Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0011283

Physical Location & Seq

Genomic Coordinates Forward (+)

17387271 .. 17388662

Gene Structure 1392 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1083200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1317 bp

ATGCCCGGGAGTTTAGAGCCGTTGGATTTGGGGGTACAGATACCATACCACTTTAGGTGTCCCATATCCTTAGAGCTCATGCGCGACCCCGTCACGGTCAGCACCGGCCAGACCTACGACCGTCCCAGCATCGAGTCTTGGGTCGCCACCGGCAACATCACCTGCCCCGTCACCCGGGCCCCGCTCTCCGACTTCACTCTCATTCCCAACCACACCCTCCGCCGCCTCATCCAGGAATGGTGCGTCGCCAACCGCTCTTTCGGCGTCGAGCGCATCCCCACTCCTAAACAGCCCGCCGACCCCACCCACATCCGCCACCTTCTTGCTCAATCTGCATCGAATTCCAACCCTTACCCGACCCGAGTCTCCGCCCTCCGCCGCCTGCGCGGCCTTGCCCGCGACCTCGACAAGAATCGCTCCACCATCTCCTCTCAAAACTCCCGCGAAATTCTCCTTGAGCTTGTGTTCTCCGATACCAATTCCGAATCGTCCGAGTTGACTCACGAGGCGCTCGCGCTTCTCGTTCTGTTCCCGCTCCTTGAGTCTGACTGCGCTGCGGTGGCGTCGGATCCTGACCGGGTCGCCTACCTGTCTCACCTTGTGCAGCACCCCTCCATGGAGGTCCGAGTCAACTCGGCCGCGTTGATCGAGAACGTCCTGGCCGGGTCGCGAACGGCGGAGCTACGAGCGCAGGTTAGCAATGTGGACGAAATCCACCACGGCGTCGTTTCAATTCTCCGAAATCCGATAGCCTACCCGCGCGCCCTCAAAATCGGCGTGAAGGCGGTCTTCGCTCTGTGTCTTGTGAAAGAGACCCGAAACAAGGCCGTATCGGCCGGCGCGCCCGAAACGTTAATCAACGTCTTGGCGGATTTCGAGAAATACGACTCGGAGCGTGCACTCGCGACGATCGAGCTGCTATGCAGAGTCCCCGAGGGTTGCGCGGCGTTTGCTGCGCACGGGCTGACTGTGCCACTGCTGGTGAAGACGATTCTGAAGATCTCGGACCGGGCGACGGAGTACGCGGCGGGAGCGCTGCTGTCGCTGTGCTCGGCGTCGGAGAAGAACCAAAACGAGGCCGTGGCGGCGGGGGTTCTGACCCAGCTGTTGCTGCTGGTACAGAGTGATTGCACGGAGCGAGCCAAGCGGAAGGCGCAGCTGCTGCTGAAGCTGCTTCGGGATTCGTGGCCCGAGGACTCTGTAGGAAATTCAGACGATTTCGTTTGCAGTGAGCTCGTAATTCTTAGTAGAAAAAAGAAAAAAAAAAGGAAAGTGAAAATGGAGGTTGTAGATTATTGGTATATAAAAAAATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009814 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

U-box

Protein Analysis

439

Amino Acids

48.34

Weight (kDa)

8.45

Isoelectric Point (pI)

42.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	14 - 85	2.7e-20	U-box domain
ARM_PUB	PF25598	104 - 407	2.4e-80	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49780
fragaria_vesca	FvH4_2g05820
malus_domestica	MD05G1083200.v1.1
prunus_persica	Prupe.8G127600_v2.0.a1
pyrus_communis	pycom05g08000
rosa_chinensis	RchiOBHm_Chr6g0257831 RchiOBHm_Chr7g0191621
rosa_laevigata	RLG00000005798 RLG00000014730 RLG00000015093
rosa_multiflora	Rmu_co8263605.1_g000001 Rmu_sc0000077.1_g000008
rosa_roxburghii	Rroxscaffold_2G00110230 Rroxscaffold_7G00165410
rosa_rugosa	Rorug05G0567500
rosa_samantha	Rh6AG084400 Rh6BG079100 Rh6CG073800 Rh6DG070700
rosa_wichuraiana	Rw6G007610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	170
Acc16I	TGCGCA	1 cut(s)	957
Acc36I	ACCTGC	2 cut(s)	170, 682
AccBSI	CCGCTC	3 cut(s)	184, 255, 535
AclI	AACGTT	1 cut(s)	851
AclWI	GGATC	2 cut(s)	563, 576
AcoI	YGGCCR	4 cut(s)	106, 636, 660, 834
AcsI	RAATTY	3 cut(s)	340, 447, 1207
AcuI	CTGAAG	2 cut(s)	1016, 1187
AcyI	GRCGYC	4 cut(s)	264, 563, 723, 1055
AdeI	CACNNNGTG	1 cut(s)	601
AfaI	GTAC	3 cut(s)	36, 1022, 1119
AfeI	AGCGCT	1 cut(s)	1035
AfiI	CCNNNNNNNGG	7 cut(s)	94, 174, 232, 616, 823, 1015, 1075
AgsI	TTSAA	1 cut(s)	732
AjnI	CCWGG	2 cut(s)	231, 657
AjuI	GAANNNNNNNTTGG	2 cut(s)	242, 274
AluBI	AGCT	8 cut(s)	76, 460, 682, 916, 1105, 1159, 1171, 1234
AluI	AGCT	8 cut(s)	76, 460, 682, 916, 1105, 1159, 1171, 1234
Alw21I	GWGCWC	4 cut(s)	78, 901, 1052, 1236
Alw26I	GTCTC	3 cut(s)	370, 597, 806
Alw44I	GTGCAC	1 cut(s)	897
AlwI	GGATC	2 cut(s)	563, 576
AlwNI	CAGNNNCTG	1 cut(s)	1162
Ama87I	CYCGRG	5 cut(s)	5, 174, 360, 932, 1190
Aor51HI	AGCGCT	1 cut(s)	1035
AoxI	GGCC	9 cut(s)	106, 177, 388, 636, 660, 825, 834, 1077, 1187
ApaI	GGGCCC	1 cut(s)	181
ApaLI	GTGCAC	1 cut(s)	897
ApoI	RAATTY	3 cut(s)	340, 447, 1207
AscI	GGCGCGCC	1 cut(s)	840
AspS9I	GGNCC	5 cut(s)	177, 178, 622, 1006, 1188
AsuC2I	CCSGG	7 cut(s)	6, 7, 175, 176, 578, 664, 1010
AsuHPI	GGTGA	4 cut(s)	151, 163, 587, 994
AvaI	CYCGRG	5 cut(s)	5, 174, 360, 932, 1190
AvaII	GGWCC	2 cut(s)	622, 1006
BaeGI	GKGCMC	2 cut(s)	181, 901
BamHI	GGATCC	1 cut(s)	568
BanII	GRGCYC	3 cut(s)	78, 181, 1236
BauI	CACGAG	1 cut(s)	503
BbsI	GAAGAC	2 cut(s)	781, 992
Bbv12I	GWGCWC	4 cut(s)	78, 901, 1052, 1236
BccI	CCATC	1 cut(s)	431
BceAI	ACGGC	5 cut(s)	4, 690, 736, 812, 1064
BcgI	CGANNNNNNTGC	4 cut(s)	898, 932, 1216, 1250
BciT130I	CCWGG	2 cut(s)	233, 659
BcnI	CCSGG	7 cut(s)	6, 7, 175, 176, 578, 664, 1010
BcoDI	GTCTC	3 cut(s)	370, 597, 806
BfmI	CTRYAG	1 cut(s)	1200
BfoI	RGCGCY	2 cut(s)	512, 1037
BfuAI	ACCTGC	2 cut(s)	170, 682
BglI	GCCNNNNNGGC	3 cut(s)	387, 833, 1085
BglII	AGATCT	1 cut(s)	999
Bme1390I	CCNGG	9 cut(s)	6, 7, 175, 176, 233, 578, 659, 664, 1010
Bme18I	GGWCC	2 cut(s)	622, 1006
BmeT110I	CYCGRG	5 cut(s)	5, 174, 360, 932, 1190
BmgT120I	GGNCC	5 cut(s)	177, 178, 622, 1006, 1188
BmiI	GGNNCC	3 cut(s)	179, 180, 570
BmrFI	CCNGG	9 cut(s)	6, 7, 175, 176, 233, 578, 659, 664, 1010
BmsI	GCATC	3 cut(s)	138, 282, 344
BoxI	GACNNNNGTC	1 cut(s)	362
BpiI	GAAGAC	2 cut(s)	781, 992
BpuEI	CTTGAG	2 cut(s)	476, 560
BpuMI	CCSGG	7 cut(s)	6, 7, 175, 176, 578, 664, 1010
BsaHI	GRCGYC	4 cut(s)	264, 563, 723, 1055
BsaI	GGTCTC	1 cut(s)	806
BsaJI	CCNNGG	7 cut(s)	5, 174, 615, 718, 933, 1080, 1191
Bsc4I	CCNNNNNNNGG	7 cut(s)	94, 174, 232, 616, 823, 1015, 1075
Bse118I	RCCGGY	3 cut(s)	104, 149, 836
Bse3DI	GCAATG	1 cut(s)	706
BseBI	CCWGG	2 cut(s)	233, 659
BseDI	CCNNGG	7 cut(s)	5, 174, 615, 718, 933, 1080, 1191
BseGI	GGATG	3 cut(s)	228, 273, 309
BseLI	CCNNNNNNNGG	7 cut(s)	94, 174, 232, 616, 823, 1015, 1075
BseMI	GCAATG	1 cut(s)	706
BsePI	GCGCGC	2 cut(s)	760, 840
BseRI	GAGGAG	1 cut(s)	418
BseSI	GKGCMC	2 cut(s)	181, 901
BseX3I	CGGCCG	2 cut(s)	636, 834
BseYI	CCCAGC	2 cut(s)	125, 1101
BsgI	GTGCAG	1 cut(s)	623
Bsh1285I	CGRYCG	4 cut(s)	121, 639, 837, 912
BshFI	GGCC	9 cut(s)	108, 179, 390, 638, 662, 827, 836, 1079, 1189
BsiEI	CGRYCG	4 cut(s)	121, 639, 837, 912
BsiHKAI	GWGCWC	4 cut(s)	78, 901, 1052, 1236
BsiHKCI	CYCGRG	5 cut(s)	5, 174, 360, 932, 1190
BsiSI	CCGG	8 cut(s)	6, 105, 150, 175, 577, 663, 837, 1009
BslFI	GGGAC	3 cut(s)	45, 108, 914
BslI	CCNNNNNNNGG	7 cut(s)	94, 174, 232, 616, 823, 1015, 1075
BsmAI	GTCTC	3 cut(s)	370, 597, 806
BsmFI	GGGAC	3 cut(s)	45, 108, 914
BsnI	GGCC	9 cut(s)	108, 179, 390, 638, 662, 827, 836, 1079, 1189
Bso31I	GGTCTC	1 cut(s)	806
BsoBI	CYCGRG	5 cut(s)	5, 174, 360, 932, 1190
Bsp120I	GGGCCC	1 cut(s)	177
Bsp1286I	GDGCHC	5 cut(s)	78, 181, 901, 1052, 1236
Bsp143I	GATC	4 cut(s)	568, 645, 909, 999
Bsp19I	CCATGG	1 cut(s)	615
Bsp68I	TCGCGA	2 cut(s)	670, 905
BspANI	GGCC	9 cut(s)	108, 179, 390, 638, 662, 827, 836, 1079, 1189
BspLI	GGNNCC	3 cut(s)	179, 180, 570
BspMI	ACCTGC	2 cut(s)	170, 682
BspPI	GGATC	2 cut(s)	563, 576
BspTNI	GGTCTC	1 cut(s)	806
BsrBI	CCGCTC	3 cut(s)	184, 255, 535
BsrDI	GCAATG	1 cut(s)	706
BsrFI	RCCGGY	3 cut(s)	104, 149, 836
BssAI	RCCGGY	3 cut(s)	104, 149, 836
BssECI	CCNNGG	7 cut(s)	5, 174, 615, 718, 933, 1080, 1191
BssHII	GCGCGC	2 cut(s)	760, 840
BssMI	GATC	4 cut(s)	568, 645, 909, 999
BssNI	GRCGYC	4 cut(s)	264, 563, 723, 1055
BssSI	CACGAG	1 cut(s)	503
BssT1I	CCWWGG	1 cut(s)	615
Bst2BI	CACGAG	1 cut(s)	503
Bst2UI	CCWGG	2 cut(s)	233, 659
Bst4CI	ACNGT	3 cut(s)	97, 122, 970
BstACI	GRCGYC	4 cut(s)	264, 563, 723, 1055
BstAPI	GCANNNNNTGC	1 cut(s)	1162
BstC8I	GCNNGC	9 cut(s)	294, 383, 397, 513, 762, 838, 842, 897, 1140
BstDEI	CTNAG	2 cut(s)	70, 1244
BstDSI	CCRYGG	3 cut(s)	615, 718, 1080
BstENI	CCTNNNNNAGG	1 cut(s)	230
BstF5I	GGATG	3 cut(s)	228, 273, 309
BstH2I	RGCGCY	2 cut(s)	512, 1037
BstKTI	GATC	4 cut(s)	571, 648, 912, 1002
BstMAI	GTCTC	3 cut(s)	370, 597, 806
BstMBI	GATC	4 cut(s)	568, 645, 909, 999
BstMCI	CGRYCG	4 cut(s)	121, 639, 837, 912
BstNI	CCWGG	2 cut(s)	233, 659
BstPAI	GACNNNNGTC	1 cut(s)	362
BstSCI	CCNGG	9 cut(s)	4, 5, 173, 174, 231, 576, 657, 662, 1008
BstSFI	CTRYAG	1 cut(s)	1200
BstSLI	GKGCMC	2 cut(s)	181, 901
BstV2I	GAAGAC	2 cut(s)	781, 992
BstX2I	RGATCY	2 cut(s)	568, 999
BstYI	RGATCY	2 cut(s)	568, 999
BstZI	CGGCCG	2 cut(s)	636, 834
BsuRI	GGCC	9 cut(s)	108, 179, 390, 638, 662, 827, 836, 1079, 1189
BtgI	CCRYGG	3 cut(s)	615, 718, 1080
BtsCI	GGATG	3 cut(s)	228, 273, 309
BtsI	GCAGTG	2 cut(s)	974, 1234
BtsIMutI	CAGTG	2 cut(s)	974, 1234
BtuMI	TCGCGA	2 cut(s)	670, 905
BveI	ACCTGC	2 cut(s)	170, 682
Cac8I	GCNNGC	9 cut(s)	294, 383, 397, 513, 762, 838, 842, 897, 1140
CaiI	CAGNNNCTG	1 cut(s)	1162
Cfr10I	RCCGGY	3 cut(s)	104, 149, 836
Cfr13I	GGNCC	5 cut(s)	177, 178, 622, 1006, 1188
Cfr9I	CCCGGG	2 cut(s)	5, 174
CpoI	CGGWCCG	1 cut(s)	1006
CseI	GACGC	5 cut(s)	232, 253, 552, 712, 1044
Csp6I	GTAC	3 cut(s)	35, 1021, 1118
CspI	CGGWCCG	1 cut(s)	1006
CviAII	CATG	2 cut(s)	79, 616
CviQI	GTAC	3 cut(s)	35, 1021, 1118
DdeI	CTNAG	2 cut(s)	70, 1244
DpnI	GATC	4 cut(s)	570, 647, 911, 1001
DpnII	GATC	4 cut(s)	568, 645, 909, 999
DraIII	CACNNNGTG	1 cut(s)	601
EaeI	YGGCCR	4 cut(s)	106, 636, 660, 834
EagI	CGGCCG	2 cut(s)	636, 834
EciI	GGCGGA	6 cut(s)	209, 302, 358, 365, 692, 884
Ecl136II	GAGCTC	2 cut(s)	76, 1234
EclXI	CGGCCG	2 cut(s)	636, 834
Eco130I	CCWWGG	1 cut(s)	615
Eco24I	GRGCYC	3 cut(s)	78, 181, 1236
Eco31I	GGTCTC	1 cut(s)	806
Eco47I	GGWCC	2 cut(s)	622, 1006
Eco47III	AGCGCT	1 cut(s)	1035
Eco52I	CGGCCG	2 cut(s)	636, 834
Eco53kI	GAGCTC	2 cut(s)	76, 1234
Eco57I	CTGAAG	2 cut(s)	1016, 1187
Eco88I	CYCGRG	5 cut(s)	5, 174, 360, 932, 1190
EcoICRI	GAGCTC	2 cut(s)	76, 1234
EcoNI	CCTNNNNNAGG	1 cut(s)	230
EcoO109I	RGGNCCY	1 cut(s)	178
EcoRI	GAATTC	1 cut(s)	340
EcoRII	CCWGG	2 cut(s)	231, 657
EcoT14I	CCWWGG	1 cut(s)	615
EcoT38I	GRGCYC	3 cut(s)	78, 181, 1236
ErhI	CCWWGG	1 cut(s)	615
FaeI	CATG	2 cut(s)	82, 619
FaiI	YATR	7 cut(s)	46, 65, 80, 617, 922, 1302, 1304
FalI	AAGNNNNNCTT	2 cut(s)	773, 805
FaqI	GGGAC	3 cut(s)	45, 108, 914
FatI	CATG	2 cut(s)	78, 615
FauI	CCCGC	8 cut(s)	189, 301, 404, 449, 540, 765, 1021, 1081
FokI	GGATG	3 cut(s)	215, 260, 296
FriOI	GRGCYC	3 cut(s)	78, 181, 1236
FspI	TGCGCA	1 cut(s)	957
GsaI	CCCAGC	2 cut(s)	129, 1105
HaeII	RGCGCY	2 cut(s)	512, 1037
HaeIII	GGCC	9 cut(s)	108, 179, 390, 638, 662, 827, 836, 1079, 1189
HapII	CCGG	8 cut(s)	6, 105, 150, 175, 577, 663, 837, 1009
HgaI	GACGC	5 cut(s)	232, 253, 552, 712, 1044
Hin1I	GRCGYC	4 cut(s)	264, 563, 723, 1055
Hin1II	CATG	2 cut(s)	82, 619
HincII	GTYRAC	2 cut(s)	498, 631
HindII	GTYRAC	2 cut(s)	498, 631
HpaII	CCGG	8 cut(s)	6, 105, 150, 175, 577, 663, 837, 1009
HphI	GGTGA	4 cut(s)	151, 163, 587, 994
Hpy166II	GTNNAC	4 cut(s)	498, 631, 706, 899
Hpy188III	TCNNGA	7 cut(s)	503, 572, 649, 669, 877, 904, 1178
Hpy8I	GTNNAC	4 cut(s)	498, 631, 706, 899
Hpy99I	CGWCG	7 cut(s)	248, 269, 568, 728, 910, 1018, 1060
HpyAV	CCTTC	3 cut(s)	329, 775, 1144
HpyCH4III	ACNGT	3 cut(s)	97, 122, 970
HpyCH4IV	ACGT	3 cut(s)	654, 851, 861
HpyCH4V	TGCA	6 cut(s)	335, 604, 899, 924, 1131, 1227
HpyF3I	CTNAG	2 cut(s)	70, 1244
HpySE526I	ACGT	3 cut(s)	654, 851, 861
Hsp92I	GRCGYC	4 cut(s)	264, 563, 723, 1055
Hsp92II	CATG	2 cut(s)	82, 619
KroI	GCCGGC	1 cut(s)	836
KroNI	GCCGGC	1 cut(s)	838
Kzo9I	GATC	4 cut(s)	568, 645, 909, 999
LmnI	GCTCC	6 cut(s)	422, 540, 679, 892, 1031, 1135
LweI	GCATC	3 cut(s)	138, 282, 344
MaeII	ACGT	3 cut(s)	654, 851, 861
MaeIII	GTNAC	2 cut(s)	91, 169
MalI	GATC	4 cut(s)	570, 647, 911, 1001
MbiI	CCGCTC	3 cut(s)	184, 255, 535
MboI	GATC	4 cut(s)	568, 645, 909, 999
MboII	GAAGA	4 cut(s)	781, 997, 1009, 1075
MflI	RGATCY	2 cut(s)	568, 999
MhlI	GDGCHC	5 cut(s)	78, 181, 901, 1052, 1236
MluCI	AATT	7 cut(s)	340, 447, 478, 732, 1207, 1239, 1310
MlyI	GAGTC	8 cut(s)	143, 372, 493, 551, 636, 881, 936, 1190
MmeI	TCCRAC	4 cut(s)	213, 369, 546, 1038
MroNI	GCCGGC	1 cut(s)	836
MseI	TTAA	1 cut(s)	854
MspA1I	CMGCKG	2 cut(s)	1105, 1159
MspI	CCGG	8 cut(s)	6, 105, 150, 175, 577, 663, 837, 1009
MspR9I	CCNGG	9 cut(s)	6, 7, 175, 176, 233, 578, 659, 664, 1010
MvaI	CCWGG	2 cut(s)	233, 659
NaeI	GCCGGC	1 cut(s)	838
NciI	CCSGG	7 cut(s)	6, 7, 175, 176, 578, 664, 1010
NcoI	CCATGG	1 cut(s)	615
NdeII	GATC	4 cut(s)	568, 645, 909, 999
NgoMIV	GCCGGC	1 cut(s)	836
NlaIII	CATG	2 cut(s)	82, 619
NlaIV	GGNNCC	3 cut(s)	179, 180, 570
NmeAIII	GCCGAG	2 cut(s)	614, 1031
NmuCI	GTSAC	2 cut(s)	91, 169
NruI	TCGCGA	2 cut(s)	670, 905
NsbI	TGCGCA	1 cut(s)	957
PalAI	GGCGCGCC	1 cut(s)	840
PaqCI	CACCTGC	1 cut(s)	170
PauI	GCGCGC	2 cut(s)	760, 840
PcsI	WCGNNNNNNNCGW	4 cut(s)	519, 882, 909, 1010
PdiI	GCCGGC	1 cut(s)	838
PfeI	GAWTC	4 cut(s)	412, 485, 991, 1181
PflFI	GACNNNGTC	2 cut(s)	89, 578
PfoI	TCCNGGA	1 cut(s)	231
Ple19I	CGATCG	1 cut(s)	912
PleI	GAGTC	8 cut(s)	142, 371, 493, 550, 635, 881, 935, 1190
PpsI	GAGTC	8 cut(s)	142, 371, 493, 550, 635, 881, 935, 1190
PshAI	GACNNNNGTC	1 cut(s)	362
Psp124BI	GAGCTC	2 cut(s)	78, 1236
Psp1406I	AACGTT	1 cut(s)	851
Psp6I	CCWGG	2 cut(s)	231, 657
PspFI	CCCAGC	2 cut(s)	125, 1101
PspGI	CCWGG	2 cut(s)	231, 657
PspN4I	GGNNCC	3 cut(s)	179, 180, 570
PspOMI	GGGCCC	1 cut(s)	177
PspPI	GGNCC	5 cut(s)	177, 178, 622, 1006, 1188
PstNI	CAGNNNCTG	1 cut(s)	1162
PsuI	RGATCY	2 cut(s)	568, 999
PsyI	GACNNNGTC	2 cut(s)	89, 578
PteI	GCGCGC	2 cut(s)	760, 840
PvuI	CGATCG	1 cut(s)	912
PvuII	CAGCTG	2 cut(s)	1105, 1159
RruI	TCGCGA	2 cut(s)	670, 905
RsaI	GTAC	3 cut(s)	36, 1022, 1119
RsaNI	GTAC	3 cut(s)	35, 1021, 1118
Rsr2I	CGGWCCG	1 cut(s)	1006
RsrII	CGGWCCG	1 cut(s)	1006
SacI	GAGCTC	2 cut(s)	78, 1236
SaqAI	TTAA	1 cut(s)	854
Sau3AI	GATC	4 cut(s)	568, 645, 909, 999
Sau96I	GGNCC	5 cut(s)	177, 178, 622, 1006, 1188
SchI	GAGTC	8 cut(s)	143, 372, 493, 551, 636, 881, 936, 1190
ScrFI	CCNGG	9 cut(s)	6, 7, 175, 176, 233, 578, 659, 664, 1010
SduI	GDGCHC	5 cut(s)	78, 181, 901, 1052, 1236
SfaNI	GCATC	3 cut(s)	138, 282, 344
SfcI	CTRYAG	1 cut(s)	1200
SfiI	GGCCNNNNNGGCC	1 cut(s)	833
SgsI	GGCGCGCC	1 cut(s)	840
SinI	GGWCC	2 cut(s)	622, 1006
SmaI	CCCGGG	2 cut(s)	7, 176
SmlI	CTYRAG	2 cut(s)	455, 539
SmoI	CTYRAG	2 cut(s)	455, 539
Sse9I	AATT	7 cut(s)	340, 447, 478, 732, 1207, 1239, 1310
SstI	GAGCTC	2 cut(s)	78, 1236
StyD4I	CCNGG	9 cut(s)	4, 5, 173, 174, 231, 576, 657, 662, 1008
StyI	CCWWGG	1 cut(s)	615
TaaI	ACNGT	3 cut(s)	97, 122, 970
TaiI	ACGT	3 cut(s)	657, 854, 864
TaqI	TCGA	7 cut(s)	132, 267, 338, 405, 648, 876, 912
TasI	AATT	7 cut(s)	340, 447, 478, 732, 1207, 1239, 1310
TauI	GCSGC	7 cut(s)	225, 381, 390, 641, 947, 1028, 1088
TfiI	GAWTC	4 cut(s)	412, 485, 991, 1181
Tru1I	TTAA	1 cut(s)	854
Tru9I	TTAA	1 cut(s)	854
TscAI	CASTG	2 cut(s)	981, 1234
TseFI	GTSAC	2 cut(s)	91, 169
Tsp45I	GTSAC	2 cut(s)	91, 169
TspGWI	ACGGA	2 cut(s)	1031, 1148
TspMI	CCCGGG	2 cut(s)	5, 174
TspRI	CASTG	2 cut(s)	981, 1234
Tth111I	GACNNNGTC	2 cut(s)	89, 578
VneI	GTGCAC	1 cut(s)	897
VpaK11BI	GGWCC	2 cut(s)	622, 1006
XagI	CCTNNNNNAGG	1 cut(s)	230
XapI	RAATTY	3 cut(s)	340, 447, 1207
XmaI	CCCGGG	2 cut(s)	5, 174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.