Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0011471

Physical Location & Seq

Genomic Coordinates Forward (+)

448068 .. 451573

Gene Structure 3506 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G000530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGGACTTCGATGCCGGAATTCCCATGTCCCGTGCTTCCGCCGCGCCTGTGACCGACGACGCCTCCTCACTGTCACCGCAAGATGCAATGTGGCAAATGAATTTGAGATCAAGTGAATCAATGGAACCTGGACCCTATCCTGAGCGAGCTGGAGAGCCAGATTGCTCTTATTACATCAGAACAGGCCTCTGTAGATTTGGGGCAACATGTCGCTTCAATCATCCTCCTAACCGAAAGCTGGCTATTGCCACTGCAAGAATGAAGGGGGAGTTCCCAGAAAGAATTGGACAACCTGAATGCCAGTATTACCTGAAGACAGGAACTTGCAAGTTCGGAGCGACATGCAAGTTTCATCATCCTAGAGACAAGGCAGGAATTGCTGGAAGAGTTGCCTTAAATATCTTAGGCTATCCACTTCGACCGAATGAGATTGAATGTGCATATTATTTACGAACTGGACAATGCAAGTTTGCAAGCACTTGTAAATTCCACCATCCACAACCTACTAATATGATGGTTTCGCTAAGTGGTTCTCCTGTATATCCTACTGTTCAATCTCCAACTACACCTGGTCAGCAGTCATACCCGGGAGGAGTTACGAACTGGTCAAGAGCATCTTTTATTCCCAGTCCGCGTTGGCAAGGTCCATCAAGTTATGCTCCTCTTATTGTTCCTCAGGGAGTGGTATCAGTCCCAGGATGGAGCCCATACAGTGGCCAGGTCGGCTCAATTTCAACTTCAGAGGGGCAGCAGCAAACGATAGGAAGTAGTCAGGTTTATGGAACTCCACGCCAACGTGAACCGGAAAATTCAGGATCTCAAGGGGCCTTTTCTTCATACCGGTCTGGCTCCATTCCTGTAGGGTTCTATGCATTGCAGAGGGAAAATGTATTTCCTGAGAGACCTGGACAACCAGAGTGCCAGTTTTACATGAAGACAGGTGATTGTAAGTTTGGTGCGGTTTGTAGGTTCCATCATCCTAGGGAGCGATTAATTCCTGCTCCAGATTGTGTTTTGAGTCCAATAGGCCTTCCTTTGCGACCGGGAGAACCTTTGTGCATCTTTTATTCTCGTTATGGTATCTGTAAGTTTGGTCCGAGTTGCAAGTTTGACCACCCTATGGGTATCTTCACTTATAACCTTTCTGCTTCATCTTCGGCTGAGAGCCCTGCGCGGCGTTTGTTGGGGTCGACATCAGGCACCACTTCATTAAATTTATCATCAGAAGGTCTAGTTGAAGCAGGATCAACAAAGCCAAGGAGACTTTCACTATCAGAGCCTAGGCAGATGCCTTCTGCGGATGAAAATATTGACACAGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010313 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016787 GO:0016788 GO:0017148 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048027 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

441

Amino Acids

48.18

Weight (kDa)

8.62

Isoelectric Point (pI)

60.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH	PF00642	52 - 76	7.3e-08	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	97 - 121	5.2e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	145 - 167	1.8e-07	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	302 - 328	6.8e-09	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	348 - 374	1.6e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02830 AT3G02830
fragaria_vesca	FvH4_6g00570 FvH4_6g00570
malus_domestica	MD04G1244100.v1.1 MD12G1259900.v1.1
prunus_persica	Prupe.6G360600_v2.0.a1
pyrus_communis	pycom04g21500 pycom12g23800
rosa_chinensis	RchiOBHm_Chr3g0447961
rosa_laevigata	RLG00000025957
rosa_multiflora	Rmu_co8476507.1_g000001
rosa_roxburghii	Rroxscaffold_6G00426150
rosa_rugosa	Rorug02G0607300 Rorug02G0607400
rosa_samantha	Rh3AG006600 Rh3BG006300 Rh3CG006500 Rh3DG006900
rosa_wichuraiana	Rw3G000530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1137
AccB1I	GGYRCC	1 cut(s)	1199
AccB7I	CCANNNNNTGG	2 cut(s)	713, 1120
AccI	GTMKAC	1 cut(s)	1190
AccII	CGCG	3 cut(s)	44, 634, 1174
AciI	CCGC	7 cut(s)	39, 42, 77, 632, 959, 1174, 1298
AclWI	GGATC	2 cut(s)	823, 1252
AcoI	YGGCCR	1 cut(s)	715
AcsI	RAATTY	5 cut(s)	18, 100, 485, 808, 1213
AcuI	CTGAAG	2 cut(s)	332, 723
AcyI	GRCGYC	1 cut(s)	60
AfiI	CCNNNNNNNGG	3 cut(s)	238, 713, 1120
AflIII	ACRYGT	1 cut(s)	206
AgeI	ACCGGT	1 cut(s)	840
AgsI	TTSAA	5 cut(s)	217, 434, 554, 735, 1238
AjnI	CCWGG	5 cut(s)	127, 568, 694, 717, 904
AjuI	GAANNNNNNNTTGG	2 cut(s)	1249, 1281
AluBI	AGCT	2 cut(s)	149, 238
AluI	AGCT	2 cut(s)	149, 238
Alw26I	GTCTC	3 cut(s)	357, 895, 1255
AlwI	GGATC	2 cut(s)	823, 1252
Ama87I	CYCGRG	1 cut(s)	586
AoxI	GGCC	4 cut(s)	184, 715, 825, 1027
ApeKI	GCWGC	2 cut(s)	748, 751
ApoI	RAATTY	5 cut(s)	18, 100, 485, 808, 1213
AseI	ATTAAT	1 cut(s)	992
AsiGI	ACCGGT	1 cut(s)	840
AspA2I	CCTAGG	2 cut(s)	980, 1280
AspLEI	GCGC	2 cut(s)	46, 1174
AspS9I	GGNCC	4 cut(s)	131, 644, 825, 1094
AsuC2I	CCSGG	3 cut(s)	587, 588, 1044
AsuHPI	GGTGA	2 cut(s)	66, 953
AvaI	CYCGRG	1 cut(s)	586
AvaII	GGWCC	3 cut(s)	131, 644, 1094
AvrII	CCTAGG	2 cut(s)	980, 1280
AxyI	CCTNAGG	1 cut(s)	675
BalI	TGGCCA	1 cut(s)	717
BanI	GGYRCC	1 cut(s)	1199
BanII	GRGCYC	2 cut(s)	707, 1169
BbsI	GAAGAC	2 cut(s)	320, 941
BbvI	GCAGC	2 cut(s)	760, 763
BccI	CCATC	5 cut(s)	501, 508, 655, 693, 981
BciT130I	CCWGG	5 cut(s)	129, 570, 696, 719, 906
BcnI	CCSGG	3 cut(s)	587, 588, 1044
BcoDI	GTCTC	3 cut(s)	357, 895, 1255
BfaI	CTAG	4 cut(s)	360, 981, 1232, 1281
BfmI	CTRYAG	2 cut(s)	190, 858
BglI	GCCNNNNNGGC	1 cut(s)	723
BisI	GCNGC	4 cut(s)	42, 749, 752, 1175
BlnI	CCTAGG	2 cut(s)	980, 1280
BlsI	GCNGC	4 cut(s)	43, 750, 753, 1176
Bme1390I	CCNGG	8 cut(s)	129, 570, 587, 588, 696, 719, 906, 1044
Bme18I	GGWCC	3 cut(s)	131, 644, 1094
BmeT110I	CYCGRG	1 cut(s)	586
BmgT120I	GGNCC	4 cut(s)	131, 644, 825, 1094
BmiI	GGNNCC	7 cut(s)	126, 133, 704, 826, 850, 971, 1201
BmrFI	CCNGG	8 cut(s)	129, 570, 587, 588, 696, 719, 906, 1044
BmrI	ACTGGG	1 cut(s)	621
BmsI	GCATC	4 cut(s)	73, 623, 1068, 1278
BmuI	ACTGGG	1 cut(s)	621
BpiI	GAAGAC	2 cut(s)	320, 941
BpmI	CTGGAG	2 cut(s)	171, 987
Bpu10I	CCTNAGC	1 cut(s)	141
BpuEI	CTTGAG	1 cut(s)	804
BpuMI	CCSGG	3 cut(s)	587, 588, 1044
BsaHI	GRCGYC	1 cut(s)	60
BsaI	GGTCTC	1 cut(s)	895
BsaJI	CCNNGG	5 cut(s)	586, 694, 980, 1256, 1280
BsaWI	WCCGGW	2 cut(s)	802, 840
BsaXI	ACNNNNNCTCC	2 cut(s)	47, 77
Bsc4I	CCNNNNNNNGG	3 cut(s)	238, 713, 1120
Bse118I	RCCGGY	1 cut(s)	840
Bse1I	ACTGG	5 cut(s)	301, 460, 608, 627, 922
Bse21I	CCTNAGG	1 cut(s)	675
Bse3DI	GCAATG	2 cut(s)	93, 872
BseBI	CCWGG	5 cut(s)	129, 570, 696, 719, 906
BseDI	CCNNGG	5 cut(s)	586, 694, 980, 1256, 1280
BseGI	GGATG	6 cut(s)	220, 355, 493, 704, 976, 1306
BseLI	CCNNNNNNNGG	3 cut(s)	238, 713, 1120
BseMI	GCAATG	2 cut(s)	93, 872
BseMII	CTCAG	4 cut(s)	132, 689, 888, 1152
BseNI	ACTGG	5 cut(s)	301, 460, 608, 627, 922
BseRI	GAGGAG	3 cut(s)	55, 606, 651
BseXI	GCAGC	2 cut(s)	760, 763
Bsh1236I	CGCG	3 cut(s)	44, 634, 1174
Bsh1285I	CGRYCG	2 cut(s)	422, 1043
BshFI	GGCC	4 cut(s)	186, 717, 827, 1029
BshNI	GGYRCC	1 cut(s)	1199
BshTI	ACCGGT	1 cut(s)	840
BsiEI	CGRYCG	2 cut(s)	422, 1043
BsiHKCI	CYCGRG	1 cut(s)	586
BsiSI	CCGG	5 cut(s)	15, 587, 803, 841, 1043
BslFI	GGGAC	2 cut(s)	13, 677
BslI	CCNNNNNNNGG	3 cut(s)	238, 713, 1120
BsmAI	GTCTC	3 cut(s)	357, 895, 1255
BsmFI	GGGAC	2 cut(s)	13, 677
BsmI	GAATGC	1 cut(s)	302
BsnI	GGCC	4 cut(s)	186, 717, 827, 1029
Bso31I	GGTCTC	1 cut(s)	895
BsoBI	CYCGRG	1 cut(s)	586
Bsp1286I	GDGCHC	2 cut(s)	707, 1169
Bsp143I	GATC	3 cut(s)	107, 815, 1244
BspACI	CCGC	7 cut(s)	39, 42, 77, 632, 959, 1174, 1298
BspANI	GGCC	4 cut(s)	186, 717, 827, 1029
BspCNI	CTCAG	4 cut(s)	133, 688, 889, 1153
BspFNI	CGCG	3 cut(s)	44, 634, 1174
BspLI	GGNNCC	7 cut(s)	126, 133, 704, 826, 850, 971, 1201
BspPI	GGATC	2 cut(s)	823, 1252
BspT107I	GGYRCC	1 cut(s)	1199
BspTNI	GGTCTC	1 cut(s)	895
BsrDI	GCAATG	2 cut(s)	93, 872
BsrFI	RCCGGY	1 cut(s)	840
BsrI	ACTGG	5 cut(s)	301, 460, 608, 627, 922
BssAI	RCCGGY	1 cut(s)	840
BssECI	CCNNGG	5 cut(s)	586, 694, 980, 1256, 1280
BssMI	GATC	3 cut(s)	107, 815, 1244
BssNI	GRCGYC	1 cut(s)	60
BssT1I	CCWWGG	3 cut(s)	980, 1256, 1280
Bst2UI	CCWGG	5 cut(s)	129, 570, 696, 719, 906
Bst4CI	ACNGT	3 cut(s)	72, 550, 713
Bst6I	CTCTTC	1 cut(s)	379
BstACI	GRCGYC	1 cut(s)	60
BstAPI	GCANNNNNTGC	1 cut(s)	377
BstC8I	GCNNGC	3 cut(s)	147, 240, 475
BstDEI	CTNAG	6 cut(s)	141, 403, 524, 675, 897, 1161
BstF5I	GGATG	6 cut(s)	220, 355, 493, 704, 976, 1306
BstFNI	CGCG	3 cut(s)	44, 634, 1174
BstHHI	GCGC	2 cut(s)	46, 1174
BstKTI	GATC	3 cut(s)	110, 818, 1247
BstMAI	GTCTC	3 cut(s)	357, 895, 1255
BstMBI	GATC	3 cut(s)	107, 815, 1244
BstMCI	CGRYCG	2 cut(s)	422, 1043
BstMWI	GCNNNNNNNGC	3 cut(s)	41, 377, 723
BstNI	CCWGG	5 cut(s)	129, 570, 696, 719, 906
BstNSI	RCATGY	2 cut(s)	210, 345
BstSCI	CCNGG	8 cut(s)	127, 568, 585, 586, 694, 717, 904, 1042
BstSFI	CTRYAG	2 cut(s)	190, 858
BstUI	CGCG	3 cut(s)	44, 634, 1174
BstV1I	GCAGC	2 cut(s)	760, 763
BstV2I	GAAGAC	2 cut(s)	320, 941
BstX2I	RGATCY	1 cut(s)	815
BstYI	RGATCY	1 cut(s)	815
Bsu36I	CCTNAGG	1 cut(s)	675
BsuRI	GGCC	4 cut(s)	186, 717, 827, 1029
BtsCI	GGATG	6 cut(s)	220, 355, 493, 704, 976, 1306
BtsI	GCAGTG	1 cut(s)	249
BtsIMutI	CAGTG	3 cut(s)	68, 249, 718
Cac8I	GCNNGC	3 cut(s)	147, 240, 475
CfoI	GCGC	2 cut(s)	46, 1174
Cfr10I	RCCGGY	1 cut(s)	840
Cfr13I	GGNCC	4 cut(s)	131, 644, 825, 1094
Cfr9I	CCCGGG	1 cut(s)	586
CseI	GACGC	1 cut(s)	68
CsiI	ACCWGGT	1 cut(s)	568
CspAI	ACCGGT	1 cut(s)	840
CviAII	CATG	4 cut(s)	25, 207, 342, 931
DdeI	CTNAG	6 cut(s)	141, 403, 524, 675, 897, 1161
DpnI	GATC	3 cut(s)	109, 817, 1246
DpnII	GATC	3 cut(s)	107, 815, 1244
EaeI	YGGCCR	1 cut(s)	715
Eam1104I	CTCTTC	1 cut(s)	379
EarI	CTCTTC	1 cut(s)	379
EciI	GGCGGA	1 cut(s)	28
Eco130I	CCWWGG	3 cut(s)	980, 1256, 1280
Eco147I	AGGCCT	2 cut(s)	186, 1029
Eco24I	GRGCYC	2 cut(s)	707, 1169
Eco31I	GGTCTC	1 cut(s)	895
Eco47I	GGWCC	3 cut(s)	131, 644, 1094
Eco57I	CTGAAG	2 cut(s)	332, 723
Eco81I	CCTNAGG	1 cut(s)	675
Eco88I	CYCGRG	1 cut(s)	586
EcoO109I	RGGNCCY	1 cut(s)	825
EcoRI	GAATTC	1 cut(s)	18
EcoRII	CCWGG	5 cut(s)	127, 568, 694, 717, 904
EcoT14I	CCWWGG	3 cut(s)	980, 1256, 1280
EcoT22I	ATGCAT	1 cut(s)	874
EcoT38I	GRGCYC	2 cut(s)	707, 1169
ErhI	CCWWGG	3 cut(s)	980, 1256, 1280
FaeI	CATG	4 cut(s)	28, 210, 345, 934
FalI	AAGNNNNNCTT	2 cut(s)	601, 633
FaqI	GGGAC	2 cut(s)	13, 677
FatI	CATG	4 cut(s)	24, 206, 341, 930
FblI	GTMKAC	1 cut(s)	1190
Fnu4HI	GCNGC	4 cut(s)	42, 749, 752, 1175
FokI	GGATG	6 cut(s)	207, 342, 480, 711, 963, 1313
FriOI	GRGCYC	2 cut(s)	707, 1169
Fsp4HI	GCNGC	4 cut(s)	42, 749, 752, 1175
FspBI	CTAG	4 cut(s)	360, 981, 1232, 1281
GlaI	GCGC	2 cut(s)	45, 1173
GluI	GCNGC	4 cut(s)	42, 749, 752, 1175
GsuI	CTGGAG	2 cut(s)	171, 987
HaeIII	GGCC	4 cut(s)	186, 717, 827, 1029
HapII	CCGG	5 cut(s)	15, 587, 803, 841, 1043
HgaI	GACGC	1 cut(s)	68
HhaI	GCGC	2 cut(s)	46, 1174
Hin1I	GRCGYC	1 cut(s)	60
Hin1II	CATG	4 cut(s)	28, 210, 345, 934
Hin6I	GCGC	2 cut(s)	44, 1172
HinP1I	GCGC	2 cut(s)	44, 1172
HincII	GTYRAC	1 cut(s)	1191
HindII	GTYRAC	1 cut(s)	1191
HinfI	GANTC	2 cut(s)	116, 1018
HpaII	CCGG	5 cut(s)	15, 587, 803, 841, 1043
HphI	GGTGA	2 cut(s)	66, 953
Hpy166II	GTNNAC	2 cut(s)	800, 1191
Hpy188I	TCNGA	6 cut(s)	179, 335, 742, 1098, 1225, 1276
Hpy188III	TCNNGA	5 cut(s)	140, 609, 813, 896, 1004
Hpy8I	GTNNAC	2 cut(s)	800, 1191
Hpy99I	CGWCG	2 cut(s)	59, 62
HpyAV	CCTTC	4 cut(s)	256, 1040, 1220, 1302
HpyCH4III	ACNGT	3 cut(s)	72, 550, 713
HpyCH4IV	ACGT	1 cut(s)	796
HpyF10VI	GCNNNNNNNGC	3 cut(s)	41, 377, 723
HpyF3I	CTNAG	6 cut(s)	141, 403, 524, 675, 897, 1161
HpySE526I	ACGT	1 cut(s)	796
Hsp92I	GRCGYC	1 cut(s)	60
Hsp92II	CATG	4 cut(s)	28, 210, 345, 934
HspAI	GCGC	2 cut(s)	44, 1172
Kzo9I	GATC	3 cut(s)	107, 815, 1244
LmnI	GCTCC	6 cut(s)	335, 664, 702, 854, 985, 1006
Lsp1109I	GCAGC	2 cut(s)	760, 763
LweI	GCATC	4 cut(s)	73, 623, 1068, 1278
MabI	ACCWGGT	1 cut(s)	568
MaeI	CTAG	4 cut(s)	360, 981, 1232, 1281
MaeII	ACGT	1 cut(s)	796
MaeIII	GTNAC	3 cut(s)	49, 72, 595
MalI	GATC	3 cut(s)	109, 817, 1246
MboI	GATC	3 cut(s)	107, 815, 1244
MboII	GAAGA	6 cut(s)	325, 396, 825, 946, 1120, 1146
MflI	RGATCY	1 cut(s)	815
MhlI	GDGCHC	2 cut(s)	707, 1169
MlsI	TGGCCA	1 cut(s)	717
MluCI	AATT	9 cut(s)	18, 100, 282, 375, 485, 729, 808, 993, 1213
MluNI	TGGCCA	1 cut(s)	717
MlyI	GAGTC	1 cut(s)	1027
MmeI	TCCRAC	1 cut(s)	584
Mox20I	TGGCCA	1 cut(s)	717
Mph1103I	ATGCAT	1 cut(s)	874
MscI	TGGCCA	1 cut(s)	717
MseI	TTAA	3 cut(s)	395, 992, 1211
Msp20I	TGGCCA	1 cut(s)	717
MspI	CCGG	5 cut(s)	15, 587, 803, 841, 1043
MspR9I	CCNGG	8 cut(s)	129, 570, 587, 588, 696, 719, 906, 1044
Mva1269I	GAATGC	1 cut(s)	302
MvaI	CCWGG	5 cut(s)	129, 570, 696, 719, 906
MvnI	CGCG	3 cut(s)	44, 634, 1174
MwoI	GCNNNNNNNGC	3 cut(s)	41, 377, 723
NciI	CCSGG	3 cut(s)	587, 588, 1044
NdeII	GATC	3 cut(s)	107, 815, 1244
NlaIII	CATG	4 cut(s)	28, 210, 345, 934
NlaIV	GGNNCC	7 cut(s)	126, 133, 704, 826, 850, 971, 1201
NmuCI	GTSAC	2 cut(s)	49, 72
NsiI	ATGCAT	1 cut(s)	874
NspI	RCATGY	2 cut(s)	210, 345
PceI	AGGCCT	2 cut(s)	186, 1029
PciI	ACATGT	1 cut(s)	206
PctI	GAATGC	1 cut(s)	302
PfeI	GAWTC	1 cut(s)	116
PflMI	CCANNNNNTGG	2 cut(s)	713, 1120
PinAI	ACCGGT	1 cut(s)	840
PkrI	GCNGC	4 cut(s)	43, 750, 753, 1176
PleI	GAGTC	1 cut(s)	1026
PpsI	GAGTC	1 cut(s)	1026
PscI	ACATGT	1 cut(s)	206
PshBI	ATTAAT	1 cut(s)	992
PsiI	TTATAA	1 cut(s)	1137
Psp6I	CCWGG	5 cut(s)	127, 568, 694, 717, 904
PspGI	CCWGG	5 cut(s)	127, 568, 694, 717, 904
PspN4I	GGNNCC	7 cut(s)	126, 133, 704, 826, 850, 971, 1201
PspPI	GGNCC	4 cut(s)	131, 644, 825, 1094
PsuI	RGATCY	1 cut(s)	815
SalI	GTCGAC	1 cut(s)	1189
SaqAI	TTAA	3 cut(s)	395, 992, 1211
SatI	GCNGC	4 cut(s)	42, 749, 752, 1175
Sau3AI	GATC	3 cut(s)	107, 815, 1244
Sau96I	GGNCC	4 cut(s)	131, 644, 825, 1094
SchI	GAGTC	1 cut(s)	1027
ScrFI	CCNGG	8 cut(s)	129, 570, 587, 588, 696, 719, 906, 1044
SduI	GDGCHC	2 cut(s)	707, 1169
SexAI	ACCWGGT	1 cut(s)	568
SfaNI	GCATC	4 cut(s)	73, 623, 1068, 1278
SfcI	CTRYAG	2 cut(s)	190, 858
SinI	GGWCC	3 cut(s)	131, 644, 1094
SmaI	CCCGGG	1 cut(s)	588
SmlI	CTYRAG	1 cut(s)	819
SmoI	CTYRAG	1 cut(s)	819
Sse9I	AATT	9 cut(s)	18, 100, 282, 375, 485, 729, 808, 993, 1213
SseBI	AGGCCT	2 cut(s)	186, 1029
SsiI	CCGC	7 cut(s)	39, 42, 77, 632, 959, 1174, 1298
SspI	AATATT	1 cut(s)	1309
SspMI	CTAG	4 cut(s)	360, 981, 1232, 1281
StuI	AGGCCT	2 cut(s)	186, 1029
StyD4I	CCNGG	8 cut(s)	127, 568, 585, 586, 694, 717, 904, 1042
StyI	CCWWGG	3 cut(s)	980, 1256, 1280
TaaI	ACNGT	3 cut(s)	72, 550, 713
TaiI	ACGT	1 cut(s)	799
TaqI	TCGA	3 cut(s)	9, 418, 1190
TaqII	GACCGA	2 cut(s)	68, 436
TasI	AATT	9 cut(s)	18, 100, 282, 375, 485, 729, 808, 993, 1213
TauI	GCSGC	2 cut(s)	44, 1177
TfiI	GAWTC	1 cut(s)	116
Tru1I	TTAA	3 cut(s)	395, 992, 1211
Tru9I	TTAA	3 cut(s)	395, 992, 1211
TscAI	CASTG	3 cut(s)	75, 256, 718
TseFI	GTSAC	2 cut(s)	49, 72
TseI	GCWGC	2 cut(s)	748, 751
Tsp45I	GTSAC	2 cut(s)	49, 72
TspDTI	ATGAA	8 cut(s)	113, 275, 341, 825, 947, 1140, 1197, 1317
TspMI	CCCGGG	1 cut(s)	586
TspRI	CASTG	3 cut(s)	75, 256, 718
Van91I	CCANNNNNTGG	2 cut(s)	713, 1120
VpaK11BI	GGWCC	3 cut(s)	131, 644, 1094
VspI	ATTAAT	1 cut(s)	992
XapI	RAATTY	5 cut(s)	18, 100, 485, 808, 1213
XceI	RCATGY	2 cut(s)	210, 345
XmaI	CCCGGG	1 cut(s)	586
XmaJI	CCTAGG	2 cut(s)	980, 1280
XmiI	GTMKAC	1 cut(s)	1190
XspI	CTAG	4 cut(s)	360, 981, 1232, 1281
Zsp2I	ATGCAT	1 cut(s)	874

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.