Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0011471

Physical Location & Seq

Genomic Coordinates Reverse (-)

32039533 .. 32043312

Gene Structure 3780 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1244100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1329 bp

ATGGACTTCGATGCCGGAATACCCATGTCTCGTGCTGCCGCGCCCGTCACCGACGCTCGCTCACTGTCAGCCTCCTTGACCCAAGATGCAATGTGGCAAATGAATATGAGATCAAGTGAAACAATGGAAGCCGGGCCCTATCCCGAGCGTGCTGGAGAGCCAGATTGTTCTTATTACATCAGAACAGGACTTTGTAGATTTGGGGCGACATGTCGCTTTAATCATCCACCTAACCGGAAGCTGGCTATTGCCGCTGCAAGGATGAAGGGAGAGTTCCCCGAAAGAATTGGACAACCAGAGTGTCAGTACTACCTGAAGACAGGAACCTGCAAGTTTGGAGCAACATGCAAGTTTCATCATCCTAGAGACAAGGCGGGAATTGCTGGAAGAGTTGCCTTAAATATCTTAGGCTATCCACTTCGACCGAATGAGGTCGAATGTGCTTATTATTTACGAACCGGACAATGCAAGTTTGGAAGCACTTGTAAATTCCACCATCCCCAACCTACTAATATGATGGTTTCAGTGGGCGGCTCTACTGTATATCCTACTGTCCAATCTCCAACTACTCCTGGCCAGCAATCGTATGCAGGAGGAATTACAAATTGGTCAAGAGCATCTTTTATTCCCAGTCCACGCTGGCAAGCTCAATCAAGTTACGCTCCTCTCATTGTTCCTCAAGGAGTGGTATCAGTCCCAGGATGGAACGCATACAGTGGCCAACTTGGCTCCGTTTCATCTCCAGAGGGTCAGCAACAAACAGCGGGAAACAGTCAGATGTATGGAACTTCACAACAAGGTGAACCGGAAAATTCAGGATCTCAAGGGGGCTTTTCTCCTTACGGTTCTGGTTCCATCCCTGTAGGGTTCTATGCATTGCAAAGGGAAAATGTATTTCCTGAGAGACCTGGCCAGCCTGAGTGCCAGTTTTATATGAAGACTGGGGATTGTAAGTTTGGTGGAGTCTGTAGATTCCATCATCCTAGGGAGAGGTTAATTCCTGCTCCAGACTGTGTTTTGAGTCCAATGGGCCTTCCTTTACGACCGGGAGAACCGTTGTGCATCTTCTATTCTCGTTATGGTATCTGTAAGTTTGGACCAAGTTGCAAGTTCAACCACCCTATGGGTATCTTCACTTATAATCTCTCTGCATCATCTTCGGCTGATGCCCCAGCCCGGCGTTTGATGGGTTCAACGTCGGGGGCCGCTTCATTAAATTTATCTTCAGAAGGGCTAGTCGAAGCAGGATCAGCAAAGCCCAGGAGACTTTCATTGTCAGAGCCTAGGCAGATGCCTAGTGCAGAGGATAACATTGACACAGAGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010313 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016787 GO:0016788 GO:0017148 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048027 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

443

Amino Acids

47.94

Weight (kDa)

8.62

Isoelectric Point (pI)

57.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH	PF00642	53 - 77	7.3e-08	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	98 - 122	5.2e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	144 - 168	2.7e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	303 - 329	1.6e-08	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	349 - 375	9.7e-11	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02830 AT3G02830
fragaria_vesca	FvH4_6g00570 FvH4_6g00570
malus_domestica	MD04G1244100.v1.1 MD12G1259900.v1.1
prunus_persica	Prupe.6G360600_v2.0.a1
pyrus_communis	pycom04g21500 pycom12g23800
rosa_chinensis	RchiOBHm_Chr3g0447961
rosa_laevigata	RLG00000025957
rosa_multiflora	Rmu_co8476507.1_g000001
rosa_roxburghii	Rroxscaffold_6G00426150
rosa_rugosa	Rorug02G0607300 Rorug02G0607400
rosa_samantha	Rh3AG006600 Rh3BG006300 Rh3CG006500 Rh3DG006900
rosa_wichuraiana	Rw3G000530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1140
Acc36I	ACCTGC	1 cut(s)	335
AccB7I	CCANNNNNTGG	1 cut(s)	1123
AccII	CGCG	1 cut(s)	41
AciI	CCGC	6 cut(s)	39, 252, 374, 531, 764, 1206
AclWI	GGATC	2 cut(s)	826, 1255
AcoI	YGGCCR	3 cut(s)	574, 718, 910
AcsI	RAATTY	3 cut(s)	488, 811, 1216
AcuI	CTGAAG	2 cut(s)	335, 1209
AfaI	GTAC	1 cut(s)	308
AfiI	CCNNNNNNNGG	4 cut(s)	241, 258, 1123, 1176
AflIII	ACRYGT	1 cut(s)	209
AgsI	TTSAA	2 cut(s)	1114, 1194
AjnI	CCWGG	4 cut(s)	571, 697, 907, 1259
AjuI	GAANNNNNNNTTGG	2 cut(s)	589, 621
AluBI	AGCT	2 cut(s)	241, 647
AluI	AGCT	2 cut(s)	241, 647
Alw26I	GTCTC	4 cut(s)	33, 360, 898, 1258
AlwI	GGATC	2 cut(s)	826, 1255
Ama87I	CYCGRG	1 cut(s)	143
AoxI	GGCC	6 cut(s)	134, 574, 718, 910, 1030, 1203
ApaI	GGGCCC	1 cut(s)	138
ApeKI	GCWGC	2 cut(s)	35, 254
ApoI	RAATTY	3 cut(s)	488, 811, 1216
AspA2I	CCTAGG	2 cut(s)	983, 1283
AspLEI	GCGC	1 cut(s)	43
AspS9I	GGNCC	5 cut(s)	134, 135, 1030, 1097, 1203
AsuC2I	CCSGG	3 cut(s)	133, 1047, 1177
AsuHPI	GGTGA	2 cut(s)	40, 812
AvaI	CYCGRG	1 cut(s)	143
AvaII	GGWCC	1 cut(s)	1097
AvrII	CCTAGG	2 cut(s)	983, 1283
BaeGI	GKGCMC	1 cut(s)	138
BalI	TGGCCA	3 cut(s)	576, 720, 912
BanII	GRGCYC	1 cut(s)	138
BauI	CACGAG	1 cut(s)	30
BbsI	GAAGAC	2 cut(s)	323, 944
BbvI	GCAGC	2 cut(s)	22, 241
BccI	CCATC	6 cut(s)	504, 511, 696, 863, 984, 1180
BcgI	CGANNNNNNTGC	2 cut(s)	1140, 1174
BciT130I	CCWGG	4 cut(s)	573, 699, 909, 1261
BcnI	CCSGG	3 cut(s)	133, 1047, 1177
BcoDI	GTCTC	4 cut(s)	33, 360, 898, 1258
BfaI	CTAG	5 cut(s)	363, 984, 1235, 1284, 1296
BfmI	CTRYAG	2 cut(s)	861, 967
BfuAI	ACCTGC	1 cut(s)	335
BglI	GCCNNNNNGGC	1 cut(s)	726
BisI	GCNGC	6 cut(s)	36, 39, 252, 255, 532, 1206
BlnI	CCTAGG	2 cut(s)	983, 1283
BlsI	GCNGC	6 cut(s)	37, 40, 253, 256, 533, 1207
BmcAI	AGTACT	1 cut(s)	308
Bme1390I	CCNGG	7 cut(s)	133, 573, 699, 909, 1047, 1177, 1261
Bme18I	GGWCC	1 cut(s)	1097
BmeT110I	CYCGRG	1 cut(s)	143
BmgT120I	GGNCC	5 cut(s)	134, 135, 1030, 1097, 1203
BmiI	GGNNCC	5 cut(s)	136, 325, 730, 853, 1204
BmrFI	CCNGG	7 cut(s)	133, 573, 699, 909, 1047, 1177, 1261
BmrI	ACTGGG	2 cut(s)	624, 951
BmsI	GCATC	6 cut(s)	76, 626, 1071, 1156, 1160, 1281
BmuI	ACTGGG	2 cut(s)	624, 951
BpiI	GAAGAC	2 cut(s)	323, 944
BpmI	CTGGAG	3 cut(s)	174, 726, 990
BpuEI	CTTGAG	2 cut(s)	663, 807
BpuMI	CCSGG	3 cut(s)	133, 1047, 1177
BsaI	GGTCTC	1 cut(s)	898
BsaJI	CCNNGG	4 cut(s)	697, 983, 1259, 1283
BsaWI	WCCGGW	3 cut(s)	234, 458, 805
Bsc4I	CCNNNNNNNGG	4 cut(s)	241, 258, 1123, 1176
Bse1I	ACTGG	3 cut(s)	630, 925, 946
Bse3DI	GCAATG	2 cut(s)	96, 875
BseBI	CCWGG	4 cut(s)	573, 699, 909, 1261
BseDI	CCNNGG	4 cut(s)	697, 983, 1259, 1283
BseGI	GGATG	7 cut(s)	223, 267, 358, 496, 707, 855, 979
BseLI	CCNNNNNNNGG	4 cut(s)	241, 258, 1123, 1176
BseMI	GCAATG	2 cut(s)	96, 875
BseMII	CTCAG	2 cut(s)	891, 909
BseNI	ACTGG	3 cut(s)	630, 925, 946
BseRI	GAGGAG	1 cut(s)	654
BseSI	GKGCMC	1 cut(s)	138
BseXI	GCAGC	2 cut(s)	22, 241
BseYI	CCCAGC	1 cut(s)	1171
BsgI	GTGCAG	1 cut(s)	1320
Bsh1236I	CGCG	1 cut(s)	41
Bsh1285I	CGRYCG	2 cut(s)	425, 1046
BshFI	GGCC	6 cut(s)	136, 576, 720, 912, 1032, 1205
BsiEI	CGRYCG	2 cut(s)	425, 1046
BsiHKCI	CYCGRG	1 cut(s)	143
BsiSI	CCGG	7 cut(s)	15, 132, 235, 459, 806, 1046, 1177
BslFI	GGGAC	1 cut(s)	680
BslI	CCNNNNNNNGG	4 cut(s)	241, 258, 1123, 1176
BsmAI	GTCTC	4 cut(s)	33, 360, 898, 1258
BsmFI	GGGAC	1 cut(s)	680
BsnI	GGCC	6 cut(s)	136, 576, 720, 912, 1032, 1205
Bso31I	GGTCTC	1 cut(s)	898
BsoBI	CYCGRG	1 cut(s)	143
Bsp120I	GGGCCC	1 cut(s)	134
Bsp1286I	GDGCHC	1 cut(s)	138
Bsp143I	GATC	3 cut(s)	110, 818, 1247
BspACI	CCGC	6 cut(s)	39, 252, 374, 531, 764, 1206
BspANI	GGCC	6 cut(s)	136, 576, 720, 912, 1032, 1205
BspCNI	CTCAG	2 cut(s)	892, 910
BspFNI	CGCG	1 cut(s)	41
BspLI	GGNNCC	5 cut(s)	136, 325, 730, 853, 1204
BspMI	ACCTGC	1 cut(s)	335
BspPI	GGATC	2 cut(s)	826, 1255
BspTNI	GGTCTC	1 cut(s)	898
BsrDI	GCAATG	2 cut(s)	96, 875
BsrI	ACTGG	3 cut(s)	630, 925, 946
BssECI	CCNNGG	4 cut(s)	697, 983, 1259, 1283
BssMI	GATC	3 cut(s)	110, 818, 1247
BssSI	CACGAG	1 cut(s)	30
BssT1I	CCWWGG	2 cut(s)	983, 1283
Bst2BI	CACGAG	1 cut(s)	30
Bst2UI	CCWGG	4 cut(s)	573, 699, 909, 1261
Bst4CI	ACNGT	8 cut(s)	66, 541, 553, 716, 773, 845, 1013, 1056
Bst6I	CTCTTC	1 cut(s)	382
BstC8I	GCNNGC	7 cut(s)	58, 150, 243, 578, 641, 645, 914
BstDEI	CTNAG	3 cut(s)	406, 900, 918
BstF5I	GGATG	7 cut(s)	223, 267, 358, 496, 707, 855, 979
BstFNI	CGCG	1 cut(s)	41
BstHHI	GCGC	1 cut(s)	43
BstKTI	GATC	3 cut(s)	113, 821, 1250
BstMAI	GTCTC	4 cut(s)	33, 360, 898, 1258
BstMBI	GATC	3 cut(s)	110, 818, 1247
BstMCI	CGRYCG	2 cut(s)	425, 1046
BstMWI	GCNNNNNNNGC	4 cut(s)	251, 380, 726, 1250
BstNI	CCWGG	4 cut(s)	573, 699, 909, 1261
BstNSI	RCATGY	2 cut(s)	213, 348
BstSCI	CCNGG	7 cut(s)	131, 571, 697, 907, 1045, 1175, 1259
BstSFI	CTRYAG	2 cut(s)	861, 967
BstSLI	GKGCMC	1 cut(s)	138
BstUI	CGCG	1 cut(s)	41
BstV1I	GCAGC	2 cut(s)	22, 241
BstV2I	GAAGAC	2 cut(s)	323, 944
BstX2I	RGATCY	1 cut(s)	818
BstYI	RGATCY	1 cut(s)	818
BsuRI	GGCC	6 cut(s)	136, 576, 720, 912, 1032, 1205
BtsCI	GGATG	7 cut(s)	223, 267, 358, 496, 707, 855, 979
BtsIMutI	CAGTG	3 cut(s)	62, 531, 721
BveI	ACCTGC	1 cut(s)	335
Cac8I	GCNNGC	7 cut(s)	58, 150, 243, 578, 641, 645, 914
CfoI	GCGC	1 cut(s)	43
Cfr13I	GGNCC	5 cut(s)	134, 135, 1030, 1097, 1203
CseI	GACGC	1 cut(s)	62
Csp6I	GTAC	1 cut(s)	307
CviAII	CATG	3 cut(s)	25, 210, 345
CviQI	GTAC	1 cut(s)	307
DdeI	CTNAG	3 cut(s)	406, 900, 918
DpnI	GATC	3 cut(s)	112, 820, 1249
DpnII	GATC	3 cut(s)	110, 818, 1247
EaeI	YGGCCR	3 cut(s)	574, 718, 910
Eam1104I	CTCTTC	1 cut(s)	382
EarI	CTCTTC	1 cut(s)	382
Eco130I	CCWWGG	2 cut(s)	983, 1283
Eco24I	GRGCYC	1 cut(s)	138
Eco31I	GGTCTC	1 cut(s)	898
Eco47I	GGWCC	1 cut(s)	1097
Eco57I	CTGAAG	2 cut(s)	335, 1209
Eco88I	CYCGRG	1 cut(s)	143
EcoO109I	RGGNCCY	1 cut(s)	135
EcoRII	CCWGG	4 cut(s)	571, 697, 907, 1259
EcoT14I	CCWWGG	2 cut(s)	983, 1283
EcoT22I	ATGCAT	1 cut(s)	877
EcoT38I	GRGCYC	1 cut(s)	138
ErhI	CCWWGG	2 cut(s)	983, 1283
FaeI	CATG	3 cut(s)	28, 213, 348
FalI	AAGNNNNNCTT	2 cut(s)	604, 636
FaqI	GGGAC	1 cut(s)	680
FatI	CATG	3 cut(s)	24, 209, 344
FauI	CCCGC	2 cut(s)	367, 757
Fnu4HI	GCNGC	6 cut(s)	36, 39, 252, 255, 532, 1206
FokI	GGATG	7 cut(s)	210, 274, 345, 483, 714, 842, 966
FriOI	GRGCYC	1 cut(s)	138
Fsp4HI	GCNGC	6 cut(s)	36, 39, 252, 255, 532, 1206
FspBI	CTAG	5 cut(s)	363, 984, 1235, 1284, 1296
GlaI	GCGC	1 cut(s)	42
GluI	GCNGC	6 cut(s)	36, 39, 252, 255, 532, 1206
GsaI	CCCAGC	1 cut(s)	1175
GsuI	CTGGAG	3 cut(s)	174, 726, 990
HaeIII	GGCC	6 cut(s)	136, 576, 720, 912, 1032, 1205
HapII	CCGG	7 cut(s)	15, 132, 235, 459, 806, 1046, 1177
HgaI	GACGC	1 cut(s)	62
HhaI	GCGC	1 cut(s)	43
Hin1II	CATG	3 cut(s)	28, 213, 348
Hin6I	GCGC	1 cut(s)	41
HinP1I	GCGC	1 cut(s)	41
HinfI	GANTC	3 cut(s)	963, 972, 1021
HpaII	CCGG	7 cut(s)	15, 132, 235, 459, 806, 1046, 1177
HphI	GGTGA	2 cut(s)	40, 812
Hpy166II	GTNNAC	2 cut(s)	635, 803
Hpy188I	TCNGA	4 cut(s)	182, 777, 1228, 1279
Hpy188III	TCNNGA	6 cut(s)	143, 612, 743, 816, 899, 1007
Hpy8I	GTNNAC	2 cut(s)	635, 803
Hpy99I	CGWCG	2 cut(s)	56, 1201
HpyAV	CCTTC	3 cut(s)	259, 1043, 1223
HpyCH4III	ACNGT	8 cut(s)	66, 541, 553, 716, 773, 845, 1013, 1056
HpyCH4IV	ACGT	1 cut(s)	1196
HpyF10VI	GCNNNNNNNGC	4 cut(s)	251, 380, 726, 1250
HpyF3I	CTNAG	3 cut(s)	406, 900, 918
HpySE526I	ACGT	1 cut(s)	1196
Hsp92II	CATG	3 cut(s)	28, 213, 348
HspAI	GCGC	1 cut(s)	41
Kzo9I	GATC	3 cut(s)	110, 818, 1247
LmnI	GCTCC	4 cut(s)	338, 667, 734, 1009
Lsp1109I	GCAGC	2 cut(s)	22, 241
LweI	GCATC	6 cut(s)	76, 626, 1071, 1156, 1160, 1281
MaeI	CTAG	5 cut(s)	363, 984, 1235, 1284, 1296
MaeII	ACGT	1 cut(s)	1196
MaeIII	GTNAC	2 cut(s)	46, 656
MalI	GATC	3 cut(s)	112, 820, 1249
MboI	GATC	3 cut(s)	110, 818, 1247
MboII	GAAGA	7 cut(s)	328, 399, 949, 1057, 1123, 1149, 1215
MflI	RGATCY	1 cut(s)	818
MhlI	GDGCHC	1 cut(s)	138
MlsI	TGGCCA	3 cut(s)	576, 720, 912
MluCI	AATT	8 cut(s)	285, 378, 488, 597, 604, 811, 996, 1216
MluNI	TGGCCA	3 cut(s)	576, 720, 912
MlyI	GAGTC	2 cut(s)	972, 1030
MmeI	TCCRAC	1 cut(s)	587
MnlI	CCTC	9 cut(s)	82, 424, 587, 675, 687, 739, 984, 1297, 1315
Mox20I	TGGCCA	3 cut(s)	576, 720, 912
Mph1103I	ATGCAT	1 cut(s)	877
MscI	TGGCCA	3 cut(s)	576, 720, 912
MseI	TTAA	4 cut(s)	219, 398, 995, 1214
Msp20I	TGGCCA	3 cut(s)	576, 720, 912
MspA1I	CMGCKG	2 cut(s)	254, 764
MspI	CCGG	7 cut(s)	15, 132, 235, 459, 806, 1046, 1177
MspR9I	CCNGG	7 cut(s)	133, 573, 699, 909, 1047, 1177, 1261
MvaI	CCWGG	4 cut(s)	573, 699, 909, 1261
MvnI	CGCG	1 cut(s)	41
MwoI	GCNNNNNNNGC	4 cut(s)	251, 380, 726, 1250
NciI	CCSGG	3 cut(s)	133, 1047, 1177
NdeII	GATC	3 cut(s)	110, 818, 1247
NlaIII	CATG	3 cut(s)	28, 213, 348
NlaIV	GGNNCC	5 cut(s)	136, 325, 730, 853, 1204
NmuCI	GTSAC	1 cut(s)	46
NsiI	ATGCAT	1 cut(s)	877
NspI	RCATGY	2 cut(s)	213, 348
PciI	ACATGT	1 cut(s)	209
PfeI	GAWTC	1 cut(s)	972
PflMI	CCANNNNNTGG	1 cut(s)	1123
PkrI	GCNGC	6 cut(s)	37, 40, 253, 256, 533, 1207
PleI	GAGTC	2 cut(s)	971, 1029
PpsI	GAGTC	2 cut(s)	971, 1029
PscI	ACATGT	1 cut(s)	209
PsiI	TTATAA	1 cut(s)	1140
Psp6I	CCWGG	4 cut(s)	571, 697, 907, 1259
PspFI	CCCAGC	1 cut(s)	1171
PspGI	CCWGG	4 cut(s)	571, 697, 907, 1259
PspN4I	GGNNCC	5 cut(s)	136, 325, 730, 853, 1204
PspOMI	GGGCCC	1 cut(s)	134
PspPI	GGNCC	5 cut(s)	134, 135, 1030, 1097, 1203
PsuI	RGATCY	1 cut(s)	818
RsaI	GTAC	1 cut(s)	308
RsaNI	GTAC	1 cut(s)	307
SaqAI	TTAA	4 cut(s)	219, 398, 995, 1214
SatI	GCNGC	6 cut(s)	36, 39, 252, 255, 532, 1206
Sau3AI	GATC	3 cut(s)	110, 818, 1247
Sau96I	GGNCC	5 cut(s)	134, 135, 1030, 1097, 1203
ScaI	AGTACT	1 cut(s)	308
SchI	GAGTC	2 cut(s)	972, 1030
ScrFI	CCNGG	7 cut(s)	133, 573, 699, 909, 1047, 1177, 1261
SduI	GDGCHC	1 cut(s)	138
SfaNI	GCATC	6 cut(s)	76, 626, 1071, 1156, 1160, 1281
SfcI	CTRYAG	2 cut(s)	861, 967
SinI	GGWCC	1 cut(s)	1097
SmlI	CTYRAG	2 cut(s)	678, 822
SmoI	CTYRAG	2 cut(s)	678, 822
Sse9I	AATT	8 cut(s)	285, 378, 488, 597, 604, 811, 996, 1216
SsiI	CCGC	6 cut(s)	39, 252, 374, 531, 764, 1206
SspMI	CTAG	5 cut(s)	363, 984, 1235, 1284, 1296
StyD4I	CCNGG	7 cut(s)	131, 571, 697, 907, 1045, 1175, 1259
StyI	CCWWGG	2 cut(s)	983, 1283
TaaI	ACNGT	8 cut(s)	66, 541, 553, 716, 773, 845, 1013, 1056
TaiI	ACGT	1 cut(s)	1199
TaqI	TCGA	4 cut(s)	9, 421, 435, 1239
TaqII	GACCGA	1 cut(s)	439
TasI	AATT	8 cut(s)	285, 378, 488, 597, 604, 811, 996, 1216
TatI	WGTACW	1 cut(s)	306
TauI	GCSGC	4 cut(s)	41, 254, 534, 1208
TfiI	GAWTC	1 cut(s)	972
Tru1I	TTAA	4 cut(s)	219, 398, 995, 1214
Tru9I	TTAA	4 cut(s)	219, 398, 995, 1214
TscAI	CASTG	3 cut(s)	69, 531, 721
TseFI	GTSAC	1 cut(s)	46
TseI	GCWGC	2 cut(s)	35, 254
Tsp45I	GTSAC	1 cut(s)	46
TspDTI	ATGAA	7 cut(s)	116, 278, 344, 726, 950, 1200, 1260
TspGWI	ACGGA	1 cut(s)	721
TspRI	CASTG	3 cut(s)	69, 531, 721
Van91I	CCANNNNNTGG	1 cut(s)	1123
VpaK11BI	GGWCC	1 cut(s)	1097
XapI	RAATTY	3 cut(s)	488, 811, 1216
XceI	RCATGY	2 cut(s)	213, 348
XmaJI	CCTAGG	2 cut(s)	983, 1283
XspI	CTAG	5 cut(s)	363, 984, 1235, 1284, 1296
ZrmI	AGTACT	1 cut(s)	308
Zsp2I	ATGCAT	1 cut(s)	877

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.