Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0011283

Physical Location & Seq

Genomic Coordinates Forward (+)

10748160 .. 10750110

Gene Structure 1951 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g08000.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGCTACTAAAAAGTTGTCCTCCCACCAAACACACCACACGTGTGGCCAAAGTTGGAGTCAGATGTATGTGGAGAGAGAGAGAGAGAGGCCTGTTGGGTTTGTCCCTCTGTTCCACTTGTTGTAATATAAAAGCCACCATATACCCAGCAAAGCGTAACTTAGCCAAATCCAAATCAGAATTTGCAGAGACCCCCCAAAGATTTAGCAACCAACAGAGAGAGAGAGACGCACAAATGCCCGGGAGTTTAGAGCCGTTGGATTTGGGGGTACAGATACCATACCACTTTAGGTGTCCCATATCCTTAGAGCTCATGCGCGACCCCGTCACGGTCAGCACCGGCCAGACCTACGACCGTCCCAGCATCGAGTCTTGGGTCGCCACCGGCAACATCACCTGCCCCGTCACCCGGGCCCCGCTCTCCGAATTCACTCTTATTCCCAACCACACCCTCCGCCGCCTCATCCAGGAATGGTGCGTCGCCAACCGCTCTTTCGGCGTCGAGCGCATTCCCACTCCTAAACAGCCCGCCGACCCCACCCACATCCGCCACCTTCTTGCTCAATCTGCATCGAATTCCAACCCTTACCCGACCCGAGTCTCCGCCCTCCGCCGCCTGCGCGGCCTTGCCCGCGACCTCGACAAGAATCGCTCCACCATCTCCTCTCAAAACTCCCGCGAAATTCTCCTTGAGCTCGTTTTCTCCGATACCAATTCCGAATCGTCCGAGTTGACTCACGAGGCGCTCGCGCTTCTCGTTCTGTTCCCGCTCCCTGAGTCCGACTGCGCTGCGGTGGCATCAGATCCTGACCGGGTCGCGTACCTGTCTCACCTTGTGCAGCACCCCTCCATGGAGGTCCGAGTCAACTCGGCCGCGTTGATCGAGAACGTCCTGGCCGGGTCGCGAACGGCGGAGCTACGAGCGCAGGTTAGCAATGTGGACGAAATCCACCACGGCGTCGTTTCAATTCTCCGAAATCCGATCGCCTACCCGCGCGCCCTCAAAATCGGCGTGAAGGCGGTCTTCGCTCTGTGTCTTGTGAAAGAGACCCGAAATAAGGCCGTATCGGCCGGCGCGCCCGAAACGTTAATCAACGTCTTGGCGGATTTCGAGAAATGCGACTCGGAGCGTGCACTCGCGACGATCGAGCTGCTATGCAGAGTCCCCGAGGGTTGCGCGGCGTTTGCTGCGCACGGGCTGACTGTGCCGCTGCTGGTGAAGACGATTCTGAAGATCTCGGACCGGGCGACGGAGTACGCGGCGGGAGCGCTGCTGTCGCTGTGCTCGGCGTCGGAGAAGAGCAAAAACGAGGCCGTGGCGGCGGGGGTTCTGACGCAGCTGTTGCTGTTGGTGCAGAGTGATTGTACGGAGCGGGCCAAGCGGAAGGCGCAGCTGCTGCTGAAGCTGCTTCGGGATTCGTGGCCCGAGGACTCTGTAGGAAATTCAGACGATTTCGTTTGCAGTGAGCTCGTAGTTTTCAGATTCTTAGTAGAAAAAAGAAAAAGAAAAAGGAAAGTGAAAATTGAGGTTGTAGGTTATTGGTATATAAAAAAATTGATTAAGAAAAGTTGCAAATTAAAATTTCAGAGGACAAAGTTTAAATGTGTTCTTCTCGTGAATTTTTTTTTTATTTTAATTTTTCAGGAAAAAAAAGAAAAGAAAAAACGAATGTTTAATTACATTTTCATACATAGAACTGCACTCATAAGTGAGACGAAAAATCCATTGGAGATTATGAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009814 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

U-box

Protein Analysis

581

Amino Acids

65.07

Weight (kDa)

9.5

Isoelectric Point (pI)

41.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49780
fragaria_vesca	FvH4_2g05820
malus_domestica	MD05G1083200.v1.1
prunus_persica	Prupe.8G127600_v2.0.a1
pyrus_communis	pycom05g08000
rosa_chinensis	RchiOBHm_Chr6g0257831 RchiOBHm_Chr7g0191621
rosa_laevigata	RLG00000005798 RLG00000014730 RLG00000015093
rosa_multiflora	Rmu_co8263605.1_g000001 Rmu_sc0000077.1_g000008
rosa_roxburghii	Rroxscaffold_2G00110230 Rroxscaffold_7G00165410
rosa_rugosa	Rorug05G0567500
rosa_samantha	Rh6AG084400 Rh6BG079100 Rh6CG073800 Rh6DG070700
rosa_wichuraiana	Rw6G007610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	404
Acc16I	TGCGCA	1 cut(s)	1191
Acc36I	ACCTGC	2 cut(s)	404, 916
AccBSI	CCGCTC	4 cut(s)	418, 489, 769, 1372
AclI	AACGTT	1 cut(s)	1085
AclWI	GGATC	1 cut(s)	797
AcoI	YGGCCR	5 cut(s)	45, 340, 870, 894, 1068
AcsI	RAATTY	7 cut(s)	179, 425, 574, 681, 1441, 1580, 1618
AcuI	CTGAAG	2 cut(s)	1250, 1421
AcvI	CACGTG	1 cut(s)	41
AcyI	GRCGYC	3 cut(s)	498, 957, 1289
AdeI	CACNNNGTG	1 cut(s)	835
AfaI	GTAC	4 cut(s)	270, 821, 1256, 1366
AfeI	AGCGCT	1 cut(s)	1269
AfiI	CCNNNNNNNGG	6 cut(s)	328, 408, 466, 850, 1057, 1249
AflIII	ACRYGT	2 cut(s)	38, 40
AgsI	TTSAA	1 cut(s)	966
AjnI	CCWGG	2 cut(s)	465, 891
AjuI	GAANNNNNNNTTGG	4 cut(s)	476, 508, 1709, 1741
AleI	CACNNNNGTG	1 cut(s)	41
AluBI	AGCT	8 cut(s)	310, 694, 916, 1150, 1339, 1393, 1405, 1468
AluI	AGCT	8 cut(s)	310, 694, 916, 1150, 1339, 1393, 1405, 1468
Alw21I	GWGCWC	5 cut(s)	312, 696, 1135, 1286, 1470
Alw26I	GTCTC	6 cut(s)	182, 219, 604, 831, 1040, 1706
Alw44I	GTGCAC	1 cut(s)	1131
AlwI	GGATC	1 cut(s)	797
AlwNI	CAGNNNCTG	2 cut(s)	806, 1396
Ama87I	CYCGRG	5 cut(s)	239, 408, 594, 1166, 1424
Aor51HI	AGCGCT	1 cut(s)	1269
ApaI	GGGCCC	1 cut(s)	415
ApaLI	GTGCAC	1 cut(s)	1131
ApoI	RAATTY	7 cut(s)	179, 425, 574, 681, 1441, 1580, 1618
ArsI	GACNNNNNNTTYG	2 cut(s)	42, 74
AscI	GGCGCGCC	1 cut(s)	1074
AspS9I	GGNCC	6 cut(s)	411, 412, 856, 1240, 1374, 1422
AsuC2I	CCSGG	7 cut(s)	240, 241, 409, 410, 812, 898, 1244
AsuHPI	GGTGA	4 cut(s)	385, 397, 821, 1228
AvaI	CYCGRG	5 cut(s)	239, 408, 594, 1166, 1424
AvaII	GGWCC	2 cut(s)	856, 1240
BaeGI	GKGCMC	2 cut(s)	415, 1135
BalI	TGGCCA	1 cut(s)	47
BanII	GRGCYC	4 cut(s)	312, 415, 696, 1470
BauI	CACGAG	2 cut(s)	737, 1613
BbrPI	CACGTG	1 cut(s)	41
BbsI	GAAGAC	2 cut(s)	1015, 1226
Bbv12I	GWGCWC	5 cut(s)	312, 696, 1135, 1286, 1470
BccI	CCATC	1 cut(s)	665
BceAI	ACGGC	5 cut(s)	238, 924, 970, 1046, 1298
BcgI	CGANNNNNNTGC	6 cut(s)	770, 804, 1132, 1166, 1450, 1484
BciT130I	CCWGG	2 cut(s)	467, 893
BcnI	CCSGG	7 cut(s)	240, 241, 409, 410, 812, 898, 1244
BcoDI	GTCTC	6 cut(s)	182, 219, 604, 831, 1040, 1706
BfmI	CTRYAG	1 cut(s)	1434
BfoI	RGCGCY	2 cut(s)	746, 1271
BfuAI	ACCTGC	2 cut(s)	404, 916
BglI	GCCNNNNNGGC	3 cut(s)	621, 1067, 1319
BglII	AGATCT	1 cut(s)	1233
Bme1390I	CCNGG	9 cut(s)	240, 241, 409, 410, 467, 812, 893, 898, 1244
Bme18I	GGWCC	2 cut(s)	856, 1240
BmeT110I	CYCGRG	5 cut(s)	239, 408, 594, 1166, 1424
BmgT120I	GGNCC	6 cut(s)	411, 412, 856, 1240, 1374, 1422
BmiI	GGNNCC	2 cut(s)	413, 414
BmrFI	CCNGG	9 cut(s)	240, 241, 409, 410, 467, 812, 893, 898, 1244
BmsI	GCATC	3 cut(s)	372, 578, 806
BoxI	GACNNNNGTC	1 cut(s)	596
BpiI	GAAGAC	2 cut(s)	1015, 1226
BpuEI	CTTGAG	1 cut(s)	710
BpuMI	CCSGG	7 cut(s)	240, 241, 409, 410, 812, 898, 1244
BsaAI	YACGTR	1 cut(s)	41
BsaHI	GRCGYC	3 cut(s)	498, 957, 1289
BsaI	GGTCTC	2 cut(s)	182, 1040
BsaJI	CCNNGG	7 cut(s)	239, 408, 849, 952, 1167, 1314, 1425
Bsc4I	CCNNNNNNNGG	6 cut(s)	328, 408, 466, 850, 1057, 1249
Bse118I	RCCGGY	3 cut(s)	338, 383, 1070
Bse3DI	GCAATG	1 cut(s)	940
BseBI	CCWGG	2 cut(s)	467, 893
BseDI	CCNNGG	7 cut(s)	239, 408, 849, 952, 1167, 1314, 1425
BseGI	GGATG	2 cut(s)	462, 543
BseLI	CCNNNNNNNGG	6 cut(s)	328, 408, 466, 850, 1057, 1249
BseMI	GCAATG	1 cut(s)	940
BseMII	CTCAG	1 cut(s)	765
BsePI	GCGCGC	2 cut(s)	994, 1074
BseRI	GAGGAG	1 cut(s)	652
BseSI	GKGCMC	2 cut(s)	415, 1135
BseX3I	CGGCCG	2 cut(s)	870, 1068
BseYI	CCCAGC	2 cut(s)	145, 359
BsgI	GTGCAG	3 cut(s)	857, 1373, 1683
Bsh1285I	CGRYCG	5 cut(s)	355, 873, 984, 1071, 1146
BsiEI	CGRYCG	5 cut(s)	355, 873, 984, 1071, 1146
BsiHKAI	GWGCWC	5 cut(s)	312, 696, 1135, 1286, 1470
BsiHKCI	CYCGRG	5 cut(s)	239, 408, 594, 1166, 1424
BsiSI	CCGG	8 cut(s)	240, 339, 384, 409, 811, 897, 1071, 1243
BslFI	GGGAC	4 cut(s)	88, 279, 342, 1148
BslI	CCNNNNNNNGG	6 cut(s)	328, 408, 466, 850, 1057, 1249
BsmAI	GTCTC	6 cut(s)	182, 219, 604, 831, 1040, 1706
BsmBI	CGTCTC	2 cut(s)	219, 1706
BsmFI	GGGAC	4 cut(s)	88, 279, 342, 1148
BsmI	GAATGC	1 cut(s)	507
Bso31I	GGTCTC	2 cut(s)	182, 1040
BsoBI	CYCGRG	5 cut(s)	239, 408, 594, 1166, 1424
Bsp120I	GGGCCC	1 cut(s)	411
Bsp1286I	GDGCHC	6 cut(s)	312, 415, 696, 1135, 1286, 1470
Bsp143I	GATC	5 cut(s)	802, 879, 981, 1143, 1233
Bsp19I	CCATGG	1 cut(s)	849
Bsp68I	TCGCGA	2 cut(s)	904, 1139
BspCNI	CTCAG	1 cut(s)	766
BspLI	GGNNCC	2 cut(s)	413, 414
BspMI	ACCTGC	2 cut(s)	404, 916
BspPI	GGATC	1 cut(s)	797
BspQI	GCTCTTC	1 cut(s)	1292
BspTNI	GGTCTC	2 cut(s)	182, 1040
BsrBI	CCGCTC	4 cut(s)	418, 489, 769, 1372
BsrDI	GCAATG	1 cut(s)	940
BsrFI	RCCGGY	3 cut(s)	338, 383, 1070
BssAI	RCCGGY	3 cut(s)	338, 383, 1070
BssECI	CCNNGG	7 cut(s)	239, 408, 849, 952, 1167, 1314, 1425
BssHII	GCGCGC	2 cut(s)	994, 1074
BssMI	GATC	5 cut(s)	802, 879, 981, 1143, 1233
BssNI	GRCGYC	3 cut(s)	498, 957, 1289
BssSI	CACGAG	2 cut(s)	737, 1613
BssT1I	CCWWGG	1 cut(s)	849
Bst2BI	CACGAG	2 cut(s)	737, 1613
Bst2UI	CCWGG	2 cut(s)	467, 893
Bst4CI	ACNGT	3 cut(s)	331, 356, 1204
Bst6I	CTCTTC	1 cut(s)	1292
BstACI	GRCGYC	3 cut(s)	498, 957, 1289
BstAPI	GCANNNNNTGC	2 cut(s)	1342, 1396
BstBAI	YACGTR	1 cut(s)	41
BstC8I	GCNNGC	9 cut(s)	528, 617, 631, 747, 996, 1072, 1076, 1131, 1374
BstDEI	CTNAG	4 cut(s)	160, 304, 774, 1486
BstDSI	CCRYGG	3 cut(s)	849, 952, 1314
BstENI	CCTNNNNNAGG	1 cut(s)	464
BstF5I	GGATG	2 cut(s)	462, 543
BstH2I	RGCGCY	2 cut(s)	746, 1271
BstKTI	GATC	5 cut(s)	805, 882, 984, 1146, 1236
BstMAI	GTCTC	6 cut(s)	182, 219, 604, 831, 1040, 1706
BstMBI	GATC	5 cut(s)	802, 879, 981, 1143, 1233
BstMCI	CGRYCG	5 cut(s)	355, 873, 984, 1071, 1146
BstNI	CCWGG	2 cut(s)	467, 893
BstPAI	GACNNNNGTC	1 cut(s)	596
BstSCI	CCNGG	9 cut(s)	238, 239, 407, 408, 465, 810, 891, 896, 1242
BstSFI	CTRYAG	1 cut(s)	1434
BstSLI	GKGCMC	2 cut(s)	415, 1135
BstV2I	GAAGAC	2 cut(s)	1015, 1226
BstX2I	RGATCY	2 cut(s)	802, 1233
BstXI	CCANNNNNNTGG	1 cut(s)	43
BstYI	RGATCY	2 cut(s)	802, 1233
BstZI	CGGCCG	2 cut(s)	870, 1068
BtgI	CCRYGG	3 cut(s)	849, 952, 1314
BtsCI	GGATG	2 cut(s)	462, 543
BtsI	GCAGTG	1 cut(s)	1468
BtsIMutI	CAGTG	1 cut(s)	1468
BtuMI	TCGCGA	2 cut(s)	904, 1139
BveI	ACCTGC	2 cut(s)	404, 916
Cac8I	GCNNGC	9 cut(s)	528, 617, 631, 747, 996, 1072, 1076, 1131, 1374
CaiI	CAGNNNCTG	2 cut(s)	806, 1396
Cfr10I	RCCGGY	3 cut(s)	338, 383, 1070
Cfr13I	GGNCC	6 cut(s)	411, 412, 856, 1240, 1374, 1422
Cfr9I	CCCGGG	2 cut(s)	239, 408
CpoI	CGGWCCG	1 cut(s)	1240
CseI	GACGC	6 cut(s)	236, 466, 487, 946, 1278, 1342
Csp6I	GTAC	4 cut(s)	269, 820, 1255, 1365
CspI	CGGWCCG	1 cut(s)	1240
CviAII	CATG	2 cut(s)	313, 850
CviQI	GTAC	4 cut(s)	269, 820, 1255, 1365
DdeI	CTNAG	4 cut(s)	160, 304, 774, 1486
DpnI	GATC	5 cut(s)	804, 881, 983, 1145, 1235
DpnII	GATC	5 cut(s)	802, 879, 981, 1143, 1233
DraI	TTTAAA	1 cut(s)	1600
DraIII	CACNNNGTG	1 cut(s)	835
EaeI	YGGCCR	5 cut(s)	45, 340, 870, 894, 1068
EagI	CGGCCG	2 cut(s)	870, 1068
Eam1104I	CTCTTC	1 cut(s)	1292
EarI	CTCTTC	1 cut(s)	1292
EciI	GGCGGA	6 cut(s)	443, 536, 592, 599, 926, 1118
Ecl136II	GAGCTC	3 cut(s)	310, 694, 1468
EclXI	CGGCCG	2 cut(s)	870, 1068
Eco130I	CCWWGG	1 cut(s)	849
Eco147I	AGGCCT	1 cut(s)	90
Eco24I	GRGCYC	4 cut(s)	312, 415, 696, 1470
Eco31I	GGTCTC	2 cut(s)	182, 1040
Eco47I	GGWCC	2 cut(s)	856, 1240
Eco47III	AGCGCT	1 cut(s)	1269
Eco52I	CGGCCG	2 cut(s)	870, 1068
Eco53kI	GAGCTC	3 cut(s)	310, 694, 1468
Eco57I	CTGAAG	2 cut(s)	1250, 1421
Eco72I	CACGTG	1 cut(s)	41
Eco88I	CYCGRG	5 cut(s)	239, 408, 594, 1166, 1424
EcoICRI	GAGCTC	3 cut(s)	310, 694, 1468
EcoNI	CCTNNNNNAGG	1 cut(s)	464
EcoO109I	RGGNCCY	1 cut(s)	412
EcoRI	GAATTC	2 cut(s)	425, 574
EcoRII	CCWGG	2 cut(s)	465, 891
EcoT14I	CCWWGG	1 cut(s)	849
EcoT38I	GRGCYC	4 cut(s)	312, 415, 696, 1470
ErhI	CCWWGG	1 cut(s)	849
Esp3I	CGTCTC	2 cut(s)	219, 1706
FaeI	CATG	2 cut(s)	316, 853
FalI	AAGNNNNNCTT	4 cut(s)	143, 175, 1007, 1039
FaqI	GGGAC	4 cut(s)	88, 279, 342, 1148
FatI	CATG	2 cut(s)	312, 849
FauI	CCCGC	9 cut(s)	423, 535, 638, 683, 774, 999, 1255, 1315, 1365
FokI	GGATG	2 cut(s)	449, 530
FriOI	GRGCYC	4 cut(s)	312, 415, 696, 1470
FspI	TGCGCA	1 cut(s)	1191
GsaI	CCCAGC	2 cut(s)	149, 363
HaeII	RGCGCY	2 cut(s)	746, 1271
HapII	CCGG	8 cut(s)	240, 339, 384, 409, 811, 897, 1071, 1243
HgaI	GACGC	6 cut(s)	236, 466, 487, 946, 1278, 1342
Hin1I	GRCGYC	3 cut(s)	498, 957, 1289
Hin1II	CATG	2 cut(s)	316, 853
HincII	GTYRAC	2 cut(s)	732, 865
HindII	GTYRAC	2 cut(s)	732, 865
HpaII	CCGG	8 cut(s)	240, 339, 384, 409, 811, 897, 1071, 1243
HphI	GGTGA	4 cut(s)	385, 397, 821, 1228
Hpy166II	GTNNAC	4 cut(s)	732, 865, 940, 1133
Hpy188III	TCNNGA	9 cut(s)	737, 806, 883, 903, 1111, 1138, 1412, 1615, 1643
Hpy8I	GTNNAC	4 cut(s)	732, 865, 940, 1133
Hpy99I	CGWCG	6 cut(s)	482, 503, 962, 1144, 1252, 1294
HpyAV	CCTTC	3 cut(s)	563, 1009, 1378
HpyCH4III	ACNGT	3 cut(s)	331, 356, 1204
HpyCH4IV	ACGT	4 cut(s)	40, 888, 1085, 1095
HpyCH4V	TGCA	9 cut(s)	185, 569, 838, 1133, 1158, 1354, 1461, 1572, 1700
HpyF3I	CTNAG	4 cut(s)	160, 304, 774, 1486
HpySE526I	ACGT	4 cut(s)	40, 888, 1085, 1095
Hsp92I	GRCGYC	3 cut(s)	498, 957, 1289
Hsp92II	CATG	2 cut(s)	316, 853
KroI	GCCGGC	1 cut(s)	1070
KroNI	GCCGGC	1 cut(s)	1072
Kzo9I	GATC	5 cut(s)	802, 879, 981, 1143, 1233
LguI	GCTCTTC	1 cut(s)	1292
LmnI	GCTCC	6 cut(s)	656, 774, 913, 1126, 1265, 1369
LweI	GCATC	3 cut(s)	372, 578, 806
MaeII	ACGT	4 cut(s)	40, 888, 1085, 1095
MaeIII	GTNAC	3 cut(s)	155, 325, 403
MalI	GATC	5 cut(s)	804, 881, 983, 1145, 1235
MbiI	CCGCTC	4 cut(s)	418, 489, 769, 1372
MboI	GATC	5 cut(s)	802, 879, 981, 1143, 1233
MboII	GAAGA	5 cut(s)	1015, 1231, 1243, 1309, 1601
MflI	RGATCY	2 cut(s)	802, 1233
MhlI	GDGCHC	6 cut(s)	312, 415, 696, 1135, 1286, 1470
MlsI	TGGCCA	1 cut(s)	47
MluNI	TGGCCA	1 cut(s)	47
MlyI	GAGTC	9 cut(s)	66, 377, 606, 727, 785, 870, 1115, 1170, 1424
MmeI	TCCRAC	5 cut(s)	34, 237, 603, 804, 1272
Mox20I	TGGCCA	1 cut(s)	47
MroNI	GCCGGC	1 cut(s)	1070
MscI	TGGCCA	1 cut(s)	47
MseI	TTAA	6 cut(s)	1088, 1560, 1577, 1599, 1634, 1674
MslI	CAYNNNNRTG	1 cut(s)	41
Msp20I	TGGCCA	1 cut(s)	47
MspA1I	CMGCKG	3 cut(s)	1210, 1339, 1393
MspI	CCGG	8 cut(s)	240, 339, 384, 409, 811, 897, 1071, 1243
MspR9I	CCNGG	9 cut(s)	240, 241, 409, 410, 467, 812, 893, 898, 1244
Mva1269I	GAATGC	1 cut(s)	507
MvaI	CCWGG	2 cut(s)	467, 893
NaeI	GCCGGC	1 cut(s)	1072
NciI	CCSGG	7 cut(s)	240, 241, 409, 410, 812, 898, 1244
NcoI	CCATGG	1 cut(s)	849
NdeII	GATC	5 cut(s)	802, 879, 981, 1143, 1233
NgoMIV	GCCGGC	1 cut(s)	1070
NlaIII	CATG	2 cut(s)	316, 853
NlaIV	GGNNCC	2 cut(s)	413, 414
NmeAIII	GCCGAG	2 cut(s)	848, 1265
NmuCI	GTSAC	2 cut(s)	325, 403
NruI	TCGCGA	2 cut(s)	904, 1139
NsbI	TGCGCA	1 cut(s)	1191
OliI	CACNNNNGTG	1 cut(s)	41
PalAI	GGCGCGCC	1 cut(s)	1074
PaqCI	CACCTGC	1 cut(s)	404
PauI	GCGCGC	2 cut(s)	994, 1074
PceI	AGGCCT	1 cut(s)	90
PciSI	GCTCTTC	1 cut(s)	1292
PcsI	WCGNNNNNNNCGW	5 cut(s)	702, 753, 1116, 1143, 1244
PctI	GAATGC	1 cut(s)	507
PdiI	GCCGGC	1 cut(s)	1072
PfeI	GAWTC	5 cut(s)	646, 719, 1225, 1415, 1482
PflFI	GACNNNGTC	2 cut(s)	323, 812
PfoI	TCCNGGA	1 cut(s)	465
Ple19I	CGATCG	2 cut(s)	984, 1146
PleI	GAGTC	9 cut(s)	65, 376, 605, 727, 784, 869, 1115, 1169, 1424
PmaCI	CACGTG	1 cut(s)	41
PmlI	CACGTG	1 cut(s)	41
PpsI	GAGTC	9 cut(s)	65, 376, 605, 727, 784, 869, 1115, 1169, 1424
Ppu21I	YACGTR	1 cut(s)	41
PshAI	GACNNNNGTC	1 cut(s)	596
Psp124BI	GAGCTC	3 cut(s)	312, 696, 1470
Psp1406I	AACGTT	1 cut(s)	1085
Psp6I	CCWGG	2 cut(s)	465, 891
PspCI	CACGTG	1 cut(s)	41
PspFI	CCCAGC	2 cut(s)	145, 359
PspGI	CCWGG	2 cut(s)	465, 891
PspN4I	GGNNCC	2 cut(s)	413, 414
PspOMI	GGGCCC	1 cut(s)	411
PspPI	GGNCC	6 cut(s)	411, 412, 856, 1240, 1374, 1422
PstNI	CAGNNNCTG	2 cut(s)	806, 1396
PsuI	RGATCY	2 cut(s)	802, 1233
PsyI	GACNNNGTC	2 cut(s)	323, 812
PteI	GCGCGC	2 cut(s)	994, 1074
PvuI	CGATCG	2 cut(s)	984, 1146
PvuII	CAGCTG	2 cut(s)	1339, 1393
RruI	TCGCGA	2 cut(s)	904, 1139
RsaI	GTAC	4 cut(s)	270, 821, 1256, 1366
RsaNI	GTAC	4 cut(s)	269, 820, 1255, 1365
RseI	CAYNNNNRTG	1 cut(s)	41
Rsr2I	CGGWCCG	1 cut(s)	1240
RsrII	CGGWCCG	1 cut(s)	1240
SacI	GAGCTC	3 cut(s)	312, 696, 1470
SapI	GCTCTTC	1 cut(s)	1292
SaqAI	TTAA	6 cut(s)	1088, 1560, 1577, 1599, 1634, 1674
Sau3AI	GATC	5 cut(s)	802, 879, 981, 1143, 1233
Sau96I	GGNCC	6 cut(s)	411, 412, 856, 1240, 1374, 1422
SchI	GAGTC	9 cut(s)	66, 377, 606, 727, 785, 870, 1115, 1170, 1424
ScrFI	CCNGG	9 cut(s)	240, 241, 409, 410, 467, 812, 893, 898, 1244
SduI	GDGCHC	6 cut(s)	312, 415, 696, 1135, 1286, 1470
SfaNI	GCATC	3 cut(s)	372, 578, 806
SfcI	CTRYAG	1 cut(s)	1434
SfiI	GGCCNNNNNGGCC	1 cut(s)	1067
SgsI	GGCGCGCC	1 cut(s)	1074
SinI	GGWCC	2 cut(s)	856, 1240
SmaI	CCCGGG	2 cut(s)	241, 410
SmiMI	CAYNNNNRTG	1 cut(s)	41
SmlI	CTYRAG	1 cut(s)	689
SmoI	CTYRAG	1 cut(s)	689
SseBI	AGGCCT	1 cut(s)	90
SstI	GAGCTC	3 cut(s)	312, 696, 1470
StuI	AGGCCT	1 cut(s)	90
StyD4I	CCNGG	9 cut(s)	238, 239, 407, 408, 465, 810, 891, 896, 1242
StyI	CCWWGG	1 cut(s)	849
TaaI	ACNGT	3 cut(s)	331, 356, 1204
TaiI	ACGT	4 cut(s)	43, 891, 1088, 1098
TaqI	TCGA	7 cut(s)	366, 501, 572, 639, 882, 1110, 1146
TauI	GCSGC	8 cut(s)	459, 615, 624, 875, 1181, 1210, 1262, 1322
TfiI	GAWTC	5 cut(s)	646, 719, 1225, 1415, 1482
Tru1I	TTAA	6 cut(s)	1088, 1560, 1577, 1599, 1634, 1674
Tru9I	TTAA	6 cut(s)	1088, 1560, 1577, 1599, 1634, 1674
TscAI	CASTG	1 cut(s)	1468
TseFI	GTSAC	2 cut(s)	325, 403
Tsp45I	GTSAC	2 cut(s)	325, 403
TspDTI	ATGAA	1 cut(s)	1675
TspGWI	ACGGA	2 cut(s)	1265, 1382
TspMI	CCCGGG	2 cut(s)	239, 408
TspRI	CASTG	1 cut(s)	1468
Tth111I	GACNNNGTC	2 cut(s)	323, 812
VneI	GTGCAC	1 cut(s)	1131
VpaK11BI	GGWCC	2 cut(s)	856, 1240
XagI	CCTNNNNNAGG	1 cut(s)	464
XapI	RAATTY	7 cut(s)	179, 425, 574, 681, 1441, 1580, 1618
XmaI	CCCGGG	2 cut(s)	239, 408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.