MD04G1181400.v1.1

Bifunctional protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
27213926 .. 27216718
2793 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1181400.v1.1.491

Sequence Viewer

Length: 1101 bp
ATGATGGCACGAGTGGCATTGCCATGGCGGAACGGACTCAGAACCAGAGTTCCGGCGGGAAGCAGAGGCTGCAGCGGAGCTCAGACCACCTTGAGAAACGACGCCGGCCACCCGATTATCATCTCTCCTCCTCTCGTCTCCTTAGACATACCTGACGATTGGGCTCCCGGCACTGCCCAATCTGGGTTTTCTTCCCCCTTGAGTTTCTCAAACGAGCAGAAAGCTGCTGTGATTGATGGGAAATCGATAGCGGATGAAATTAGATTAAGGATAGGCAGTGAGGTGAGGAGGATGAAGGAGAGCATTGGAATGGTTCCTGGATTGGCTGTAATTGTGGTGGGCCACAGAAGGGACTCGCAGACTTACGTCCGAAACAAGGTGATGGCTTGTGAAGAAGTTGGAATCAAATCAATGGTTACTCAGCTACCTGAAGAGTGTACAAAAGATCAACTTCTTGGCGCTTTATCTTGTTTCGATGTGGATCCCTCTGTTCATGGTATTCTCGTGCAACTTCCTCTACCACAACATTTGGATGAGGGAAGAGTTTTGGATGTGCTGAGTCCAGAGAAAGATGTCGATGGCTTCCACCCGATTAATATGGGAAATCTAGCTATGAGAGGAAGGGAGCCTTTGTTCATTCCCTGCACTCCCAAGGGTTGCATTGAGTTGTTGCTCAGGTCTGGTGTGGAAATTGCGGGGAAGAAAGCTACTGTGATTGGGAGAAGTAACATTGTCGGACTTCCAGCATCACTGCTCCTGCAGAGGCACCATGCAACAGTCAGCATTGTACATGCGTTCACAAAGAACCCAGAACATATCACCTGTGAAGCCGACATTGTGGTCACAGCTGCCGGAGTGCCTAATCTGGTCCGTGGAAATTGGCTGAAGCCTGGAGCAGTTGTTATCGACATTGGAACTACTCCAGTTGAGGACCAAAGCTGTGAGCATGGTTACCGTCTCACCGGAGATGTTTGCTACGAAGAAGCAGTGCGGGTGGCATCAGCCATCACCCCAGTGCCTGGAGGAGTTGGACCCATGACAATTGCCATGCTTCTATCAAACACCCTTGACTCGGCAAAGCGAGTATGCGCCTTCACATGA

Protein Analysis

367

Amino Acids

39.14

Weight (kDa)

6.56

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
THF_DHG_CYH PF00763 78 - 193 3e-37 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
THF_DHG_CYH_C PF02882 214 - 361 3.7e-56 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 839
AccB1I GGYRCC 1 cut(s) 765
AccB7I CCANNNNNTGG 1 cut(s) 1019
AciI CCGC 6 cut(s) 28, 56, 75, 251, 695, 991
AclWI GGATC 2 cut(s) 476, 489
AcoI YGGCCR 1 cut(s) 106
AcuI CTGAAG 2 cut(s) 450, 905
AcyI GRCGYC 1 cut(s) 102
AfaI GTAC 2 cut(s) 439, 789
AfiI CCNNNNNNNGG 5 cut(s) 183, 349, 376, 1019, 1072
AjnI CCWGG 3 cut(s) 316, 889, 1018
AleI CACNNNNGTG 1 cut(s) 1013
AloI GAACNNNNNNTCC 4 cut(s) 34, 66, 617, 649
AluBI AGCT 7 cut(s) 80, 224, 424, 611, 707, 848, 939
AluI AGCT 7 cut(s) 80, 224, 424, 611, 707, 848, 939
Alw21I GWGCWC 1 cut(s) 82
Alw26I GTCTC 2 cut(s) 142, 962
AlwI GGATC 2 cut(s) 476, 489
AlwNI CAGNNNCTG 2 cut(s) 69, 1019
AoxI GGCC 2 cut(s) 106, 340
ApeKI GCWGC 4 cut(s) 69, 72, 224, 848
AseI ATTAAT 1 cut(s) 594
AspLEI GCGC 2 cut(s) 461, 1091
AspS9I GGNCC 4 cut(s) 340, 868, 931, 1031
AsuC2I CCSGG 1 cut(s) 168
AsuHPI GGTGA 5 cut(s) 295, 391, 811, 952, 1000
AvaII GGWCC 3 cut(s) 868, 931, 1031
BamHI GGATCC 1 cut(s) 481
BanI GGYRCC 1 cut(s) 765
BanII GRGCYC 2 cut(s) 82, 166
BauI CACGAG 2 cut(s) 9, 503
Bbv12I GWGCWC 1 cut(s) 82
BbvI GCAGC 4 cut(s) 56, 84, 211, 835
BccI CCATC 4 cut(s) 230, 376, 572, 1013
BciT130I CCWGG 3 cut(s) 318, 891, 1020
BcnI CCSGG 1 cut(s) 168
BcoDI GTCTC 2 cut(s) 142, 962
BfaI CTAG 1 cut(s) 608
BfmI CTRYAG 2 cut(s) 70, 758
BfoI RGCGCY 1 cut(s) 462
BisI GCNGC 4 cut(s) 70, 73, 225, 849
BlsI GCNGC 4 cut(s) 71, 74, 226, 850
Bme1390I CCNGG 4 cut(s) 168, 318, 891, 1020
Bme18I GGWCC 3 cut(s) 868, 931, 1031
BmgT120I GGNCC 4 cut(s) 340, 868, 931, 1031
BmiI GGNNCC 6 cut(s) 165, 315, 483, 627, 767, 1033
BmrFI CCNGG 4 cut(s) 168, 318, 891, 1020
BmrI ACTGGG 1 cut(s) 1007
BmsI GCATC 2 cut(s) 755, 1007
BmuI ACTGGG 1 cut(s) 1007
BoxI GACNNNNGTC 1 cut(s) 365
BpmI CTGGAG 3 cut(s) 906, 912, 1041
Bpu10I CCTNAGC 1 cut(s) 674
BpuEI CTTGAG 2 cut(s) 112, 220
BpuMI CCSGG 1 cut(s) 168
Bsa29I ATCGAT 1 cut(s) 245
BsaBI GATNNNNATC 2 cut(s) 119, 480
BsaHI GRCGYC 1 cut(s) 102
BsaJI CCNNGG 3 cut(s) 23, 651, 871
BsaWI WCCGGW 1 cut(s) 962
BsaXI ACNNNNNCTCC 4 cut(s) 617, 647, 885, 915
Bsc4I CCNNNNNNNGG 5 cut(s) 183, 349, 376, 1019, 1072
Bse118I RCCGGY 1 cut(s) 104
Bse1I ACTGG 2 cut(s) 923, 1013
Bse3DI GCAATG 1 cut(s) 17
Bse8I GATNNNNATC 2 cut(s) 119, 480
BseBI CCWGG 3 cut(s) 318, 891, 1020
BseCI ATCGAT 1 cut(s) 245
BseDI CCNNGG 3 cut(s) 23, 651, 871
BseGI GGATG 4 cut(s) 259, 297, 538, 556
BseJI GATNNNNATC 2 cut(s) 119, 480
BseLI CCNNNNNNNGG 5 cut(s) 183, 349, 376, 1019, 1072
BseMI GCAATG 1 cut(s) 17
BseMII CTCAG 5 cut(s) 52, 95, 434, 548, 688
BseNI ACTGG 2 cut(s) 923, 1013
BseRI GAGGAG 4 cut(s) 117, 120, 301, 1038
BseXI GCAGC 4 cut(s) 56, 84, 211, 835
BsgI GTGCAG 1 cut(s) 628
BshFI GGCC 2 cut(s) 108, 342
BshNI GGYRCC 1 cut(s) 765
BshVI ATCGAT 1 cut(s) 245
BsiHKAI GWGCWC 1 cut(s) 82
BsiSI CCGG 5 cut(s) 53, 105, 168, 852, 963
BslFI GGGAC 1 cut(s) 365
BslI CCNNNNNNNGG 5 cut(s) 183, 349, 376, 1019, 1072
BsmAI GTCTC 2 cut(s) 142, 962
BsmBI CGTCTC 2 cut(s) 142, 962
BsmFI GGGAC 1 cut(s) 365
BsnI GGCC 2 cut(s) 108, 342
Bsp1286I GDGCHC 2 cut(s) 82, 166
Bsp1407I TGTACA 2 cut(s) 437, 787
Bsp143I GATC 2 cut(s) 445, 481
Bsp19I CCATGG 1 cut(s) 23
BspACI CCGC 6 cut(s) 28, 56, 75, 251, 695, 991
BspANI GGCC 2 cut(s) 108, 342
BspCNI CTCAG 5 cut(s) 51, 94, 433, 549, 687
BspDI ATCGAT 1 cut(s) 245
BspLI GGNNCC 6 cut(s) 165, 315, 483, 627, 767, 1033
BspMAI CTGCAG 2 cut(s) 74, 762
BspPI GGATC 2 cut(s) 476, 489
BspT107I GGYRCC 1 cut(s) 765
BsrDI GCAATG 1 cut(s) 17
BsrFI RCCGGY 1 cut(s) 104
BsrGI TGTACA 2 cut(s) 437, 787
BsrI ACTGG 2 cut(s) 923, 1013
BssAI RCCGGY 1 cut(s) 104
BssECI CCNNGG 3 cut(s) 23, 651, 871
BssMI GATC 2 cut(s) 445, 481
BssNI GRCGYC 1 cut(s) 102
BssSI CACGAG 2 cut(s) 9, 503
BssT1I CCWWGG 2 cut(s) 23, 651
Bst2BI CACGAG 2 cut(s) 9, 503
Bst2UI CCWGG 3 cut(s) 318, 891, 1020
Bst4CI ACNGT 3 cut(s) 712, 778, 956
Bst6I CTCTTC 2 cut(s) 426, 535
BstACI GRCGYC 1 cut(s) 102
BstAPI GCANNNNNTGC 1 cut(s) 69
BstAUI TGTACA 2 cut(s) 437, 787
BstC8I GCNNGC 1 cut(s) 106
BstDEI CTNAG 6 cut(s) 38, 81, 142, 420, 557, 674
BstDSI CCRYGG 2 cut(s) 23, 871
BstEII GGTNACC 1 cut(s) 950
BstF5I GGATG 4 cut(s) 259, 297, 538, 556
BstH2I RGCGCY 1 cut(s) 462
BstHHI GCGC 2 cut(s) 461, 1091
BstKTI GATC 2 cut(s) 448, 484
BstMAI GTCTC 2 cut(s) 142, 962
BstMBI GATC 2 cut(s) 445, 481
BstMWI GCNNNNNNNGC 2 cut(s) 14, 69
BstNI CCWGG 3 cut(s) 318, 891, 1020
BstNSI RCATGY 1 cut(s) 794
BstPAI GACNNNNGTC 1 cut(s) 365
BstPI GGTNACC 1 cut(s) 950
BstSCI CCNGG 4 cut(s) 166, 316, 889, 1018
BstSFI CTRYAG 2 cut(s) 70, 758
BstV1I GCAGC 4 cut(s) 56, 84, 211, 835
BstX2I RGATCY 1 cut(s) 481
BstYI RGATCY 1 cut(s) 481
Bsu15I ATCGAT 1 cut(s) 245
BsuRI GGCC 2 cut(s) 108, 342
BsuTUI ATCGAT 1 cut(s) 245
BtgI CCRYGG 2 cut(s) 23, 871
BtsCI GGATG 4 cut(s) 259, 297, 538, 556
BtsI GCAGTG 4 cut(s) 171, 283, 749, 993
BtsIMutI CAGTG 5 cut(s) 171, 283, 749, 993, 1020
Cac8I GCNNGC 1 cut(s) 106
CaiI CAGNNNCTG 2 cut(s) 69, 1019
CfoI GCGC 2 cut(s) 461, 1091
Cfr10I RCCGGY 1 cut(s) 104
Cfr13I GGNCC 4 cut(s) 340, 868, 931, 1031
ClaI ATCGAT 1 cut(s) 245
CseI GACGC 1 cut(s) 110
Csp6I GTAC 2 cut(s) 438, 788
CspCI CAANNNNNGTGG 2 cut(s) 510, 545
CviAII CATG 8 cut(s) 24, 494, 770, 791, 947, 1036, 1048, 1098
CviQI GTAC 2 cut(s) 438, 788
DdeI CTNAG 6 cut(s) 38, 81, 142, 420, 557, 674
DpnI GATC 2 cut(s) 447, 483
DpnII GATC 2 cut(s) 445, 481
DrdI GACNNNNNNGTC 1 cut(s) 839
DseDI GACNNNNNNGTC 1 cut(s) 839
EaeI YGGCCR 1 cut(s) 106
Eam1104I CTCTTC 2 cut(s) 426, 535
EarI CTCTTC 2 cut(s) 426, 535
EciI GGCGGA 1 cut(s) 43
Ecl136II GAGCTC 1 cut(s) 80
Eco130I CCWWGG 2 cut(s) 23, 651
Eco24I GRGCYC 2 cut(s) 82, 166
Eco47I GGWCC 3 cut(s) 868, 931, 1031
Eco53kI GAGCTC 1 cut(s) 80
Eco57I CTGAAG 2 cut(s) 450, 905
Eco91I GGTNACC 1 cut(s) 950
EcoICRI GAGCTC 1 cut(s) 80
EcoO65I GGTNACC 1 cut(s) 950
EcoRII CCWGG 3 cut(s) 316, 889, 1018
EcoT14I CCWWGG 2 cut(s) 23, 651
EcoT38I GRGCYC 2 cut(s) 82, 166
ErhI CCWWGG 2 cut(s) 23, 651
Esp3I CGTCTC 2 cut(s) 142, 962
FaeI CATG 8 cut(s) 27, 497, 773, 794, 950, 1039, 1051, 1101
FalI AAGNNNNNCTT 4 cut(s) 435, 467, 613, 645
FaqI GGGAC 1 cut(s) 365
FatI CATG 8 cut(s) 23, 493, 769, 790, 946, 1035, 1047, 1097
FauI CCCGC 3 cut(s) 49, 688, 984
Fnu4HI GCNGC 4 cut(s) 70, 73, 225, 849
FokI GGATG 4 cut(s) 266, 304, 545, 563
FriOI GRGCYC 2 cut(s) 82, 166
Fsp4HI GCNGC 4 cut(s) 70, 73, 225, 849
FspBI CTAG 1 cut(s) 608
GlaI GCGC 2 cut(s) 460, 1090
GluI GCNGC 4 cut(s) 70, 73, 225, 849
GsuI CTGGAG 3 cut(s) 906, 912, 1041
HaeII RGCGCY 1 cut(s) 462
HaeIII GGCC 2 cut(s) 108, 342
HapII CCGG 5 cut(s) 53, 105, 168, 852, 963
HgaI GACGC 1 cut(s) 110
HhaI GCGC 2 cut(s) 461, 1091
Hin1I GRCGYC 1 cut(s) 102
Hin1II CATG 8 cut(s) 27, 497, 773, 794, 950, 1039, 1051, 1101
Hin6I GCGC 2 cut(s) 459, 1089
HinP1I GCGC 2 cut(s) 459, 1089
HinfI GANTC 5 cut(s) 36, 353, 402, 559, 1070
HpaII CCGG 5 cut(s) 53, 105, 168, 852, 963
HphI GGTGA 5 cut(s) 295, 391, 811, 952, 1000
Hpy166II GTNNAC 2 cut(s) 438, 798
Hpy188I TCNGA 4 cut(s) 41, 84, 371, 737
Hpy188III TCNNGA 1 cut(s) 563
Hpy8I GTNNAC 2 cut(s) 438, 798
Hpy99I CGWCG 1 cut(s) 104
HpyAV CCTTC 3 cut(s) 289, 342, 615
HpyCH4III ACNGT 3 cut(s) 712, 778, 956
HpyCH4IV ACGT 1 cut(s) 366
HpyCH4V TGCA 6 cut(s) 72, 508, 645, 660, 760, 773
HpyF10VI GCNNNNNNNGC 2 cut(s) 14, 69
HpyF3I CTNAG 6 cut(s) 38, 81, 142, 420, 557, 674
HpySE526I ACGT 1 cut(s) 366
Hsp92I GRCGYC 1 cut(s) 102
Hsp92II CATG 8 cut(s) 27, 497, 773, 794, 950, 1039, 1051, 1101
HspAI GCGC 2 cut(s) 459, 1089
KroI GCCGGC 1 cut(s) 104
KroNI GCCGGC 1 cut(s) 106
Kzo9I GATC 2 cut(s) 445, 481
LmnI GCTCC 5 cut(s) 77, 169, 625, 759, 893
Lsp1109I GCAGC 4 cut(s) 56, 84, 211, 835
LweI GCATC 2 cut(s) 755, 1007
MaeI CTAG 1 cut(s) 608
MaeII ACGT 1 cut(s) 366
MaeIII GTNAC 4 cut(s) 415, 725, 841, 950
MalI GATC 2 cut(s) 447, 483
MboI GATC 2 cut(s) 445, 481
MboII GAAGA 6 cut(s) 183, 404, 443, 552, 712, 992
MfeI CAATTG 1 cut(s) 1041
MflI RGATCY 1 cut(s) 481
MhlI GDGCHC 2 cut(s) 82, 166
MluCI AATT 5 cut(s) 258, 330, 690, 877, 1041
MlyI GAGTC 4 cut(s) 30, 347, 568, 1064
MmeI TCCRAC 3 cut(s) 379, 715, 1009
MroNI GCCGGC 1 cut(s) 104
MseI TTAA 2 cut(s) 266, 594
MslI CAYNNNNRTG 4 cut(s) 22, 308, 531, 1013
MspA1I CMGCKG 2 cut(s) 75, 848
MspI CCGG 5 cut(s) 53, 105, 168, 852, 963
MspR9I CCNGG 4 cut(s) 168, 318, 891, 1020
MunI CAATTG 1 cut(s) 1041
MvaI CCWGG 3 cut(s) 318, 891, 1020
MwoI GCNNNNNNNGC 2 cut(s) 14, 69
NaeI GCCGGC 1 cut(s) 106
NciI CCSGG 1 cut(s) 168
NcoI CCATGG 1 cut(s) 23
NdeII GATC 2 cut(s) 445, 481
NgoMIV GCCGGC 1 cut(s) 104
NlaIII CATG 8 cut(s) 27, 497, 773, 794, 950, 1039, 1051, 1101
NlaIV GGNNCC 6 cut(s) 165, 315, 483, 627, 767, 1033
NmeAIII GCCGAG 1 cut(s) 1052
NmuCI GTSAC 1 cut(s) 841
NspI RCATGY 1 cut(s) 794
OliI CACNNNNGTG 1 cut(s) 1013
PdiI GCCGGC 1 cut(s) 106
PfeI GAWTC 1 cut(s) 402
PflMI CCANNNNNTGG 1 cut(s) 1019
PfoI TCCNGGA 1 cut(s) 316
PkrI GCNGC 4 cut(s) 71, 74, 226, 850
PleI GAGTC 4 cut(s) 30, 347, 567, 1064
PpsI GAGTC 4 cut(s) 30, 347, 567, 1064
PshAI GACNNNNGTC 1 cut(s) 365
PshBI ATTAAT 1 cut(s) 594
Psp124BI GAGCTC 1 cut(s) 82
Psp6I CCWGG 3 cut(s) 316, 889, 1018
PspEI GGTNACC 1 cut(s) 950
PspGI CCWGG 3 cut(s) 316, 889, 1018
PspN4I GGNNCC 6 cut(s) 165, 315, 483, 627, 767, 1033
PspPI GGNCC 4 cut(s) 340, 868, 931, 1031
PstI CTGCAG 2 cut(s) 74, 762
PstNI CAGNNNCTG 2 cut(s) 69, 1019
PsuI RGATCY 1 cut(s) 481
PvuII CAGCTG 1 cut(s) 848
RsaI GTAC 2 cut(s) 439, 789
RsaNI GTAC 2 cut(s) 438, 788
RseI CAYNNNNRTG 4 cut(s) 22, 308, 531, 1013
SacI GAGCTC 1 cut(s) 82
SaqAI TTAA 2 cut(s) 266, 594
SatI GCNGC 4 cut(s) 70, 73, 225, 849
Sau3AI GATC 2 cut(s) 445, 481
Sau96I GGNCC 4 cut(s) 340, 868, 931, 1031
SchI GAGTC 4 cut(s) 30, 347, 568, 1064
ScrFI CCNGG 4 cut(s) 168, 318, 891, 1020
SduI GDGCHC 2 cut(s) 82, 166
SfaNI GCATC 2 cut(s) 755, 1007
SfcI CTRYAG 2 cut(s) 70, 758
SinI GGWCC 3 cut(s) 868, 931, 1031
SmiMI CAYNNNNRTG 4 cut(s) 22, 308, 531, 1013
SmlI CTYRAG 2 cut(s) 91, 199
SmoI CTYRAG 2 cut(s) 91, 199
Sse9I AATT 5 cut(s) 258, 330, 690, 877, 1041
SsiI CCGC 6 cut(s) 28, 56, 75, 251, 695, 991
SspMI CTAG 1 cut(s) 608
SstI GAGCTC 1 cut(s) 82
StyD4I CCNGG 4 cut(s) 166, 316, 889, 1018
StyI CCWWGG 2 cut(s) 23, 651
TaaI ACNGT 3 cut(s) 712, 778, 956
TaiI ACGT 1 cut(s) 369
TaqI TCGA 4 cut(s) 245, 474, 576, 906
TasI AATT 5 cut(s) 258, 330, 690, 877, 1041
TatI WGTACW 2 cut(s) 437, 787
TfiI GAWTC 1 cut(s) 402
Tru1I TTAA 2 cut(s) 266, 594
Tru9I TTAA 2 cut(s) 266, 594
TscAI CASTG 5 cut(s) 178, 283, 756, 993, 1020
TseFI GTSAC 1 cut(s) 841
TseI GCWGC 4 cut(s) 69, 72, 224, 848
Tsp45I GTSAC 1 cut(s) 841
TspDTI ATGAA 4 cut(s) 270, 308, 482, 625
TspGWI ACGGA 2 cut(s) 48, 860
TspRI CASTG 5 cut(s) 178, 283, 756, 993, 1020
Van91I CCANNNNNTGG 1 cut(s) 1019
VpaK11BI GGWCC 3 cut(s) 868, 931, 1031
VspI ATTAAT 1 cut(s) 594
XceI RCATGY 1 cut(s) 794
XspI CTAG 1 cut(s) 608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.