mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 |
| malus_domestica | MD04G1179600.v1.1 MD12G1194700.v1.1 |
| prunus_persica | Prupe.6G299600_v2.0.a1 Prupe.6G299600_v2.0.a1 |
| pyrus_communis | pycom04g15860 pycom12g18080 pycom12g18090 |
| rosa_chinensis | RchiOBHm_Chr3g0459591 |
| rosa_laevigata | RLG00000025076 |
| rosa_multiflora | Rmu_co8219898.1_g000001 Rmu_sc0023410.1_g000001 Rmu_sc0023706.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00420150 |
| rosa_rugosa | Rorug03G0036600 |
| rosa_samantha | Rh3AG095600 Rh3BG097500 Rh3CG099900 Rh3DG099200 |
| rosa_wichuraiana | Rw0G013840 Rw0G017590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2275 |
| Acc16I | TGCGCA | 2 cut(s) | 2249, 3126 |
| Acc36I | ACCTGC | 2 cut(s) | 2275, 3285 |
| AccB1I | GGYRCC | 2 cut(s) | 1536, 1681 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 356, 963, 2870, 3636 |
| AccBSI | CCGCTC | 1 cut(s) | 40 |
| AccII | CGCG | 1 cut(s) | 809 |
| AclWI | GGATC | 8 cut(s) | 1139, 1801, 1918, 2065, 2304, 3169, 3610, 3746 |
| AcoI | YGGCCR | 3 cut(s) | 654, 1212, 2254 |
| AcsI | RAATTY | 5 cut(s) | 643, 802, 1050, 1249, 2159 |
| AcuI | CTGAAG | 3 cut(s) | 2037, 2084, 3906 |
| AdeI | CACNNNGTG | 3 cut(s) | 1867, 3304, 3458 |
| AfaI | GTAC | 4 cut(s) | 1455, 1893, 2330, 3509 |
| AflIII | ACRYGT | 3 cut(s) | 1852, 2553, 3298 |
| AjnI | CCWGG | 6 cut(s) | 263, 1074, 2357, 3262, 3527, 3683 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 635, 667, 3200, 3232, 3627, 3659 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2406, 2438 |
| Alw21I | GWGCWC | 2 cut(s) | 1863, 1954 |
| Alw26I | GTCTC | 6 cut(s) | 532, 2408, 2557, 2673, 3642, 3833 |
| Alw44I | GTGCAC | 1 cut(s) | 1859 |
| AlwI | GGATC | 8 cut(s) | 1139, 1801, 1918, 2065, 2304, 3169, 3610, 3746 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1280, 1348, 2543, 3133 |
| Ama87I | CYCGRG | 4 cut(s) | 2316, 2655, 2939, 3557 |
| ApaLI | GTGCAC | 1 cut(s) | 1859 |
| ApoI | RAATTY | 5 cut(s) | 643, 802, 1050, 1249, 2159 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3560, 3592 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2598 |
| AspLEI | GCGC | 3 cut(s) | 2250, 3127, 3245 |
| AsuC2I | CCSGG | 4 cut(s) | 1599, 2272, 2656, 2657 |
| AsuHPI | GGTGA | 8 cut(s) | 70, 371, 1538, 1632, 2108, 3217, 3625, 3811 |
| AsuNHI | GCTAGC | 1 cut(s) | 3374 |
| AvaI | CYCGRG | 4 cut(s) | 2316, 2655, 2939, 3557 |
| AxyI | CCTNAGG | 1 cut(s) | 220 |
| BaeGI | GKGCMC | 2 cut(s) | 1684, 1863 |
| BalI | TGGCCA | 3 cut(s) | 656, 1214, 2256 |
| BanI | GGYRCC | 2 cut(s) | 1536, 1681 |
| BanII | GRGCYC | 3 cut(s) | 83, 289, 3046 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1146, 1178 |
| BbsI | GAAGAC | 1 cut(s) | 252 |
| Bbv12I | GWGCWC | 2 cut(s) | 1863, 1954 |
| BccI | CCATC | 6 cut(s) | 995, 1310, 1830, 2494, 2515, 3956 |
| BceAI | ACGGC | 2 cut(s) | 78, 762 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3353, 3387 |
| BciT130I | CCWGG | 6 cut(s) | 265, 1076, 2359, 3264, 3529, 3685 |
| BcnI | CCSGG | 4 cut(s) | 1599, 2272, 2656, 2657 |
| BcoDI | GTCTC | 6 cut(s) | 532, 2408, 2557, 2673, 3642, 3833 |
| BfmI | CTRYAG | 5 cut(s) | 752, 1361, 2164, 2535, 2733 |
| BfoI | RGCGCY | 1 cut(s) | 3246 |
| BfuAI | ACCTGC | 2 cut(s) | 2275, 3285 |
| BlpI | GCTNAGC | 1 cut(s) | 288 |
| BmeT110I | CYCGRG | 4 cut(s) | 2316, 2655, 2939, 3557 |
| BmrI | ACTGGG | 5 cut(s) | 77, 121, 1718, 1782, 2487 |
| BmtI | GCTAGC | 1 cut(s) | 3378 |
| BmuI | ACTGGG | 5 cut(s) | 77, 121, 1718, 1782, 2487 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2556 |
| BpiI | GAAGAC | 1 cut(s) | 252 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3434, 3466 |
| BpmI | CTGGAG | 2 cut(s) | 56, 2565 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 288 |
| BpuEI | CTTGAG | 4 cut(s) | 1193, 2198, 2633, 3658 |
| BpuMI | CCSGG | 4 cut(s) | 1599, 2272, 2656, 2657 |
| Bsa29I | ATCGAT | 1 cut(s) | 389 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2340 |
| BsaI | GGTCTC | 4 cut(s) | 532, 2408, 2557, 2673 |
| BsaWI | WCCGGW | 1 cut(s) | 3811 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1260, 1290, 1775, 1805, 2193, 2223 |
| Bse118I | RCCGGY | 2 cut(s) | 180, 882 |
| Bse21I | CCTNAGG | 1 cut(s) | 220 |
| Bse3DI | GCAATG | 7 cut(s) | 1002, 1215, 1557, 2257, 3228, 3426, 3606 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2340 |
| BseBI | CCWGG | 6 cut(s) | 265, 1076, 2359, 3264, 3529, 3685 |
| BseCI | ATCGAT | 1 cut(s) | 389 |
| BseJI | GATNNNNATC | 1 cut(s) | 2340 |
| BseMI | GCAATG | 7 cut(s) | 1002, 1215, 1557, 2257, 3228, 3426, 3606 |
| BseMII | CTCAG | 7 cut(s) | 234, 302, 428, 807, 1128, 2666, 3125 |
| BseRI | GAGGAG | 9 cut(s) | 208, 218, 1796, 1799, 1875, 2214, 2217, 2229, 3139 |
| BseSI | GKGCMC | 2 cut(s) | 1684, 1863 |
| BseYI | CCCAGC | 1 cut(s) | 2972 |
| BsgI | GTGCAG | 2 cut(s) | 2247, 3326 |
| Bsh1236I | CGCG | 1 cut(s) | 809 |
| BshNI | GGYRCC | 2 cut(s) | 1536, 1681 |
| BshVI | ATCGAT | 1 cut(s) | 389 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1863, 1954 |
| BsiHKCI | CYCGRG | 4 cut(s) | 2316, 2655, 2939, 3557 |
| BsiSI | CCGG | 6 cut(s) | 181, 883, 1599, 2272, 2656, 3812 |
| BslFI | GGGAC | 6 cut(s) | 1190, 1359, 1997, 2495, 2672, 3403 |
| BsmAI | GTCTC | 6 cut(s) | 532, 2408, 2557, 2673, 3642, 3833 |
| BsmBI | CGTCTC | 1 cut(s) | 3833 |
| BsmFI | GGGAC | 6 cut(s) | 1190, 1359, 1997, 2495, 2672, 3403 |
| BsmI | GAATGC | 1 cut(s) | 997 |
| Bso31I | GGTCTC | 4 cut(s) | 532, 2408, 2557, 2673 |
| BsoBI | CYCGRG | 4 cut(s) | 2316, 2655, 2939, 3557 |
| Bsp1286I | GDGCHC | 6 cut(s) | 83, 289, 1684, 1863, 1954, 3046 |
| Bsp1407I | TGTACA | 2 cut(s) | 2328, 3507 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 288 |
| Bsp19I | CCATGG | 3 cut(s) | 9, 96, 588 |
| BspCNI | CTCAG | 7 cut(s) | 233, 301, 427, 806, 1127, 2667, 3126 |
| BspDI | ATCGAT | 1 cut(s) | 389 |
| BspFNI | CGCG | 1 cut(s) | 809 |
| BspHI | TCATGA | 2 cut(s) | 622, 2425 |
| BspMAI | CTGCAG | 3 cut(s) | 756, 2539, 2737 |
| BspMI | ACCTGC | 2 cut(s) | 2275, 3285 |
| BspOI | GCTAGC | 1 cut(s) | 3378 |
| BspPI | GGATC | 8 cut(s) | 1139, 1801, 1918, 2065, 2304, 3169, 3610, 3746 |
| BspQI | GCTCTTC | 1 cut(s) | 2939 |
| BspT107I | GGYRCC | 2 cut(s) | 1536, 1681 |
| BspTNI | GGTCTC | 4 cut(s) | 532, 2408, 2557, 2673 |
| BsrBI | CCGCTC | 1 cut(s) | 40 |
| BsrDI | GCAATG | 7 cut(s) | 1002, 1215, 1557, 2257, 3228, 3426, 3606 |
| BsrFI | RCCGGY | 2 cut(s) | 180, 882 |
| BsrGI | TGTACA | 2 cut(s) | 2328, 3507 |
| BssAI | RCCGGY | 2 cut(s) | 180, 882 |
| BssT1I | CCWWGG | 8 cut(s) | 9, 96, 588, 1209, 1369, 2982, 3008, 3157 |
| Bst2UI | CCWGG | 6 cut(s) | 265, 1076, 2359, 3264, 3529, 3685 |
| Bst4CI | ACNGT | 8 cut(s) | 765, 1276, 1629, 1984, 2884, 2993, 3417, 3507 |
| Bst6I | CTCTTC | 6 cut(s) | 1261, 2503, 2939, 3187, 3543, 3906 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3347 |
| BstAUI | TGTACA | 2 cut(s) | 2328, 3507 |
| BstDEI | CTNAG | 8 cut(s) | 220, 288, 323, 414, 793, 1114, 2675, 3134 |
| BstDSI | CCRYGG | 4 cut(s) | 9, 96, 588, 2746 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1152, 2641, 3027 |
| BstFNI | CGCG | 1 cut(s) | 809 |
| BstH2I | RGCGCY | 1 cut(s) | 3246 |
| BstHHI | GCGC | 3 cut(s) | 2250, 3127, 3245 |
| BstMAI | GTCTC | 6 cut(s) | 532, 2408, 2557, 2673, 3642, 3833 |
| BstNI | CCWGG | 6 cut(s) | 265, 1076, 2359, 3264, 3529, 3685 |
| BstNSI | RCATGY | 7 cut(s) | 452, 730, 1856, 2557, 2966, 3022, 3314 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2556 |
| BstSFI | CTRYAG | 5 cut(s) | 752, 1361, 2164, 2535, 2733 |
| BstSLI | GKGCMC | 2 cut(s) | 1684, 1863 |
| BstUI | CGCG | 1 cut(s) | 809 |
| BstV2I | GAAGAC | 1 cut(s) | 252 |
| BstX2I | RGATCY | 1 cut(s) | 1806 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 16, 90, 103 |
| BstYI | RGATCY | 1 cut(s) | 1806 |
| Bsu15I | ATCGAT | 1 cut(s) | 389 |
| Bsu36I | CCTNAGG | 1 cut(s) | 220 |
| BsuTUI | ATCGAT | 1 cut(s) | 389 |
| BtgI | CCRYGG | 4 cut(s) | 9, 96, 588, 2746 |
| BtsI | GCAGTG | 5 cut(s) | 931, 1501, 2259, 2567, 3208 |
| BveI | ACCTGC | 2 cut(s) | 2275, 3285 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1280, 1348, 2543, 3133 |
| CciI | TCATGA | 2 cut(s) | 622, 2425 |
| CfoI | GCGC | 3 cut(s) | 2250, 3127, 3245 |
| Cfr10I | RCCGGY | 2 cut(s) | 180, 882 |
| Cfr9I | CCCGGG | 1 cut(s) | 2655 |
| ClaI | ATCGAT | 1 cut(s) | 389 |
| CsiI | ACCWGGT | 1 cut(s) | 3527 |
| Csp6I | GTAC | 4 cut(s) | 1454, 1892, 2329, 3508 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1888, 1923 |
| CviQI | GTAC | 4 cut(s) | 1454, 1892, 2329, 3508 |
| DdeI | CTNAG | 8 cut(s) | 220, 288, 323, 414, 793, 1114, 2675, 3134 |
| DraI | TTTAAA | 2 cut(s) | 862, 2935 |
| DraIII | CACNNNGTG | 3 cut(s) | 1867, 3304, 3458 |
| EaeI | YGGCCR | 3 cut(s) | 654, 1212, 2254 |
| Eam1104I | CTCTTC | 6 cut(s) | 1261, 2503, 2939, 3187, 3543, 3906 |
| EarI | CTCTTC | 6 cut(s) | 1261, 2503, 2939, 3187, 3543, 3906 |
| EciI | GGCGGA | 3 cut(s) | 1783, 3044, 3498 |
| Eco130I | CCWWGG | 8 cut(s) | 9, 96, 588, 1209, 1369, 2982, 3008, 3157 |
| Eco147I | AGGCCT | 1 cut(s) | 225 |
| Eco24I | GRGCYC | 3 cut(s) | 83, 289, 3046 |
| Eco31I | GGTCTC | 4 cut(s) | 532, 2408, 2557, 2673 |
| Eco57I | CTGAAG | 3 cut(s) | 2037, 2084, 3906 |
| Eco81I | CCTNAGG | 1 cut(s) | 220 |
| Eco88I | CYCGRG | 4 cut(s) | 2316, 2655, 2939, 3557 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1152, 2641, 3027 |
| EcoO109I | RGGNCCY | 5 cut(s) | 1157, 1366, 1719, 2482, 2659 |
| EcoRI | GAATTC | 3 cut(s) | 643, 802, 1249 |
| EcoRII | CCWGG | 6 cut(s) | 263, 1074, 2357, 3262, 3527, 3683 |
| EcoT14I | CCWWGG | 8 cut(s) | 9, 96, 588, 1209, 1369, 2982, 3008, 3157 |
| EcoT22I | ATGCAT | 2 cut(s) | 454, 1483 |
| EcoT38I | GRGCYC | 3 cut(s) | 83, 289, 3046 |
| ErhI | CCWWGG | 8 cut(s) | 9, 96, 588, 1209, 1369, 2982, 3008, 3157 |
| Esp3I | CGTCTC | 1 cut(s) | 3833 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2482, 2514 |
| FaqI | GGGAC | 6 cut(s) | 1190, 1359, 1997, 2495, 2672, 3403 |
| FauI | CCCGC | 2 cut(s) | 36, 2285 |
| FokI | GGATG | 9 cut(s) | 518, 775, 827, 1013, 1328, 1490, 1600, 1848, 2638 |
| FriOI | GRGCYC | 3 cut(s) | 83, 289, 3046 |
| FspI | TGCGCA | 2 cut(s) | 2249, 3126 |
| GlaI | GCGC | 3 cut(s) | 2249, 3126, 3244 |
| GsaI | CCCAGC | 1 cut(s) | 2976 |
| GsuI | CTGGAG | 2 cut(s) | 56, 2565 |
| HaeII | RGCGCY | 1 cut(s) | 3246 |
| HapII | CCGG | 6 cut(s) | 181, 883, 1599, 2272, 2656, 3812 |
| HhaI | GCGC | 3 cut(s) | 2250, 3127, 3245 |
| Hin6I | GCGC | 3 cut(s) | 2248, 3125, 3243 |
| HinP1I | GCGC | 3 cut(s) | 2248, 3125, 3243 |
| HincII | GTYRAC | 1 cut(s) | 1665 |
| HindII | GTYRAC | 1 cut(s) | 1665 |
| HindIII | AAGCTT | 4 cut(s) | 297, 1551, 1874, 3768 |
| HpaII | CCGG | 6 cut(s) | 181, 883, 1599, 2272, 2656, 3812 |
| HphI | GGTGA | 8 cut(s) | 70, 371, 1538, 1632, 2108, 3217, 3625, 3811 |
| Hpy166II | GTNNAC | 8 cut(s) | 32, 350, 718, 1665, 1861, 2113, 3316, 3802 |
| Hpy8I | GTNNAC | 8 cut(s) | 32, 350, 718, 1665, 1861, 2113, 3316, 3802 |
| HpyCH4III | ACNGT | 8 cut(s) | 765, 1276, 1629, 1984, 2884, 2993, 3417, 3507 |
| HpyCH4IV | ACGT | 3 cut(s) | 1141, 3300, 3842 |
| HpyF3I | CTNAG | 8 cut(s) | 220, 288, 323, 414, 793, 1114, 2675, 3134 |
| HpySE526I | ACGT | 3 cut(s) | 1141, 3300, 3842 |
| HspAI | GCGC | 3 cut(s) | 2248, 3125, 3243 |
| KflI | GGGWCCC | 1 cut(s) | 2482 |
| LguI | GCTCTTC | 1 cut(s) | 2939 |
| LmnI | GCTCC | 7 cut(s) | 37, 52, 2204, 2534, 3171, 3696, 3814 |
| MabI | ACCWGGT | 1 cut(s) | 3527 |
| MaeII | ACGT | 3 cut(s) | 1141, 3300, 3842 |
| MaeIII | GTNAC | 9 cut(s) | 58, 950, 1526, 1919, 2078, 2492, 2723, 2740, 3531 |
| MbiI | CCGCTC | 1 cut(s) | 40 |
| MfeI | CAATTG | 1 cut(s) | 782 |
| MflI | RGATCY | 1 cut(s) | 1806 |
| MhlI | GDGCHC | 6 cut(s) | 83, 289, 1684, 1863, 1954, 3046 |
| MlsI | TGGCCA | 3 cut(s) | 656, 1214, 2256 |
| MluNI | TGGCCA | 3 cut(s) | 656, 1214, 2256 |
| MlyI | GAGTC | 2 cut(s) | 300, 2111 |
| MmeI | TCCRAC | 5 cut(s) | 196, 2191, 3269, 3705, 3939 |
| Mox20I | TGGCCA | 3 cut(s) | 656, 1214, 2256 |
| Mph1103I | ATGCAT | 2 cut(s) | 454, 1483 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2598 |
| MscI | TGGCCA | 3 cut(s) | 656, 1214, 2256 |
| MslI | CAYNNNNRTG | 4 cut(s) | 14, 101, 662, 3882 |
| Msp20I | TGGCCA | 3 cut(s) | 656, 1214, 2256 |
| MspA1I | CMGCKG | 3 cut(s) | 2292, 3060, 3493 |
| MspI | CCGG | 6 cut(s) | 181, 883, 1599, 2272, 2656, 3812 |
| MunI | CAATTG | 1 cut(s) | 782 |
| Mva1269I | GAATGC | 1 cut(s) | 997 |
| MvaI | CCWGG | 6 cut(s) | 265, 1076, 2359, 3264, 3529, 3685 |
| MvnI | CGCG | 1 cut(s) | 809 |
| NciI | CCSGG | 4 cut(s) | 1599, 2272, 2656, 2657 |
| NcoI | CCATGG | 3 cut(s) | 9, 96, 588 |
| NheI | GCTAGC | 1 cut(s) | 3374 |
| NmeAIII | GCCGAG | 1 cut(s) | 3388 |
| NmuCI | GTSAC | 4 cut(s) | 58, 950, 1526, 1919 |
| NsbI | TGCGCA | 2 cut(s) | 2249, 3126 |
| NsiI | ATGCAT | 2 cut(s) | 454, 1483 |
| NspI | RCATGY | 7 cut(s) | 452, 730, 1856, 2557, 2966, 3022, 3314 |
| PaeI | GCATGC | 1 cut(s) | 3022 |
| PaeR7I | CTCGAG | 2 cut(s) | 2316, 2939 |
| PagI | TCATGA | 2 cut(s) | 622, 2425 |
| PaqCI | CACCTGC | 1 cut(s) | 2275 |
| PceI | AGGCCT | 1 cut(s) | 225 |
| PciI | ACATGT | 2 cut(s) | 1852, 2553 |
| PciSI | GCTCTTC | 1 cut(s) | 2939 |
| PctI | GAATGC | 1 cut(s) | 997 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2598 |
| PflFI | GACNNNGTC | 1 cut(s) | 1774 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 356, 963, 2870, 3636 |
| PleI | GAGTC | 2 cut(s) | 300, 2110 |
| PpsI | GAGTC | 2 cut(s) | 300, 2110 |
| PpuMI | RGGWCCY | 4 cut(s) | 1366, 1719, 2482, 2659 |
| PscI | ACATGT | 2 cut(s) | 1852, 2553 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2556 |
| Psp5II | RGGWCCY | 4 cut(s) | 1366, 1719, 2482, 2659 |
| Psp6I | CCWGG | 6 cut(s) | 263, 1074, 2357, 3262, 3527, 3683 |
| PspFI | CCCAGC | 1 cut(s) | 2972 |
| PspGI | CCWGG | 6 cut(s) | 263, 1074, 2357, 3262, 3527, 3683 |
| PspPPI | RGGWCCY | 4 cut(s) | 1366, 1719, 2482, 2659 |
| PstI | CTGCAG | 3 cut(s) | 756, 2539, 2737 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1280, 1348, 2543, 3133 |
| PsuI | RGATCY | 1 cut(s) | 1806 |
| PsyI | GACNNNGTC | 1 cut(s) | 1774 |
| PvuII | CAGCTG | 1 cut(s) | 3493 |
| RsaI | GTAC | 4 cut(s) | 1455, 1893, 2330, 3509 |
| RsaNI | GTAC | 4 cut(s) | 1454, 1892, 2329, 3508 |
| RseI | CAYNNNNRTG | 4 cut(s) | 14, 101, 662, 3882 |
| SapI | GCTCTTC | 1 cut(s) | 2939 |
| SchI | GAGTC | 2 cut(s) | 300, 2111 |
| SduI | GDGCHC | 6 cut(s) | 83, 289, 1684, 1863, 1954, 3046 |
| SexAI | ACCWGGT | 1 cut(s) | 3527 |
| SfcI | CTRYAG | 5 cut(s) | 752, 1361, 2164, 2535, 2733 |
| Sfr274I | CTCGAG | 2 cut(s) | 2316, 2939 |
| SlaI | CTCGAG | 2 cut(s) | 2316, 2939 |
| SmaI | CCCGGG | 1 cut(s) | 2657 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 14, 101, 662, 3882 |
| SmlI | CTYRAG | 6 cut(s) | 1172, 2177, 2316, 2612, 2939, 3673 |
| SmoI | CTYRAG | 6 cut(s) | 1172, 2177, 2316, 2612, 2939, 3673 |
| SphI | GCATGC | 1 cut(s) | 3022 |
| SseBI | AGGCCT | 1 cut(s) | 225 |
| SspI | AATATT | 2 cut(s) | 1426, 2445 |
| StuI | AGGCCT | 1 cut(s) | 225 |
| StyI | CCWWGG | 8 cut(s) | 9, 96, 588, 1209, 1369, 2982, 3008, 3157 |
| TaaI | ACNGT | 8 cut(s) | 765, 1276, 1629, 1984, 2884, 2993, 3417, 3507 |
| TaiI | ACGT | 3 cut(s) | 1144, 3303, 3845 |
| TaqI | TCGA | 9 cut(s) | 389, 438, 532, 709, 1123, 1575, 2317, 2940, 2952 |
| TaqII | GACCGA | 1 cut(s) | 556 |
| TatI | WGTACW | 3 cut(s) | 1453, 2328, 3507 |
| TauI | GCSGC | 4 cut(s) | 43, 1433, 1799, 3060 |
| TseFI | GTSAC | 4 cut(s) | 58, 950, 1526, 1919 |
| Tsp45I | GTSAC | 4 cut(s) | 58, 950, 1526, 1919 |
| TspGWI | ACGGA | 7 cut(s) | 643, 959, 1963, 2098, 2207, 3244, 3679 |
| TspMI | CCCGGG | 1 cut(s) | 2655 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1774 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 356, 963, 2870, 3636 |
| VneI | GTGCAC | 1 cut(s) | 1859 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1152, 2641, 3027 |
| XapI | RAATTY | 5 cut(s) | 643, 802, 1050, 1249, 2159 |
| XbaI | TCTAGA | 1 cut(s) | 202 |
| XceI | RCATGY | 7 cut(s) | 452, 730, 1856, 2557, 2966, 3022, 3314 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 664 |
| XhoI | CTCGAG | 2 cut(s) | 2316, 2939 |
| XmaI | CCCGGG | 1 cut(s) | 2655 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2598 |
| Zsp2I | ATGCAT | 2 cut(s) | 454, 1483 |