Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0003432

Physical Location & Seq

Genomic Coordinates Reverse (-)

31072064 .. 31076790

Gene Structure 4727 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1231000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGAGCCATTAAATCAGAAGTCTCTGGAGAGAGCTGTTTCACAGAAGGCTTTGCAAATGGGGAGTTCATTTCCTTGTCAAATTTGTGTGGTGGGTTTTCTGTGTGGAGTTTGCCTCACTTCTCTCTTTCTTGCTGCACTCACTTCCCTTGGTACTTTTGAGTATGGTGGCCTTTCGTTTTCGTCGATTTCTGAGGGTTCTTCAGCTGGGAATTCAAGCTCAGAGTTCATCAATGTGGTTACAGGCACAAACTGCAGTTCAAAACGGCAAATCAGAACAGCGAAAAAAGTTGATTCACTGAGAAGTGAAGAAATGATCAGTGATGAGAGAGTCACATTACTGTATTCGGCTTGGAGTGCTTTACTAAATGAATCAGATTCCGGAGAGAGAGACCTCTTTCAGAGACTTGGAGTAAGCAGATCAAGTATTCCAAATGCCCCACATTTGGAAAACTGCAAGTTGAAAGCACAAGTAAATGAGCGCCTTGATAAGCATGCGGAGAACGAGAAGTATCCTCCTTGGACAAGTTGGAAGGGATTGTTGGACAGGTACCCTGCAGCTGCAACTAATGAGCAGTCAAGATACTTTAGGCATCAAGATATATCCGAAGGTGCCTACGCTCCCTGGATTACAGGGTCCGATGAAGAAAATTATCCCTTGACACGAAAAGTGCAACGAGACATATGGATGCATCAGCATCCTTTGAACTGCAGCGACCCTAGCGTAAAATTTCTTGTAGCTGACTGGGAAAGATTACCAGGATTTGGCATTGGAGCACAGATCGCCGGAATGTGTGGGCTTCTAGCTATTGCAATCAATGAAAACAGGGTCCTTGTCACCAACTACTACAATCGAGCTGACCATGATGGTTGTAAAGGTTCGTCCCGCTCCAGTTGGTCTTGCTACTTCTTTCCAGAAACATCCATACAATGTCGAAATCGTGCTTTTGAGCTTATGGGAAGTGAAGAAGCCTGGAAAAAAGGCACCATTACAGCAAAAGAAAGTTATAACTCAAAGCAAATATGGGTTGGACCTACACCCAAAATATGGGGCGATCCATGGAGTCATTTGCAACCTACGACAGAAATAAATGGGAGTTTGGTTGCTTATCATCGCAAAATGGACCGGAGGTGGTGGAGAGCACAGGCGGTACGATACTTGATGAGATTTCAAACGGAGTACACATGCGGCTTATTGAATGTTGCCCGCCATGCTGCATTTGGAAGGGAATCTGCCCATATGGTCATCAGAAGTTTTGACGGAAAATGGCCTAAGGATGTTACAATCGACCCAAGGTCTGATATCGAAGAATTTGTTTGGTCTAGTCACAAGCCGTGGATGCCTCAGCCACTCCTTAGCATGCACGTGAGAATGGGAGACAAAGCGTGCGAAATGAAGGTGGTGGAGTTCGAAGAATACATGGGTCTTGCTGGCCGAATAAGAAAGCGCTTCCCGCAGCTCAAGAGTGTGTGGCTCTCTACTGAAATGCAGGAAGTGATAGACAAATCCAAAAGTTACCGTCACTGGGACTTCTACTACACGAACGTGACCCGTCAAGTGGGGAACTCGACAATGGCTGCTTACGAAACGAGTCTTGGAAGGGAGACTAGCACGAACTATCCGATTGTTAATTTCTTGATGGCAAGTGAAGCTGACTTTTTCATTGGAGCACTGGGTTCAACTTGGTGCTTCCTTATCGATGGAATGAGAAACACCGGCGGGAAGGTTATGGCCGGATACTTAAGCGTTAACAAGGACCGGTTCTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

590

Amino Acids

66.99

Weight (kDa)

8.4

Isoelectric Point (pI)

38.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003432)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G28910 AT5G28910 AT5G28960
fragaria_vesca	FvH4_6g01760 FvH4_6g01760 FvH4_6g01760 FvH4_6g01760 FvH4_6g01760 FvH4_6g01760 FvH4_6g01760 FvH4_6g01760 FvH4_6g01760
malus_domestica	MD04G1231000.v1.1 MD12G1249300.v1.1
prunus_persica	Prupe.6G350700_v2.0.a1 Prupe.6G350700_v2.0.a1 Prupe.6G350700_v2.0.a1 Prupe.6G350700_v2.0.a1 Prupe.6G350700_v2.0.a1 Prupe.6G350700_v2.0.a1 Prupe.6G350700_v2.0.a1
pyrus_communis	pycom04g20460
rosa_chinensis	RchiOBHm_Chr3g0449501
rosa_laevigata	RLG00000025821
rosa_multiflora	Rmu_co8438485.1_g000001 Rmu_sc0000430.1_g000017
rosa_roxburghii	Rroxscaffold_6G00427460
rosa_rugosa	Rorug02G0621800 Rorug02G0621900 Rorug02G0622000 Rorug02G0622000
rosa_samantha	Rh3AG019900 Rh3BG019900 Rh3CG018600 Rh3DG019900
rosa_wichuraiana	Rw3G001580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1008
Acc65I	GGTACC	1 cut(s)	549
AccB1I	GGYRCC	3 cut(s)	549, 611, 983
AccB7I	CCANNNNNTGG	2 cut(s)	764, 1047
AccBSI	CCGCTC	1 cut(s)	888
AccIII	TCCGGA	1 cut(s)	380
AciI	CCGC	7 cut(s)	497, 886, 1148, 1188, 1207, 1454, 1719
AclWI	GGATC	1 cut(s)	1049
AcoI	YGGCCR	2 cut(s)	1432, 1731
AcsI	RAATTY	4 cut(s)	81, 211, 728, 1310
AcuI	CTGAAG	1 cut(s)	186
AcvI	CACGTG	1 cut(s)	1366
AfaI	GTAC	4 cut(s)	154, 551, 1152, 1181
AfeI	AGCGCT	1 cut(s)	1448
AfiI	CCNNNNNNNGG	5 cut(s)	445, 764, 1047, 1525, 1558
AflII	CTTAAG	1 cut(s)	1741
AgeI	ACCGGT	1 cut(s)	1758
AgsI	TTSAA	7 cut(s)	216, 261, 463, 706, 1172, 1198, 1680
AhdI	GACNNNNNGTC	1 cut(s)	1294
AjnI	CCWGG	3 cut(s)	623, 757, 971
AjuI	GAANNNNNNNTTGG	4 cut(s)	524, 556, 1578, 1610
AleI	CACNNNNGTG	1 cut(s)	1544
Alw21I	GWGCWC	3 cut(s)	778, 1144, 1672
Alw26I	GTCTC	6 cut(s)	27, 384, 397, 672, 1371, 1598
AlwI	GGATC	1 cut(s)	1049
Aor13HI	TCCGGA	1 cut(s)	380
Aor51HI	AGCGCT	1 cut(s)	1448
AoxI	GGCC	4 cut(s)	169, 1268, 1432, 1731
ApeKI	GCWGC	7 cut(s)	134, 557, 560, 711, 1214, 1456, 1577
ApoI	RAATTY	4 cut(s)	81, 211, 728, 1310
AsiGI	ACCGGT	1 cut(s)	1758
Asp718I	GGTACC	1 cut(s)	549
AspLEI	GCGC	2 cut(s)	483, 1449
AspS9I	GGNCC	5 cut(s)	636, 829, 1031, 1123, 1756
AsuHPI	GGTGA	1 cut(s)	829
AsuII	TTCGAA	1 cut(s)	1410
AvaII	GGWCC	5 cut(s)	636, 829, 1031, 1123, 1756
AxyI	CCTNAGG	1 cut(s)	1272
BanI	GGYRCC	3 cut(s)	549, 611, 983
BbrPI	CACGTG	1 cut(s)	1366
Bbv12I	GWGCWC	3 cut(s)	778, 1144, 1672
BbvCI	CCTCAGC	1 cut(s)	1344
BbvI	GCAGC	7 cut(s)	121, 547, 569, 723, 1201, 1468, 1564
BccI	CCATC	3 cut(s)	860, 1633, 1694
BceAI	ACGGC	2 cut(s)	281, 1318
BciT130I	CCWGG	3 cut(s)	625, 759, 973
BciVI	GTATCC	2 cut(s)	522, 1730
BclI	TGATCA	1 cut(s)	315
BcoDI	GTCTC	6 cut(s)	27, 384, 397, 672, 1371, 1598
BfaI	CTAG	4 cut(s)	720, 803, 1323, 1608
BfmI	CTRYAG	3 cut(s)	253, 555, 709
BfoI	RGCGCY	2 cut(s)	484, 1450
BfrI	CTTAAG	1 cut(s)	1741
BfuI	GTATCC	2 cut(s)	522, 1730
BisI	GCNGC	8 cut(s)	135, 558, 561, 712, 1189, 1215, 1457, 1578
BlsI	GCNGC	8 cut(s)	136, 559, 562, 713, 1190, 1216, 1458, 1579
Bme1390I	CCNGG	3 cut(s)	625, 759, 973
Bme18I	GGWCC	5 cut(s)	636, 829, 1031, 1123, 1756
BmeRI	GACNNNNNGTC	1 cut(s)	1294
BmgT120I	GGNCC	5 cut(s)	636, 829, 1031, 1123, 1756
BmiI	GGNNCC	6 cut(s)	6, 551, 613, 637, 830, 985
BmrFI	CCNGG	3 cut(s)	625, 759, 973
BmrI	ACTGGG	3 cut(s)	754, 1534, 1682
BmsI	GCATC	5 cut(s)	601, 678, 700, 706, 1329
BmuI	ACTGGG	3 cut(s)	754, 1534, 1682
BplI	GAGNNNNNCTC	2 cut(s)	99, 131
BpmI	CTGGAG	2 cut(s)	47, 874
Bpu10I	CCTNAGC	2 cut(s)	1344, 1355
Bpu14I	TTCGAA	1 cut(s)	1410
BpuEI	CTTGAG	1 cut(s)	1445
Bsa29I	ATCGAT	1 cut(s)	1698
BsaAI	YACGTR	1 cut(s)	1366
BsaI	GGTCTC	1 cut(s)	384
BsaJI	CCNNGG	6 cut(s)	148, 518, 623, 1058, 1292, 1334
BsaWI	WCCGGW	3 cut(s)	380, 1125, 1758
Bsc4I	CCNNNNNNNGG	5 cut(s)	445, 764, 1047, 1525, 1558
Bse118I	RCCGGY	2 cut(s)	1715, 1758
Bse1I	ACTGG	4 cut(s)	749, 891, 1529, 1677
Bse21I	CCTNAGG	1 cut(s)	1272
BseAI	TCCGGA	1 cut(s)	380
BseBI	CCWGG	3 cut(s)	625, 759, 973
BseCI	ATCGAT	1 cut(s)	1698
BseDI	CCNNGG	6 cut(s)	148, 518, 623, 1058, 1292, 1334
BseGI	GGATG	5 cut(s)	693, 697, 920, 1282, 1344
BseLI	CCNNNNNNNGG	5 cut(s)	445, 764, 1047, 1525, 1558
BseMII	CTCAG	4 cut(s)	183, 234, 290, 1358
BseNI	ACTGG	4 cut(s)	749, 891, 1529, 1677
BseXI	GCAGC	7 cut(s)	121, 547, 569, 723, 1201, 1468, 1564
BseYI	CCCAGC	1 cut(s)	206
BsgI	GTGCAG	1 cut(s)	120
BshFI	GGCC	4 cut(s)	171, 1270, 1434, 1733
BshNI	GGYRCC	3 cut(s)	549, 611, 983
BshTI	ACCGGT	1 cut(s)	1758
BshVI	ATCGAT	1 cut(s)	1698
BsiHKAI	GWGCWC	3 cut(s)	778, 1144, 1672
BsiSI	CCGG	6 cut(s)	381, 786, 1126, 1716, 1734, 1759
BslFI	GGGAC	2 cut(s)	868, 1541
BslI	CCNNNNNNNGG	5 cut(s)	445, 764, 1047, 1525, 1558
BsmAI	GTCTC	6 cut(s)	27, 384, 397, 672, 1371, 1598
BsmFI	GGGAC	2 cut(s)	868, 1541
BsnI	GGCC	4 cut(s)	171, 1270, 1434, 1733
Bso31I	GGTCTC	1 cut(s)	384
Bsp119I	TTCGAA	1 cut(s)	1410
Bsp1286I	GDGCHC	3 cut(s)	778, 1144, 1672
Bsp13I	TCCGGA	1 cut(s)	380
Bsp143I	GATC	4 cut(s)	315, 419, 780, 1054
Bsp19I	CCATGG	1 cut(s)	1058
BspACI	CCGC	7 cut(s)	497, 886, 1148, 1188, 1207, 1454, 1719
BspANI	GGCC	4 cut(s)	171, 1270, 1434, 1733
BspCNI	CTCAG	4 cut(s)	184, 233, 291, 1357
BspDI	ATCGAT	1 cut(s)	1698
BspEI	TCCGGA	1 cut(s)	380
BspLI	GGNNCC	6 cut(s)	6, 551, 613, 637, 830, 985
BspMAI	CTGCAG	3 cut(s)	257, 559, 713
BspPI	GGATC	1 cut(s)	1049
BspT104I	TTCGAA	1 cut(s)	1410
BspT107I	GGYRCC	3 cut(s)	549, 611, 983
BspTI	CTTAAG	1 cut(s)	1741
BspTNI	GGTCTC	1 cut(s)	384
BsrBI	CCGCTC	1 cut(s)	888
BsrFI	RCCGGY	2 cut(s)	1715, 1758
BsrI	ACTGG	4 cut(s)	749, 891, 1529, 1677
BssAI	RCCGGY	2 cut(s)	1715, 1758
BssECI	CCNNGG	6 cut(s)	148, 518, 623, 1058, 1292, 1334
BssMI	GATC	4 cut(s)	315, 419, 780, 1054
BssT1I	CCWWGG	4 cut(s)	148, 518, 1058, 1292
Bst2UI	CCWGG	3 cut(s)	625, 759, 973
Bst4CI	ACNGT	2 cut(s)	342, 1520
BstAFI	CTTAAG	1 cut(s)	1741
BstAPI	GCANNNNNTGC	1 cut(s)	252
BstBAI	YACGTR	1 cut(s)	1366
BstBI	TTCGAA	1 cut(s)	1410
BstC8I	GCNNGC	5 cut(s)	495, 1207, 1361, 1387, 1432
BstDEI	CTNAG	6 cut(s)	192, 220, 299, 1272, 1344, 1355
BstDSI	CCRYGG	2 cut(s)	1058, 1334
BstF5I	GGATG	5 cut(s)	693, 697, 920, 1282, 1344
BstH2I	RGCGCY	2 cut(s)	484, 1450
BstHHI	GCGC	2 cut(s)	483, 1449
BstKTI	GATC	4 cut(s)	318, 422, 783, 1057
BstMAI	GTCTC	6 cut(s)	27, 384, 397, 672, 1371, 1598
BstMBI	GATC	4 cut(s)	315, 419, 780, 1054
BstMWI	GCNNNNNNNGC	8 cut(s)	252, 356, 720, 782, 1211, 1339, 1453, 1649
BstNI	CCWGG	3 cut(s)	625, 759, 973
BstNSI	RCATGY	3 cut(s)	497, 1188, 1363
BstSCI	CCNGG	3 cut(s)	623, 757, 971
BstSFI	CTRYAG	3 cut(s)	253, 555, 709
BstV1I	GCAGC	7 cut(s)	121, 547, 569, 723, 1201, 1468, 1564
Bsu15I	ATCGAT	1 cut(s)	1698
Bsu36I	CCTNAGG	1 cut(s)	1272
BsuI	GTATCC	2 cut(s)	522, 1730
BsuRI	GGCC	4 cut(s)	171, 1270, 1434, 1733
BsuTUI	ATCGAT	1 cut(s)	1698
BtgI	CCRYGG	2 cut(s)	1058, 1334
BtgZI	GCGATG	1 cut(s)	1097
BtsCI	GGATG	5 cut(s)	693, 697, 920, 1282, 1344
BtsIMutI	CAGTG	4 cut(s)	296, 325, 1522, 1670
Cac8I	GCNNGC	5 cut(s)	495, 1207, 1361, 1387, 1432
CfoI	GCGC	2 cut(s)	483, 1449
Cfr10I	RCCGGY	2 cut(s)	1715, 1758
Cfr13I	GGNCC	5 cut(s)	636, 829, 1031, 1123, 1756
ClaI	ATCGAT	1 cut(s)	1698
Csp6I	GTAC	4 cut(s)	153, 550, 1151, 1180
CspAI	ACCGGT	1 cut(s)	1758
CviAII	CATG	7 cut(s)	494, 863, 1059, 1185, 1211, 1360, 1420
CviQI	GTAC	4 cut(s)	153, 550, 1151, 1180
DdeI	CTNAG	6 cut(s)	192, 220, 299, 1272, 1344, 1355
DpnI	GATC	4 cut(s)	317, 421, 782, 1056
DpnII	GATC	4 cut(s)	315, 419, 780, 1054
DriI	GACNNNNNGTC	1 cut(s)	1294
EaeI	YGGCCR	2 cut(s)	1432, 1731
Eam1105I	GACNNNNNGTC	1 cut(s)	1294
Eco130I	CCWWGG	4 cut(s)	148, 518, 1058, 1292
Eco31I	GGTCTC	1 cut(s)	384
Eco32I	GATATC	1 cut(s)	1303
Eco47I	GGWCC	5 cut(s)	636, 829, 1031, 1123, 1756
Eco47III	AGCGCT	1 cut(s)	1448
Eco57I	CTGAAG	1 cut(s)	186
Eco72I	CACGTG	1 cut(s)	1366
Eco81I	CCTNAGG	1 cut(s)	1272
EcoO109I	RGGNCCY	1 cut(s)	829
EcoRI	GAATTC	1 cut(s)	211
EcoRII	CCWGG	3 cut(s)	623, 757, 971
EcoRV	GATATC	1 cut(s)	1303
EcoT14I	CCWWGG	4 cut(s)	148, 518, 1058, 1292
EcoT22I	ATGCAT	1 cut(s)	693
ErhI	CCWWGG	4 cut(s)	148, 518, 1058, 1292
FaeI	CATG	7 cut(s)	497, 866, 1062, 1188, 1214, 1363, 1423
FaqI	GGGAC	2 cut(s)	868, 1541
FatI	CATG	7 cut(s)	493, 862, 1058, 1184, 1210, 1359, 1419
FauI	CCCGC	4 cut(s)	893, 1214, 1461, 1712
FauNDI	CATATG	2 cut(s)	683, 1239
FbaI	TGATCA	1 cut(s)	315
Fnu4HI	GCNGC	8 cut(s)	135, 558, 561, 712, 1189, 1215, 1457, 1578
FokI	GGATG	5 cut(s)	684, 700, 907, 1289, 1351
Fsp4HI	GCNGC	8 cut(s)	135, 558, 561, 712, 1189, 1215, 1457, 1578
FspBI	CTAG	4 cut(s)	720, 803, 1323, 1608
GlaI	GCGC	2 cut(s)	482, 1448
GluI	GCNGC	8 cut(s)	135, 558, 561, 712, 1189, 1215, 1457, 1578
GsaI	CCCAGC	1 cut(s)	210
GsuI	CTGGAG	2 cut(s)	47, 874
HaeII	RGCGCY	2 cut(s)	484, 1450
HaeIII	GGCC	4 cut(s)	171, 1270, 1434, 1733
HapII	CCGG	6 cut(s)	381, 786, 1126, 1716, 1734, 1759
HhaI	GCGC	2 cut(s)	483, 1449
Hin1II	CATG	7 cut(s)	497, 866, 1062, 1188, 1214, 1363, 1423
Hin6I	GCGC	2 cut(s)	481, 1447
HinP1I	GCGC	2 cut(s)	481, 1447
HincII	GTYRAC	1 cut(s)	1750
HindII	GTYRAC	1 cut(s)	1750
HinfI	GANTC	7 cut(s)	293, 330, 371, 377, 1063, 1229, 1591
HpaI	GTTAAC	1 cut(s)	1750
HpaII	CCGG	6 cut(s)	381, 786, 1126, 1716, 1734, 1759
HphI	GGTGA	1 cut(s)	829
Hpy166II	GTNNAC	2 cut(s)	1182, 1750
Hpy188III	TCNNGA	7 cut(s)	26, 381, 579, 596, 914, 1462, 1636
Hpy8I	GTNNAC	2 cut(s)	1182, 1750
Hpy99I	CGWCG	1 cut(s)	187
HpyAV	CCTTC	7 cut(s)	40, 526, 602, 1218, 1390, 1593, 1717
HpyCH4III	ACNGT	2 cut(s)	342, 1520
HpyCH4IV	ACGT	2 cut(s)	1365, 1545
HpyF10VI	GCNNNNNNNGC	8 cut(s)	252, 356, 720, 782, 1211, 1339, 1453, 1649
HpyF3I	CTNAG	6 cut(s)	192, 220, 299, 1272, 1344, 1355
HpySE526I	ACGT	2 cut(s)	1365, 1545
Hsp92II	CATG	7 cut(s)	497, 866, 1062, 1188, 1214, 1363, 1423
HspAI	GCGC	2 cut(s)	481, 1447
Kpn2I	TCCGGA	1 cut(s)	380
KpnI	GGTACC	1 cut(s)	553
Ksp22I	TGATCA	1 cut(s)	315
KspAI	GTTAAC	1 cut(s)	1750
Kzo9I	GATC	4 cut(s)	315, 419, 780, 1054
LmnI	GCTCC	5 cut(s)	4, 625, 773, 893, 1667
Lsp1109I	GCAGC	7 cut(s)	121, 547, 569, 723, 1201, 1468, 1564
LweI	GCATC	5 cut(s)	601, 678, 700, 706, 1329
MaeI	CTAG	4 cut(s)	720, 803, 1323, 1608
MaeII	ACGT	2 cut(s)	1365, 1545
MaeIII	GTNAC	8 cut(s)	238, 331, 835, 1279, 1325, 1514, 1520, 1546
MalI	GATC	4 cut(s)	317, 421, 782, 1056
MbiI	CCGCTC	1 cut(s)	888
MboI	GATC	4 cut(s)	315, 419, 780, 1054
MboII	GAAGA	6 cut(s)	192, 320, 656, 977, 1319, 1424
MhlI	GDGCHC	3 cut(s)	778, 1144, 1672
MluCI	AATT	6 cut(s)	81, 211, 649, 728, 1310, 1630
MlyI	GAGTC	3 cut(s)	339, 1072, 1600
MmeI	TCCRAC	3 cut(s)	509, 522, 1009
MnlI	CCTC	6 cut(s)	125, 187, 404, 525, 1122, 1353
Mph1103I	ATGCAT	1 cut(s)	693
MroI	TCCGGA	1 cut(s)	380
MseI	TTAA	4 cut(s)	11, 1629, 1742, 1749
MslI	CAYNNNNRTG	4 cut(s)	233, 686, 1364, 1544
MspA1I	CMGCKG	2 cut(s)	206, 560
MspCI	CTTAAG	1 cut(s)	1741
MspI	CCGG	6 cut(s)	381, 786, 1126, 1716, 1734, 1759
MspR9I	CCNGG	3 cut(s)	625, 759, 973
MvaI	CCWGG	3 cut(s)	625, 759, 973
MwoI	GCNNNNNNNGC	8 cut(s)	252, 356, 720, 782, 1211, 1339, 1453, 1649
NcoI	CCATGG	1 cut(s)	1058
NdeI	CATATG	2 cut(s)	683, 1239
NdeII	GATC	4 cut(s)	315, 419, 780, 1054
NlaIII	CATG	7 cut(s)	497, 866, 1062, 1188, 1214, 1363, 1423
NlaIV	GGNNCC	6 cut(s)	6, 551, 613, 637, 830, 985
NmuCI	GTSAC	5 cut(s)	331, 835, 1325, 1520, 1546
NsiI	ATGCAT	1 cut(s)	693
NspI	RCATGY	3 cut(s)	497, 1188, 1363
NspV	TTCGAA	1 cut(s)	1410
OliI	CACNNNNGTG	1 cut(s)	1544
PaeI	GCATGC	2 cut(s)	497, 1363
PcsI	WCGNNNNNNNCGW	2 cut(s)	182, 1619
PfeI	GAWTC	4 cut(s)	293, 371, 377, 1229
PflMI	CCANNNNNTGG	2 cut(s)	764, 1047
PinAI	ACCGGT	1 cut(s)	1758
PkrI	GCNGC	8 cut(s)	136, 559, 562, 713, 1190, 1216, 1458, 1579
PleI	GAGTC	3 cut(s)	338, 1071, 1599
PmaCI	CACGTG	1 cut(s)	1366
PmlI	CACGTG	1 cut(s)	1366
PpsI	GAGTC	3 cut(s)	338, 1071, 1599
Ppu21I	YACGTR	1 cut(s)	1366
PpuMI	RGGWCCY	1 cut(s)	829
PsiI	TTATAA	1 cut(s)	1008
Psp5II	RGGWCCY	1 cut(s)	829
Psp6I	CCWGG	3 cut(s)	623, 757, 971
PspCI	CACGTG	1 cut(s)	1366
PspFI	CCCAGC	1 cut(s)	206
PspGI	CCWGG	3 cut(s)	623, 757, 971
PspN4I	GGNNCC	6 cut(s)	6, 551, 613, 637, 830, 985
PspPI	GGNCC	5 cut(s)	636, 829, 1031, 1123, 1756
PspPPI	RGGWCCY	1 cut(s)	829
PstI	CTGCAG	3 cut(s)	257, 559, 713
PvuII	CAGCTG	2 cut(s)	206, 560
RsaI	GTAC	4 cut(s)	154, 551, 1152, 1181
RsaNI	GTAC	4 cut(s)	153, 550, 1151, 1180
RseI	CAYNNNNRTG	4 cut(s)	233, 686, 1364, 1544
SaqAI	TTAA	4 cut(s)	11, 1629, 1742, 1749
SatI	GCNGC	8 cut(s)	135, 558, 561, 712, 1189, 1215, 1457, 1578
Sau3AI	GATC	4 cut(s)	315, 419, 780, 1054
Sau96I	GGNCC	5 cut(s)	636, 829, 1031, 1123, 1756
SchI	GAGTC	3 cut(s)	339, 1072, 1600
ScrFI	CCNGG	3 cut(s)	625, 759, 973
SduI	GDGCHC	3 cut(s)	778, 1144, 1672
SfaNI	GCATC	5 cut(s)	601, 678, 700, 706, 1329
SfcI	CTRYAG	3 cut(s)	253, 555, 709
SfuI	TTCGAA	1 cut(s)	1410
SgrAI	CRCCGGYG	1 cut(s)	1715
SinI	GGWCC	5 cut(s)	636, 829, 1031, 1123, 1756
SmiMI	CAYNNNNRTG	4 cut(s)	233, 686, 1364, 1544
SmlI	CTYRAG	2 cut(s)	1460, 1741
SmoI	CTYRAG	2 cut(s)	1460, 1741
SphI	GCATGC	2 cut(s)	497, 1363
Sse9I	AATT	6 cut(s)	81, 211, 649, 728, 1310, 1630
SsiI	CCGC	7 cut(s)	497, 886, 1148, 1188, 1207, 1454, 1719
SspMI	CTAG	4 cut(s)	720, 803, 1323, 1608
StyD4I	CCNGG	3 cut(s)	623, 757, 971
StyI	CCWWGG	4 cut(s)	148, 518, 1058, 1292
TaaI	ACNGT	2 cut(s)	342, 1520
TaiI	ACGT	2 cut(s)	1368, 1548
TaqI	TCGA	8 cut(s)	185, 853, 934, 1287, 1305, 1410, 1568, 1698
TasI	AATT	6 cut(s)	81, 211, 649, 728, 1310, 1630
TatI	WGTACW	1 cut(s)	1179
TauI	GCSGC	1 cut(s)	1191
TfiI	GAWTC	4 cut(s)	293, 371, 377, 1229
Tru1I	TTAA	4 cut(s)	11, 1629, 1742, 1749
Tru9I	TTAA	4 cut(s)	11, 1629, 1742, 1749
TscAI	CASTG	4 cut(s)	303, 325, 1529, 1677
TseFI	GTSAC	5 cut(s)	331, 835, 1325, 1520, 1546
TseI	GCWGC	7 cut(s)	134, 557, 560, 711, 1214, 1456, 1577
Tsp45I	GTSAC	5 cut(s)	331, 835, 1325, 1520, 1546
TspDTI	ATGAA	7 cut(s)	57, 217, 384, 657, 834, 1409, 1651
TspGWI	ACGGA	2 cut(s)	1190, 1275
TspRI	CASTG	4 cut(s)	303, 325, 1529, 1677
Van91I	CCANNNNNTGG	2 cut(s)	764, 1047
Vha464I	CTTAAG	1 cut(s)	1741
VpaK11BI	GGWCC	5 cut(s)	636, 829, 1031, 1123, 1756
XapI	RAATTY	4 cut(s)	81, 211, 728, 1310
XceI	RCATGY	3 cut(s)	497, 1188, 1363
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1217
XspI	CTAG	4 cut(s)	720, 803, 1323, 1608
Zsp2I	ATGCAT	1 cut(s)	693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.