mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 |
| malus_domestica | MD04G1179600.v1.1 MD12G1194700.v1.1 |
| prunus_persica | Prupe.6G299600_v2.0.a1 Prupe.6G299600_v2.0.a1 |
| pyrus_communis | pycom04g15860 pycom12g18080 pycom12g18090 |
| rosa_chinensis | RchiOBHm_Chr3g0459591 |
| rosa_laevigata | RLG00000025076 |
| rosa_multiflora | Rmu_co8219898.1_g000001 Rmu_sc0023410.1_g000001 Rmu_sc0023706.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00420150 |
| rosa_rugosa | Rorug03G0036600 |
| rosa_samantha | Rh3AG095600 Rh3BG097500 Rh3CG099900 Rh3DG099200 |
| rosa_wichuraiana | Rw0G013840 Rw0G017590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1691 |
| AarI | CACCTGC | 1 cut(s) | 1499 |
| Acc16I | TGCGCA | 1 cut(s) | 2280 |
| Acc36I | ACCTGC | 3 cut(s) | 1499, 2680, 3593 |
| AccB1I | GGYRCC | 1 cut(s) | 1524 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 106, 2498 |
| AccBSI | CCGCTC | 1 cut(s) | 22 |
| AccII | CGCG | 1 cut(s) | 3559 |
| AclWI | GGATC | 9 cut(s) | 910, 1130, 1789, 1990, 2037, 2050, 3135, 3148, 3725 |
| AcoI | YGGCCR | 2 cut(s) | 645, 3834 |
| AcuI | CTGAAG | 1 cut(s) | 380 |
| AdeI | CACNNNGTG | 2 cut(s) | 2030, 3437 |
| AfaI | GTAC | 4 cut(s) | 1155, 1881, 2315, 3488 |
| AflIII | ACRYGT | 2 cut(s) | 1840, 2559 |
| AgeI | ACCGGT | 1 cut(s) | 3277 |
| AhlI | ACTAGT | 1 cut(s) | 3925 |
| AjiI | CACGTC | 3 cut(s) | 1172, 2560, 3795 |
| AjnI | CCWGG | 9 cut(s) | 254, 1065, 1268, 1585, 2255, 2342, 2987, 3241, 3506 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 626, 658, 3519, 3551, 3606, 3638 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2391, 2423 |
| Alw21I | GWGCWC | 2 cut(s) | 1672, 3649 |
| Alw44I | GTGCAC | 1 cut(s) | 3645 |
| AlwI | GGATC | 9 cut(s) | 910, 1130, 1789, 1990, 2037, 2050, 3135, 3148, 3725 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1400, 2300, 2539 |
| Ama87I | CYCGRG | 3 cut(s) | 1163, 2585, 2628 |
| ApaLI | GTGCAC | 1 cut(s) | 3645 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2054, 2086 |
| AseI | ATTAAT | 2 cut(s) | 1023, 3773 |
| AsiGI | ACCGGT | 1 cut(s) | 3277 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2571, 2937, 3498 |
| AspLEI | GCGC | 2 cut(s) | 873, 2281 |
| AspS9I | GGNCC | 9 cut(s) | 84, 97, 338, 941, 1148, 1898, 2035, 3475, 3871 |
| AsuNHI | GCTAGC | 3 cut(s) | 1070, 2881, 2956 |
| AvaI | CYCGRG | 3 cut(s) | 1163, 2585, 2628 |
| AvaII | GGWCC | 5 cut(s) | 338, 941, 1898, 2035, 3475 |
| BaeGI | GKGCMC | 5 cut(s) | 120, 360, 1385, 3226, 3649 |
| BalI | TGGCCA | 1 cut(s) | 647 |
| BamHI | GGATCC | 2 cut(s) | 2042, 3140 |
| BanI | GGYRCC | 1 cut(s) | 1524 |
| BanII | GRGCYC | 2 cut(s) | 2470, 3025 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1137, 1169 |
| BauI | CACGAG | 1 cut(s) | 2718 |
| BbsI | GAAGAC | 1 cut(s) | 518 |
| Bbv12I | GWGCWC | 2 cut(s) | 1672, 3649 |
| BccI | CCATC | 7 cut(s) | 347, 560, 1283, 1818, 2479, 2500, 3234 |
| BceAI | ACGGC | 1 cut(s) | 287 |
| BciT130I | CCWGG | 9 cut(s) | 256, 1067, 1270, 1587, 2257, 2344, 2989, 3243, 3508 |
| BclI | TGATCA | 1 cut(s) | 1915 |
| BcuI | ACTAGT | 1 cut(s) | 3925 |
| BfoI | RGCGCY | 1 cut(s) | 874 |
| BfuAI | ACCTGC | 3 cut(s) | 1499, 2680, 3593 |
| Bme1390I | CCNGG | 9 cut(s) | 256, 1067, 1270, 1587, 2257, 2344, 2989, 3243, 3508 |
| Bme18I | GGWCC | 5 cut(s) | 338, 941, 1898, 2035, 3475 |
| BmeT110I | CYCGRG | 3 cut(s) | 1163, 2585, 2628 |
| BmgBI | CACGTC | 3 cut(s) | 1172, 2560, 3795 |
| BmgT120I | GGNCC | 9 cut(s) | 84, 97, 338, 941, 1148, 1898, 2035, 3475, 3871 |
| BmiI | GGNNCC | 5 cut(s) | 960, 1526, 2044, 2503, 3142 |
| BmrFI | CCNGG | 9 cut(s) | 256, 1067, 1270, 1587, 2257, 2344, 2989, 3243, 3508 |
| BmtI | GCTAGC | 3 cut(s) | 1074, 2885, 2960 |
| BoxI | GACNNNNGTC | 1 cut(s) | 201 |
| BpiI | GAAGAC | 1 cut(s) | 518 |
| BpmI | CTGGAG | 2 cut(s) | 333, 2377 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1212 |
| BpuEI | CTTGAG | 4 cut(s) | 326, 2183, 2668, 2939 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2325, 2529 |
| BsaI | GGTCTC | 5 cut(s) | 221, 282, 520, 2393, 2646 |
| BsaWI | WCCGGW | 1 cut(s) | 3277 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2178, 2181, 2208, 2211, 3245, 3275 |
| Bse118I | RCCGGY | 2 cut(s) | 3277, 3836 |
| Bse1I | ACTGG | 9 cut(s) | 450, 859, 1900, 2394, 2450, 2647, 2735, 3477, 3663 |
| Bse3DI | GCAATG | 4 cut(s) | 1545, 1982, 2172, 3585 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2325, 2529 |
| BseBI | CCWGG | 9 cut(s) | 256, 1067, 1270, 1587, 2257, 2344, 2989, 3243, 3508 |
| BseGI | GGATG | 9 cut(s) | 502, 779, 1231, 1471, 1601, 1808, 1829, 2530, 3226 |
| BseJI | GATNNNNATC | 2 cut(s) | 2325, 2529 |
| BseMI | GCAATG | 4 cut(s) | 1545, 1982, 2172, 3585 |
| BseMII | CTCAG | 7 cut(s) | 396, 798, 920, 1119, 1828, 1922, 3815 |
| BseNI | ACTGG | 9 cut(s) | 450, 859, 1900, 2394, 2450, 2647, 2735, 3477, 3663 |
| BseRI | GAGGAG | 8 cut(s) | 80, 209, 216, 236, 1787, 2199, 2202, 3118 |
| BseSI | GKGCMC | 5 cut(s) | 120, 360, 1385, 3226, 3649 |
| BseYI | CCCAGC | 5 cut(s) | 119, 658, 1711, 2951, 3105 |
| BsgI | GTGCAG | 3 cut(s) | 1437, 1868, 2472 |
| Bsh1236I | CGCG | 1 cut(s) | 3559 |
| Bsh1285I | CGRYCG | 1 cut(s) | 384 |
| BshNI | GGYRCC | 1 cut(s) | 1524 |
| BshTI | ACCGGT | 1 cut(s) | 3277 |
| BsiEI | CGRYCG | 1 cut(s) | 384 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1672, 3649 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1163, 2585, 2628 |
| BsiSI | CCGG | 3 cut(s) | 163, 3278, 3837 |
| BslFI | GGGAC | 3 cut(s) | 1181, 2570, 2645 |
| BsmFI | GGGAC | 3 cut(s) | 1181, 2570, 2645 |
| Bso31I | GGTCTC | 5 cut(s) | 221, 282, 520, 2393, 2646 |
| BsoBI | CYCGRG | 3 cut(s) | 1163, 2585, 2628 |
| Bsp1286I | GDGCHC | 8 cut(s) | 120, 360, 1385, 1672, 2470, 3025, 3226, 3649 |
| Bsp1407I | TGTACA | 1 cut(s) | 2313 |
| Bsp19I | CCATGG | 3 cut(s) | 87, 1646, 2611 |
| BspCNI | CTCAG | 7 cut(s) | 397, 797, 919, 1118, 1827, 1923, 3816 |
| BspFNI | CGCG | 1 cut(s) | 3559 |
| BspHI | TCATGA | 2 cut(s) | 1704, 2410 |
| BspLI | GGNNCC | 5 cut(s) | 960, 1526, 2044, 2503, 3142 |
| BspMAI | CTGCAG | 5 cut(s) | 747, 802, 2710, 3269, 3922 |
| BspMI | ACCTGC | 3 cut(s) | 1499, 2680, 3593 |
| BspOI | GCTAGC | 3 cut(s) | 1074, 2885, 2960 |
| BspPI | GGATC | 9 cut(s) | 910, 1130, 1789, 1990, 2037, 2050, 3135, 3148, 3725 |
| BspQI | GCTCTTC | 2 cut(s) | 399, 3652 |
| BspT107I | GGYRCC | 1 cut(s) | 1524 |
| BspTNI | GGTCTC | 5 cut(s) | 221, 282, 520, 2393, 2646 |
| BsrBI | CCGCTC | 1 cut(s) | 22 |
| BsrDI | GCAATG | 4 cut(s) | 1545, 1982, 2172, 3585 |
| BsrFI | RCCGGY | 2 cut(s) | 3277, 3836 |
| BsrGI | TGTACA | 1 cut(s) | 2313 |
| BsrI | ACTGG | 9 cut(s) | 450, 859, 1900, 2394, 2450, 2647, 2735, 3477, 3663 |
| BssAI | RCCGGY | 2 cut(s) | 3277, 3836 |
| BssSI | CACGAG | 1 cut(s) | 2718 |
| BssT1I | CCWWGG | 8 cut(s) | 87, 1200, 1357, 1646, 2038, 2552, 2611, 2961 |
| Bst2BI | CACGAG | 1 cut(s) | 2718 |
| Bst2UI | CCWGG | 9 cut(s) | 256, 1067, 1270, 1587, 2257, 2344, 2989, 3243, 3508 |
| Bst4CI | ACNGT | 6 cut(s) | 756, 1960, 1969, 2863, 2972, 3491 |
| Bst6I | CTCTTC | 5 cut(s) | 234, 399, 1722, 3652, 3885 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1415, 3326 |
| BstAUI | TGTACA | 1 cut(s) | 2313 |
| BstDSI | CCRYGG | 3 cut(s) | 87, 1646, 2611 |
| BstEII | GGTNACC | 1 cut(s) | 145 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1143 |
| BstF5I | GGATG | 9 cut(s) | 502, 779, 1231, 1471, 1601, 1808, 1829, 2530, 3226 |
| BstFNI | CGCG | 1 cut(s) | 3559 |
| BstH2I | RGCGCY | 1 cut(s) | 874 |
| BstHHI | GCGC | 2 cut(s) | 873, 2281 |
| BstMCI | CGRYCG | 1 cut(s) | 384 |
| BstNI | CCWGG | 9 cut(s) | 256, 1067, 1270, 1587, 2257, 2344, 2989, 3243, 3508 |
| BstNSI | RCATGY | 6 cut(s) | 443, 1034, 1844, 3001, 3444, 3645 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 201 |
| BstPI | GGTNACC | 1 cut(s) | 145 |
| BstSCI | CCNGG | 9 cut(s) | 254, 1065, 1268, 1585, 2255, 2342, 2987, 3241, 3506 |
| BstSLI | GKGCMC | 5 cut(s) | 120, 360, 1385, 3226, 3649 |
| BstUI | CGCG | 1 cut(s) | 3559 |
| BstV2I | GAAGAC | 1 cut(s) | 518 |
| BstX2I | RGATCY | 4 cut(s) | 902, 1794, 2042, 3140 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 94, 566, 881, 1276 |
| BstYI | RGATCY | 4 cut(s) | 902, 1794, 2042, 3140 |
| BtgI | CCRYGG | 3 cut(s) | 87, 1646, 2611 |
| BtrI | CACGTC | 3 cut(s) | 1172, 2560, 3795 |
| BtsCI | GGATG | 9 cut(s) | 502, 779, 1231, 1471, 1601, 1808, 1829, 2530, 3226 |
| BtsI | GCAGTG | 3 cut(s) | 120, 807, 2281 |
| BveI | ACCTGC | 3 cut(s) | 1499, 2680, 3593 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1400, 2300, 2539 |
| CciI | TCATGA | 2 cut(s) | 1704, 2410 |
| CfoI | GCGC | 2 cut(s) | 873, 2281 |
| Cfr10I | RCCGGY | 2 cut(s) | 3277, 3836 |
| Cfr13I | GGNCC | 9 cut(s) | 84, 97, 338, 941, 1148, 1898, 2035, 3475, 3871 |
| CsiI | ACCWGGT | 1 cut(s) | 3506 |
| Csp6I | GTAC | 4 cut(s) | 1154, 1880, 2314, 3487 |
| CspAI | ACCGGT | 1 cut(s) | 3277 |
| CviQI | GTAC | 4 cut(s) | 1154, 1880, 2314, 3487 |
| DraI | TTTAAA | 1 cut(s) | 2914 |
| DraIII | CACNNNGTG | 2 cut(s) | 2030, 3437 |
| EaeI | YGGCCR | 2 cut(s) | 645, 3834 |
| Eam1104I | CTCTTC | 5 cut(s) | 234, 399, 1722, 3652, 3885 |
| EarI | CTCTTC | 5 cut(s) | 234, 399, 1722, 3652, 3885 |
| EciI | GGCGGA | 1 cut(s) | 3892 |
| Eco130I | CCWWGG | 8 cut(s) | 87, 1200, 1357, 1646, 2038, 2552, 2611, 2961 |
| Eco24I | GRGCYC | 2 cut(s) | 2470, 3025 |
| Eco31I | GGTCTC | 5 cut(s) | 221, 282, 520, 2393, 2646 |
| Eco47I | GGWCC | 5 cut(s) | 338, 941, 1898, 2035, 3475 |
| Eco57I | CTGAAG | 1 cut(s) | 380 |
| Eco88I | CYCGRG | 3 cut(s) | 1163, 2585, 2628 |
| Eco91I | GGTNACC | 1 cut(s) | 145 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1143 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1148, 2035 |
| EcoO65I | GGTNACC | 1 cut(s) | 145 |
| EcoRI | GAATTC | 4 cut(s) | 634, 793, 1240, 3376 |
| EcoRII | CCWGG | 9 cut(s) | 254, 1065, 1268, 1585, 2255, 2342, 2987, 3241, 3506 |
| EcoT14I | CCWWGG | 8 cut(s) | 87, 1200, 1357, 1646, 2038, 2552, 2611, 2961 |
| EcoT22I | ATGCAT | 2 cut(s) | 328, 1471 |
| EcoT38I | GRGCYC | 2 cut(s) | 2470, 3025 |
| ErhI | CCWWGG | 8 cut(s) | 87, 1200, 1357, 1646, 2038, 2552, 2611, 2961 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 523, 555, 2796, 2828 |
| FaqI | GGGAC | 3 cut(s) | 1181, 2570, 2645 |
| FauI | CCCGC | 1 cut(s) | 18 |
| FauNDI | CATATG | 2 cut(s) | 1920, 3681 |
| FbaI | TGATCA | 1 cut(s) | 1915 |
| FokI | GGATG | 9 cut(s) | 509, 766, 1238, 1478, 1588, 1795, 1836, 2537, 3213 |
| FriOI | GRGCYC | 2 cut(s) | 2470, 3025 |
| FspAI | RTGCGCAY | 1 cut(s) | 2280 |
| FspI | TGCGCA | 1 cut(s) | 2280 |
| GlaI | GCGC | 2 cut(s) | 872, 2280 |
| GsaI | CCCAGC | 5 cut(s) | 123, 662, 1715, 2955, 3109 |
| GsuI | CTGGAG | 2 cut(s) | 333, 2377 |
| HaeII | RGCGCY | 1 cut(s) | 874 |
| HapII | CCGG | 3 cut(s) | 163, 3278, 3837 |
| HhaI | GCGC | 2 cut(s) | 873, 2281 |
| Hin6I | GCGC | 2 cut(s) | 871, 2279 |
| HinP1I | GCGC | 2 cut(s) | 871, 2279 |
| HincII | GTYRAC | 1 cut(s) | 1653 |
| HindII | GTYRAC | 1 cut(s) | 1653 |
| HindIII | AAGCTT | 6 cut(s) | 288, 684, 1539, 1862, 1950, 3533 |
| HpaII | CCGG | 3 cut(s) | 163, 3278, 3837 |
| Hpy166II | GTNNAC | 5 cut(s) | 709, 1653, 2098, 3647, 3781 |
| Hpy8I | GTNNAC | 5 cut(s) | 709, 1653, 2098, 3647, 3781 |
| Hpy99I | CGWCG | 1 cut(s) | 3796 |
| HpyCH4III | ACNGT | 6 cut(s) | 756, 1960, 1969, 2863, 2972, 3491 |
| HpyCH4IV | ACGT | 4 cut(s) | 1132, 1171, 2559, 3794 |
| HpySE526I | ACGT | 4 cut(s) | 1132, 1171, 2559, 3794 |
| HspAI | GCGC | 2 cut(s) | 871, 2279 |
| Ksp22I | TGATCA | 1 cut(s) | 1915 |
| LguI | GCTCTTC | 2 cut(s) | 399, 3652 |
| MabI | ACCWGGT | 1 cut(s) | 3506 |
| MaeII | ACGT | 4 cut(s) | 1132, 1171, 2559, 3794 |
| MbiI | CCGCTC | 1 cut(s) | 22 |
| MboII | GAAGA | 9 cut(s) | 221, 386, 523, 1335, 1739, 2120, 2123, 3669, 3872 |
| MfeI | CAATTG | 4 cut(s) | 342, 1206, 3003, 3609 |
| MflI | RGATCY | 4 cut(s) | 902, 1794, 2042, 3140 |
| MhlI | GDGCHC | 8 cut(s) | 120, 360, 1385, 1672, 2470, 3025, 3226, 3649 |
| MlsI | TGGCCA | 1 cut(s) | 647 |
| MluNI | TGGCCA | 1 cut(s) | 647 |
| MlyI | GAGTC | 5 cut(s) | 849, 1175, 2096, 2801, 3356 |
| MmeI | TCCRAC | 4 cut(s) | 2544, 3493, 3527, 3815 |
| Mox20I | TGGCCA | 1 cut(s) | 647 |
| Mph1103I | ATGCAT | 2 cut(s) | 328, 1471 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2571, 2937, 3498 |
| MscI | TGGCCA | 1 cut(s) | 647 |
| MslI | CAYNNNNRTG | 5 cut(s) | 564, 653, 884, 2286, 3861 |
| Msp20I | TGGCCA | 1 cut(s) | 647 |
| MspA1I | CMGCKG | 3 cut(s) | 1485, 1787, 3039 |
| MspI | CCGG | 3 cut(s) | 163, 3278, 3837 |
| MspR9I | CCNGG | 9 cut(s) | 256, 1067, 1270, 1587, 2257, 2344, 2989, 3243, 3508 |
| MunI | CAATTG | 4 cut(s) | 342, 1206, 3003, 3609 |
| MvaI | CCWGG | 9 cut(s) | 256, 1067, 1270, 1587, 2257, 2344, 2989, 3243, 3508 |
| MvnI | CGCG | 1 cut(s) | 3559 |
| NcoI | CCATGG | 3 cut(s) | 87, 1646, 2611 |
| NdeI | CATATG | 2 cut(s) | 1920, 3681 |
| NheI | GCTAGC | 3 cut(s) | 1070, 2881, 2956 |
| NlaIV | GGNNCC | 5 cut(s) | 960, 1526, 2044, 2503, 3142 |
| NmuCI | GTSAC | 9 cut(s) | 40, 145, 554, 1167, 1514, 1641, 1764, 1904, 2713 |
| NsbI | TGCGCA | 1 cut(s) | 2280 |
| NsiI | ATGCAT | 2 cut(s) | 328, 1471 |
| NspI | RCATGY | 6 cut(s) | 443, 1034, 1844, 3001, 3444, 3645 |
| PaeI | GCATGC | 1 cut(s) | 3001 |
| PaeR7I | CTCGAG | 2 cut(s) | 1163, 2585 |
| PagI | TCATGA | 2 cut(s) | 1704, 2410 |
| PaqCI | CACCTGC | 1 cut(s) | 1499 |
| PciI | ACATGT | 1 cut(s) | 1840 |
| PciSI | GCTCTTC | 2 cut(s) | 399, 3652 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 50 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2571, 2937, 3498 |
| PflFI | GACNNNGTC | 1 cut(s) | 1902 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 106, 2498 |
| PfoI | TCCNGGA | 1 cut(s) | 1268 |
| PinAI | ACCGGT | 1 cut(s) | 3277 |
| PleI | GAGTC | 5 cut(s) | 848, 1174, 2095, 2800, 3356 |
| PpsI | GAGTC | 5 cut(s) | 848, 1174, 2095, 2800, 3356 |
| PpuMI | RGGWCCY | 1 cut(s) | 2035 |
| PscI | ACATGT | 1 cut(s) | 1840 |
| PshAI | GACNNNNGTC | 1 cut(s) | 201 |
| PshBI | ATTAAT | 2 cut(s) | 1023, 3773 |
| PsiI | TTATAA | 1 cut(s) | 1691 |
| Psp5II | RGGWCCY | 1 cut(s) | 2035 |
| Psp6I | CCWGG | 9 cut(s) | 254, 1065, 1268, 1585, 2255, 2342, 2987, 3241, 3506 |
| PspEI | GGTNACC | 1 cut(s) | 145 |
| PspFI | CCCAGC | 5 cut(s) | 119, 658, 1711, 2951, 3105 |
| PspGI | CCWGG | 9 cut(s) | 254, 1065, 1268, 1585, 2255, 2342, 2987, 3241, 3506 |
| PspN4I | GGNNCC | 5 cut(s) | 960, 1526, 2044, 2503, 3142 |
| PspPI | GGNCC | 9 cut(s) | 84, 97, 338, 941, 1148, 1898, 2035, 3475, 3871 |
| PspPPI | RGGWCCY | 1 cut(s) | 2035 |
| PstI | CTGCAG | 5 cut(s) | 747, 802, 2710, 3269, 3922 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1400, 2300, 2539 |
| PsuI | RGATCY | 4 cut(s) | 902, 1794, 2042, 3140 |
| PsyI | GACNNNGTC | 1 cut(s) | 1902 |
| PvuII | CAGCTG | 2 cut(s) | 1485, 1787 |
| RsaI | GTAC | 4 cut(s) | 1155, 1881, 2315, 3488 |
| RsaNI | GTAC | 4 cut(s) | 1154, 1880, 2314, 3487 |
| RseI | CAYNNNNRTG | 5 cut(s) | 564, 653, 884, 2286, 3861 |
| SapI | GCTCTTC | 2 cut(s) | 399, 3652 |
| Sau96I | GGNCC | 9 cut(s) | 84, 97, 338, 941, 1148, 1898, 2035, 3475, 3871 |
| SbfI | CCTGCAGG | 1 cut(s) | 3269 |
| SchI | GAGTC | 5 cut(s) | 849, 1175, 2096, 2801, 3356 |
| ScrFI | CCNGG | 9 cut(s) | 256, 1067, 1270, 1587, 2257, 2344, 2989, 3243, 3508 |
| SdaI | CCTGCAGG | 1 cut(s) | 3269 |
| SduI | GDGCHC | 8 cut(s) | 120, 360, 1385, 1672, 2470, 3025, 3226, 3649 |
| SexAI | ACCWGGT | 1 cut(s) | 3506 |
| Sfr274I | CTCGAG | 2 cut(s) | 1163, 2585 |
| SinI | GGWCC | 5 cut(s) | 338, 941, 1898, 2035, 3475 |
| SlaI | CTCGAG | 2 cut(s) | 1163, 2585 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 564, 653, 884, 2286, 3861 |
| SmlI | CTYRAG | 6 cut(s) | 305, 1163, 2162, 2585, 2647, 2918 |
| SmoI | CTYRAG | 6 cut(s) | 305, 1163, 2162, 2585, 2647, 2918 |
| SpeI | ACTAGT | 1 cut(s) | 3925 |
| SphI | GCATGC | 1 cut(s) | 3001 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 3269 |
| StyD4I | CCNGG | 9 cut(s) | 254, 1065, 1268, 1585, 2255, 2342, 2987, 3241, 3506 |
| StyI | CCWWGG | 8 cut(s) | 87, 1200, 1357, 1646, 2038, 2552, 2611, 2961 |
| TaaI | ACNGT | 6 cut(s) | 756, 1960, 1969, 2863, 2972, 3491 |
| TaiI | ACGT | 4 cut(s) | 1135, 1174, 2562, 3797 |
| TaqI | TCGA | 8 cut(s) | 12, 195, 384, 520, 1164, 1563, 2586, 2790 |
| TaqII | GACCGA | 1 cut(s) | 370 |
| TatI | WGTACW | 1 cut(s) | 2313 |
| TauI | GCSGC | 5 cut(s) | 25, 53, 319, 3039, 3428 |
| TseFI | GTSAC | 9 cut(s) | 40, 145, 554, 1167, 1514, 1641, 1764, 1904, 2713 |
| Tsp45I | GTSAC | 9 cut(s) | 40, 145, 554, 1167, 1514, 1641, 1764, 1904, 2713 |
| TspGWI | ACGGA | 5 cut(s) | 59, 1008, 1299, 2083, 3541 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1902 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 106, 2498 |
| VneI | GTGCAC | 1 cut(s) | 3645 |
| VpaK11BI | GGWCC | 5 cut(s) | 338, 941, 1898, 2035, 3475 |
| VspI | ATTAAT | 2 cut(s) | 1023, 3773 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1143 |
| XbaI | TCTAGA | 1 cut(s) | 3653 |
| XceI | RCATGY | 6 cut(s) | 443, 1034, 1844, 3001, 3444, 3645 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 127, 655 |
| XhoI | CTCGAG | 2 cut(s) | 1163, 2585 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2571, 2937, 3498 |
| Zsp2I | ATGCAT | 2 cut(s) | 328, 1471 |