Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0006938

Physical Location & Seq

Genomic Coordinates Forward (+)

20357813 .. 20360039

Gene Structure 2227 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g18090.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGGTGATGAGTCCTCCATTTACATGGTCTTTTCTTTGGCATTTCTTTTTCTACTTCGTCTATGGAAATTTTATAGACCACCTCTTGAGCAATACATTACGGACAGAGGAGGACCAGTTGGAGGTGTGCTGACGTTGGAGTATCTTTTGTTATTGCGCAATGGCCACATTGCACCTGCCGGGGATGAGACAAACGGCAGTGGGGATCAGCTTGAATCATCACCTGTGGGACCTATGTGCATTGATTCTTATCCAAAATTACAAGCCTGGTACCGTCAAGACAGATCTTGTATCGCTTCAACACTTTCCAGTCTATCTAGTGGAAATCCTGTCCATGAAGTTGCTAATAAGATATTAAGTATGATTTACTATAAAATAACTAGAGTTGGGGCCCCACCAAGTAACTCTTCTGGACCATCAAGCGCCAGTATTAGTGGCTCCCCTGCAGATACTGGAGAGGATTCGTGTCAGAGACCAATGCTTCCTGCTTGGGAGGTATTGGAAGCCATTCCTTTTGTCCTTGATGCCATTTTAACTGCTTGCGCCCATGGCAGGCTTTCATCTCGGGACCTGACAACAGGCCTGAGAGACCTCGTTGAGTTTCTGCCCGCTTCTCTTGCTGCCATTATTAGTTACTTCTCTGCAGAAGTTACTCGTGGTATATGGAAACCAGTGCCTATGAATGGAATAGACTGGCCTAGTCCAGCAGTGATTCTTCAGTCAGTTGACTCTGAAATAAAAGAAATACTTGATGCTGTTGGTGTCAATGTTCCGAGCTGTACCTCTGGGATTTCAACCGCAATGCTCCCACTTCCACTGGCTGCTCTTGTGAGTTTAACCATTACTTTTAAACTCGAGAAGAGCGTTGAATACGTCCATACTGTTGCTGGGCTGGCCTTGGAGAACTGTGCATCAGGTTGTTGTTGGCCTAGCATGCCTATTGTAGGCTGTTTGTGGGCTCAAAAGGTCCGCCGCTGGCATAATTTCATTGTTGTATCAACTTCTCGCTCCGTATTTAGACAAAACAAAGATGCTGTTGCACAGCTTCTGAGAAGTTGCTTCTCCTCATTTCTTGGCACGCCCCATGCTTCAACCTCTTCGTTGTCCAGTCAAAGCAGTGTGAATGGTCTGTTGGGTTTTACCATCGCAGATATTAATGCTCGTCCTTCCGTGGCACCTGGGTTTCTATACTTGCGCTCTTGCCGGACAATACACGTTGTCCAATATGTGAATGATGTGATTGTAGGACTAGTGGCAGAGTATGCTGTGAAATTAGTCACCAGATGTGCAAGAACGGACTCCCCTCGCTTGAATTCTAGTCAGGTATCACAGTGCCTAGCCATTGCAAAGACAAAGGAAGTGGCCTCACTTGGTGCAAGTCTCTTGTGTGTGACAGGCGGAGTCCAGCTGGTTCAAGAACTGTACCGGGAAACCATCCCAAACCGGTTGCTCTCGTCGAAGGAAGAGAGACATGGGGAGGCAAACGCTGTGTCCCGTGTAATGGAGGGGTATGCGATGGCATATCTGGTGATTCTGTCAGGCTCAATCGAATGGGGCATCGGAGACAACTTGCCATCATGGACACTCTCAAGACGAGCGAGGGTTGTCGGGATCCACATGGACTTTCTGGCAGGGGCATTGGAGGGGAACATATCGCTTGGTTGTCATCCAGCTACTTGGAAAGCTTATGTTTCGTGCTTGGTGGGTTTGATGGTGAACTTTGCTCCGGTGTGGATACGAGAAGTGAAGGTGGAGACGTTGAGGAAATTGGCCGGCGGACTGAGAGGGTGGCACGAATGTGAACTAGCCCTTTCGCTTCTCGAAAGAGGCGGGGCTTCGGCCGTCGGATCTGCCGCCGAATTAGTAGTAAATGTACTGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

628

Amino Acids

67.57

Weight (kDa)

6.61

Isoelectric Point (pI)

50.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006938)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 FvH4_6g09250 FvH4_6g09250
malus_domestica	MD04G1179600.v1.1 MD12G1194700.v1.1
prunus_persica	Prupe.6G299600_v2.0.a1 Prupe.6G299600_v2.0.a1
pyrus_communis	pycom04g15860 pycom12g18080 pycom12g18090
rosa_chinensis	RchiOBHm_Chr3g0459591
rosa_laevigata	RLG00000025076
rosa_multiflora	Rmu_co8219898.1_g000001 Rmu_sc0023410.1_g000001 Rmu_sc0023706.1_g000003
rosa_roxburghii	Rroxscaffold_6G00420150
rosa_rugosa	Rorug03G0036600
rosa_samantha	Rh3AG095600 Rh3BG097500 Rh3CG099900 Rh3DG099200
rosa_wichuraiana	Rw0G013840 Rw0G017590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	184
Acc16I	TGCGCA	1 cut(s)	158
Acc36I	ACCTGC	1 cut(s)	184
Acc65I	GGTACC	1 cut(s)	270
AccB1I	GGYRCC	2 cut(s)	270, 1174
AciI	CCGC	8 cut(s)	609, 798, 970, 973, 1398, 1776, 1830, 1854
AclWI	GGATC	4 cut(s)	213, 1606, 1619, 1855
AcoI	YGGCCR	3 cut(s)	163, 1770, 1839
AcsI	RAATTY	2 cut(s)	68, 1312
AcuI	CTGAAG	1 cut(s)	701
AdeI	CACNNNGTG	1 cut(s)	1373
AfaI	GTAC	4 cut(s)	272, 781, 1424, 1875
AfiI	CCNNNNNNNGG	5 cut(s)	122, 552, 683, 944, 1501
AflIII	ACRYGT	1 cut(s)	1213
AgeI	ACCGGT	1 cut(s)	1443
AgsI	TTSAA	7 cut(s)	215, 300, 795, 869, 1092, 1312, 1415
AhlI	ACTAGT	1 cut(s)	1249
AjnI	CCWGG	2 cut(s)	266, 1177
AjuI	GAANNNNNNNTTGG	4 cut(s)	391, 423, 1115, 1147
AleI	CACNNNNGTG	1 cut(s)	1797
AluBI	AGCT	6 cut(s)	211, 777, 1045, 1408, 1673, 1685
AluI	AGCT	6 cut(s)	211, 777, 1045, 1408, 1673, 1685
Alw26I	GTCTC	7 cut(s)	182, 466, 582, 1385, 1462, 1557, 1748
AlwI	GGATC	4 cut(s)	213, 1606, 1619, 1855
AlwNI	CAGNNNCTG	2 cut(s)	452, 1048
Ama87I	CYCGRG	2 cut(s)	564, 854
AoxI	GGCC	9 cut(s)	163, 390, 580, 695, 894, 926, 1362, 1770, 1839
ApaI	GGGCCC	1 cut(s)	394
ApeKI	GCWGC	2 cut(s)	620, 821
ApoI	RAATTY	2 cut(s)	68, 1312
ArsI	GACNNNNNNTTYG	2 cut(s)	1475, 1507
AseI	ATTAAT	1 cut(s)	1155
AsiGI	ACCGGT	1 cut(s)	1443
Asp700I	GAANNNNTTC	1 cut(s)	507
Asp718I	GGTACC	1 cut(s)	270
AspLEI	GCGC	4 cut(s)	159, 425, 545, 1197
AspS9I	GGNCC	7 cut(s)	113, 230, 390, 391, 413, 568, 967
AsuC2I	CCSGG	2 cut(s)	181, 1427
AsuHPI	GGTGA	5 cut(s)	17, 213, 1270, 1540, 1726
AvaI	CYCGRG	2 cut(s)	564, 854
AvaII	GGWCC	5 cut(s)	113, 230, 413, 568, 967
BaeGI	GKGCMC	1 cut(s)	394
BalI	TGGCCA	1 cut(s)	165
BamHI	GGATCC	1 cut(s)	1611
BanI	GGYRCC	2 cut(s)	270, 1174
BanII	GRGCYC	2 cut(s)	394, 961
BauI	CACGAG	1 cut(s)	654
BbvI	GCAGC	2 cut(s)	607, 808
BccI	CCATC	6 cut(s)	424, 1151, 1442, 1510, 1582, 1705
BceAI	ACGGC	2 cut(s)	211, 1826
BciT130I	CCWGG	2 cut(s)	268, 1179
BciVI	GTATCC	1 cut(s)	1728
BcnI	CCSGG	2 cut(s)	181, 1427
BcoDI	GTCTC	7 cut(s)	182, 466, 582, 1385, 1462, 1557, 1748
BcuI	ACTAGT	1 cut(s)	1249
BfaI	CTAG	8 cut(s)	318, 381, 699, 930, 1250, 1317, 1337, 1805
BfmI	CTRYAG	2 cut(s)	444, 642
BfoI	RGCGCY	1 cut(s)	426
BfuAI	ACCTGC	1 cut(s)	184
BfuI	GTATCC	1 cut(s)	1728
BglII	AGATCT	1 cut(s)	284
BisI	GCNGC	4 cut(s)	621, 822, 973, 1854
BlsI	GCNGC	4 cut(s)	622, 823, 974, 1855
Bme1390I	CCNGG	4 cut(s)	181, 268, 1179, 1427
Bme18I	GGWCC	5 cut(s)	113, 230, 413, 568, 967
BmeT110I	CYCGRG	2 cut(s)	564, 854
BmgT120I	GGNCC	7 cut(s)	113, 230, 390, 391, 413, 568, 967
BmiI	GGNNCC	9 cut(s)	231, 272, 391, 392, 393, 439, 569, 1176, 1613
BmrFI	CCNGG	4 cut(s)	181, 268, 1179, 1427
BmsI	GCATC	5 cut(s)	514, 742, 920, 1021, 1566
BpmI	CTGGAG	1 cut(s)	474
BpuEI	CTTGAG	2 cut(s)	107, 1573
BpuMI	CCSGG	2 cut(s)	181, 1427
BsaBI	GATNNNNATC	1 cut(s)	249
BsaI	GGTCTC	2 cut(s)	466, 582
BsaJI	CCNNGG	5 cut(s)	180, 547, 897, 1170, 1178
BsaWI	WCCGGW	2 cut(s)	1443, 1726
BsaXI	ACNNNNNCTCC	2 cut(s)	102, 132
Bsc4I	CCNNNNNNNGG	5 cut(s)	122, 552, 683, 944, 1501
Bse118I	RCCGGY	2 cut(s)	1443, 1772
Bse1I	ACTGG	9 cut(s)	116, 309, 426, 457, 671, 698, 822, 1107, 1881
Bse3DI	GCAATG	4 cut(s)	166, 168, 807, 1341
Bse8I	GATNNNNATC	1 cut(s)	249
BseBI	CCWGG	2 cut(s)	268, 1179
BseDI	CCNNGG	5 cut(s)	180, 547, 897, 1170, 1178
BseGI	GGATG	3 cut(s)	190, 1434, 1666
BseJI	GATNNNNATC	1 cut(s)	249
BseLI	CCNNNNNNNGG	5 cut(s)	122, 552, 683, 944, 1501
BseMI	GCAATG	4 cut(s)	166, 168, 807, 1341
BseMII	CTCAG	3 cut(s)	575, 1040, 1772
BseNI	ACTGG	9 cut(s)	116, 309, 426, 457, 671, 698, 822, 1107, 1881
BseRI	GAGGAG	2 cut(s)	123, 1054
BseSI	GKGCMC	1 cut(s)	394
BseX3I	CGGCCG	1 cut(s)	1839
BseXI	GCAGC	2 cut(s)	607, 808
BseYI	CCCAGC	1 cut(s)	887
Bsh1285I	CGRYCG	1 cut(s)	1842
BshFI	GGCC	9 cut(s)	165, 392, 582, 697, 896, 928, 1364, 1772, 1841
BshNI	GGYRCC	2 cut(s)	270, 1174
BshTI	ACCGGT	1 cut(s)	1443
BsiEI	CGRYCG	1 cut(s)	1842
BsiHKCI	CYCGRG	2 cut(s)	564, 854
BsiSI	CCGG	6 cut(s)	180, 1204, 1426, 1444, 1727, 1773
BslFI	GGGAC	3 cut(s)	243, 581, 1477
BslI	CCNNNNNNNGG	5 cut(s)	122, 552, 683, 944, 1501
BsmAI	GTCTC	7 cut(s)	182, 466, 582, 1385, 1462, 1557, 1748
BsmBI	CGTCTC	1 cut(s)	1748
BsmFI	GGGAC	3 cut(s)	243, 581, 1477
BsnI	GGCC	9 cut(s)	165, 392, 582, 697, 896, 928, 1364, 1772, 1841
Bso31I	GGTCTC	2 cut(s)	466, 582
BsoBI	CYCGRG	2 cut(s)	564, 854
Bsp120I	GGGCCC	1 cut(s)	390
Bsp1286I	GDGCHC	2 cut(s)	394, 961
Bsp143I	GATC	4 cut(s)	205, 284, 1611, 1847
Bsp19I	CCATGG	1 cut(s)	547
BspACI	CCGC	8 cut(s)	609, 798, 970, 973, 1398, 1776, 1830, 1854
BspANI	GGCC	9 cut(s)	165, 392, 582, 697, 896, 928, 1364, 1772, 1841
BspCNI	CTCAG	3 cut(s)	576, 1041, 1773
BspLI	GGNNCC	9 cut(s)	231, 272, 391, 392, 393, 439, 569, 1176, 1613
BspMAI	CTGCAG	2 cut(s)	448, 646
BspMI	ACCTGC	1 cut(s)	184
BspPI	GGATC	4 cut(s)	213, 1606, 1619, 1855
BspQI	GCTCTTC	1 cut(s)	854
BspT107I	GGYRCC	2 cut(s)	270, 1174
BspTNI	GGTCTC	2 cut(s)	466, 582
BsrDI	GCAATG	4 cut(s)	166, 168, 807, 1341
BsrFI	RCCGGY	2 cut(s)	1443, 1772
BsrI	ACTGG	9 cut(s)	116, 309, 426, 457, 671, 698, 822, 1107, 1881
BssAI	RCCGGY	2 cut(s)	1443, 1772
BssECI	CCNNGG	5 cut(s)	180, 547, 897, 1170, 1178
BssMI	GATC	4 cut(s)	205, 284, 1611, 1847
BssSI	CACGAG	1 cut(s)	654
BssT1I	CCWWGG	2 cut(s)	547, 897
Bst2BI	CACGAG	1 cut(s)	654
Bst2UI	CCWGG	2 cut(s)	268, 1179
Bst4CI	ACNGT	5 cut(s)	275, 883, 908, 1332, 1422
Bst6I	CTCTTC	4 cut(s)	412, 854, 1102, 1458
BstAPI	GCANNNNNTGC	1 cut(s)	1262
BstC8I	GCNNGC	8 cut(s)	541, 554, 609, 894, 935, 977, 1079, 1774
BstDEI	CTNAG	3 cut(s)	584, 1049, 1781
BstDSI	CCRYGG	2 cut(s)	547, 1170
BstENI	CCTNNNNNAGG	1 cut(s)	942
BstF5I	GGATG	3 cut(s)	190, 1434, 1666
BstH2I	RGCGCY	1 cut(s)	426
BstHHI	GCGC	4 cut(s)	159, 425, 545, 1197
BstKTI	GATC	4 cut(s)	208, 287, 1614, 1850
BstMAI	GTCTC	7 cut(s)	182, 466, 582, 1385, 1462, 1557, 1748
BstMBI	GATC	4 cut(s)	205, 284, 1611, 1847
BstMCI	CGRYCG	1 cut(s)	1842
BstMWI	GCNNNNNNNGC	5 cut(s)	549, 617, 893, 934, 1262
BstNI	CCWGG	2 cut(s)	268, 1179
BstNSI	RCATGY	1 cut(s)	937
BstSCI	CCNGG	4 cut(s)	179, 266, 1177, 1425
BstSFI	CTRYAG	2 cut(s)	444, 642
BstSLI	GKGCMC	1 cut(s)	394
BstV1I	GCAGC	2 cut(s)	607, 808
BstX2I	RGATCY	3 cut(s)	284, 1611, 1847
BstXI	CCANNNNNNTGG	2 cut(s)	25, 1677
BstYI	RGATCY	3 cut(s)	284, 1611, 1847
BstZI	CGGCCG	1 cut(s)	1839
BsuI	GTATCC	1 cut(s)	1728
BsuRI	GGCC	9 cut(s)	165, 392, 582, 697, 896, 928, 1364, 1772, 1841
BtgI	CCRYGG	2 cut(s)	547, 1170
BtgZI	GCGATG	2 cut(s)	1129, 1529
BtsCI	GGATG	3 cut(s)	190, 1434, 1666
BtsI	GCAGTG	3 cut(s)	205, 714, 1123
BtsIMutI	CAGTG	6 cut(s)	205, 678, 714, 815, 1123, 1337
BveI	ACCTGC	1 cut(s)	184
Cac8I	GCNNGC	8 cut(s)	541, 554, 609, 894, 935, 977, 1079, 1774
CaiI	CAGNNNCTG	2 cut(s)	452, 1048
CfoI	GCGC	4 cut(s)	159, 425, 545, 1197
Cfr10I	RCCGGY	2 cut(s)	1443, 1772
Cfr13I	GGNCC	7 cut(s)	113, 230, 390, 391, 413, 568, 967
Csp6I	GTAC	4 cut(s)	271, 780, 1423, 1874
CspAI	ACCGGT	1 cut(s)	1443
CspCI	CAANNNNNGTGG	2 cut(s)	1341, 1376
CviAII	CATG	8 cut(s)	25, 335, 548, 934, 1085, 1472, 1578, 1618
CviQI	GTAC	4 cut(s)	271, 780, 1423, 1874
DdeI	CTNAG	3 cut(s)	584, 1049, 1781
DpnI	GATC	4 cut(s)	207, 286, 1613, 1849
DpnII	GATC	4 cut(s)	205, 284, 1611, 1847
DraI	TTTAAA	1 cut(s)	850
DraIII	CACNNNGTG	1 cut(s)	1373
EaeI	YGGCCR	3 cut(s)	163, 1770, 1839
EagI	CGGCCG	1 cut(s)	1839
Eam1104I	CTCTTC	4 cut(s)	412, 854, 1102, 1458
EarI	CTCTTC	4 cut(s)	412, 854, 1102, 1458
EciI	GGCGGA	3 cut(s)	959, 1413, 1791
EclXI	CGGCCG	1 cut(s)	1839
Eco130I	CCWWGG	2 cut(s)	547, 897
Eco147I	AGGCCT	1 cut(s)	582
Eco24I	GRGCYC	2 cut(s)	394, 961
Eco31I	GGTCTC	2 cut(s)	466, 582
Eco47I	GGWCC	5 cut(s)	113, 230, 413, 568, 967
Eco52I	CGGCCG	1 cut(s)	1839
Eco57I	CTGAAG	1 cut(s)	701
Eco88I	CYCGRG	2 cut(s)	564, 854
EcoNI	CCTNNNNNAGG	1 cut(s)	942
EcoO109I	RGGNCCY	4 cut(s)	230, 390, 391, 568
EcoRI	GAATTC	1 cut(s)	1312
EcoRII	CCWGG	2 cut(s)	266, 1177
EcoT14I	CCWWGG	2 cut(s)	547, 897
EcoT38I	GRGCYC	2 cut(s)	394, 961
ErhI	CCWWGG	2 cut(s)	547, 897
Esp3I	CGTCTC	1 cut(s)	1748
FaeI	CATG	8 cut(s)	28, 338, 551, 937, 1088, 1475, 1581, 1621
FalI	AAGNNNNNCTT	4 cut(s)	391, 423, 732, 764
FaqI	GGGAC	3 cut(s)	243, 581, 1477
FatI	CATG	8 cut(s)	24, 334, 547, 933, 1084, 1471, 1577, 1617
FauI	CCCGC	2 cut(s)	616, 1823
Fnu4HI	GCNGC	4 cut(s)	621, 822, 973, 1854
FokI	GGATG	3 cut(s)	197, 1421, 1653
FriOI	GRGCYC	2 cut(s)	394, 961
Fsp4HI	GCNGC	4 cut(s)	621, 822, 973, 1854
FspBI	CTAG	8 cut(s)	318, 381, 699, 930, 1250, 1317, 1337, 1805
FspI	TGCGCA	1 cut(s)	158
GlaI	GCGC	4 cut(s)	158, 424, 544, 1196
GluI	GCNGC	4 cut(s)	621, 822, 973, 1854
GsaI	CCCAGC	1 cut(s)	891
GsuI	CTGGAG	1 cut(s)	474
HaeII	RGCGCY	1 cut(s)	426
HaeIII	GGCC	9 cut(s)	165, 392, 582, 697, 896, 928, 1364, 1772, 1841
HapII	CCGG	6 cut(s)	180, 1204, 1426, 1444, 1727, 1773
HhaI	GCGC	4 cut(s)	159, 425, 545, 1197
Hin1II	CATG	8 cut(s)	28, 338, 551, 937, 1088, 1475, 1581, 1621
Hin6I	GCGC	4 cut(s)	157, 423, 543, 1195
HinP1I	GCGC	4 cut(s)	157, 423, 543, 1195
HincII	GTYRAC	1 cut(s)	727
HindII	GTYRAC	1 cut(s)	727
HindIII	AAGCTT	1 cut(s)	1683
HinfI	GANTC	9 cut(s)	11, 215, 245, 461, 712, 728, 1298, 1401, 1531
HpaII	CCGG	6 cut(s)	180, 1204, 1426, 1444, 1727, 1773
HphI	GGTGA	5 cut(s)	17, 213, 1270, 1540, 1726
Hpy166II	GTNNAC	3 cut(s)	727, 1717, 1802
Hpy188I	TCNGA	6 cut(s)	471, 733, 774, 1050, 1562, 1847
Hpy188III	TCNNGA	9 cut(s)	86, 278, 411, 566, 856, 1415, 1590, 1609, 1820
Hpy8I	GTNNAC	3 cut(s)	727, 1717, 1802
Hpy99I	CGWCG	2 cut(s)	1459, 1847
HpyAV	CCTTC	3 cut(s)	1176, 1453, 1741
HpyCH4III	ACNGT	5 cut(s)	275, 883, 908, 1332, 1422
HpyCH4IV	ACGT	4 cut(s)	134, 873, 1215, 1757
HpyCH4V	TGCA	9 cut(s)	173, 240, 446, 644, 911, 1040, 1289, 1346, 1376
HpyF10VI	GCNNNNNNNGC	5 cut(s)	549, 617, 893, 934, 1262
HpyF3I	CTNAG	3 cut(s)	584, 1049, 1781
HpySE526I	ACGT	4 cut(s)	134, 873, 1215, 1757
Hsp92II	CATG	8 cut(s)	28, 338, 551, 937, 1088, 1475, 1581, 1621
HspAI	GCGC	4 cut(s)	157, 423, 543, 1195
KpnI	GGTACC	1 cut(s)	274
KroI	GCCGGC	1 cut(s)	1772
KroNI	GCCGGC	1 cut(s)	1774
Kzo9I	GATC	4 cut(s)	205, 284, 1611, 1847
LguI	GCTCTTC	1 cut(s)	854
LmnI	GCTCC	4 cut(s)	443, 810, 1013, 1729
Lsp1109I	GCAGC	2 cut(s)	607, 808
LweI	GCATC	5 cut(s)	514, 742, 920, 1021, 1566
MaeI	CTAG	8 cut(s)	318, 381, 699, 930, 1250, 1317, 1337, 1805
MaeII	ACGT	4 cut(s)	134, 873, 1215, 1757
MaeIII	GTNAC	5 cut(s)	401, 632, 649, 1276, 1390
MalI	GATC	4 cut(s)	207, 286, 1613, 1849
MboI	GATC	4 cut(s)	205, 284, 1611, 1847
MboII	GAAGA	5 cut(s)	399, 707, 871, 1089, 1475
MflI	RGATCY	3 cut(s)	284, 1611, 1847
MhlI	GDGCHC	2 cut(s)	394, 961
MlsI	TGGCCA	1 cut(s)	165
MluCI	AATT	7 cut(s)	68, 257, 982, 1271, 1312, 1766, 1859
MluNI	TGGCCA	1 cut(s)	165
MlyI	GAGTC	4 cut(s)	20, 722, 1292, 1410
MmeI	TCCRAC	3 cut(s)	100, 117, 1825
Mox20I	TGGCCA	1 cut(s)	165
MroNI	GCCGGC	1 cut(s)	1772
MroXI	GAANNNNTTC	1 cut(s)	507
MscI	TGGCCA	1 cut(s)	165
MseI	TTAA	5 cut(s)	356, 533, 836, 849, 1155
MslI	CAYNNNNRTG	2 cut(s)	23, 1797
Msp20I	TGGCCA	1 cut(s)	165
MspA1I	CMGCKG	2 cut(s)	975, 1408
MspI	CCGG	6 cut(s)	180, 1204, 1426, 1444, 1727, 1773
MspR9I	CCNGG	4 cut(s)	181, 268, 1179, 1427
MvaI	CCWGG	2 cut(s)	268, 1179
MwoI	GCNNNNNNNGC	5 cut(s)	549, 617, 893, 934, 1262
NaeI	GCCGGC	1 cut(s)	1774
NciI	CCSGG	2 cut(s)	181, 1427
NcoI	CCATGG	1 cut(s)	547
NdeII	GATC	4 cut(s)	205, 284, 1611, 1847
NgoMIV	GCCGGC	1 cut(s)	1772
NlaIII	CATG	8 cut(s)	28, 338, 551, 937, 1088, 1475, 1581, 1621
NlaIV	GGNNCC	9 cut(s)	231, 272, 391, 392, 393, 439, 569, 1176, 1613
NmuCI	GTSAC	2 cut(s)	1276, 1390
NsbI	TGCGCA	1 cut(s)	158
NspI	RCATGY	1 cut(s)	937
OliI	CACNNNNGTG	1 cut(s)	1797
PaeI	GCATGC	1 cut(s)	937
PaeR7I	CTCGAG	1 cut(s)	854
PaqCI	CACCTGC	1 cut(s)	184
PceI	AGGCCT	1 cut(s)	582
PciSI	GCTCTTC	1 cut(s)	854
PcsI	WCGNNNNNNNCGW	1 cut(s)	861
PdiI	GCCGGC	1 cut(s)	1774
PdmI	GAANNNNTTC	1 cut(s)	507
PfeI	GAWTC	5 cut(s)	215, 245, 461, 712, 1531
PinAI	ACCGGT	1 cut(s)	1443
PkrI	GCNGC	4 cut(s)	622, 823, 974, 1855
PleI	GAGTC	4 cut(s)	19, 722, 1292, 1409
PpsI	GAGTC	4 cut(s)	19, 722, 1292, 1409
PpuMI	RGGWCCY	2 cut(s)	230, 568
PshBI	ATTAAT	1 cut(s)	1155
Psp5II	RGGWCCY	2 cut(s)	230, 568
Psp6I	CCWGG	2 cut(s)	266, 1177
PspFI	CCCAGC	1 cut(s)	887
PspGI	CCWGG	2 cut(s)	266, 1177
PspN4I	GGNNCC	9 cut(s)	231, 272, 391, 392, 393, 439, 569, 1176, 1613
PspOMI	GGGCCC	1 cut(s)	390
PspPI	GGNCC	7 cut(s)	113, 230, 390, 391, 413, 568, 967
PspPPI	RGGWCCY	2 cut(s)	230, 568
PstI	CTGCAG	2 cut(s)	448, 646
PstNI	CAGNNNCTG	2 cut(s)	452, 1048
PsuI	RGATCY	3 cut(s)	284, 1611, 1847
PvuII	CAGCTG	1 cut(s)	1408
RsaI	GTAC	4 cut(s)	272, 781, 1424, 1875
RsaNI	GTAC	4 cut(s)	271, 780, 1423, 1874
RseI	CAYNNNNRTG	2 cut(s)	23, 1797
SapI	GCTCTTC	1 cut(s)	854
SaqAI	TTAA	5 cut(s)	356, 533, 836, 849, 1155
SatI	GCNGC	4 cut(s)	621, 822, 973, 1854
Sau3AI	GATC	4 cut(s)	205, 284, 1611, 1847
Sau96I	GGNCC	7 cut(s)	113, 230, 390, 391, 413, 568, 967
SchI	GAGTC	4 cut(s)	20, 722, 1292, 1410
ScrFI	CCNGG	4 cut(s)	181, 268, 1179, 1427
SduI	GDGCHC	2 cut(s)	394, 961
SfaNI	GCATC	5 cut(s)	514, 742, 920, 1021, 1566
SfcI	CTRYAG	2 cut(s)	444, 642
Sfr274I	CTCGAG	1 cut(s)	854
SinI	GGWCC	5 cut(s)	113, 230, 413, 568, 967
SlaI	CTCGAG	1 cut(s)	854
SmiMI	CAYNNNNRTG	2 cut(s)	23, 1797
SmlI	CTYRAG	3 cut(s)	86, 854, 1588
SmoI	CTYRAG	3 cut(s)	86, 854, 1588
SpeI	ACTAGT	1 cut(s)	1249
SphI	GCATGC	1 cut(s)	937
Sse9I	AATT	7 cut(s)	68, 257, 982, 1271, 1312, 1766, 1859
SseBI	AGGCCT	1 cut(s)	582
SsiI	CCGC	8 cut(s)	609, 798, 970, 973, 1398, 1776, 1830, 1854
SspMI	CTAG	8 cut(s)	318, 381, 699, 930, 1250, 1317, 1337, 1805
StuI	AGGCCT	1 cut(s)	582
StyD4I	CCNGG	4 cut(s)	179, 266, 1177, 1425
StyI	CCWWGG	2 cut(s)	547, 897
TaaI	ACNGT	5 cut(s)	275, 883, 908, 1332, 1422
TaiI	ACGT	4 cut(s)	137, 876, 1218, 1760
TaqI	TCGA	4 cut(s)	855, 1457, 1548, 1821
TasI	AATT	7 cut(s)	68, 257, 982, 1271, 1312, 1766, 1859
TatI	WGTACW	1 cut(s)	1873
TauI	GCSGC	2 cut(s)	975, 1856
TfiI	GAWTC	5 cut(s)	215, 245, 461, 712, 1531
Tru1I	TTAA	5 cut(s)	356, 533, 836, 849, 1155
Tru9I	TTAA	5 cut(s)	356, 533, 836, 849, 1155
TscAI	CASTG	6 cut(s)	205, 678, 714, 822, 1123, 1337
TseFI	GTSAC	2 cut(s)	1276, 1390
TseI	GCWGC	2 cut(s)	620, 821
Tsp45I	GTSAC	2 cut(s)	1276, 1390
TspDTI	ATGAA	4 cut(s)	351, 549, 695, 976
TspGWI	ACGGA	4 cut(s)	116, 1000, 1159, 1310
TspRI	CASTG	6 cut(s)	205, 678, 714, 822, 1123, 1337
VpaK11BI	GGWCC	5 cut(s)	113, 230, 413, 568, 967
VspI	ATTAAT	1 cut(s)	1155
XagI	CCTNNNNNAGG	1 cut(s)	942
XapI	RAATTY	2 cut(s)	68, 1312
XceI	RCATGY	1 cut(s)	937
XcmI	CCANNNNNNNNNTGG	1 cut(s)	884
XhoI	CTCGAG	1 cut(s)	854
XmnI	GAANNNNTTC	1 cut(s)	507
XspI	CTAG	8 cut(s)	318, 381, 699, 930, 1250, 1317, 1337, 1805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.