Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0003432

Physical Location & Seq

Genomic Coordinates Forward (+)

1306071 .. 1309065

Gene Structure 2995 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G001580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGAACCATTAAATCAGAAGTCTATAGAGAGAGTGGTTTCACAGAAGGCTTTGCAAATGGGGAGTTCATTTCCATGTCAAATCTGTGTGGTGGGTTTGCTCTGTGGAATCTGTCTTACTTCTTTGTTTATGGCTGCTCTCACTTCATTTGGTACTTTTGAGTTTGGTGGGTTTTCGTTTTCGACCATAGCTGAGGGTTCTTCAGCTGGGCACTCAAGCTCAGAGTTCATCAACTGCAGTTCTGAACCAATGATAACACAGAGAGTGGTAGTCGATTCGCTTGGAAGTGAAGAAACCATCAATAGTGAGAGAGCCTCATTATTGTATTCAGCTTGGAGTGCTTTACTAACTGAATCAGATTCCGGAAAAAGTGATTACTTGCAGAGAAATGGACTAAACAGATCCAGTGTGCCAAACACCCCTCATTTGGAAAACTGCAAGTTGAAAGGACAAGTACACAAGCGCCTTGATAAACATCCCGAGAATGAGAGCCATCCAACAGCTGCAACAAATGAGCAGTCTAGCTATTTTAGTAATCAAGCTATGTCTGAAGCTGCTTATGCTCCTTGGATTACAGGGTCTGATGAAGAAAATTACCCGTCAACACGAAAAGTGCAACGAGACATATGGCTGCATCAGCATCCTTTGAACTGCAGGGATCCTAGTGTAAAGTTTCTCGTAGCTGACTGGGAAAGATTACCTGGATTGGGTATTGGAGGCCAGATTGCTGGAATGTGTGGAGTTCTTGCTATAGCAATGAAGGAAAAAAGGGTCCTTGTTACCAACTACTTTAATCGAGCTGACCATGATGGTTGCAAAGGTTCGTCCCGCTCCAGTTGGTCCTGTTATTTTTTCCCAGAAACATCTCTAGAATGTCGAAATCGTGCATTGGAGCTTATAGAAAGTGAAGATGCCTGGAAAAGTGGCACCATCAAGGCAAAAGATAATTATACTTCAAAGGAAATATGGGCTGGACGAACACCTAGAATATGGGGTGATCCTTGGAGTCATTTGCAACCAACAACAGAAATAAATGGGACTTTGATTGCTTATCATCGCAAAATGGATCGAAGGTGGTGGCGAGCACAGGCAGTACGATACTTGATGCGATTTCAAACCGAGTACACATGTGACTTGCTGAATGTTGCTCGCCATGCGGCATTTGGAAAGCAAGCTGCCGATATGGTAGTCAGAAATTTCGAGGGGGAATGGTCCAAGGATGTTACAGTGAATGAAAGGTCAGATATTGAAGAGTTTGTTTGGTCTAATCACAAGCCATGGATGCCTAGGCCACTACTGAGCATGCATGTAAGGATGGGAGACAAAGCATGTGAAATGAAGGTAGTTGAATTTCAAGAATACATGAGTCTTGCTGGCCGCATTAGAAAGCGATTTCCACAGCTCAACAGTGTTTGGCTTTCCACTGAAATGCAGGAAGTGATTGATAAATCTAAAGGATACCCTCATTGGGACTTCTACTACACAAATGTGACACGTCAAGTGGGAAACATGACAATGGCTGCTTATGAAACAAGTCTTGGTAGAAAAACCAGCACGAACTACCCGCTTGTCAATTTCTTGATGGCAACCGAAGCTGACTTTTTCATTGGAGCGTTGGGTTCTACTTGGTGCTTCCTTATAGATGGAATGAGAAACACCGGAGGGAAAGTTATGGCTGGATATTTGAGTGTCAACAAGGACCGTTTCTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

570

Amino Acids

64.65

Weight (kDa)

7.19

Isoelectric Point (pI)

41.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003432)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G28910 AT5G28910 AT5G28960
fragaria_vesca	FvH4_6g01760 FvH4_6g01760 FvH4_6g01760 FvH4_6g01760 FvH4_6g01760 FvH4_6g01760 FvH4_6g01760 FvH4_6g01760 FvH4_6g01760
malus_domestica	MD04G1231000.v1.1 MD12G1249300.v1.1
prunus_persica	Prupe.6G350700_v2.0.a1 Prupe.6G350700_v2.0.a1 Prupe.6G350700_v2.0.a1 Prupe.6G350700_v2.0.a1 Prupe.6G350700_v2.0.a1 Prupe.6G350700_v2.0.a1 Prupe.6G350700_v2.0.a1
pyrus_communis	pycom04g20460
rosa_chinensis	RchiOBHm_Chr3g0449501
rosa_laevigata	RLG00000025821
rosa_multiflora	Rmu_co8438485.1_g000001 Rmu_sc0000430.1_g000017
rosa_roxburghii	Rroxscaffold_6G00427460
rosa_rugosa	Rorug02G0621800 Rorug02G0621900 Rorug02G0622000 Rorug02G0622000
rosa_samantha	Rh3AG019900 Rh3BG019900 Rh3CG018600 Rh3DG019900
rosa_wichuraiana	Rw3G001580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	926
AccBSI	CCGCTC	1 cut(s)	831
AccIII	TCCGGA	1 cut(s)	362
AciI	CCGC	4 cut(s)	829, 1157, 1378, 1565
AclWI	GGATC	5 cut(s)	396, 653, 666, 992, 1074
AcoI	YGGCCR	1 cut(s)	1375
AcsI	RAATTY	2 cut(s)	1195, 1349
AcuI	CTGAAG	2 cut(s)	186, 570
AfaI	GTAC	4 cut(s)	154, 456, 1095, 1124
AfiI	CCNNNNNNNGG	3 cut(s)	427, 707, 1468
AflIII	ACRYGT	2 cut(s)	1127, 1493
AgsI	TTSAA	7 cut(s)	445, 649, 957, 1115, 1250, 1349, 1355
AjiI	CACGTC	1 cut(s)	1496
AjnI	CCWGG	2 cut(s)	700, 914
AjuI	GAANNNNNNNTTGG	2 cut(s)	1521, 1553
AleI	CACNNNNGTG	1 cut(s)	1487
Alw21I	GWGCWC	1 cut(s)	1087
Alw26I	GTCTC	2 cut(s)	615, 1314
AlwI	GGATC	5 cut(s)	396, 653, 666, 992, 1074
AlwNI	CAGNNNCTG	1 cut(s)	581
Ama87I	CYCGRG	1 cut(s)	479
Aor13HI	TCCGGA	1 cut(s)	362
AoxI	GGCC	3 cut(s)	718, 1289, 1375
ApeKI	GCWGC	6 cut(s)	134, 503, 554, 631, 1175, 1520
ApoI	RAATTY	2 cut(s)	1195, 1349
ArsI	GACNNNNNNTTYG	2 cut(s)	503, 535
AspA2I	CCTAGG	1 cut(s)	1286
AspLEI	GCGC	1 cut(s)	465
AspS9I	GGNCC	4 cut(s)	772, 840, 1212, 1699
AsuHPI	GGTGA	1 cut(s)	1007
AvaI	CYCGRG	1 cut(s)	479
AvaII	GGWCC	4 cut(s)	772, 840, 1212, 1699
AvrII	CCTAGG	1 cut(s)	1286
BaeGI	GKGCMC	1 cut(s)	213
BamHI	GGATCC	1 cut(s)	658
BanI	GGYRCC	1 cut(s)	926
Bbv12I	GWGCWC	1 cut(s)	1087
BbvCI	CCTCAGC	1 cut(s)	192
BbvI	GCAGC	6 cut(s)	121, 490, 541, 618, 1162, 1507
BccI	CCATC	7 cut(s)	305, 501, 803, 938, 1309, 1576, 1637
BciT130I	CCWGG	2 cut(s)	702, 916
BciVI	GTATCC	1 cut(s)	1451
BcoDI	GTCTC	2 cut(s)	615, 1314
BfaI	CTAG	5 cut(s)	522, 663, 869, 984, 1287
BfmI	CTRYAG	4 cut(s)	24, 235, 652, 750
BfoI	RGCGCY	1 cut(s)	466
BfuI	GTATCC	1 cut(s)	1451
BisI	GCNGC	8 cut(s)	135, 504, 555, 632, 1158, 1176, 1378, 1521
BlnI	CCTAGG	1 cut(s)	1286
BlsI	GCNGC	8 cut(s)	136, 505, 556, 633, 1159, 1177, 1379, 1522
Bme1390I	CCNGG	2 cut(s)	702, 916
Bme18I	GGWCC	4 cut(s)	772, 840, 1212, 1699
BmeT110I	CYCGRG	1 cut(s)	479
BmgBI	CACGTC	1 cut(s)	1496
BmgT120I	GGNCC	4 cut(s)	772, 840, 1212, 1699
BmiI	GGNNCC	4 cut(s)	6, 660, 773, 928
BmrFI	CCNGG	2 cut(s)	702, 916
BmrI	ACTGGG	1 cut(s)	697
BmsI	GCATC	5 cut(s)	643, 649, 901, 1095, 1272
BmuI	ACTGGG	1 cut(s)	697
BplI	GAGNNNNNCTC	2 cut(s)	299, 331
BpmI	CTGGAG	1 cut(s)	817
Bpu10I	CCTNAGC	1 cut(s)	192
BpuEI	CTTGAG	1 cut(s)	199
BsaBI	GATNNNNATC	1 cut(s)	474
BsaJI	CCNNGG	5 cut(s)	566, 1001, 1215, 1277, 1286
BsaWI	WCCGGW	2 cut(s)	362, 1658
BsaXI	ACNNNNNCTCC	2 cut(s)	1653, 1683
Bsc4I	CCNNNNNNNGG	3 cut(s)	427, 707, 1468
Bse1I	ACTGG	3 cut(s)	405, 692, 834
Bse3DI	GCAATG	1 cut(s)	762
Bse8I	GATNNNNATC	1 cut(s)	474
BseAI	TCCGGA	1 cut(s)	362
BseBI	CCWGG	2 cut(s)	702, 916
BseDI	CCNNGG	5 cut(s)	566, 1001, 1215, 1277, 1286
BseGI	GGATG	6 cut(s)	475, 493, 640, 1225, 1287, 1320
BseJI	GATNNNNATC	1 cut(s)	474
BseLI	CCNNNNNNNGG	3 cut(s)	427, 707, 1468
BseMI	GCAATG	1 cut(s)	762
BseMII	CTCAG	3 cut(s)	183, 234, 1289
BseNI	ACTGG	3 cut(s)	405, 692, 834
BseSI	GKGCMC	1 cut(s)	213
BseXI	GCAGC	6 cut(s)	121, 490, 541, 618, 1162, 1507
BseYI	CCCAGC	1 cut(s)	206
BshFI	GGCC	3 cut(s)	720, 1291, 1377
BshNI	GGYRCC	1 cut(s)	926
BsiHKAI	GWGCWC	1 cut(s)	1087
BsiHKCI	CYCGRG	1 cut(s)	479
BsiSI	CCGG	2 cut(s)	363, 1659
BslFI	GGGAC	3 cut(s)	811, 1051, 1484
BslI	CCNNNNNNNGG	3 cut(s)	427, 707, 1468
BsmAI	GTCTC	2 cut(s)	615, 1314
BsmFI	GGGAC	3 cut(s)	811, 1051, 1484
BsnI	GGCC	3 cut(s)	720, 1291, 1377
BsoBI	CYCGRG	1 cut(s)	479
Bsp1286I	GDGCHC	2 cut(s)	213, 1087
Bsp13I	TCCGGA	1 cut(s)	362
Bsp143I	GATC	4 cut(s)	401, 658, 997, 1066
Bsp19I	CCATGG	1 cut(s)	1277
BspACI	CCGC	4 cut(s)	829, 1157, 1378, 1565
BspANI	GGCC	3 cut(s)	720, 1291, 1377
BspCNI	CTCAG	3 cut(s)	184, 233, 1290
BspEI	TCCGGA	1 cut(s)	362
BspLI	GGNNCC	4 cut(s)	6, 660, 773, 928
BspMAI	CTGCAG	2 cut(s)	239, 656
BspPI	GGATC	5 cut(s)	396, 653, 666, 992, 1074
BspT107I	GGYRCC	1 cut(s)	926
BsrBI	CCGCTC	1 cut(s)	831
BsrDI	GCAATG	1 cut(s)	762
BsrI	ACTGG	3 cut(s)	405, 692, 834
BssECI	CCNNGG	5 cut(s)	566, 1001, 1215, 1277, 1286
BssMI	GATC	4 cut(s)	401, 658, 997, 1066
BssT1I	CCWWGG	5 cut(s)	566, 1001, 1215, 1277, 1286
Bst2UI	CCWGG	2 cut(s)	702, 916
Bst4CI	ACNGT	3 cut(s)	1228, 1409, 1703
Bst6I	CTCTTC	1 cut(s)	1245
BstC8I	GCNNGC	5 cut(s)	1083, 1150, 1173, 1304, 1375
BstDEI	CTNAG	3 cut(s)	192, 220, 1298
BstDSI	CCRYGG	1 cut(s)	1277
BstF5I	GGATG	6 cut(s)	475, 493, 640, 1225, 1287, 1320
BstH2I	RGCGCY	1 cut(s)	466
BstHHI	GCGC	1 cut(s)	465
BstKTI	GATC	4 cut(s)	404, 661, 1000, 1069
BstMAI	GTCTC	2 cut(s)	615, 1314
BstMBI	GATC	4 cut(s)	401, 658, 997, 1066
BstMWI	GCNNNNNNNGC	6 cut(s)	338, 560, 637, 1154, 1282, 1592
BstNI	CCWGG	2 cut(s)	702, 916
BstNSI	RCATGY	4 cut(s)	1131, 1306, 1310, 1332
BstSCI	CCNGG	2 cut(s)	700, 914
BstSFI	CTRYAG	4 cut(s)	24, 235, 652, 750
BstSLI	GKGCMC	1 cut(s)	213
BstV1I	GCAGC	6 cut(s)	121, 490, 541, 618, 1162, 1507
BstX2I	RGATCY	2 cut(s)	401, 658
BstXI	CCANNNNNNTGG	1 cut(s)	728
BstYI	RGATCY	2 cut(s)	401, 658
BsuI	GTATCC	1 cut(s)	1451
BsuRI	GGCC	3 cut(s)	720, 1291, 1377
BtgI	CCRYGG	1 cut(s)	1277
BtgZI	GCGATG	1 cut(s)	1040
BtrI	CACGTC	1 cut(s)	1496
BtsCI	GGATG	6 cut(s)	475, 493, 640, 1225, 1287, 1320
BtsIMutI	CAGTG	4 cut(s)	412, 1233, 1414, 1422
Cac8I	GCNNGC	5 cut(s)	1083, 1150, 1173, 1304, 1375
CaiI	CAGNNNCTG	1 cut(s)	581
CfoI	GCGC	1 cut(s)	465
Cfr13I	GGNCC	4 cut(s)	772, 840, 1212, 1699
Csp6I	GTAC	4 cut(s)	153, 455, 1094, 1123
CviQI	GTAC	4 cut(s)	153, 455, 1094, 1123
DdeI	CTNAG	3 cut(s)	192, 220, 1298
DpnI	GATC	4 cut(s)	403, 660, 999, 1068
DpnII	GATC	4 cut(s)	401, 658, 997, 1066
EaeI	YGGCCR	1 cut(s)	1375
Eam1104I	CTCTTC	1 cut(s)	1245
EarI	CTCTTC	1 cut(s)	1245
Eco130I	CCWWGG	5 cut(s)	566, 1001, 1215, 1277, 1286
Eco47I	GGWCC	4 cut(s)	772, 840, 1212, 1699
Eco57I	CTGAAG	2 cut(s)	186, 570
Eco88I	CYCGRG	1 cut(s)	479
EcoO109I	RGGNCCY	1 cut(s)	772
EcoRII	CCWGG	2 cut(s)	700, 914
EcoT14I	CCWWGG	5 cut(s)	566, 1001, 1215, 1277, 1286
EcoT22I	ATGCAT	1 cut(s)	1308
ErhI	CCWWGG	5 cut(s)	566, 1001, 1215, 1277, 1286
FaqI	GGGAC	3 cut(s)	811, 1051, 1484
FauI	CCCGC	2 cut(s)	836, 1572
FauNDI	CATATG	1 cut(s)	626
Fnu4HI	GCNGC	8 cut(s)	135, 504, 555, 632, 1158, 1176, 1378, 1521
FokI	GGATG	6 cut(s)	462, 480, 627, 1232, 1294, 1327
Fsp4HI	GCNGC	8 cut(s)	135, 504, 555, 632, 1158, 1176, 1378, 1521
FspBI	CTAG	5 cut(s)	522, 663, 869, 984, 1287
GlaI	GCGC	1 cut(s)	464
GluI	GCNGC	8 cut(s)	135, 504, 555, 632, 1158, 1176, 1378, 1521
GsaI	CCCAGC	1 cut(s)	210
GsuI	CTGGAG	1 cut(s)	817
HaeII	RGCGCY	1 cut(s)	466
HaeIII	GGCC	3 cut(s)	720, 1291, 1377
HapII	CCGG	2 cut(s)	363, 1659
HhaI	GCGC	1 cut(s)	465
Hin6I	GCGC	1 cut(s)	463
HinP1I	GCGC	1 cut(s)	463
HincII	GTYRAC	2 cut(s)	603, 1693
HindII	GTYRAC	2 cut(s)	603, 1693
HinfI	GANTC	6 cut(s)	108, 275, 353, 359, 1006, 1366
HpaII	CCGG	2 cut(s)	363, 1659
HphI	GGTGA	1 cut(s)	1007
Hpy166II	GTNNAC	4 cut(s)	457, 603, 1125, 1693
Hpy188I	TCNGA	8 cut(s)	18, 223, 244, 358, 550, 583, 1193, 1243
Hpy188III	TCNNGA	5 cut(s)	363, 479, 869, 1355, 1579
Hpy8I	GTNNAC	4 cut(s)	457, 603, 1125, 1693
HpyAV	CCTTC	4 cut(s)	40, 754, 1065, 1333
HpyCH4III	ACNGT	3 cut(s)	1228, 1409, 1703
HpyCH4IV	ACGT	1 cut(s)	1495
HpyF10VI	GCNNNNNNNGC	6 cut(s)	338, 560, 637, 1154, 1282, 1592
HpyF3I	CTNAG	3 cut(s)	192, 220, 1298
HpySE526I	ACGT	1 cut(s)	1495
HspAI	GCGC	1 cut(s)	463
Kpn2I	TCCGGA	1 cut(s)	362
Kzo9I	GATC	4 cut(s)	401, 658, 997, 1066
LmnI	GCTCC	4 cut(s)	568, 836, 892, 1610
Lsp1109I	GCAGC	6 cut(s)	121, 490, 541, 618, 1162, 1507
LweI	GCATC	5 cut(s)	643, 649, 901, 1095, 1272
MaeI	CTAG	5 cut(s)	522, 663, 869, 984, 1287
MaeII	ACGT	1 cut(s)	1495
MaeIII	GTNAC	4 cut(s)	778, 1130, 1222, 1489
MalI	GATC	4 cut(s)	403, 660, 999, 1068
MbiI	CCGCTC	1 cut(s)	831
MboI	GATC	4 cut(s)	401, 658, 997, 1066
MboII	GAAGA	5 cut(s)	192, 302, 599, 920, 1262
MflI	RGATCY	2 cut(s)	401, 658
MhlI	GDGCHC	2 cut(s)	213, 1087
MluCI	AATT	5 cut(s)	592, 946, 1195, 1349, 1573
MlyI	GAGTC	2 cut(s)	1015, 1375
MmeI	TCCRAC	1 cut(s)	521
MnlI	CCTC	7 cut(s)	187, 325, 432, 710, 1195, 1473, 1655
Mph1103I	ATGCAT	1 cut(s)	1308
MroI	TCCGGA	1 cut(s)	362
MseI	TTAA	2 cut(s)	11, 792
MslI	CAYNNNNRTG	4 cut(s)	73, 1427, 1487, 1514
MspA1I	CMGCKG	2 cut(s)	206, 503
MspI	CCGG	2 cut(s)	363, 1659
MspR9I	CCNGG	2 cut(s)	702, 916
MvaI	CCWGG	2 cut(s)	702, 916
MwoI	GCNNNNNNNGC	6 cut(s)	338, 560, 637, 1154, 1282, 1592
NcoI	CCATGG	1 cut(s)	1277
NdeI	CATATG	1 cut(s)	626
NdeII	GATC	4 cut(s)	401, 658, 997, 1066
NlaIV	GGNNCC	4 cut(s)	6, 660, 773, 928
NmuCI	GTSAC	2 cut(s)	1130, 1489
NsiI	ATGCAT	1 cut(s)	1308
NspI	RCATGY	4 cut(s)	1131, 1306, 1310, 1332
OliI	CACNNNNGTG	1 cut(s)	1487
PaeI	GCATGC	1 cut(s)	1306
PciI	ACATGT	1 cut(s)	1127
PfeI	GAWTC	4 cut(s)	108, 275, 353, 359
PkrI	GCNGC	8 cut(s)	136, 505, 556, 633, 1159, 1177, 1379, 1522
PleI	GAGTC	2 cut(s)	1014, 1374
PpsI	GAGTC	2 cut(s)	1014, 1374
PpuMI	RGGWCCY	1 cut(s)	772
PscI	ACATGT	1 cut(s)	1127
Psp5II	RGGWCCY	1 cut(s)	772
Psp6I	CCWGG	2 cut(s)	700, 914
PspFI	CCCAGC	1 cut(s)	206
PspGI	CCWGG	2 cut(s)	700, 914
PspN4I	GGNNCC	4 cut(s)	6, 660, 773, 928
PspPI	GGNCC	4 cut(s)	772, 840, 1212, 1699
PspPPI	RGGWCCY	1 cut(s)	772
PstI	CTGCAG	2 cut(s)	239, 656
PstNI	CAGNNNCTG	1 cut(s)	581
PsuI	RGATCY	2 cut(s)	401, 658
PvuII	CAGCTG	2 cut(s)	206, 503
RsaI	GTAC	4 cut(s)	154, 456, 1095, 1124
RsaNI	GTAC	4 cut(s)	153, 455, 1094, 1123
RseI	CAYNNNNRTG	4 cut(s)	73, 1427, 1487, 1514
SaqAI	TTAA	2 cut(s)	11, 792
SatI	GCNGC	8 cut(s)	135, 504, 555, 632, 1158, 1176, 1378, 1521
Sau3AI	GATC	4 cut(s)	401, 658, 997, 1066
Sau96I	GGNCC	4 cut(s)	772, 840, 1212, 1699
SchI	GAGTC	2 cut(s)	1015, 1375
ScrFI	CCNGG	2 cut(s)	702, 916
SduI	GDGCHC	2 cut(s)	213, 1087
SfaNI	GCATC	5 cut(s)	643, 649, 901, 1095, 1272
SfcI	CTRYAG	4 cut(s)	24, 235, 652, 750
SinI	GGWCC	4 cut(s)	772, 840, 1212, 1699
SmiMI	CAYNNNNRTG	4 cut(s)	73, 1427, 1487, 1514
SmlI	CTYRAG	1 cut(s)	214
SmoI	CTYRAG	1 cut(s)	214
SphI	GCATGC	1 cut(s)	1306
Sse9I	AATT	5 cut(s)	592, 946, 1195, 1349, 1573
SsiI	CCGC	4 cut(s)	829, 1157, 1378, 1565
SspMI	CTAG	5 cut(s)	522, 663, 869, 984, 1287
StyD4I	CCNGG	2 cut(s)	700, 914
StyI	CCWWGG	5 cut(s)	566, 1001, 1215, 1277, 1286
TaaI	ACNGT	3 cut(s)	1228, 1409, 1703
TaiI	ACGT	1 cut(s)	1498
TaqI	TCGA	6 cut(s)	182, 273, 796, 877, 1069, 1200
TasI	AATT	5 cut(s)	592, 946, 1195, 1349, 1573
TatI	WGTACW	2 cut(s)	454, 1122
TauI	GCSGC	2 cut(s)	1160, 1380
TfiI	GAWTC	4 cut(s)	108, 275, 353, 359
Tru1I	TTAA	2 cut(s)	11, 792
Tru9I	TTAA	2 cut(s)	11, 792
TscAI	CASTG	4 cut(s)	412, 1233, 1414, 1429
TseFI	GTSAC	2 cut(s)	1130, 1489
TseI	GCWGC	6 cut(s)	134, 503, 554, 631, 1175, 1520
Tsp45I	GTSAC	2 cut(s)	1130, 1489
TspDTI	ATGAA	9 cut(s)	57, 135, 217, 600, 773, 1248, 1352, 1542, 1594
TspRI	CASTG	4 cut(s)	412, 1233, 1414, 1429
VpaK11BI	GGWCC	4 cut(s)	772, 840, 1212, 1699
XapI	RAATTY	2 cut(s)	1195, 1349
XbaI	TCTAGA	1 cut(s)	868
XceI	RCATGY	4 cut(s)	1131, 1306, 1310, 1332
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1160
XmaJI	CCTAGG	1 cut(s)	1286
XspI	CTAG	5 cut(s)	522, 663, 869, 984, 1287
Zsp2I	ATGCAT	1 cut(s)	1308

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.