Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0011471

Physical Location & Seq

Genomic Coordinates Reverse (-)

32614920 .. 32618857

Gene Structure 3938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1259900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1335 bp

ATGGACTTCGATGCCGGAATTCCCATGTCTCGTGCTGCCGCGCCCGTCACCGACGCTCCCTCACTGTCACCTGCCTTGACCCAAGGTCATGCAATGTGGCCAATGAATTTGAGATCAAGTGAAACATTGGAAGCCGGGGGCTATCCCGAGCGAACTGGAGAGCCAGATTGCTCTTATTACATCAGAACAGGACTTTGTAGATTTGGGGCAACTTGTCGCTTTAATCATCCACCTAACCGGAAGCTGGCTATTGCCGCTGCAAGGATGAAGGGAGAGTTCCCCGAAAGAATTGGACAACCAGAATGTCAGTACTACCTGAAGACAGGAACCTGCAAGTTTGGAGCAACATGCAAGTTTCATCATCCTAGAGACAAGGCGGGAATCGCTGGAAGAGTTGCCTTAAATATCTTAGGCTATCCACTTCGACCGAATGAGATCGAATGTGCCTATTATTTACGAACTGGACAATGCAAGTTCGGAGGCACTTGTAAATTCCACCATCCCCAACCTACTAACATGATGGTTTCAGTGCGTGGCTCTCCTGTATATCCTACTGTCCAATCTCCAACTACTCCTGGCCAGCAGTCGTATGCAGGAGGAGTTACAAATTGGTCGAGAGCATCTTTTATTCCCAGTCCACGCTGGCAAGCTCCATCAAATTACGCTCCTCTCATTGTTCCTCAGGGAGTGGTATCAGTCCCTGGATGGAACGCATACAGTGGCCAGCTTGGCTCCGTTTCATCTGCAGAGAGTCAGCAACAAACAGCGGGAAACAGTCAGATGTATGGAACTTCACGCCAAGGTGAACCAGAAAATTCAGGATCTCAAGGGGGCTTTTCTCCATACCGTTCCGGTTCCATCCCTGTAGGGTTCTATGCATTGCAGAGGGAAAATGTATTTCCCGAGAGACCTGGCCAGCCTGAGTGCCAGTTCTATATGAAAACCGGGGATTGTAAGTTTGGTGCGGTCTGTAGGTTCCATCATCCTATGGAGAGGTTAATTCCTGCTCCAGACTGTGTTTTGAGTCCAATAGGCCTTCCTTTACGACCGGGAGAACCTATGTGCATCTTCTATTCTCGTTACGGTATCTGTAAGTTCGGACCAAGTTGCAAGTTTGACCACCCTATGGGCATCTTCACTTATGGTCTGTCTGCGTCATCTTCGGCTGATGCCCCAGCCCGGCGTTTGTTGGGTTCGACGTCGGGGGCGGCTTCATTAAATTTAGCATCATCAGGACTAGTTGAAGCAGGATCAGCAAATCCCAGGAGAGTTTCATTGTCGGAGCCTAGACAGATGCCTAGTGCAGAAGATAACAACATTGACAGAGAGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010313 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016787 GO:0016788 GO:0017148 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048027 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

445

Amino Acids

48.08

Weight (kDa)

8.8

Isoelectric Point (pI)

59.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH	PF00642	53 - 78	5.3e-08	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	99 - 123	5.2e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	147 - 169	1.6e-09	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	304 - 330	3.4e-09	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	351 - 376	7.6e-09	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02830 AT3G02830
fragaria_vesca	FvH4_6g00570 FvH4_6g00570
malus_domestica	MD04G1244100.v1.1 MD12G1259900.v1.1
prunus_persica	Prupe.6G360600_v2.0.a1
pyrus_communis	pycom04g21500 pycom12g23800
rosa_chinensis	RchiOBHm_Chr3g0447961
rosa_laevigata	RLG00000025957
rosa_multiflora	Rmu_co8476507.1_g000001
rosa_roxburghii	Rroxscaffold_6G00426150
rosa_rugosa	Rorug02G0607300 Rorug02G0607400
rosa_samantha	Rh3AG006600 Rh3BG006300 Rh3CG006500 Rh3DG006900
rosa_wichuraiana	Rw3G000530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	79
AatII	GACGTC	1 cut(s)	1202
Acc36I	ACCTGC	2 cut(s)	79, 338
AccB7I	CCANNNNNTGG	1 cut(s)	1126
AccII	CGCG	1 cut(s)	41
AciI	CCGC	6 cut(s)	39, 255, 377, 767, 965, 1208
AclWI	GGATC	2 cut(s)	829, 1258
AcoI	YGGCCR	4 cut(s)	98, 577, 721, 913
AcsI	RAATTY	5 cut(s)	18, 106, 491, 814, 1219
AcuI	CTGAAG	1 cut(s)	338
AcyI	GRCGYC	1 cut(s)	1199
AfaI	GTAC	1 cut(s)	311
AfiI	CCNNNNNNNGG	4 cut(s)	244, 261, 1126, 1179
AgsI	TTSAA	1 cut(s)	1244
AhdI	GACNNNNNGTC	1 cut(s)	84
AhlI	ACTAGT	1 cut(s)	1237
AjnI	CCWGG	4 cut(s)	574, 700, 910, 1262
AluBI	AGCT	3 cut(s)	244, 650, 727
AluI	AGCT	3 cut(s)	244, 650, 727
Alw26I	GTCTC	3 cut(s)	33, 363, 901
AlwI	GGATC	2 cut(s)	829, 1258
AlwNI	CAGNNNCTG	1 cut(s)	701
Ama87I	CYCGRG	2 cut(s)	146, 902
AoxI	GGCC	5 cut(s)	98, 577, 721, 913, 1033
ApeKI	GCWGC	2 cut(s)	35, 257
ApoI	RAATTY	5 cut(s)	18, 106, 491, 814, 1219
AspLEI	GCGC	1 cut(s)	43
AspS9I	GGNCC	1 cut(s)	1100
AsuC2I	CCSGG	4 cut(s)	136, 946, 1050, 1180
AsuHPI	GGTGA	3 cut(s)	40, 60, 815
AvaI	CYCGRG	2 cut(s)	146, 902
AvaII	GGWCC	1 cut(s)	1100
AxyI	CCTNAGG	1 cut(s)	681
BalI	TGGCCA	4 cut(s)	100, 579, 723, 915
BauI	CACGAG	1 cut(s)	30
BbsI	GAAGAC	1 cut(s)	326
BbvI	GCAGC	2 cut(s)	22, 244
BccI	CCATC	6 cut(s)	507, 514, 661, 699, 866, 987
BciT130I	CCWGG	4 cut(s)	576, 702, 912, 1264
BcnI	CCSGG	4 cut(s)	136, 946, 1050, 1180
BcoDI	GTCTC	3 cut(s)	33, 363, 901
BcuI	ACTAGT	1 cut(s)	1237
BfaI	CTAG	4 cut(s)	366, 1238, 1287, 1299
BfmI	CTRYAG	3 cut(s)	744, 864, 970
BfuAI	ACCTGC	2 cut(s)	79, 338
BglI	GCCNNNNNGGC	1 cut(s)	729
BisI	GCNGC	5 cut(s)	36, 39, 255, 258, 1209
BlsI	GCNGC	5 cut(s)	37, 40, 256, 259, 1210
BmcAI	AGTACT	1 cut(s)	311
Bme1390I	CCNGG	8 cut(s)	136, 576, 702, 912, 946, 1050, 1180, 1264
Bme18I	GGWCC	1 cut(s)	1100
BmeRI	GACNNNNNGTC	1 cut(s)	84
BmeT110I	CYCGRG	2 cut(s)	146, 902
BmgT120I	GGNCC	1 cut(s)	1100
BmiI	GGNNCC	5 cut(s)	328, 733, 856, 977, 1284
BmrFI	CCNGG	8 cut(s)	136, 576, 702, 912, 946, 1050, 1180, 1264
BmrI	ACTGGG	1 cut(s)	627
BmsI	GCATC	6 cut(s)	629, 1074, 1140, 1159, 1235, 1284
BmuI	ACTGGG	1 cut(s)	627
BpiI	GAAGAC	1 cut(s)	326
BpmI	CTGGAG	2 cut(s)	177, 993
BpuEI	CTTGAG	1 cut(s)	810
BpuMI	CCSGG	4 cut(s)	136, 946, 1050, 1180
BsaHI	GRCGYC	1 cut(s)	1199
BsaI	GGTCTC	1 cut(s)	901
BsaJI	CCNNGG	6 cut(s)	82, 135, 700, 799, 945, 1262
BsaWI	WCCGGW	2 cut(s)	237, 851
BsaXI	ACNNNNNCTCC	2 cut(s)	40, 70
Bsc4I	CCNNNNNNNGG	4 cut(s)	244, 261, 1126, 1179
Bse1I	ACTGG	4 cut(s)	160, 466, 633, 928
Bse21I	CCTNAGG	1 cut(s)	681
Bse3DI	GCAATG	2 cut(s)	99, 878
BseBI	CCWGG	4 cut(s)	576, 702, 912, 1264
BseDI	CCNNGG	6 cut(s)	82, 135, 700, 799, 945, 1262
BseGI	GGATG	7 cut(s)	226, 270, 361, 499, 710, 858, 982
BseLI	CCNNNNNNNGG	4 cut(s)	244, 261, 1126, 1179
BseMI	GCAATG	2 cut(s)	99, 878
BseMII	CTCAG	2 cut(s)	695, 912
BseNI	ACTGG	4 cut(s)	160, 466, 633, 928
BseRI	GAGGAG	2 cut(s)	612, 657
BseXI	GCAGC	2 cut(s)	22, 244
BseYI	CCCAGC	1 cut(s)	1174
BsgI	GTGCAG	1 cut(s)	1323
Bsh1236I	CGCG	1 cut(s)	41
Bsh1285I	CGRYCG	2 cut(s)	428, 1049
BshFI	GGCC	5 cut(s)	100, 579, 723, 915, 1035
BsiEI	CGRYCG	2 cut(s)	428, 1049
BsiHKCI	CYCGRG	2 cut(s)	146, 902
BsiSI	CCGG	7 cut(s)	15, 135, 238, 852, 945, 1049, 1180
BslFI	GGGAC	1 cut(s)	683
BslI	CCNNNNNNNGG	4 cut(s)	244, 261, 1126, 1179
BsmAI	GTCTC	3 cut(s)	33, 363, 901
BsmFI	GGGAC	1 cut(s)	683
BsnI	GGCC	5 cut(s)	100, 579, 723, 915, 1035
Bso31I	GGTCTC	1 cut(s)	901
BsoBI	CYCGRG	2 cut(s)	146, 902
Bsp143I	GATC	4 cut(s)	113, 435, 821, 1250
BspACI	CCGC	6 cut(s)	39, 255, 377, 767, 965, 1208
BspANI	GGCC	5 cut(s)	100, 579, 723, 915, 1035
BspCNI	CTCAG	2 cut(s)	694, 913
BspFNI	CGCG	1 cut(s)	41
BspLI	GGNNCC	5 cut(s)	328, 733, 856, 977, 1284
BspMAI	CTGCAG	1 cut(s)	748
BspMI	ACCTGC	2 cut(s)	79, 338
BspPI	GGATC	2 cut(s)	829, 1258
BspTNI	GGTCTC	1 cut(s)	901
BsrDI	GCAATG	2 cut(s)	99, 878
BsrI	ACTGG	4 cut(s)	160, 466, 633, 928
BssECI	CCNNGG	6 cut(s)	82, 135, 700, 799, 945, 1262
BssMI	GATC	4 cut(s)	113, 435, 821, 1250
BssNI	GRCGYC	1 cut(s)	1199
BssSI	CACGAG	1 cut(s)	30
BssT1I	CCWWGG	2 cut(s)	82, 799
Bst2BI	CACGAG	1 cut(s)	30
Bst2UI	CCWGG	4 cut(s)	576, 702, 912, 1264
Bst4CI	ACNGT	7 cut(s)	66, 556, 719, 776, 848, 1016, 1085
Bst6I	CTCTTC	1 cut(s)	385
BstACI	GRCGYC	1 cut(s)	1199
BstC8I	GCNNGC	6 cut(s)	246, 581, 644, 648, 725, 917
BstDEI	CTNAG	3 cut(s)	409, 681, 921
BstF5I	GGATG	7 cut(s)	226, 270, 361, 499, 710, 858, 982
BstFNI	CGCG	1 cut(s)	41
BstHHI	GCGC	1 cut(s)	43
BstKTI	GATC	4 cut(s)	116, 438, 824, 1253
BstMAI	GTCTC	3 cut(s)	33, 363, 901
BstMBI	GATC	4 cut(s)	113, 435, 821, 1250
BstMCI	CGRYCG	2 cut(s)	428, 1049
BstMWI	GCNNNNNNNGC	4 cut(s)	254, 383, 729, 1253
BstNI	CCWGG	4 cut(s)	576, 702, 912, 1264
BstNSI	RCATGY	1 cut(s)	351
BstSCI	CCNGG	8 cut(s)	134, 574, 700, 910, 944, 1048, 1178, 1262
BstSFI	CTRYAG	3 cut(s)	744, 864, 970
BstUI	CGCG	1 cut(s)	41
BstV1I	GCAGC	2 cut(s)	22, 244
BstV2I	GAAGAC	1 cut(s)	326
BstX2I	RGATCY	1 cut(s)	821
BstYI	RGATCY	1 cut(s)	821
Bsu36I	CCTNAGG	1 cut(s)	681
BsuRI	GGCC	5 cut(s)	100, 579, 723, 915, 1035
BtsCI	GGATG	7 cut(s)	226, 270, 361, 499, 710, 858, 982
BtsIMutI	CAGTG	3 cut(s)	62, 534, 724
BveI	ACCTGC	2 cut(s)	79, 338
Cac8I	GCNNGC	6 cut(s)	246, 581, 644, 648, 725, 917
CaiI	CAGNNNCTG	1 cut(s)	701
CfoI	GCGC	1 cut(s)	43
Cfr13I	GGNCC	1 cut(s)	1100
CseI	GACGC	2 cut(s)	62, 1143
Csp6I	GTAC	1 cut(s)	310
CviAII	CATG	4 cut(s)	25, 89, 348, 517
CviQI	GTAC	1 cut(s)	310
DdeI	CTNAG	3 cut(s)	409, 681, 921
DpnI	GATC	4 cut(s)	115, 437, 823, 1252
DpnII	GATC	4 cut(s)	113, 435, 821, 1250
DriI	GACNNNNNGTC	1 cut(s)	84
EaeI	YGGCCR	4 cut(s)	98, 577, 721, 913
Eam1104I	CTCTTC	1 cut(s)	385
Eam1105I	GACNNNNNGTC	1 cut(s)	84
EarI	CTCTTC	1 cut(s)	385
Eco130I	CCWWGG	2 cut(s)	82, 799
Eco147I	AGGCCT	1 cut(s)	1035
Eco31I	GGTCTC	1 cut(s)	901
Eco47I	GGWCC	1 cut(s)	1100
Eco57I	CTGAAG	1 cut(s)	338
Eco81I	CCTNAGG	1 cut(s)	681
Eco88I	CYCGRG	2 cut(s)	146, 902
EcoRI	GAATTC	1 cut(s)	18
EcoRII	CCWGG	4 cut(s)	574, 700, 910, 1262
EcoT14I	CCWWGG	2 cut(s)	82, 799
EcoT22I	ATGCAT	1 cut(s)	880
ErhI	CCWWGG	2 cut(s)	82, 799
FaeI	CATG	4 cut(s)	28, 92, 351, 520
FaqI	GGGAC	1 cut(s)	683
FatI	CATG	4 cut(s)	24, 88, 347, 516
FauI	CCCGC	2 cut(s)	370, 760
Fnu4HI	GCNGC	5 cut(s)	36, 39, 255, 258, 1209
FokI	GGATG	7 cut(s)	213, 277, 348, 486, 717, 845, 969
Fsp4HI	GCNGC	5 cut(s)	36, 39, 255, 258, 1209
FspBI	CTAG	4 cut(s)	366, 1238, 1287, 1299
GlaI	GCGC	1 cut(s)	42
GluI	GCNGC	5 cut(s)	36, 39, 255, 258, 1209
GsaI	CCCAGC	1 cut(s)	1178
GsuI	CTGGAG	2 cut(s)	177, 993
HaeIII	GGCC	5 cut(s)	100, 579, 723, 915, 1035
HapII	CCGG	7 cut(s)	15, 135, 238, 852, 945, 1049, 1180
HgaI	GACGC	2 cut(s)	62, 1143
HhaI	GCGC	1 cut(s)	43
Hin1I	GRCGYC	1 cut(s)	1199
Hin1II	CATG	4 cut(s)	28, 92, 351, 520
Hin6I	GCGC	1 cut(s)	41
HinP1I	GCGC	1 cut(s)	41
HinfI	GANTC	3 cut(s)	381, 751, 1024
HpaII	CCGG	7 cut(s)	15, 135, 238, 852, 945, 1049, 1180
HphI	GGTGA	3 cut(s)	40, 60, 815
Hpy166II	GTNNAC	2 cut(s)	638, 806
Hpy188I	TCNGA	5 cut(s)	185, 479, 780, 1100, 1282
Hpy188III	TCNNGA	6 cut(s)	146, 615, 819, 902, 1010, 1233
Hpy8I	GTNNAC	2 cut(s)	638, 806
Hpy99I	CGWCG	3 cut(s)	56, 1201, 1204
HpyAV	CCTTC	2 cut(s)	262, 1046
HpyCH4III	ACNGT	7 cut(s)	66, 556, 719, 776, 848, 1016, 1085
HpyCH4IV	ACGT	1 cut(s)	1199
HpyF10VI	GCNNNNNNNGC	4 cut(s)	254, 383, 729, 1253
HpyF3I	CTNAG	3 cut(s)	409, 681, 921
HpySE526I	ACGT	1 cut(s)	1199
Hsp92I	GRCGYC	1 cut(s)	1199
Hsp92II	CATG	4 cut(s)	28, 92, 351, 520
HspAI	GCGC	1 cut(s)	41
Kzo9I	GATC	4 cut(s)	113, 435, 821, 1250
LmnI	GCTCC	7 cut(s)	61, 341, 655, 670, 737, 1012, 1282
Lsp1109I	GCAGC	2 cut(s)	22, 244
LweI	GCATC	6 cut(s)	629, 1074, 1140, 1159, 1235, 1284
MaeI	CTAG	4 cut(s)	366, 1238, 1287, 1299
MaeII	ACGT	1 cut(s)	1199
MaeIII	GTNAC	4 cut(s)	46, 66, 601, 1079
MalI	GATC	4 cut(s)	115, 437, 823, 1252
MboI	GATC	4 cut(s)	113, 435, 821, 1250
MboII	GAAGA	6 cut(s)	331, 402, 1060, 1126, 1152, 1319
MflI	RGATCY	1 cut(s)	821
MlsI	TGGCCA	4 cut(s)	100, 579, 723, 915
MluCI	AATT	9 cut(s)	18, 106, 288, 491, 607, 658, 814, 999, 1219
MluNI	TGGCCA	4 cut(s)	100, 579, 723, 915
MlyI	GAGTC	2 cut(s)	760, 1033
MmeI	TCCRAC	2 cut(s)	590, 1260
MnlI	CCTC	8 cut(s)	70, 473, 590, 678, 690, 879, 987, 1321
Mox20I	TGGCCA	4 cut(s)	100, 579, 723, 915
Mph1103I	ATGCAT	1 cut(s)	880
MscI	TGGCCA	4 cut(s)	100, 579, 723, 915
MseI	TTAA	4 cut(s)	222, 401, 998, 1217
Msp20I	TGGCCA	4 cut(s)	100, 579, 723, 915
MspA1I	CMGCKG	2 cut(s)	257, 767
MspI	CCGG	7 cut(s)	15, 135, 238, 852, 945, 1049, 1180
MspR9I	CCNGG	8 cut(s)	136, 576, 702, 912, 946, 1050, 1180, 1264
MvaI	CCWGG	4 cut(s)	576, 702, 912, 1264
MvnI	CGCG	1 cut(s)	41
MwoI	GCNNNNNNNGC	4 cut(s)	254, 383, 729, 1253
NciI	CCSGG	4 cut(s)	136, 946, 1050, 1180
NdeII	GATC	4 cut(s)	113, 435, 821, 1250
NlaIII	CATG	4 cut(s)	28, 92, 351, 520
NlaIV	GGNNCC	5 cut(s)	328, 733, 856, 977, 1284
NmuCI	GTSAC	2 cut(s)	46, 66
NsiI	ATGCAT	1 cut(s)	880
NspI	RCATGY	1 cut(s)	351
PaqCI	CACCTGC	1 cut(s)	79
PceI	AGGCCT	1 cut(s)	1035
PfeI	GAWTC	1 cut(s)	381
PflMI	CCANNNNNTGG	1 cut(s)	1126
PkrI	GCNGC	5 cut(s)	37, 40, 256, 259, 1210
PleI	GAGTC	2 cut(s)	759, 1032
PpsI	GAGTC	2 cut(s)	759, 1032
Psp6I	CCWGG	4 cut(s)	574, 700, 910, 1262
PspFI	CCCAGC	1 cut(s)	1174
PspGI	CCWGG	4 cut(s)	574, 700, 910, 1262
PspN4I	GGNNCC	5 cut(s)	328, 733, 856, 977, 1284
PspPI	GGNCC	1 cut(s)	1100
PstI	CTGCAG	1 cut(s)	748
PstNI	CAGNNNCTG	1 cut(s)	701
PsuI	RGATCY	1 cut(s)	821
RsaI	GTAC	1 cut(s)	311
RsaNI	GTAC	1 cut(s)	310
SaqAI	TTAA	4 cut(s)	222, 401, 998, 1217
SatI	GCNGC	5 cut(s)	36, 39, 255, 258, 1209
Sau3AI	GATC	4 cut(s)	113, 435, 821, 1250
Sau96I	GGNCC	1 cut(s)	1100
ScaI	AGTACT	1 cut(s)	311
SchI	GAGTC	2 cut(s)	760, 1033
ScrFI	CCNGG	8 cut(s)	136, 576, 702, 912, 946, 1050, 1180, 1264
SfaNI	GCATC	6 cut(s)	629, 1074, 1140, 1159, 1235, 1284
SfcI	CTRYAG	3 cut(s)	744, 864, 970
SinI	GGWCC	1 cut(s)	1100
SmlI	CTYRAG	1 cut(s)	825
SmoI	CTYRAG	1 cut(s)	825
SpeI	ACTAGT	1 cut(s)	1237
Sse9I	AATT	9 cut(s)	18, 106, 288, 491, 607, 658, 814, 999, 1219
SseBI	AGGCCT	1 cut(s)	1035
SsiI	CCGC	6 cut(s)	39, 255, 377, 767, 965, 1208
SspMI	CTAG	4 cut(s)	366, 1238, 1287, 1299
StuI	AGGCCT	1 cut(s)	1035
StyD4I	CCNGG	8 cut(s)	134, 574, 700, 910, 944, 1048, 1178, 1262
StyI	CCWWGG	2 cut(s)	82, 799
TaaI	ACNGT	7 cut(s)	66, 556, 719, 776, 848, 1016, 1085
TaiI	ACGT	1 cut(s)	1202
TaqI	TCGA	5 cut(s)	9, 424, 438, 614, 1196
TaqII	GACCGA	1 cut(s)	442
TasI	AATT	9 cut(s)	18, 106, 288, 491, 607, 658, 814, 999, 1219
TatI	WGTACW	1 cut(s)	309
TauI	GCSGC	3 cut(s)	41, 257, 1211
TfiI	GAWTC	1 cut(s)	381
Tru1I	TTAA	4 cut(s)	222, 401, 998, 1217
Tru9I	TTAA	4 cut(s)	222, 401, 998, 1217
TscAI	CASTG	3 cut(s)	69, 534, 724
TseFI	GTSAC	2 cut(s)	46, 66
TseI	GCWGC	2 cut(s)	35, 257
Tsp45I	GTSAC	2 cut(s)	46, 66
TspDTI	ATGAA	7 cut(s)	119, 281, 347, 729, 953, 1203, 1263
TspGWI	ACGGA	1 cut(s)	724
TspRI	CASTG	3 cut(s)	69, 534, 724
Van91I	CCANNNNNTGG	1 cut(s)	1126
VpaK11BI	GGWCC	1 cut(s)	1100
XapI	RAATTY	5 cut(s)	18, 106, 491, 814, 1219
XceI	RCATGY	1 cut(s)	351
XspI	CTAG	4 cut(s)	366, 1238, 1287, 1299
ZraI	GACGTC	1 cut(s)	1200
ZrmI	AGTACT	1 cut(s)	311
Zsp2I	ATGCAT	1 cut(s)	880

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.