Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0004418

Physical Location & Seq

Genomic Coordinates Reverse (-)

28410054 .. 28413413

Gene Structure 3360 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1153300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGGCTTTTTCGATGTATATGTTGTTGAATGGACGAGATCCTGGTATTTTCTTTGGTGGTGTGGTCTGGTTATTGCTTAGTTGTAGTTTCAGCTTTGCTGTTGAGAGTGATATAAACTGCTTGAAAAGTCTAAAAGCATCGCTTCAGGATCCTTTAGGCTACTTAAACTCATCATGGGATTTCAACAATAAGACCGAAGGTTTCATCTGTAACTTTCTGGGAATCGAGTGTTGGCACCCTCATGAAAGCAAAGTTTTAAATATCAAGCTTTCGGATTTGGGACTCAAGGGCCCGTTTCCTCGGAGTGTAGCAAATTGCACAAGCTTAACAGGATTAGATCTTTCGAGCAACAAGCTCAGTGGACCTCTTCCTGAAGATATTGGTAGAATTATTTCGTTCATTACAACTCTTGATCTTTCATCTAACAGCTTCTCAGGGCATATCCCAACGAATCTTTCCAATTGTAGCTATTTGAATGTGCTTAAGCTTGACAGCAACCAGTTGAACGGTAGCATCCCTCTACAGCTTGGTCAGCTCGGTAGGATTAAATCATTTAGCGTGGCAAACAATCAGCTGTCTGGCCAAGTCCCAAACTTTGGTAACAATAGTGCAGTTACACTAGAAAGTTACGCAAACAATGCTGGACTTTGTGGGAAGCCTCTTGATCTGTGCCGGGGAGTTAAAAAGAAGTCTAACAGTGTAATTATTGTGGCAGCTGGTGTTGGTGGTGCAACGTTTGCAGCACTAATTGTGGTTATTTCCTTGTTGTTCTTTGTGCGTAGAGTGTCTGCAAGGAAGAAGGAAGAGGACCCTGAAGGGAACAAGTGGGCTAAGAGTTTGAAGAAAACGAAAGCCATCAAGGTTTCCATGTTTGAGAAGTCGATTTCTAAAATGAAGCTGAGTGATCTCATGAGGGCCAGCAACAGTTTCTGCAAAGATAATATCATTGGGACAGGAAGAACTGGAACGATGTACAAAGCAGTGCTCGATGATGGCACTCCACTTATGGTCAAGAGGTTGCAGGAATCTCAACATTCTGAGAAAGAATTTCTGTCTGAGATGGCTACTTTGGGAAATATAGGGCACCGTAATTTGGTTCCTCTTTTAGGGTTTTGCACAGCAAAGAGGGAAAGACTTTTGGTCTATAGGTACATGCCTAATGGTACCCTCCACGATCAGCTACATCCTGCAGATGCTGAAGGTGCAAAGATTATGGACTGGCCAACTAGGCTAAAAATTGGGATAGGGGCAGCCAGAGGATTAGCATGGCTCCACCATAACTGCAATCCTCGAATTATCCACCGGAACATAAGCTCCAAATGCATCTTACTGGATGCAGATTTTGAGCCCAGAATATCTGAATTTGGACTAGCTAGGCTCATGAATCCAATTGATACACATTTGAGTACGTTTGTGAATGGGGAGTTTGGGGATCTCGGATATGTTGCTCCTGAGTATACACGAACTCTAGTGGCCACTCCAAAGGGAGATGTTTACAGTTTCGGAACTGTACTTCTTGAGTTGGTGACCGGTGAGAGAGCTACCCACATTTCTAAAGCCCCTGAAGACTTCAAGGGAAATTTGGTGGAATGGATTACACAGCTGTCAGGCAAATCTCAACTCCAGGATGCGCTCGACAAATCTTTGGTTGGGAAGGGTGTGAATGAGGAGCTTTTCCAGTTTCTTAAAGTTGCGTGCAACTGTGTGGGGCCTATTGCTAAGGAGAGGCCTACTATGTTTGAAGTGTACCAGCTTCTAAGGGCCATAGGGGAGAAATATAACTTCACAATCGAAGACGACATGCTGATGCCAACAGACAATGGTGATGGTGATGGTAATGGCGAACTTATTGTTGCTCGAGAGATGATTGAGATGACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0031348 GO:0033612 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0060548 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

627

Amino Acids

68.77

Weight (kDa)

8.09

Isoelectric Point (pI)

30.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	313 - 514	1.2e-33	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	313 - 583	7e-31	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004418)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48380
fragaria_vesca	FvH4_2g17440 FvH4_2g17440 FvH4_2g17440
malus_domestica	MD05G1153300.v1.1
prunus_persica	Prupe.8G186700_v2.0.a1
pyrus_communis	pycom05g14770 pycom10g12770
rosa_chinensis	RchiOBHm_Chr6g0248541 RchiOBHm_Chr6g0282151
rosa_laevigata	RLG00000012905 RLG00000015144
rosa_multiflora	Rmu_sc0002553.1_g000025 Rmu_sc0002553.1_g000026 Rmu_sc0011940.1_g000001 Rmu_sc0021471.1_g000006
rosa_roxburghii	Rroxscaffold_7G00186440 Rroxscaffold_7G00213230
rosa_rugosa	Rorug05G0532000 Rorug06G0145800
rosa_samantha	Rh6AG048900 Rh6AG258800 Rh6BG044100 Rh6BG044400 Rh6BG262100 Rh6CG041000 Rh6CG261100 Rh6DG037200 Rh6DG253100
rosa_wichuraiana	Rw6G004150 Rw6G004230 Rw6G022400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1163
AccB1I	GGYRCC	3 cut(s)	234, 1083, 1163
AccB7I	CCANNNNNTGG	1 cut(s)	596
AccI	GTMKAC	1 cut(s)	1457
AclI	AACGTT	1 cut(s)	734
AclWI	GGATC	4 cut(s)	32, 143, 156, 1440
AcoI	YGGCCR	3 cut(s)	580, 1220, 1473
AcsI	RAATTY	3 cut(s)	1046, 1361, 1579
AcuI	CTGAAG	5 cut(s)	128, 393, 834, 1218, 1584
AfaI	GTAC	6 cut(s)	974, 1151, 1165, 1408, 1512, 1748
AfiI	CCNNNNNNNGG	3 cut(s)	596, 1093, 1106
AflII	CTTAAG	1 cut(s)	482
AgeI	ACCGGT	1 cut(s)	1529
AgsI	TTSAA	8 cut(s)	28, 124, 184, 475, 505, 841, 1573, 1742
AhdI	GACNNNNNGTC	1 cut(s)	1139
AjnI	CCWGG	2 cut(s)	40, 1623
AjuI	GAANNNNNNNTTGG	4 cut(s)	214, 246, 439, 471
AloI	GAACNNNNNNTCC	2 cut(s)	1298, 1330
Alw21I	GWGCWC	1 cut(s)	987
AlwI	GGATC	4 cut(s)	32, 143, 156, 1440
AlwNI	CAGNNNCTG	2 cut(s)	930, 1196
Ama87I	CYCGRG	1 cut(s)	1857
AoxI	GGCC	8 cut(s)	289, 580, 915, 1220, 1473, 1709, 1727, 1761
ApaI	GGGCCC	1 cut(s)	293
ApeKI	GCWGC	3 cut(s)	713, 740, 1250
ApoI	RAATTY	3 cut(s)	1046, 1361, 1579
AsiGI	ACCGGT	1 cut(s)	1529
Asp700I	GAANNNNTTC	1 cut(s)	391
Asp718I	GGTACC	1 cut(s)	1163
AspLEI	GCGC	1 cut(s)	1633
AspS9I	GGNCC	7 cut(s)	289, 290, 362, 808, 915, 1709, 1761
AsuC2I	CCSGG	1 cut(s)	674
AsuHPI	GGTGA	4 cut(s)	1537, 1544, 1835, 1841
AvaI	CYCGRG	1 cut(s)	1857
AvaII	GGWCC	2 cut(s)	362, 808
BaeGI	GKGCMC	2 cut(s)	293, 1086
BalI	TGGCCA	3 cut(s)	582, 1222, 1475
BamHI	GGATCC	1 cut(s)	148
BanI	GGYRCC	3 cut(s)	234, 1083, 1163
BanII	GRGCYC	2 cut(s)	293, 1350
BbsI	GAAGAC	2 cut(s)	1572, 1800
Bbv12I	GWGCWC	1 cut(s)	987
BbvI	GCAGC	3 cut(s)	725, 752, 1262
BccI	CCATC	5 cut(s)	863, 986, 1054, 1820, 1826
BciT130I	CCWGG	2 cut(s)	42, 1625
BcnI	CCSGG	1 cut(s)	674
BfaI	CTAG	5 cut(s)	620, 1227, 1370, 1374, 1469
BfmI	CTRYAG	3 cut(s)	521, 1144, 1188
BfrI	CTTAAG	1 cut(s)	482
BglI	GCCNNNNNGGC	1 cut(s)	1228
BglII	AGATCT	1 cut(s)	337
BisI	GCNGC	3 cut(s)	714, 741, 1251
BlsI	GCNGC	3 cut(s)	715, 742, 1252
Bme1390I	CCNGG	3 cut(s)	42, 674, 1625
Bme18I	GGWCC	2 cut(s)	362, 808
BmeRI	GACNNNNNGTC	1 cut(s)	1139
BmeT110I	CYCGRG	1 cut(s)	1857
BmgT120I	GGNCC	7 cut(s)	289, 290, 362, 808, 915, 1709, 1761
BmiI	GGNNCC	9 cut(s)	150, 236, 291, 810, 1085, 1098, 1165, 1271, 1710
BmrFI	CCNGG	3 cut(s)	42, 674, 1625
BmsI	GCATC	7 cut(s)	146, 522, 1183, 1324, 1332, 1618, 1797
BpiI	GAAGAC	2 cut(s)	1572, 1800
BpmI	CTGGAG	1 cut(s)	1607
Bpu10I	CCTNAGC	1 cut(s)	1719
BpuEI	CTTGAG	2 cut(s)	269, 1538
BpuMI	CCSGG	1 cut(s)	674
BsaJI	CCNNGG	2 cut(s)	299, 673
BsaWI	WCCGGW	2 cut(s)	1302, 1529
BsaXI	ACNNNNNCTCC	2 cut(s)	1298, 1328
Bsc4I	CCNNNNNNNGG	3 cut(s)	596, 1093, 1106
Bse118I	RCCGGY	1 cut(s)	1529
Bse1I	ACTGG	5 cut(s)	499, 967, 1223, 1335, 1678
BseBI	CCWGG	2 cut(s)	42, 1625
BseDI	CCNNGG	2 cut(s)	299, 673
BseGI	GGATG	4 cut(s)	513, 1183, 1339, 1633
BseLI	CCNNNNNNNGG	3 cut(s)	596, 1093, 1106
BseMII	CTCAG	6 cut(s)	370, 447, 890, 1029, 1047, 1443
BseNI	ACTGG	5 cut(s)	499, 967, 1223, 1335, 1678
BseRI	GAGGAG	1 cut(s)	1682
BseSI	GKGCMC	2 cut(s)	293, 1086
BseXI	GCAGC	3 cut(s)	725, 752, 1262
BsgI	GTGCAG	1 cut(s)	630
BshFI	GGCC	8 cut(s)	291, 582, 917, 1222, 1475, 1711, 1729, 1763
BshNI	GGYRCC	3 cut(s)	234, 1083, 1163
BshTI	ACCGGT	1 cut(s)	1529
BsiHKAI	GWGCWC	1 cut(s)	987
BsiHKCI	CYCGRG	1 cut(s)	1857
BsiSI	CCGG	3 cut(s)	673, 1303, 1530
BslFI	GGGAC	3 cut(s)	294, 572, 964
BslI	CCNNNNNNNGG	3 cut(s)	596, 1093, 1106
BsmFI	GGGAC	3 cut(s)	294, 572, 964
BsnI	GGCC	8 cut(s)	291, 582, 917, 1222, 1475, 1711, 1729, 1763
BsoBI	CYCGRG	1 cut(s)	1857
Bsp120I	GGGCCC	1 cut(s)	289
Bsp1286I	GDGCHC	4 cut(s)	293, 987, 1086, 1350
Bsp1407I	TGTACA	1 cut(s)	972
Bsp143I	GATC	8 cut(s)	37, 148, 337, 412, 664, 904, 1174, 1432
BspANI	GGCC	8 cut(s)	291, 582, 917, 1222, 1475, 1711, 1729, 1763
BspCNI	CTCAG	6 cut(s)	369, 446, 891, 1030, 1048, 1444
BspHI	TCATGA	3 cut(s)	241, 909, 1380
BspLI	GGNNCC	9 cut(s)	150, 236, 291, 810, 1085, 1098, 1165, 1271, 1710
BspMAI	CTGCAG	1 cut(s)	1192
BspPI	GGATC	4 cut(s)	32, 143, 156, 1440
BspT107I	GGYRCC	3 cut(s)	234, 1083, 1163
BspTI	CTTAAG	1 cut(s)	482
BsrFI	RCCGGY	1 cut(s)	1529
BsrGI	TGTACA	1 cut(s)	972
BsrI	ACTGG	5 cut(s)	499, 967, 1223, 1335, 1678
BssAI	RCCGGY	1 cut(s)	1529
BssECI	CCNNGG	2 cut(s)	299, 673
BssMI	GATC	8 cut(s)	37, 148, 337, 412, 664, 904, 1174, 1432
BssNAI	GTATAC	1 cut(s)	1458
Bst1107I	GTATAC	1 cut(s)	1458
Bst2UI	CCWGG	2 cut(s)	42, 1625
Bst4CI	ACNGT	7 cut(s)	509, 698, 926, 1088, 1499, 1510, 1703
Bst6I	CTCTTC	2 cut(s)	372, 798
BstAFI	CTTAAG	1 cut(s)	482
BstAPI	GCANNNNNTGC	2 cut(s)	638, 737
BstAUI	TGTACA	1 cut(s)	972
BstC8I	GCNNGC	2 cut(s)	919, 1696
BstEII	GGTNACC	1 cut(s)	1525
BstENI	CCTNNNNNAGG	1 cut(s)	1104
BstF5I	GGATG	4 cut(s)	513, 1183, 1339, 1633
BstHHI	GCGC	1 cut(s)	1633
BstKTI	GATC	8 cut(s)	40, 151, 340, 415, 667, 907, 1177, 1435
BstMBI	GATC	8 cut(s)	37, 148, 337, 412, 664, 904, 1174, 1432
BstMWI	GCNNNNNNNGC	6 cut(s)	532, 638, 737, 1202, 1228, 1320
BstNI	CCWGG	2 cut(s)	42, 1625
BstNSI	RCATGY	2 cut(s)	1156, 1804
BstPI	GGTNACC	1 cut(s)	1525
BstSCI	CCNGG	3 cut(s)	40, 672, 1623
BstSFI	CTRYAG	3 cut(s)	521, 1144, 1188
BstSLI	GKGCMC	2 cut(s)	293, 1086
BstV1I	GCAGC	3 cut(s)	725, 752, 1262
BstV2I	GAAGAC	2 cut(s)	1572, 1800
BstX2I	RGATCY	4 cut(s)	37, 148, 337, 1432
BstYI	RGATCY	4 cut(s)	37, 148, 337, 1432
BstZ17I	GTATAC	1 cut(s)	1458
BsuRI	GGCC	8 cut(s)	291, 582, 917, 1222, 1475, 1711, 1729, 1763
BtgZI	GCGATG	1 cut(s)	123
BtsCI	GGATG	4 cut(s)	513, 1183, 1339, 1633
BtsI	GCAGTG	1 cut(s)	987
BtsIMutI	CAGTG	3 cut(s)	364, 703, 987
Cac8I	GCNNGC	2 cut(s)	919, 1696
CaiI	CAGNNNCTG	2 cut(s)	930, 1196
CciI	TCATGA	3 cut(s)	241, 909, 1380
CfoI	GCGC	1 cut(s)	1633
Cfr10I	RCCGGY	1 cut(s)	1529
Cfr13I	GGNCC	7 cut(s)	289, 290, 362, 808, 915, 1709, 1761
Csp6I	GTAC	6 cut(s)	973, 1150, 1164, 1407, 1511, 1747
CspAI	ACCGGT	1 cut(s)	1529
CspCI	CAANNNNNGTGG	2 cut(s)	340, 375
CviAII	CATG	8 cut(s)	174, 242, 868, 910, 1153, 1266, 1381, 1801
CviQI	GTAC	6 cut(s)	973, 1150, 1164, 1407, 1511, 1747
DpnI	GATC	8 cut(s)	39, 150, 339, 414, 666, 906, 1176, 1434
DpnII	GATC	8 cut(s)	37, 148, 337, 412, 664, 904, 1174, 1432
DraI	TTTAAA	1 cut(s)	258
DriI	GACNNNNNGTC	1 cut(s)	1139
EaeI	YGGCCR	3 cut(s)	580, 1220, 1473
Eam1104I	CTCTTC	2 cut(s)	372, 798
Eam1105I	GACNNNNNGTC	1 cut(s)	1139
EarI	CTCTTC	2 cut(s)	372, 798
Eco147I	AGGCCT	1 cut(s)	1729
Eco24I	GRGCYC	2 cut(s)	293, 1350
Eco47I	GGWCC	2 cut(s)	362, 808
Eco57I	CTGAAG	5 cut(s)	128, 393, 834, 1218, 1584
Eco88I	CYCGRG	1 cut(s)	1857
Eco91I	GGTNACC	1 cut(s)	1525
EcoNI	CCTNNNNNAGG	1 cut(s)	1104
EcoO109I	RGGNCCY	3 cut(s)	289, 808, 1709
EcoO65I	GGTNACC	1 cut(s)	1525
EcoRII	CCWGG	2 cut(s)	40, 1623
EcoT22I	ATGCAT	1 cut(s)	1325
EcoT38I	GRGCYC	2 cut(s)	293, 1350
FaeI	CATG	8 cut(s)	177, 245, 871, 913, 1156, 1269, 1384, 1804
FalI	AAGNNNNNCTT	2 cut(s)	126, 158
FaqI	GGGAC	3 cut(s)	294, 572, 964
FatI	CATG	8 cut(s)	173, 241, 867, 909, 1152, 1265, 1380, 1800
FblI	GTMKAC	1 cut(s)	1457
Fnu4HI	GCNGC	3 cut(s)	714, 741, 1251
FokI	GGATG	4 cut(s)	500, 1170, 1346, 1640
FriOI	GRGCYC	2 cut(s)	293, 1350
Fsp4HI	GCNGC	3 cut(s)	714, 741, 1251
FspBI	CTAG	5 cut(s)	620, 1227, 1370, 1374, 1469
GlaI	GCGC	1 cut(s)	1632
GluI	GCNGC	3 cut(s)	714, 741, 1251
GsuI	CTGGAG	1 cut(s)	1607
HaeIII	GGCC	8 cut(s)	291, 582, 917, 1222, 1475, 1711, 1729, 1763
HapII	CCGG	3 cut(s)	673, 1303, 1530
HhaI	GCGC	1 cut(s)	1633
Hin1II	CATG	8 cut(s)	177, 245, 871, 913, 1156, 1269, 1384, 1804
Hin6I	GCGC	1 cut(s)	1631
HinP1I	GCGC	1 cut(s)	1631
HindIII	AAGCTT	3 cut(s)	266, 322, 485
HinfI	GANTC	5 cut(s)	222, 282, 451, 1025, 1384
HpaII	CCGG	3 cut(s)	673, 1303, 1530
HphI	GGTGA	4 cut(s)	1537, 1544, 1835, 1841
Hpy166II	GTNNAC	4 cut(s)	362, 1458, 1495, 1747
Hpy188I	TCNGA	7 cut(s)	274, 303, 1039, 1057, 1360, 1439, 1505
Hpy8I	GTNNAC	4 cut(s)	362, 1458, 1495, 1747
HpyAV	CCTTC	5 cut(s)	191, 793, 809, 1193, 1648
HpyCH4III	ACNGT	7 cut(s)	509, 698, 926, 1088, 1499, 1510, 1703
HpyCH4IV	ACGT	2 cut(s)	734, 1409
HpyF10VI	GCNNNNNNNGC	6 cut(s)	532, 638, 737, 1202, 1228, 1320
HpySE526I	ACGT	2 cut(s)	734, 1409
Hsp92II	CATG	8 cut(s)	177, 245, 871, 913, 1156, 1269, 1384, 1804
HspAI	GCGC	1 cut(s)	1631
KpnI	GGTACC	1 cut(s)	1167
Kzo9I	GATC	8 cut(s)	37, 148, 337, 412, 664, 904, 1174, 1432
LmnI	GCTCC	4 cut(s)	1275, 1319, 1453, 1669
Lsp1109I	GCAGC	3 cut(s)	725, 752, 1262
LweI	GCATC	7 cut(s)	146, 522, 1183, 1324, 1332, 1618, 1797
MaeI	CTAG	5 cut(s)	620, 1227, 1370, 1374, 1469
MaeII	ACGT	2 cut(s)	734, 1409
MaeIII	GTNAC	5 cut(s)	209, 599, 613, 626, 1525
MalI	GATC	8 cut(s)	39, 150, 339, 414, 666, 906, 1176, 1434
MboI	GATC	8 cut(s)	37, 148, 337, 412, 664, 904, 1174, 1432
MboII	GAAGA	8 cut(s)	359, 386, 808, 815, 853, 969, 1577, 1805
MfeI	CAATTG	2 cut(s)	460, 1389
MflI	RGATCY	4 cut(s)	37, 148, 337, 1432
MhlI	GDGCHC	4 cut(s)	293, 987, 1086, 1350
MlsI	TGGCCA	3 cut(s)	582, 1222, 1475
MluNI	TGGCCA	3 cut(s)	582, 1222, 1475
MlyI	GAGTC	1 cut(s)	276
Mox20I	TGGCCA	3 cut(s)	582, 1222, 1475
Mph1103I	ATGCAT	1 cut(s)	1325
MroXI	GAANNNNTTC	1 cut(s)	391
MscI	TGGCCA	3 cut(s)	582, 1222, 1475
MseI	TTAA	7 cut(s)	164, 257, 326, 483, 546, 681, 1686
MslI	CAYNNNNRTG	2 cut(s)	240, 1805
Msp20I	TGGCCA	3 cut(s)	582, 1222, 1475
MspA1I	CMGCKG	3 cut(s)	574, 716, 1603
MspCI	CTTAAG	1 cut(s)	482
MspI	CCGG	3 cut(s)	673, 1303, 1530
MspR9I	CCNGG	3 cut(s)	42, 674, 1625
MunI	CAATTG	2 cut(s)	460, 1389
MvaI	CCWGG	2 cut(s)	42, 1625
MwoI	GCNNNNNNNGC	6 cut(s)	532, 638, 737, 1202, 1228, 1320
NciI	CCSGG	1 cut(s)	674
NdeII	GATC	8 cut(s)	37, 148, 337, 412, 664, 904, 1174, 1432
NlaIII	CATG	8 cut(s)	177, 245, 871, 913, 1156, 1269, 1384, 1804
NlaIV	GGNNCC	9 cut(s)	150, 236, 291, 810, 1085, 1098, 1165, 1271, 1710
NmuCI	GTSAC	1 cut(s)	1525
NsiI	ATGCAT	1 cut(s)	1325
NspI	RCATGY	2 cut(s)	1156, 1804
PaeR7I	CTCGAG	1 cut(s)	1857
PagI	TCATGA	3 cut(s)	241, 909, 1380
PceI	AGGCCT	1 cut(s)	1729
PdmI	GAANNNNTTC	1 cut(s)	391
PfeI	GAWTC	4 cut(s)	222, 451, 1025, 1384
PflMI	CCANNNNNTGG	1 cut(s)	596
PfoI	TCCNGGA	1 cut(s)	1623
PinAI	ACCGGT	1 cut(s)	1529
PkrI	GCNGC	3 cut(s)	715, 742, 1252
PleI	GAGTC	1 cut(s)	276
PpsI	GAGTC	1 cut(s)	276
PpuMI	RGGWCCY	1 cut(s)	808
Psp1406I	AACGTT	1 cut(s)	734
Psp5II	RGGWCCY	1 cut(s)	808
Psp6I	CCWGG	2 cut(s)	40, 1623
PspEI	GGTNACC	1 cut(s)	1525
PspGI	CCWGG	2 cut(s)	40, 1623
PspN4I	GGNNCC	9 cut(s)	150, 236, 291, 810, 1085, 1098, 1165, 1271, 1710
PspOMI	GGGCCC	1 cut(s)	289
PspPI	GGNCC	7 cut(s)	289, 290, 362, 808, 915, 1709, 1761
PspPPI	RGGWCCY	1 cut(s)	808
PstI	CTGCAG	1 cut(s)	1192
PstNI	CAGNNNCTG	2 cut(s)	930, 1196
PsuI	RGATCY	4 cut(s)	37, 148, 337, 1432
PvuII	CAGCTG	3 cut(s)	574, 716, 1603
RsaI	GTAC	6 cut(s)	974, 1151, 1165, 1408, 1512, 1748
RsaNI	GTAC	6 cut(s)	973, 1150, 1164, 1407, 1511, 1747
RseI	CAYNNNNRTG	2 cut(s)	240, 1805
SaqAI	TTAA	7 cut(s)	164, 257, 326, 483, 546, 681, 1686
SatI	GCNGC	3 cut(s)	714, 741, 1251
Sau3AI	GATC	8 cut(s)	37, 148, 337, 412, 664, 904, 1174, 1432
Sau96I	GGNCC	7 cut(s)	289, 290, 362, 808, 915, 1709, 1761
SchI	GAGTC	1 cut(s)	276
ScrFI	CCNGG	3 cut(s)	42, 674, 1625
SduI	GDGCHC	4 cut(s)	293, 987, 1086, 1350
SfaNI	GCATC	7 cut(s)	146, 522, 1183, 1324, 1332, 1618, 1797
SfcI	CTRYAG	3 cut(s)	521, 1144, 1188
Sfr274I	CTCGAG	1 cut(s)	1857
SinI	GGWCC	2 cut(s)	362, 808
SlaI	CTCGAG	1 cut(s)	1857
SmiMI	CAYNNNNRTG	2 cut(s)	240, 1805
SmlI	CTYRAG	4 cut(s)	284, 482, 1517, 1857
SmoI	CTYRAG	4 cut(s)	284, 482, 1517, 1857
SseBI	AGGCCT	1 cut(s)	1729
SspMI	CTAG	5 cut(s)	620, 1227, 1370, 1374, 1469
StuI	AGGCCT	1 cut(s)	1729
StyD4I	CCNGG	3 cut(s)	40, 672, 1623
TaaI	ACNGT	7 cut(s)	509, 698, 926, 1088, 1499, 1510, 1703
TaiI	ACGT	2 cut(s)	737, 1412
TaqI	TCGA	9 cut(s)	11, 225, 344, 881, 987, 1291, 1635, 1791, 1858
TaqII	GACCGA	1 cut(s)	209
TatI	WGTACW	2 cut(s)	972, 1510
TfiI	GAWTC	4 cut(s)	222, 451, 1025, 1384
Tru1I	TTAA	7 cut(s)	164, 257, 326, 483, 546, 681, 1686
Tru9I	TTAA	7 cut(s)	164, 257, 326, 483, 546, 681, 1686
TscAI	CASTG	3 cut(s)	364, 703, 987
TseFI	GTSAC	1 cut(s)	1525
TseI	GCWGC	3 cut(s)	713, 740, 1250
Tsp45I	GTSAC	1 cut(s)	1525
TspDTI	ATGAA	6 cut(s)	193, 258, 388, 408, 908, 1397
TspRI	CASTG	3 cut(s)	364, 703, 987
Van91I	CCANNNNNTGG	1 cut(s)	596
Vha464I	CTTAAG	1 cut(s)	482
VpaK11BI	GGWCC	2 cut(s)	362, 808
XagI	CCTNNNNNAGG	1 cut(s)	1104
XapI	RAATTY	3 cut(s)	1046, 1361, 1579
XceI	RCATGY	2 cut(s)	1156, 1804
XhoI	CTCGAG	1 cut(s)	1857
XmiI	GTMKAC	1 cut(s)	1457
XmnI	GAANNNNTTC	1 cut(s)	391
XspI	CTAG	5 cut(s)	620, 1227, 1370, 1374, 1469
Zsp2I	ATGCAT	1 cut(s)	1325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.