mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 |
| malus_domestica | MD04G1179600.v1.1 MD12G1194700.v1.1 |
| prunus_persica | Prupe.6G299600_v2.0.a1 Prupe.6G299600_v2.0.a1 |
| pyrus_communis | pycom04g15860 pycom12g18080 pycom12g18090 |
| rosa_chinensis | RchiOBHm_Chr3g0459591 |
| rosa_laevigata | RLG00000025076 |
| rosa_multiflora | Rmu_co8219898.1_g000001 Rmu_sc0023410.1_g000001 Rmu_sc0023706.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00420150 |
| rosa_rugosa | Rorug03G0036600 |
| rosa_samantha | Rh3AG095600 Rh3BG097500 Rh3CG099900 Rh3DG099200 |
| rosa_wichuraiana | Rw0G013840 Rw0G017590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 411 |
| AarI | CACCTGC | 1 cut(s) | 1499 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1905 |
| AatII | GACGTC | 1 cut(s) | 1497 |
| Acc16I | TGCGCA | 2 cut(s) | 2237, 3120 |
| Acc36I | ACCTGC | 1 cut(s) | 1499 |
| Acc65I | GGTACC | 1 cut(s) | 2349 |
| AccB1I | GGYRCC | 3 cut(s) | 2349, 2470, 3253 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 954 |
| AccII | CGCG | 1 cut(s) | 3087 |
| AclWI | GGATC | 6 cut(s) | 910, 2053, 2292, 3685, 3698, 3934 |
| AcoI | YGGCCR | 5 cut(s) | 645, 1203, 2242, 3885, 3918 |
| AcsI | RAATTY | 6 cut(s) | 634, 1240, 1555, 1794, 2147, 3391 |
| AcuI | CTGAAG | 2 cut(s) | 1337, 2025 |
| AcyI | GRCGYC | 2 cut(s) | 1494, 3914 |
| AdeI | CACNNNGTG | 2 cut(s) | 1855, 3452 |
| AfaI | GTAC | 7 cut(s) | 1155, 1446, 1881, 2351, 2371, 3503, 3954 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 344, 525, 954, 1145, 1256, 2201, 2631, 2762, 3023 |
| AflIII | ACRYGT | 3 cut(s) | 1840, 3292, 3304 |
| AhlI | ACTAGT | 1 cut(s) | 3328 |
| AjnI | CCWGG | 6 cut(s) | 251, 1065, 2345, 2563, 3256, 3677 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 626, 658, 3194, 3226 |
| Alw21I | GWGCWC | 2 cut(s) | 1851, 3278 |
| Alw44I | GTGCAC | 1 cut(s) | 1847 |
| AlwI | GGATC | 6 cut(s) | 910, 2053, 2292, 3685, 3698, 3934 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1339, 1787, 3127 |
| Ama87I | CYCGRG | 4 cut(s) | 844, 2643, 2933, 3551 |
| ApaLI | GTGCAC | 1 cut(s) | 1847 |
| ApoI | RAATTY | 6 cut(s) | 634, 1240, 1555, 1794, 2147, 3391 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 162, 194, 3554, 3586 |
| AseI | ATTAAT | 1 cut(s) | 3234 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2586 |
| Asp718I | GGTACC | 1 cut(s) | 2349 |
| AspLEI | GCGC | 5 cut(s) | 2238, 2504, 2624, 3089, 3121 |
| AsuC2I | CCSGG | 4 cut(s) | 71, 1587, 2260, 3506 |
| AsuHPI | GGTGA | 9 cut(s) | 49, 268, 359, 1502, 1526, 1870, 2096, 3619, 3805 |
| AvaI | CYCGRG | 4 cut(s) | 844, 2643, 2933, 3551 |
| AvaII | GGWCC | 8 cut(s) | 335, 958, 1898, 1999, 2192, 2492, 2647, 3046 |
| AxyI | CCTNAGG | 1 cut(s) | 311 |
| BaeGI | GKGCMC | 4 cut(s) | 1851, 1942, 2473, 3664 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1483, 1516 |
| BalI | TGGCCA | 4 cut(s) | 647, 1205, 2244, 3887 |
| BamHI | GGATCC | 1 cut(s) | 3690 |
| BanI | GGYRCC | 3 cut(s) | 2349, 2470, 3253 |
| BanII | GRGCYC | 3 cut(s) | 71, 3040, 3278 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1137, 1169 |
| BauI | CACGAG | 1 cut(s) | 3573 |
| BbsI | GAAGAC | 1 cut(s) | 240 |
| Bbv12I | GWGCWC | 2 cut(s) | 1851, 3278 |
| BccI | CCATC | 8 cut(s) | 264, 986, 1818, 2482, 2503, 3521, 3661, 3784 |
| BceAI | ACGGC | 2 cut(s) | 57, 2290 |
| BciT130I | CCWGG | 6 cut(s) | 253, 1067, 2347, 2565, 3258, 3679 |
| BciVI | GTATCC | 2 cut(s) | 1462, 3807 |
| BcnI | CCSGG | 4 cut(s) | 71, 1587, 2260, 3506 |
| BcuI | ACTAGT | 1 cut(s) | 3328 |
| BfmI | CTRYAG | 5 cut(s) | 556, 743, 798, 2523, 2721 |
| BfoI | RGCGCY | 1 cut(s) | 2505 |
| BfuAI | ACCTGC | 1 cut(s) | 1499 |
| BfuI | GTATCC | 2 cut(s) | 1462, 3807 |
| Bme18I | GGWCC | 8 cut(s) | 335, 958, 1898, 1999, 2192, 2492, 2647, 3046 |
| BmeT110I | CYCGRG | 4 cut(s) | 844, 2643, 2933, 3551 |
| BmiI | GGNNCC | 9 cut(s) | 807, 959, 2001, 2351, 2472, 2518, 2648, 3255, 3692 |
| BmsI | GCATC | 7 cut(s) | 788, 1534, 1610, 1817, 2530, 3100, 3645 |
| BpiI | GAAGAC | 1 cut(s) | 240 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3272 |
| BpuEI | CTTGAG | 4 cut(s) | 413, 1184, 2186, 2621 |
| BpuMI | CCSGG | 4 cut(s) | 71, 1587, 2260, 3506 |
| BsaAI | YACGTR | 1 cut(s) | 1448 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2328 |
| BsaHI | GRCGYC | 2 cut(s) | 1494, 3914 |
| BsaI | GGTCTC | 4 cut(s) | 279, 1223, 2545, 2661 |
| BsaJI | CCNNGG | 8 cut(s) | 252, 1200, 1360, 1646, 2626, 2976, 3257, 3678 |
| BsaWI | WCCGGW | 1 cut(s) | 3185 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1251, 1281, 2078, 2108, 2181, 2211 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 344, 525, 954, 1145, 1256, 2201, 2631, 2762, 3023 |
| Bse21I | CCTNAGG | 1 cut(s) | 311 |
| Bse3DI | GCAATG | 7 cut(s) | 195, 993, 1206, 1545, 2245, 3222, 3600 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2328 |
| BseBI | CCWGG | 6 cut(s) | 253, 1067, 2347, 2565, 3258, 3679 |
| BseDI | CCNNGG | 8 cut(s) | 252, 1200, 1360, 1646, 2626, 2976, 3257, 3678 |
| BseJI | GATNNNNATC | 1 cut(s) | 2328 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 344, 525, 954, 1145, 1256, 2201, 2631, 2762, 3023 |
| BseMI | GCAATG | 7 cut(s) | 195, 993, 1206, 1545, 2245, 3222, 3600 |
| BseRI | GAGGAG | 6 cut(s) | 196, 206, 1787, 1863, 2202, 3133 |
| BseSI | GKGCMC | 4 cut(s) | 1851, 1942, 2473, 3664 |
| BseYI | CCCAGC | 1 cut(s) | 2966 |
| BsgI | GTGCAG | 1 cut(s) | 570 |
| Bsh1236I | CGCG | 1 cut(s) | 3087 |
| BshNI | GGYRCC | 3 cut(s) | 2349, 2470, 3253 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1851, 3278 |
| BsiHKCI | CYCGRG | 4 cut(s) | 844, 2643, 2933, 3551 |
| BsiSI | CCGG | 7 cut(s) | 71, 210, 1587, 2259, 3186, 3505, 3618 |
| BslFI | GGGAC | 4 cut(s) | 1153, 1181, 1985, 2660 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 344, 525, 954, 1145, 1256, 2201, 2631, 2762, 3023 |
| BsmBI | CGTCTC | 2 cut(s) | 53, 3827 |
| BsmFI | GGGAC | 4 cut(s) | 1153, 1181, 1985, 2660 |
| BsmI | GAATGC | 1 cut(s) | 3568 |
| Bso31I | GGTCTC | 4 cut(s) | 279, 1223, 2545, 2661 |
| BsoBI | CYCGRG | 4 cut(s) | 844, 2643, 2933, 3551 |
| Bsp1286I | GDGCHC | 7 cut(s) | 71, 1851, 1942, 2473, 3040, 3278, 3664 |
| Bsp1407I | TGTACA | 1 cut(s) | 2369 |
| Bsp143I | GATC | 7 cut(s) | 533, 902, 2045, 2284, 3690, 3731, 3926 |
| Bsp19I | CCATGG | 1 cut(s) | 2626 |
| BspFNI | CGCG | 1 cut(s) | 3087 |
| BspLI | GGNNCC | 9 cut(s) | 807, 959, 2001, 2351, 2472, 2518, 2648, 3255, 3692 |
| BspMAI | CTGCAG | 4 cut(s) | 747, 802, 2527, 2725 |
| BspMI | ACCTGC | 1 cut(s) | 1499 |
| BspPI | GGATC | 6 cut(s) | 910, 2053, 2292, 3685, 3698, 3934 |
| BspQI | GCTCTTC | 1 cut(s) | 3667 |
| BspT107I | GGYRCC | 3 cut(s) | 2349, 2470, 3253 |
| BspTNI | GGTCTC | 4 cut(s) | 279, 1223, 2545, 2661 |
| BsrDI | GCAATG | 7 cut(s) | 195, 993, 1206, 1545, 2245, 3222, 3600 |
| BsrGI | TGTACA | 1 cut(s) | 2369 |
| BssECI | CCNNGG | 8 cut(s) | 252, 1200, 1360, 1646, 2626, 2976, 3257, 3678 |
| BssMI | GATC | 7 cut(s) | 533, 902, 2045, 2284, 3690, 3731, 3926 |
| BssNI | GRCGYC | 2 cut(s) | 1494, 3914 |
| BssSI | CACGAG | 1 cut(s) | 3573 |
| BssT1I | CCWWGG | 5 cut(s) | 1200, 1360, 1646, 2626, 2976 |
| Bst2BI | CACGAG | 1 cut(s) | 3573 |
| Bst2UI | CCWGG | 6 cut(s) | 253, 1067, 2347, 2565, 3258, 3679 |
| Bst4CI | ACNGT | 9 cut(s) | 297, 810, 1267, 1617, 1972, 2354, 2803, 2987, 3501 |
| Bst6I | CTCTTC | 7 cut(s) | 1356, 1722, 2491, 2933, 3181, 3537, 3667 |
| BstACI | GRCGYC | 2 cut(s) | 1494, 3914 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3341 |
| BstAUI | TGTACA | 1 cut(s) | 2369 |
| BstBAI | YACGTR | 1 cut(s) | 1448 |
| BstDSI | CCRYGG | 1 cut(s) | 2626 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1143, 3021 |
| BstFNI | CGCG | 1 cut(s) | 3087 |
| BstH2I | RGCGCY | 1 cut(s) | 2505 |
| BstHHI | GCGC | 5 cut(s) | 2238, 2504, 2624, 3089, 3121 |
| BstKTI | GATC | 7 cut(s) | 536, 905, 2048, 2287, 3693, 3734, 3929 |
| BstMBI | GATC | 7 cut(s) | 533, 902, 2045, 2284, 3690, 3731, 3926 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 1383, 1418, 1547, 2628, 2696, 2972, 3013, 3341, 3474 |
| BstNI | CCWGG | 6 cut(s) | 253, 1067, 2347, 2565, 3258, 3679 |
| BstNSI | RCATGY | 4 cut(s) | 440, 1844, 3016, 3308 |
| BstSFI | CTRYAG | 5 cut(s) | 556, 743, 798, 2523, 2721 |
| BstSLI | GKGCMC | 4 cut(s) | 1851, 1942, 2473, 3664 |
| BstSNI | TACGTA | 1 cut(s) | 1448 |
| BstUI | CGCG | 1 cut(s) | 3087 |
| BstV2I | GAAGAC | 1 cut(s) | 240 |
| BstX2I | RGATCY | 3 cut(s) | 902, 3690, 3926 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 881, 2104, 3756 |
| BstYI | RGATCY | 3 cut(s) | 902, 3690, 3926 |
| Bsu36I | CCTNAGG | 1 cut(s) | 311 |
| BsuI | GTATCC | 2 cut(s) | 1462, 3807 |
| BtgI | CCRYGG | 1 cut(s) | 2626 |
| BtsI | GCAGTG | 4 cut(s) | 807, 922, 1489, 2284 |
| BveI | ACCTGC | 1 cut(s) | 1499 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1339, 1787, 3127 |
| CfoI | GCGC | 5 cut(s) | 2238, 2504, 2624, 3089, 3121 |
| CseI | GACGC | 4 cut(s) | 8, 1057, 2049, 3903 |
| Csp6I | GTAC | 7 cut(s) | 1154, 1445, 1880, 2350, 2370, 3502, 3953 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1288, 1323, 1492, 1527 |
| CviQI | GTAC | 7 cut(s) | 1154, 1445, 1880, 2350, 2370, 3502, 3953 |
| DpnI | GATC | 7 cut(s) | 535, 904, 2047, 2286, 3692, 3733, 3928 |
| DpnII | GATC | 7 cut(s) | 533, 902, 2045, 2284, 3690, 3731, 3926 |
| DraI | TTTAAA | 2 cut(s) | 853, 2929 |
| DraIII | CACNNNGTG | 2 cut(s) | 1855, 3452 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1905 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1905 |
| EaeI | YGGCCR | 5 cut(s) | 645, 1203, 2242, 3885, 3918 |
| Eam1104I | CTCTTC | 7 cut(s) | 1356, 1722, 2491, 2933, 3181, 3537, 3667 |
| EarI | CTCTTC | 7 cut(s) | 1356, 1722, 2491, 2933, 3181, 3537, 3667 |
| EciI | GGCGGA | 2 cut(s) | 3038, 3492 |
| Ecl136II | GAGCTC | 1 cut(s) | 3276 |
| Eco105I | TACGTA | 1 cut(s) | 1448 |
| Eco130I | CCWWGG | 5 cut(s) | 1200, 1360, 1646, 2626, 2976 |
| Eco147I | AGGCCT | 1 cut(s) | 2661 |
| Eco24I | GRGCYC | 3 cut(s) | 71, 3040, 3278 |
| Eco31I | GGTCTC | 4 cut(s) | 279, 1223, 2545, 2661 |
| Eco47I | GGWCC | 8 cut(s) | 335, 958, 1898, 1999, 2192, 2492, 2647, 3046 |
| Eco53kI | GAGCTC | 1 cut(s) | 3276 |
| Eco57I | CTGAAG | 2 cut(s) | 1337, 2025 |
| Eco81I | CCTNAGG | 1 cut(s) | 311 |
| Eco88I | CYCGRG | 4 cut(s) | 844, 2643, 2933, 3551 |
| EcoICRI | GAGCTC | 1 cut(s) | 3276 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1143, 3021 |
| EcoO109I | RGGNCCY | 5 cut(s) | 1148, 1336, 1357, 1999, 2647 |
| EcoRI | GAATTC | 3 cut(s) | 634, 1240, 3391 |
| EcoRII | CCWGG | 6 cut(s) | 251, 1065, 2345, 2563, 3256, 3677 |
| EcoT14I | CCWWGG | 5 cut(s) | 1200, 1360, 1646, 2626, 2976 |
| EcoT22I | ATGCAT | 1 cut(s) | 325 |
| EcoT38I | GRGCYC | 3 cut(s) | 71, 3040, 3278 |
| ErhI | CCWWGG | 5 cut(s) | 1200, 1360, 1646, 2626, 2976 |
| Esp3I | CGTCTC | 2 cut(s) | 53, 3827 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2470, 2502, 3099, 3131 |
| FaqI | GGGAC | 4 cut(s) | 1153, 1181, 1985, 2660 |
| FauI | CCCGC | 2 cut(s) | 37, 3844 |
| FriOI | GRGCYC | 3 cut(s) | 71, 3040, 3278 |
| FspI | TGCGCA | 2 cut(s) | 2237, 3120 |
| GlaI | GCGC | 5 cut(s) | 2237, 2503, 2623, 3088, 3120 |
| GsaI | CCCAGC | 1 cut(s) | 2970 |
| HaeII | RGCGCY | 1 cut(s) | 2505 |
| HapII | CCGG | 7 cut(s) | 71, 210, 1587, 2259, 3186, 3505, 3618 |
| HgaI | GACGC | 4 cut(s) | 8, 1057, 2049, 3903 |
| HhaI | GCGC | 5 cut(s) | 2238, 2504, 2624, 3089, 3121 |
| Hin1I | GRCGYC | 2 cut(s) | 1494, 3914 |
| Hin6I | GCGC | 5 cut(s) | 2236, 2502, 2622, 3087, 3119 |
| HinP1I | GCGC | 5 cut(s) | 2236, 2502, 2622, 3087, 3119 |
| HincII | GTYRAC | 3 cut(s) | 1653, 2357, 2613 |
| HindII | GTYRAC | 3 cut(s) | 1653, 2357, 2613 |
| HindIII | AAGCTT | 5 cut(s) | 285, 684, 1539, 1862, 3762 |
| HpaI | GTTAAC | 1 cut(s) | 2613 |
| HpaII | CCGG | 7 cut(s) | 71, 210, 1587, 2259, 3186, 3505, 3618 |
| HphI | GGTGA | 9 cut(s) | 49, 268, 359, 1502, 1526, 1870, 2096, 3619, 3805 |
| Hpy166II | GTNNAC | 8 cut(s) | 617, 709, 1653, 1849, 1975, 2357, 2613, 3796 |
| Hpy8I | GTNNAC | 8 cut(s) | 617, 709, 1653, 1849, 1975, 2357, 2613, 3796 |
| Hpy99I | CGWCG | 3 cut(s) | 24, 1051, 3919 |
| HpyCH4III | ACNGT | 9 cut(s) | 297, 810, 1267, 1617, 1972, 2354, 2803, 2987, 3501 |
| HpyCH4IV | ACGT | 8 cut(s) | 488, 1132, 1447, 1494, 2213, 3158, 3294, 3836 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 1383, 1418, 1547, 2628, 2696, 2972, 3013, 3341, 3474 |
| HpySE526I | ACGT | 8 cut(s) | 488, 1132, 1447, 1494, 2213, 3158, 3294, 3836 |
| Hsp92I | GRCGYC | 2 cut(s) | 1494, 3914 |
| HspAI | GCGC | 5 cut(s) | 2236, 2502, 2622, 3087, 3119 |
| KpnI | GGTACC | 1 cut(s) | 2353 |
| KspAI | GTTAAC | 1 cut(s) | 2613 |
| Kzo9I | GATC | 7 cut(s) | 533, 902, 2045, 2284, 3690, 3731, 3926 |
| LguI | GCTCTTC | 1 cut(s) | 3667 |
| LmnI | GCTCC | 6 cut(s) | 31, 118, 427, 1952, 2522, 3808 |
| LweI | GCATC | 7 cut(s) | 788, 1534, 1610, 1817, 2530, 3100, 3645 |
| MaeII | ACGT | 8 cut(s) | 488, 1132, 1447, 1494, 2213, 3158, 3294, 3836 |
| MalI | GATC | 7 cut(s) | 535, 904, 2047, 2286, 3692, 3733, 3928 |
| MboI | GATC | 7 cut(s) | 533, 902, 2045, 2284, 3690, 3731, 3926 |
| MflI | RGATCY | 3 cut(s) | 902, 3690, 3926 |
| MhlI | GDGCHC | 7 cut(s) | 71, 1851, 1942, 2473, 3040, 3278, 3664 |
| MlsI | TGGCCA | 4 cut(s) | 647, 1205, 2244, 3887 |
| MluNI | TGGCCA | 4 cut(s) | 647, 1205, 2244, 3887 |
| MlyI | GAGTC | 6 cut(s) | 849, 1175, 2099, 2816, 3489, 3543 |
| MmeI | TCCRAC | 6 cut(s) | 184, 471, 2179, 2196, 3263, 3325 |
| Mox20I | TGGCCA | 4 cut(s) | 647, 1205, 2244, 3887 |
| Mph1103I | ATGCAT | 1 cut(s) | 325 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2586 |
| MscI | TGGCCA | 4 cut(s) | 647, 1205, 2244, 3887 |
| MslI | CAYNNNNRTG | 5 cut(s) | 328, 653, 774, 2102, 3309 |
| Msp20I | TGGCCA | 4 cut(s) | 647, 1205, 2244, 3887 |
| MspA1I | CMGCKG | 3 cut(s) | 1787, 2789, 3054 |
| MspI | CCGG | 7 cut(s) | 71, 210, 1587, 2259, 3186, 3505, 3618 |
| Mva1269I | GAATGC | 1 cut(s) | 3568 |
| MvaI | CCWGG | 6 cut(s) | 253, 1067, 2347, 2565, 3258, 3679 |
| MvnI | CGCG | 1 cut(s) | 3087 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 1383, 1418, 1547, 2628, 2696, 2972, 3013, 3341, 3474 |
| NciI | CCSGG | 4 cut(s) | 71, 1587, 2260, 3506 |
| NcoI | CCATGG | 1 cut(s) | 2626 |
| NdeII | GATC | 7 cut(s) | 533, 902, 2045, 2284, 3690, 3731, 3926 |
| NlaIV | GGNNCC | 9 cut(s) | 807, 959, 2001, 2351, 2472, 2518, 2648, 3255, 3692 |
| NmeAIII | GCCGAG | 1 cut(s) | 555 |
| NmuCI | GTSAC | 7 cut(s) | 37, 1133, 1490, 1514, 1611, 1907, 2084 |
| NsbI | TGCGCA | 2 cut(s) | 2237, 3120 |
| NsiI | ATGCAT | 1 cut(s) | 325 |
| NspI | RCATGY | 4 cut(s) | 440, 1844, 3016, 3308 |
| PaeI | GCATGC | 1 cut(s) | 3016 |
| PaeR7I | CTCGAG | 1 cut(s) | 2933 |
| PaqCI | CACCTGC | 1 cut(s) | 1499 |
| PceI | AGGCCT | 1 cut(s) | 2661 |
| PciI | ACATGT | 2 cut(s) | 1840, 3304 |
| PciSI | GCTCTTC | 1 cut(s) | 3667 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1444 |
| PctI | GAATGC | 1 cut(s) | 3568 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2586 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 954 |
| PfoI | TCCNGGA | 1 cut(s) | 2258 |
| PleI | GAGTC | 6 cut(s) | 848, 1174, 2098, 2815, 3488, 3543 |
| PpsI | GAGTC | 6 cut(s) | 848, 1174, 2098, 2815, 3488, 3543 |
| Ppu21I | YACGTR | 1 cut(s) | 1448 |
| PpuMI | RGGWCCY | 2 cut(s) | 1999, 2647 |
| PscI | ACATGT | 2 cut(s) | 1840, 3304 |
| PshBI | ATTAAT | 1 cut(s) | 3234 |
| PsiI | TTATAA | 1 cut(s) | 411 |
| Psp124BI | GAGCTC | 1 cut(s) | 3278 |
| Psp5II | RGGWCCY | 2 cut(s) | 1999, 2647 |
| Psp6I | CCWGG | 6 cut(s) | 251, 1065, 2345, 2563, 3256, 3677 |
| PspFI | CCCAGC | 1 cut(s) | 2966 |
| PspGI | CCWGG | 6 cut(s) | 251, 1065, 2345, 2563, 3256, 3677 |
| PspN4I | GGNNCC | 9 cut(s) | 807, 959, 2001, 2351, 2472, 2518, 2648, 3255, 3692 |
| PspPPI | RGGWCCY | 2 cut(s) | 1999, 2647 |
| PstI | CTGCAG | 4 cut(s) | 747, 802, 2527, 2725 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1339, 1787, 3127 |
| PsuI | RGATCY | 3 cut(s) | 902, 3690, 3926 |
| RsaI | GTAC | 7 cut(s) | 1155, 1446, 1881, 2351, 2371, 3503, 3954 |
| RsaNI | GTAC | 7 cut(s) | 1154, 1445, 1880, 2350, 2370, 3502, 3953 |
| RseI | CAYNNNNRTG | 5 cut(s) | 328, 653, 774, 2102, 3309 |
| SacI | GAGCTC | 1 cut(s) | 3278 |
| SapI | GCTCTTC | 1 cut(s) | 3667 |
| Sau3AI | GATC | 7 cut(s) | 533, 902, 2045, 2284, 3690, 3731, 3926 |
| SchI | GAGTC | 6 cut(s) | 849, 1175, 2099, 2816, 3489, 3543 |
| SduI | GDGCHC | 7 cut(s) | 71, 1851, 1942, 2473, 3040, 3278, 3664 |
| SfaNI | GCATC | 7 cut(s) | 788, 1534, 1610, 1817, 2530, 3100, 3645 |
| SfcI | CTRYAG | 5 cut(s) | 556, 743, 798, 2523, 2721 |
| Sfr274I | CTCGAG | 1 cut(s) | 2933 |
| SinI | GGWCC | 8 cut(s) | 335, 958, 1898, 1999, 2192, 2492, 2647, 3046 |
| SlaI | CTCGAG | 1 cut(s) | 2933 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 328, 653, 774, 2102, 3309 |
| SmlI | CTYRAG | 5 cut(s) | 392, 1163, 2165, 2600, 2933 |
| SmoI | CTYRAG | 5 cut(s) | 392, 1163, 2165, 2600, 2933 |
| SnaBI | TACGTA | 1 cut(s) | 1448 |
| SpeI | ACTAGT | 1 cut(s) | 3328 |
| SphI | GCATGC | 1 cut(s) | 3016 |
| SseBI | AGGCCT | 1 cut(s) | 2661 |
| SspI | AATATT | 2 cut(s) | 729, 1417 |
| SstI | GAGCTC | 1 cut(s) | 3278 |
| StuI | AGGCCT | 1 cut(s) | 2661 |
| StyI | CCWWGG | 5 cut(s) | 1200, 1360, 1646, 2626, 2976 |
| TaaI | ACNGT | 9 cut(s) | 297, 810, 1267, 1617, 1972, 2354, 2803, 2987, 3501 |
| TaiI | ACGT | 8 cut(s) | 491, 1135, 1450, 1497, 2216, 3161, 3297, 3839 |
| TaqI | TCGA | 7 cut(s) | 700, 762, 966, 1114, 2934, 3627, 3900 |
| TatI | WGTACW | 2 cut(s) | 2369, 3952 |
| TauI | GCSGC | 3 cut(s) | 1787, 3054, 3935 |
| TseFI | GTSAC | 7 cut(s) | 37, 1133, 1490, 1514, 1611, 1907, 2084 |
| Tsp45I | GTSAC | 7 cut(s) | 37, 1133, 1490, 1514, 1611, 1907, 2084 |
| TspGWI | ACGGA | 6 cut(s) | 77, 386, 950, 1295, 1302, 2195 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 954 |
| VneI | GTGCAC | 1 cut(s) | 1847 |
| VpaK11BI | GGWCC | 8 cut(s) | 335, 958, 1898, 1999, 2192, 2492, 2647, 3046 |
| VspI | ATTAAT | 1 cut(s) | 3234 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1143, 3021 |
| XapI | RAATTY | 6 cut(s) | 634, 1240, 1555, 1794, 2147, 3391 |
| XbaI | TCTAGA | 1 cut(s) | 3668 |
| XceI | RCATGY | 4 cut(s) | 440, 1844, 3016, 3308 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 655, 3308 |
| XhoI | CTCGAG | 1 cut(s) | 2933 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2586 |
| ZraI | GACGTC | 1 cut(s) | 1495 |
| Zsp2I | ATGCAT | 1 cut(s) | 325 |