Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0011471

Physical Location & Seq

Genomic Coordinates Forward (+)

444440 .. 449652

Gene Structure 5213 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG006500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGTGGCAAATGAATTTGAGATCAAGTGAATCAATGGAACCTGGACCCTATCCTGAGCGAGCTGGAGAGCCAGATTGCTCTTATTACATCAGAACAGGCCTCTGTAGATTTGGGGCAACATGTCGCTTCAATCATCCTCCTAACCGAAAGCTGGCTATTGCCACTGCAAGAATGAAGGGGGAGTTCCCAGAAAGAATTGGACAACCTGAATGCCAGTATTACCTGAAGACAGGAACTTGCAAGTTCGGAGCGACATGCAAGTTTCATCATCCTAGAGACAAGGCAGGAATTGCTGGAAGAGTTGCCTTAAATATCTTAGGCTATCCACTTCGACCGAATGAGATTGAATGTGCATATTATTTACGAACTGGACAATGCAAGTTTGCAAGCACTTGTAAATTCCACCATCCACAACCTACTAATATGATGGTTTCATTAAGTGGTTCTCCTGTATATCCTACTGTTCAATCTCCAACTACACCTGGTCAGCAGTCATACCCGGGAGGAGTTACAAACTGGTCAAGAGCATCTTTTATTCCCAGTCCGCGTTGGCAAGGTCCATCAAGTTATGCTCCTCTTATTGTTCCTCAGGGAGTGGTATCAGTCCCGGGATGGAGCCCATACAGTGGCCAGGTCGGCTCCATTTCAACATCAGAGGGGCAGCAGCAAACGATAGGAAGTAGTCAGGTTTATGGAACTCCACGCCAACGTGAACCGGAAAATTCAGGATCTCAAGGGGCCTTTTCTTCATACCGGTCTGGCTCCATTCCTGTAGGGTTCTATGCATTGCAGAGGGAAAATGTATTTCCTGAGAGACCTGGCCAACCAGAGTGCCAGTTTTACATGAAGACAGGTGATTGTAAGTTTGGTGCGGTTTGTAGGTTCCATCATCCTAGGGAGCGATTAATTCCTGCTCCAGATTGTGTTTTGAGTCCAATAGGCCTTCCTTTGCGACCGGGAGAACCTTTGTGCATCTTTTATTCTCGTTATGGTATCTGTAAGTTTGGTCCGAGTTGCAAGTTTGACCACCCTATGGGTATCTTCACTTATAACCTTTCTGCTTCATCTTCGGCTGAGAGCCCTGTGCGGCGTTTGTTGGGGTCAACATCAGGCAGCACTTCATTAAATTTATCATCAGAAGGTCTAGTTGAAGCAGGATCAACAAAGCCAAGGAGACTTTCACTATCAGAGCCTAGGCAGATGCCTTCTGCAGATGAAAATATTGACACAGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010313 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016787 GO:0016788 GO:0017148 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048027 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

412

Amino Acids

45.29

Weight (kDa)

8.94

Isoelectric Point (pI)

59.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH	PF00642	23 - 47	6.7e-08	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	68 - 92	4.7e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	116 - 138	1.7e-07	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	273 - 299	6.3e-09	Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH	PF00642	319 - 345	1.5e-10	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02830 AT3G02830
fragaria_vesca	FvH4_6g00570 FvH4_6g00570
malus_domestica	MD04G1244100.v1.1 MD12G1259900.v1.1
prunus_persica	Prupe.6G360600_v2.0.a1
pyrus_communis	pycom04g21500 pycom12g23800
rosa_chinensis	RchiOBHm_Chr3g0447961
rosa_laevigata	RLG00000025957
rosa_multiflora	Rmu_co8476507.1_g000001
rosa_roxburghii	Rroxscaffold_6G00426150
rosa_rugosa	Rorug02G0607300 Rorug02G0607400
rosa_samantha	Rh3AG006600 Rh3BG006300 Rh3CG006500 Rh3DG006900
rosa_wichuraiana	Rw3G000530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1050
AccB7I	CCANNNNNTGG	2 cut(s)	626, 1033
AccII	CGCG	1 cut(s)	547
AciI	CCGC	3 cut(s)	545, 872, 1087
AclWI	GGATC	2 cut(s)	736, 1165
AcoI	YGGCCR	2 cut(s)	628, 820
AcsI	RAATTY	4 cut(s)	13, 398, 721, 1126
AcuI	CTGAAG	1 cut(s)	245
AfiI	CCNNNNNNNGG	3 cut(s)	151, 626, 1033
AflIII	ACRYGT	1 cut(s)	119
AgeI	ACCGGT	1 cut(s)	753
AgsI	TTSAA	5 cut(s)	130, 347, 467, 648, 1151
AjnI	CCWGG	4 cut(s)	40, 481, 630, 817
AjuI	GAANNNNNNNTTGG	2 cut(s)	1162, 1194
AluBI	AGCT	2 cut(s)	62, 151
AluI	AGCT	2 cut(s)	62, 151
Alw26I	GTCTC	3 cut(s)	270, 808, 1168
AlwI	GGATC	2 cut(s)	736, 1165
Ama87I	CYCGRG	2 cut(s)	499, 607
AoxI	GGCC	5 cut(s)	97, 628, 738, 820, 940
ApeKI	GCWGC	3 cut(s)	661, 664, 1113
ApoI	RAATTY	4 cut(s)	13, 398, 721, 1126
AseI	ATTAAT	1 cut(s)	905
AsiGI	ACCGGT	1 cut(s)	753
AspA2I	CCTAGG	2 cut(s)	893, 1193
AspS9I	GGNCC	4 cut(s)	44, 557, 738, 1007
AsuC2I	CCSGG	5 cut(s)	500, 501, 608, 609, 957
AsuHPI	GGTGA	1 cut(s)	866
AvaI	CYCGRG	2 cut(s)	499, 607
AvaII	GGWCC	3 cut(s)	44, 557, 1007
AvrII	CCTAGG	2 cut(s)	893, 1193
AxyI	CCTNAGG	1 cut(s)	588
BalI	TGGCCA	2 cut(s)	630, 822
BanII	GRGCYC	2 cut(s)	620, 1082
BbsI	GAAGAC	2 cut(s)	233, 854
BbvI	GCAGC	3 cut(s)	673, 676, 1125
BccI	CCATC	5 cut(s)	414, 421, 568, 606, 894
BciT130I	CCWGG	4 cut(s)	42, 483, 632, 819
BcnI	CCSGG	5 cut(s)	500, 501, 608, 609, 957
BcoDI	GTCTC	3 cut(s)	270, 808, 1168
BfaI	CTAG	4 cut(s)	273, 894, 1145, 1194
BfmI	CTRYAG	3 cut(s)	103, 771, 1209
BglI	GCCNNNNNGGC	1 cut(s)	636
BisI	GCNGC	4 cut(s)	662, 665, 1088, 1114
BlnI	CCTAGG	2 cut(s)	893, 1193
BlsI	GCNGC	4 cut(s)	663, 666, 1089, 1115
Bme1390I	CCNGG	9 cut(s)	42, 483, 500, 501, 608, 609, 632, 819, 957
Bme18I	GGWCC	3 cut(s)	44, 557, 1007
BmeT110I	CYCGRG	2 cut(s)	499, 607
BmgT120I	GGNCC	4 cut(s)	44, 557, 738, 1007
BmiI	GGNNCC	7 cut(s)	39, 46, 617, 640, 739, 763, 884
BmrFI	CCNGG	9 cut(s)	42, 483, 500, 501, 608, 609, 632, 819, 957
BmrI	ACTGGG	1 cut(s)	534
BmsI	GCATC	3 cut(s)	536, 981, 1191
BmuI	ACTGGG	1 cut(s)	534
BpiI	GAAGAC	2 cut(s)	233, 854
BpmI	CTGGAG	2 cut(s)	84, 900
Bpu10I	CCTNAGC	1 cut(s)	54
BpuEI	CTTGAG	1 cut(s)	717
BpuMI	CCSGG	5 cut(s)	500, 501, 608, 609, 957
BsaI	GGTCTC	1 cut(s)	808
BsaJI	CCNNGG	5 cut(s)	499, 607, 893, 1169, 1193
BsaWI	WCCGGW	2 cut(s)	715, 753
Bsc4I	CCNNNNNNNGG	3 cut(s)	151, 626, 1033
Bse118I	RCCGGY	1 cut(s)	753
Bse1I	ACTGG	5 cut(s)	214, 373, 521, 540, 835
Bse21I	CCTNAGG	1 cut(s)	588
Bse3DI	GCAATG	1 cut(s)	785
BseBI	CCWGG	4 cut(s)	42, 483, 632, 819
BseDI	CCNNGG	5 cut(s)	499, 607, 893, 1169, 1193
BseGI	GGATG	5 cut(s)	133, 268, 406, 617, 889
BseLI	CCNNNNNNNGG	3 cut(s)	151, 626, 1033
BseMI	GCAATG	1 cut(s)	785
BseMII	CTCAG	4 cut(s)	45, 602, 801, 1065
BseNI	ACTGG	5 cut(s)	214, 373, 521, 540, 835
BseRI	GAGGAG	2 cut(s)	519, 564
BseXI	GCAGC	3 cut(s)	673, 676, 1125
Bsh1236I	CGCG	1 cut(s)	547
Bsh1285I	CGRYCG	2 cut(s)	335, 956
BshFI	GGCC	5 cut(s)	99, 630, 740, 822, 942
BshTI	ACCGGT	1 cut(s)	753
BsiEI	CGRYCG	2 cut(s)	335, 956
BsiHKCI	CYCGRG	2 cut(s)	499, 607
BsiSI	CCGG	5 cut(s)	500, 608, 716, 754, 956
BslFI	GGGAC	1 cut(s)	590
BslI	CCNNNNNNNGG	3 cut(s)	151, 626, 1033
BsmAI	GTCTC	3 cut(s)	270, 808, 1168
BsmFI	GGGAC	1 cut(s)	590
BsmI	GAATGC	1 cut(s)	215
BsnI	GGCC	5 cut(s)	99, 630, 740, 822, 942
Bso31I	GGTCTC	1 cut(s)	808
BsoBI	CYCGRG	2 cut(s)	499, 607
Bsp1286I	GDGCHC	2 cut(s)	620, 1082
Bsp143I	GATC	3 cut(s)	20, 728, 1157
BspACI	CCGC	3 cut(s)	545, 872, 1087
BspANI	GGCC	5 cut(s)	99, 630, 740, 822, 942
BspCNI	CTCAG	4 cut(s)	46, 601, 802, 1066
BspFNI	CGCG	1 cut(s)	547
BspLI	GGNNCC	7 cut(s)	39, 46, 617, 640, 739, 763, 884
BspMAI	CTGCAG	1 cut(s)	1213
BspPI	GGATC	2 cut(s)	736, 1165
BspTNI	GGTCTC	1 cut(s)	808
BsrDI	GCAATG	1 cut(s)	785
BsrFI	RCCGGY	1 cut(s)	753
BsrI	ACTGG	5 cut(s)	214, 373, 521, 540, 835
BssAI	RCCGGY	1 cut(s)	753
BssECI	CCNNGG	5 cut(s)	499, 607, 893, 1169, 1193
BssMI	GATC	3 cut(s)	20, 728, 1157
BssT1I	CCWWGG	3 cut(s)	893, 1169, 1193
Bst2UI	CCWGG	4 cut(s)	42, 483, 632, 819
Bst4CI	ACNGT	2 cut(s)	463, 626
Bst6I	CTCTTC	1 cut(s)	292
BstAPI	GCANNNNNTGC	1 cut(s)	290
BstC8I	GCNNGC	3 cut(s)	60, 153, 388
BstDEI	CTNAG	5 cut(s)	54, 316, 588, 810, 1074
BstF5I	GGATG	5 cut(s)	133, 268, 406, 617, 889
BstFNI	CGCG	1 cut(s)	547
BstKTI	GATC	3 cut(s)	23, 731, 1160
BstMAI	GTCTC	3 cut(s)	270, 808, 1168
BstMBI	GATC	3 cut(s)	20, 728, 1157
BstMCI	CGRYCG	2 cut(s)	335, 956
BstMWI	GCNNNNNNNGC	2 cut(s)	290, 636
BstNI	CCWGG	4 cut(s)	42, 483, 632, 819
BstNSI	RCATGY	2 cut(s)	123, 258
BstSCI	CCNGG	9 cut(s)	40, 481, 498, 499, 606, 607, 630, 817, 955
BstSFI	CTRYAG	3 cut(s)	103, 771, 1209
BstUI	CGCG	1 cut(s)	547
BstV1I	GCAGC	3 cut(s)	673, 676, 1125
BstV2I	GAAGAC	2 cut(s)	233, 854
BstX2I	RGATCY	1 cut(s)	728
BstYI	RGATCY	1 cut(s)	728
Bsu36I	CCTNAGG	1 cut(s)	588
BsuRI	GGCC	5 cut(s)	99, 630, 740, 822, 942
BtsCI	GGATG	5 cut(s)	133, 268, 406, 617, 889
BtsI	GCAGTG	1 cut(s)	162
BtsIMutI	CAGTG	2 cut(s)	162, 631
Cac8I	GCNNGC	3 cut(s)	60, 153, 388
Cfr10I	RCCGGY	1 cut(s)	753
Cfr13I	GGNCC	4 cut(s)	44, 557, 738, 1007
Cfr9I	CCCGGG	2 cut(s)	499, 607
CsiI	ACCWGGT	1 cut(s)	481
CspAI	ACCGGT	1 cut(s)	753
CviAII	CATG	3 cut(s)	120, 255, 844
DdeI	CTNAG	5 cut(s)	54, 316, 588, 810, 1074
DpnI	GATC	3 cut(s)	22, 730, 1159
DpnII	GATC	3 cut(s)	20, 728, 1157
EaeI	YGGCCR	2 cut(s)	628, 820
Eam1104I	CTCTTC	1 cut(s)	292
EarI	CTCTTC	1 cut(s)	292
Eco130I	CCWWGG	3 cut(s)	893, 1169, 1193
Eco147I	AGGCCT	2 cut(s)	99, 942
Eco24I	GRGCYC	2 cut(s)	620, 1082
Eco31I	GGTCTC	1 cut(s)	808
Eco47I	GGWCC	3 cut(s)	44, 557, 1007
Eco57I	CTGAAG	1 cut(s)	245
Eco81I	CCTNAGG	1 cut(s)	588
Eco88I	CYCGRG	2 cut(s)	499, 607
EcoO109I	RGGNCCY	1 cut(s)	738
EcoRII	CCWGG	4 cut(s)	40, 481, 630, 817
EcoT14I	CCWWGG	3 cut(s)	893, 1169, 1193
EcoT22I	ATGCAT	1 cut(s)	787
EcoT38I	GRGCYC	2 cut(s)	620, 1082
ErhI	CCWWGG	3 cut(s)	893, 1169, 1193
FaeI	CATG	3 cut(s)	123, 258, 847
FalI	AAGNNNNNCTT	2 cut(s)	514, 546
FaqI	GGGAC	1 cut(s)	590
FatI	CATG	3 cut(s)	119, 254, 843
Fnu4HI	GCNGC	4 cut(s)	662, 665, 1088, 1114
FokI	GGATG	5 cut(s)	120, 255, 393, 624, 876
FriOI	GRGCYC	2 cut(s)	620, 1082
Fsp4HI	GCNGC	4 cut(s)	662, 665, 1088, 1114
FspBI	CTAG	4 cut(s)	273, 894, 1145, 1194
GluI	GCNGC	4 cut(s)	662, 665, 1088, 1114
GsuI	CTGGAG	2 cut(s)	84, 900
HaeIII	GGCC	5 cut(s)	99, 630, 740, 822, 942
HapII	CCGG	5 cut(s)	500, 608, 716, 754, 956
Hin1II	CATG	3 cut(s)	123, 258, 847
HincII	GTYRAC	1 cut(s)	1104
HindII	GTYRAC	1 cut(s)	1104
HinfI	GANTC	2 cut(s)	29, 931
HpaII	CCGG	5 cut(s)	500, 608, 716, 754, 956
HphI	GGTGA	1 cut(s)	866
Hpy166II	GTNNAC	2 cut(s)	713, 1104
Hpy188I	TCNGA	6 cut(s)	92, 248, 655, 1011, 1138, 1189
Hpy188III	TCNNGA	5 cut(s)	53, 522, 726, 809, 917
Hpy8I	GTNNAC	2 cut(s)	713, 1104
HpyAV	CCTTC	4 cut(s)	169, 953, 1133, 1215
HpyCH4III	ACNGT	2 cut(s)	463, 626
HpyCH4IV	ACGT	1 cut(s)	709
HpyF10VI	GCNNNNNNNGC	2 cut(s)	290, 636
HpyF3I	CTNAG	5 cut(s)	54, 316, 588, 810, 1074
HpySE526I	ACGT	1 cut(s)	709
Hsp92II	CATG	3 cut(s)	123, 258, 847
Kzo9I	GATC	3 cut(s)	20, 728, 1157
LmnI	GCTCC	7 cut(s)	248, 577, 615, 644, 767, 898, 919
Lsp1109I	GCAGC	3 cut(s)	673, 676, 1125
LweI	GCATC	3 cut(s)	536, 981, 1191
MabI	ACCWGGT	1 cut(s)	481
MaeI	CTAG	4 cut(s)	273, 894, 1145, 1194
MaeII	ACGT	1 cut(s)	709
MaeIII	GTNAC	1 cut(s)	508
MalI	GATC	3 cut(s)	22, 730, 1159
MboI	GATC	3 cut(s)	20, 728, 1157
MboII	GAAGA	6 cut(s)	238, 309, 738, 859, 1033, 1059
MflI	RGATCY	1 cut(s)	728
MhlI	GDGCHC	2 cut(s)	620, 1082
MlsI	TGGCCA	2 cut(s)	630, 822
MluCI	AATT	7 cut(s)	13, 195, 288, 398, 721, 906, 1126
MluNI	TGGCCA	2 cut(s)	630, 822
MlyI	GAGTC	1 cut(s)	940
MmeI	TCCRAC	1 cut(s)	497
MnlI	CCTC	8 cut(s)	110, 147, 497, 585, 597, 649, 786, 1225
Mox20I	TGGCCA	2 cut(s)	630, 822
Mph1103I	ATGCAT	1 cut(s)	787
MscI	TGGCCA	2 cut(s)	630, 822
MseI	TTAA	4 cut(s)	308, 437, 905, 1124
Msp20I	TGGCCA	2 cut(s)	630, 822
MspI	CCGG	5 cut(s)	500, 608, 716, 754, 956
MspR9I	CCNGG	9 cut(s)	42, 483, 500, 501, 608, 609, 632, 819, 957
Mva1269I	GAATGC	1 cut(s)	215
MvaI	CCWGG	4 cut(s)	42, 483, 632, 819
MvnI	CGCG	1 cut(s)	547
MwoI	GCNNNNNNNGC	2 cut(s)	290, 636
NciI	CCSGG	5 cut(s)	500, 501, 608, 609, 957
NdeII	GATC	3 cut(s)	20, 728, 1157
NlaIII	CATG	3 cut(s)	123, 258, 847
NlaIV	GGNNCC	7 cut(s)	39, 46, 617, 640, 739, 763, 884
NsiI	ATGCAT	1 cut(s)	787
NspI	RCATGY	2 cut(s)	123, 258
PceI	AGGCCT	2 cut(s)	99, 942
PciI	ACATGT	1 cut(s)	119
PctI	GAATGC	1 cut(s)	215
PfeI	GAWTC	1 cut(s)	29
PflMI	CCANNNNNTGG	2 cut(s)	626, 1033
PinAI	ACCGGT	1 cut(s)	753
PkrI	GCNGC	4 cut(s)	663, 666, 1089, 1115
PleI	GAGTC	1 cut(s)	939
PpsI	GAGTC	1 cut(s)	939
PscI	ACATGT	1 cut(s)	119
PshBI	ATTAAT	1 cut(s)	905
PsiI	TTATAA	1 cut(s)	1050
Psp6I	CCWGG	4 cut(s)	40, 481, 630, 817
PspGI	CCWGG	4 cut(s)	40, 481, 630, 817
PspN4I	GGNNCC	7 cut(s)	39, 46, 617, 640, 739, 763, 884
PspPI	GGNCC	4 cut(s)	44, 557, 738, 1007
PstI	CTGCAG	1 cut(s)	1213
PsuI	RGATCY	1 cut(s)	728
SaqAI	TTAA	4 cut(s)	308, 437, 905, 1124
SatI	GCNGC	4 cut(s)	662, 665, 1088, 1114
Sau3AI	GATC	3 cut(s)	20, 728, 1157
Sau96I	GGNCC	4 cut(s)	44, 557, 738, 1007
SchI	GAGTC	1 cut(s)	940
ScrFI	CCNGG	9 cut(s)	42, 483, 500, 501, 608, 609, 632, 819, 957
SduI	GDGCHC	2 cut(s)	620, 1082
SexAI	ACCWGGT	1 cut(s)	481
SfaNI	GCATC	3 cut(s)	536, 981, 1191
SfcI	CTRYAG	3 cut(s)	103, 771, 1209
SinI	GGWCC	3 cut(s)	44, 557, 1007
SmaI	CCCGGG	2 cut(s)	501, 609
SmlI	CTYRAG	1 cut(s)	732
SmoI	CTYRAG	1 cut(s)	732
Sse9I	AATT	7 cut(s)	13, 195, 288, 398, 721, 906, 1126
SseBI	AGGCCT	2 cut(s)	99, 942
SsiI	CCGC	3 cut(s)	545, 872, 1087
SspI	AATATT	1 cut(s)	1222
SspMI	CTAG	4 cut(s)	273, 894, 1145, 1194
StuI	AGGCCT	2 cut(s)	99, 942
StyD4I	CCNGG	9 cut(s)	40, 481, 498, 499, 606, 607, 630, 817, 955
StyI	CCWWGG	3 cut(s)	893, 1169, 1193
TaaI	ACNGT	2 cut(s)	463, 626
TaiI	ACGT	1 cut(s)	712
TaqI	TCGA	1 cut(s)	331
TaqII	GACCGA	1 cut(s)	349
TasI	AATT	7 cut(s)	13, 195, 288, 398, 721, 906, 1126
TauI	GCSGC	1 cut(s)	1090
TfiI	GAWTC	1 cut(s)	29
Tru1I	TTAA	4 cut(s)	308, 437, 905, 1124
Tru9I	TTAA	4 cut(s)	308, 437, 905, 1124
TscAI	CASTG	2 cut(s)	169, 631
TseI	GCWGC	3 cut(s)	661, 664, 1113
TspDTI	ATGAA	9 cut(s)	26, 188, 254, 423, 738, 860, 1053, 1110, 1230
TspMI	CCCGGG	2 cut(s)	499, 607
TspRI	CASTG	2 cut(s)	169, 631
Van91I	CCANNNNNTGG	2 cut(s)	626, 1033
VpaK11BI	GGWCC	3 cut(s)	44, 557, 1007
VspI	ATTAAT	1 cut(s)	905
XapI	RAATTY	4 cut(s)	13, 398, 721, 1126
XceI	RCATGY	2 cut(s)	123, 258
XmaI	CCCGGG	2 cut(s)	499, 607
XmaJI	CCTAGG	2 cut(s)	893, 1193
XspI	CTAG	4 cut(s)	273, 894, 1145, 1194
Zsp2I	ATGCAT	1 cut(s)	787

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.