1762, 2152
MlsI	TGGCCA	1 cut(s)	1796
MluNI	TGGCCA	1 cut(s)	1796
MlyI	GAGTC	3 cut(s)	845, 910, 974
MmeI	TCCRAC	4 cut(s)	434, 1538, 1755, 2448
Mox20I	TGGCCA	1 cut(s)	1796
MroXI	GAANNNNTTC	4 cut(s)	1305, 1434, 1972, 2267
MscI	TGGCCA	1 cut(s)	1796
MseI	TTAA	5 cut(s)	27, 618, 854, 1934, 2235
MslI	CAYNNNNRTG	6 cut(s)	71, 215, 539, 2157, 2435, 2534
Msp20I	TGGCCA	1 cut(s)	1796
MspA1I	CMGCKG	1 cut(s)	685
MspI	CCGG	2 cut(s)	537, 1373
MspR9I	CCNGG	1 cut(s)	1144
MunI	CAATTG	1 cut(s)	1636
Mva1269I	GAATGC	1 cut(s)	2054
MvaI	CCWGG	1 cut(s)	1144
MvnI	CGCG	2 cut(s)	1756, 1909
MwoI	GCNNNNNNNGC	9 cut(s)	450, 483, 504, 621, 1064, 1148, 1343, 2089, 2363
NmeAIII	GCCGAG	1 cut(s)	544
NmuCI	GTSAC	3 cut(s)	602, 669, 844
NspI	RCATGY	1 cut(s)	2366
OliI	CACNNNNGTG	1 cut(s)	539
PceI	AGGCCT	3 cut(s)	333, 588, 1294
PcsI	WCGNNNNNNNCGW	1 cut(s)	607
PctI	GAATGC	1 cut(s)	2054
PdmI	GAANNNNTTC	4 cut(s)	1305, 1434, 1972, 2267
PfeI	GAWTC	9 cut(s)	1301, 1325, 1435, 1694, 1724, 1940, 1973, 2478, 2579
PkrI	GCNGC	8 cut(s)	114, 160, 292, 455, 1210, 1336, 1454, 2359
PleI	GAGTC	3 cut(s)	844, 910, 973
PmaCI	CACGTG	2 cut(s)	1259, 1520
PmlI	CACGTG	2 cut(s)	1259, 1520
PpsI	GAGTC	3 cut(s)	844, 910, 973
Ppu21I	YACGTR	2 cut(s)	1259, 1520
PpuMI	RGGWCCY	1 cut(s)	1077
PshBI	ATTAAT	1 cut(s)	2235
PsiI	TTATAA	1 cut(s)	1566
Psp124BI	GAGCTC	1 cut(s)	828
Psp5II	RGGWCCY	1 cut(s)	1077
Psp6I	CCWGG	1 cut(s)	1142
PspCI	CACGTG	2 cut(s)	1259, 1520
PspFI	CCCAGC	3 cut(s)	884, 911, 1346
PspGI	CCWGG	1 cut(s)	1142
PspPI	GGNCC	4 cut(s)	888, 1077, 1179, 1350
PspPPI	RGGWCCY	1 cut(s)	1077
PstI	CTGCAG	1 cut(s)	1786
PstNI	CAGNNNCTG	1 cut(s)	1340
PsuI	RGATCY	4 cut(s)	721, 948, 972, 1658
PvuII	CAGCTG	1 cut(s)	685
RsaI	GTAC	2 cut(s)	34, 1155
RsaNI	GTAC	2 cut(s)	33, 1154
RseI	CAYNNNNRTG	6 cut(s)	71, 215, 539, 2157, 2435, 2534
SacI	GAGCTC	1 cut(s)	828
SaqAI	TTAA	5 cut(s)	27, 618, 854, 1934, 2235
SatI	GCNGC	8 cut(s)	113, 159, 291, 454, 1209, 1335, 1453, 2358
Sau96I	GGNCC	4 cut(s)	888, 1077, 1179, 1350
ScaI	AGTACT	1 cut(s)	1155
SchI	GAGTC	3 cut(s)	845, 910, 974
ScrFI	CCNGG	1 cut(s)	1144
SduI	GDGCHC	5 cut(s)	645, 735, 828, 1762, 2152
SfaNI	GCATC	7 cut(s)	365, 999, 1346, 1672, 1690, 1906, 2548
SfcI	CTRYAG	1 cut(s)	1782
SgrAI	CRCCGGYG	1 cut(s)	536
SinI	GGWCC	4 cut(s)	888, 1077, 1179, 1350
SmiMI	CAYNNNNRTG	6 cut(s)	71, 215, 539, 2157, 2435, 2534
SmlI	CTYRAG	3 cut(s)	734, 1053, 1865
SmoI	CTYRAG	3 cut(s)	734, 1053, 1865
SpeI	ACTAGT	1 cut(s)	2054
SseBI	AGGCCT	3 cut(s)	333, 588, 1294
SsiI	CCGC	7 cut(s)	347, 453, 545, 901, 976, 1399, 1453
SspI	AATATT	2 cut(s)	1570, 1841
SstI	GAGCTC	1 cut(s)	828
StuI	AGGCCT	3 cut(s)	333, 588, 1294
StyD4I	CCNGG	1 cut(s)	1142
StyI	CCWWGG	2 cut(s)	1920, 2033
TaaI	ACNGT	6 cut(s)	22, 32, 386, 1242, 1769, 1885
TaiI	ACGT	2 cut(s)	1261, 1522
TaqI	TCGA	7 cut(s)	174, 306, 561, 1428, 2412, 2481, 2582
TatI	WGTACW	1 cut(s)	1153
TauI	GCSGC	2 cut(s)	456, 1455
TfiI	GAWTC	9 cut(s)	1301, 1325, 1435, 1694, 1724, 1940, 1973, 2478, 2579
Tru1I	TTAA	5 cut(s)	27, 618, 854, 1934, 2235
Tru9I	TTAA	5 cut(s)	27, 618, 854, 1934, 2235
TscAI	CASTG	4 cut(s)	509, 1317, 1992, 2492
TseFI	GTSAC	3 cut(s)	602, 669, 844
TseI	GCWGC	6 cut(s)	112, 158, 290, 1208, 1334, 2357
Tsp45I	GTSAC	3 cut(s)	602, 669, 844
TspGWI	ACGGA	3 cut(s)	792, 829, 863
TspRI	CASTG	4 cut(s)	509, 1317, 1992, 2492
VneI	GTGCAC	1 cut(s)	1758
VpaK11BI	GGWCC	4 cut(s)	888, 1077, 1179, 1350
VspI	ATTAAT	1 cut(s)	2235
XagI	CCTNNNNNAGG	1 cut(s)	1056
XapI	RAATTY	4 cut(s)	165, 297, 1557, 2596
XbaI	TCTAGA	3 cut(s)	1016, 2069, 2396
XceI	RCATGY	1 cut(s)	2366
XmnI	GAANNNNTTC	4 cut(s)	1305, 1434, 1972, 2267
ZrmI	AGTACT	1 cut(s)	1155

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.