Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0004418

Physical Location & Seq

Genomic Coordinates Forward (+)

6834365 .. 6836229

Gene Structure 1865 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G004230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGTCTTTCTTAATGCGTTTGTTGAATGGGCGAGATCTTGGCATTTTTGTGCTCTTGTTATTGCTTAGTTGTAGGTTCAGCCATGGTGTTGAGAGTGATATAAACTGCTTGAGAAGTATACAAGCAACATTGGAGGACCCTTTAAACATGTTAACCTCTTCATGGGATTTTAACAATGCCACCGAAGGATTCATCTGTAACTTCCTGGGAATCGAGTGTTGGCACCCTGATGAGAGCAAAGTTTTAAACATCAAGCTTGCGGATTTGGGACTCAAAGGCCACTTTCCTCCTGGTGTAGCGAATTGTACAAGCTTAACAGGCTTGGATCTTTCGAGCAACAACCTCAGTGGAGCAATTCCTGATGATATTGGTCTTTTAATCCCTTTCATTACGTCGCTTGAGCTCTCGTCCAACAACTTCTCAGGGCCAATTCCCAGGAATGTCTCCAATTGTACTTATCTGAATGTCCTTAAGCTTGACAACAACAAGTTCACGGGTCAGATTCCTGCAGAACTTGGTCAGCTCAGTAGGCTTAAAACCTTTAGCGTGGCCAACAATCAACTGTCTGGGCTAGTCCCCACCTTCAACGTTAAGGATAGTACAATCGGAGCGGACAGCTATGCAAACAATCCTGGACTTTGTGGCGGTCCTTTGGAAGGTTGCCAGGCAGCTGCAAAGAAGTCCAACAGTGTAGTTATCGTGGCAGCAGGTGTTGGGGGTGCAACTTTTGCAGCATTAGTTGTGATTATTGGTTTGTTCTTCTTCATGCGTAGAGTGTCTGCAAGGAAGAAGGAGGAGGACCCTGAAGGCAACAAATGGGCAAGGAGTTTGAAGGGAACTAAAGGAATCAAGCAAAGACAATATCATCGGCTCAGGAAGAACTGGAACCGTTACAAGGCAGTGCTTGATGATGGCACCTCACTTATGGTCAAGAGGCTGCAGGAATCTCAATACTCTGAGAAAGAGTTTCTGTCTGAGATGTCTACTCTGGGTGGTGTAGAACACCGTAACTTGGTTCCCCTTTTGGGATATTGTGTGGCAAAGAAGGAAAGGCTTTTGGTGTATAAGTACATGCCTCATGGTACCCTCCATGACCAGCTACATCCTGTGGAAGCTGATGGTGCCAAGATTATGGACTGGCCTACAAGGCTAAAAATTGGGATAGGAGCAGCCAGAGGATTAGCGTGGCTCCATCATAACTGTAATCCTCGAATTATCCACCGAAACATAAGCTCCAAATGCATCTTACTGGATGCAGATTTTGAGCCGAAGATTTCTGATTTTGGCCTAGCTAGGCTCATGAATCCAATTGATACACATTTGAGTACTTTTGTGAATGGGGAGTTCGGAGATCTGGGTTATGTGGCTCCCGAGTATACAAGAACTTTAGTAGCCACTCCCAAGGGGGATGTTTACAGCTTTGGAACTGTTCTTCTTGAGTTGGTTACTGGTGAAAGAGCTACCCATATTTCTAAAGCTCCAGAAGATTTCAAAGGAAACTTGGTGGAATGGATCTTGCAGCTGTCAAGCAAATCTCAACTCACAGATGCGATTGACAAATCCTTGATTGGAAAGGGTGTGGATGAGGAGGTTTTCCAGTTCCTTAAAGTTGCATGCAACTGTGTGGTGCCTACTTCCAAGGAGAGGCCTACTATGTTTGAAGTGTTCCAGCTTCTACGAGCCATCGGACAGAAATATAACTTCACAATTGAAGAGGAGATGTCGACGCCTTCAGACACTGCTGATTGTGCAGGAGAACTCATTGTTGCTCGAGAGATGATGGAGATTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0031348 GO:0033612 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0060548 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

597

Amino Acids

65.86

Weight (kDa)

6.52

Isoelectric Point (pI)

31.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	303 - 557	7.1e-29	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	304 - 554	1.1e-32	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004418)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48380
fragaria_vesca	FvH4_2g17440 FvH4_2g17440 FvH4_2g17440
malus_domestica	MD05G1153300.v1.1
prunus_persica	Prupe.8G186700_v2.0.a1
pyrus_communis	pycom05g14770 pycom10g12770
rosa_chinensis	RchiOBHm_Chr6g0248541 RchiOBHm_Chr6g0282151
rosa_laevigata	RLG00000012905 RLG00000015144
rosa_multiflora	Rmu_sc0002553.1_g000025 Rmu_sc0002553.1_g000026 Rmu_sc0011940.1_g000001 Rmu_sc0021471.1_g000006
rosa_roxburghii	Rroxscaffold_7G00186440 Rroxscaffold_7G00213230
rosa_rugosa	Rorug05G0532000 Rorug06G0145800
rosa_samantha	Rh6AG048900 Rh6AG258800 Rh6BG044100 Rh6BG044400 Rh6BG262100 Rh6CG041000 Rh6CG261100 Rh6DG037200 Rh6DG253100
rosa_wichuraiana	Rw6G004150 Rw6G004230 Rw6G022400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	698
Acc36I	ACCTGC	1 cut(s)	698
Acc65I	GGTACC	1 cut(s)	1082
AccB1I	GGYRCC	5 cut(s)	222, 914, 1082, 1121, 1627
AccBSI	CCGCTC	1 cut(s)	611
AccI	GTMKAC	4 cut(s)	118, 983, 1376, 1724
AciI	CCGC	3 cut(s)	260, 611, 645
AclI	AACGTT	1 cut(s)	588
AclWI	GGATC	2 cut(s)	333, 1520
AcoI	YGGCCR	1 cut(s)	549
AcuI	CTGAAG	2 cut(s)	825, 1716
AcyI	GRCGYC	1 cut(s)	1727
AfaI	GTAC	6 cut(s)	307, 454, 601, 1070, 1084, 1327
AfiI	CCNNNNNNNGG	6 cut(s)	162, 656, 895, 1012, 1025, 1644
AflII	CTTAAG	1 cut(s)	470
AflIII	ACRYGT	1 cut(s)	147
AgsI	TTSAA	6 cut(s)	25, 586, 832, 1492, 1661, 1712
AjnI	CCWGG	5 cut(s)	204, 289, 434, 631, 663
AjuI	GAANNNNNNNTTGG	2 cut(s)	202, 234
Alw21I	GWGCWC	2 cut(s)	54, 405
Alw26I	GTCTC	1 cut(s)	448
AlwI	GGATC	2 cut(s)	333, 1520
AlwNI	CAGNNNCTG	1 cut(s)	1739
Ama87I	CYCGRG	2 cut(s)	1370, 1770
AoxI	GGCC	6 cut(s)	277, 425, 549, 1139, 1285, 1646
ApeKI	GCWGC	7 cut(s)	668, 671, 704, 731, 937, 1169, 1519
AseI	ATTAAT	1 cut(s)	1788
Asp718I	GGTACC	1 cut(s)	1082
AspS9I	GGNCC	4 cut(s)	136, 425, 647, 799
AsuHPI	GGTGA	1 cut(s)	1463
AvaI	CYCGRG	2 cut(s)	1370, 1770
AvaII	GGWCC	3 cut(s)	136, 647, 799
BalI	TGGCCA	1 cut(s)	551
BanI	GGYRCC	5 cut(s)	222, 914, 1082, 1121, 1627
BanII	GRGCYC	1 cut(s)	405
Bbv12I	GWGCWC	2 cut(s)	54, 405
BbvI	GCAGC	7 cut(s)	658, 680, 716, 743, 924, 1181, 1531
BccI	CCATC	5 cut(s)	905, 1112, 1200, 1691, 1774
BciT130I	CCWGG	5 cut(s)	206, 291, 436, 633, 665
BcoDI	GTCTC	1 cut(s)	448
BfaI	CTAG	3 cut(s)	572, 1289, 1293
BfmI	CTRYAG	2 cut(s)	507, 938
BfrI	CTTAAG	1 cut(s)	470
BfuAI	ACCTGC	1 cut(s)	698
BglI	GCCNNNNNGGC	1 cut(s)	1147
BglII	AGATCT	2 cut(s)	34, 1351
BisI	GCNGC	7 cut(s)	669, 672, 705, 732, 938, 1170, 1520
BlsI	GCNGC	7 cut(s)	670, 673, 706, 733, 939, 1171, 1521
BmcAI	AGTACT	1 cut(s)	1327
Bme1390I	CCNGG	5 cut(s)	206, 291, 436, 633, 665
Bme18I	GGWCC	3 cut(s)	136, 647, 799
BmeT110I	CYCGRG	2 cut(s)	1370, 1770
BmgT120I	GGNCC	4 cut(s)	136, 425, 647, 799
BmrFI	CCNGG	5 cut(s)	206, 291, 436, 633, 665
BmsI	GCATC	3 cut(s)	1243, 1251, 1537
BpmI	CTGGAG	1 cut(s)	1464
Bpu10I	CCTNAGC	1 cut(s)	872
BpuEI	CTTGAG	3 cut(s)	130, 419, 1457
BsaHI	GRCGYC	1 cut(s)	1727
BsaJI	CCNNGG	5 cut(s)	82, 205, 434, 1401, 1638
BsaXI	ACNNNNNCTCC	2 cut(s)	1217, 1247
Bsc4I	CCNNNNNNNGG	6 cut(s)	162, 656, 895, 1012, 1025, 1644
Bse1I	ACTGG	5 cut(s)	887, 1142, 1254, 1453, 1597
BseBI	CCWGG	5 cut(s)	206, 291, 436, 633, 665
BseDI	CCNNGG	5 cut(s)	82, 205, 434, 1401, 1638
BseGI	GGATG	4 cut(s)	1102, 1258, 1414, 1588
BseLI	CCNNNNNNNGG	6 cut(s)	162, 656, 895, 1012, 1025, 1644
BseMII	CTCAG	6 cut(s)	358, 435, 538, 886, 948, 966
BseNI	ACTGG	5 cut(s)	887, 1142, 1254, 1453, 1597
BseRI	GAGGAG	3 cut(s)	809, 1601, 1730
BseXI	GCAGC	7 cut(s)	658, 680, 716, 743, 924, 1181, 1531
BsgI	GTGCAG	1 cut(s)	1770
BshFI	GGCC	6 cut(s)	279, 427, 551, 1141, 1287, 1648
BshNI	GGYRCC	5 cut(s)	222, 914, 1082, 1121, 1627
BsiHKAI	GWGCWC	2 cut(s)	54, 405
BsiHKCI	CYCGRG	2 cut(s)	1370, 1770
BslFI	GGGAC	2 cut(s)	282, 560
BslI	CCNNNNNNNGG	6 cut(s)	162, 656, 895, 1012, 1025, 1644
BsmAI	GTCTC	1 cut(s)	448
BsmFI	GGGAC	2 cut(s)	282, 560
BsnI	GGCC	6 cut(s)	279, 427, 551, 1141, 1287, 1648
BsoBI	CYCGRG	2 cut(s)	1370, 1770
Bsp1286I	GDGCHC	2 cut(s)	54, 405
Bsp1407I	TGTACA	1 cut(s)	305
Bsp143I	GATC	4 cut(s)	34, 325, 1351, 1512
Bsp19I	CCATGG	1 cut(s)	82
BspACI	CCGC	3 cut(s)	260, 611, 645
BspANI	GGCC	6 cut(s)	279, 427, 551, 1141, 1287, 1648
BspCNI	CTCAG	6 cut(s)	357, 434, 537, 885, 949, 967
BspHI	TCATGA	1 cut(s)	1299
BspMAI	CTGCAG	2 cut(s)	511, 942
BspMI	ACCTGC	1 cut(s)	698
BspPI	GGATC	2 cut(s)	333, 1520
BspT107I	GGYRCC	5 cut(s)	222, 914, 1082, 1121, 1627
BspTI	CTTAAG	1 cut(s)	470
BsrBI	CCGCTC	1 cut(s)	611
BsrGI	TGTACA	1 cut(s)	305
BsrI	ACTGG	5 cut(s)	887, 1142, 1254, 1453, 1597
BssECI	CCNNGG	5 cut(s)	82, 205, 434, 1401, 1638
BssMI	GATC	4 cut(s)	34, 325, 1351, 1512
BssNAI	GTATAC	2 cut(s)	119, 1377
BssNI	GRCGYC	1 cut(s)	1727
BssT1I	CCWWGG	3 cut(s)	82, 1401, 1638
Bst1107I	GTATAC	2 cut(s)	119, 1377
Bst2UI	CCWGG	5 cut(s)	206, 291, 436, 633, 665
Bst4CI	ACNGT	7 cut(s)	564, 689, 890, 1007, 1202, 1429, 1622
Bst6I	CTCTTC	2 cut(s)	163, 1707
BstACI	GRCGYC	1 cut(s)	1727
BstAFI	CTTAAG	1 cut(s)	470
BstAPI	GCANNNNNTGC	1 cut(s)	728
BstAUI	TGTACA	1 cut(s)	305
BstC8I	GCNNGC	2 cut(s)	258, 1615
BstDEI	CTNAG	7 cut(s)	65, 344, 421, 524, 872, 957, 975
BstDSI	CCRYGG	1 cut(s)	82
BstENI	CCTNNNNNAGG	1 cut(s)	654
BstF5I	GGATG	4 cut(s)	1102, 1258, 1414, 1588
BstKTI	GATC	4 cut(s)	37, 328, 1354, 1515
BstMAI	GTCTC	1 cut(s)	448
BstMBI	GATC	4 cut(s)	34, 325, 1351, 1512
BstMWI	GCNNNNNNNGC	7 cut(s)	318, 529, 728, 1121, 1147, 1239, 1748
BstNI	CCWGG	5 cut(s)	206, 291, 436, 633, 665
BstNSI	RCATGY	3 cut(s)	151, 1075, 1617
BstSCI	CCNGG	5 cut(s)	204, 289, 434, 631, 663
BstSFI	CTRYAG	2 cut(s)	507, 938
BstV1I	GCAGC	7 cut(s)	658, 680, 716, 743, 924, 1181, 1531
BstX2I	RGATCY	4 cut(s)	34, 325, 1351, 1512
BstXI	CCANNNNNNTGG	1 cut(s)	1132
BstYI	RGATCY	4 cut(s)	34, 325, 1351, 1512
BstZ17I	GTATAC	2 cut(s)	119, 1377
BsuRI	GGCC	6 cut(s)	279, 427, 551, 1141, 1287, 1648
BtgI	CCRYGG	1 cut(s)	82
BtsCI	GGATG	4 cut(s)	1102, 1258, 1414, 1588
BtsI	GCAGTG	2 cut(s)	906, 1737
BtsIMutI	CAGTG	4 cut(s)	352, 694, 906, 1737
BveI	ACCTGC	1 cut(s)	698
Cac8I	GCNNGC	2 cut(s)	258, 1615
CaiI	CAGNNNCTG	1 cut(s)	1739
CciI	TCATGA	1 cut(s)	1299
Cfr13I	GGNCC	4 cut(s)	136, 425, 647, 799
CseI	GACGC	1 cut(s)	1735
Csp6I	GTAC	6 cut(s)	306, 453, 600, 1069, 1083, 1326
CspCI	CAANNNNNGTGG	2 cut(s)	328, 363
CviAII	CATG	9 cut(s)	83, 148, 162, 766, 1072, 1079, 1091, 1300, 1614
CviQI	GTAC	6 cut(s)	306, 453, 600, 1069, 1083, 1326
DdeI	CTNAG	7 cut(s)	65, 344, 421, 524, 872, 957, 975
DpnI	GATC	4 cut(s)	36, 327, 1353, 1514
DpnII	GATC	4 cut(s)	34, 325, 1351, 1512
DraI	TTTAAA	2 cut(s)	144, 246
EaeI	YGGCCR	1 cut(s)	549
Eam1104I	CTCTTC	2 cut(s)	163, 1707
EarI	CTCTTC	2 cut(s)	163, 1707
Ecl136II	GAGCTC	1 cut(s)	403
Eco130I	CCWWGG	3 cut(s)	82, 1401, 1638
Eco147I	AGGCCT	1 cut(s)	1648
Eco24I	GRGCYC	1 cut(s)	405
Eco47I	GGWCC	3 cut(s)	136, 647, 799
Eco53kI	GAGCTC	1 cut(s)	403
Eco57I	CTGAAG	2 cut(s)	825, 1716
Eco88I	CYCGRG	2 cut(s)	1370, 1770
EcoICRI	GAGCTC	1 cut(s)	403
EcoNI	CCTNNNNNAGG	1 cut(s)	654
EcoO109I	RGGNCCY	2 cut(s)	136, 799
EcoRII	CCWGG	5 cut(s)	204, 289, 434, 631, 663
EcoT14I	CCWWGG	3 cut(s)	82, 1401, 1638
EcoT22I	ATGCAT	1 cut(s)	1244
EcoT38I	GRGCYC	1 cut(s)	405
ErhI	CCWWGG	3 cut(s)	82, 1401, 1638
FaeI	CATG	9 cut(s)	86, 151, 165, 769, 1075, 1082, 1094, 1303, 1617
FaqI	GGGAC	2 cut(s)	282, 560
FatI	CATG	9 cut(s)	82, 147, 161, 765, 1071, 1078, 1090, 1299, 1613
FblI	GTMKAC	4 cut(s)	118, 983, 1376, 1724
Fnu4HI	GCNGC	7 cut(s)	669, 672, 705, 732, 938, 1170, 1520
FokI	GGATG	4 cut(s)	1089, 1265, 1421, 1595
FriOI	GRGCYC	1 cut(s)	405
Fsp4HI	GCNGC	7 cut(s)	669, 672, 705, 732, 938, 1170, 1520
FspBI	CTAG	3 cut(s)	572, 1289, 1293
GluI	GCNGC	7 cut(s)	669, 672, 705, 732, 938, 1170, 1520
GsuI	CTGGAG	1 cut(s)	1464
HaeIII	GGCC	6 cut(s)	279, 427, 551, 1141, 1287, 1648
HgaI	GACGC	1 cut(s)	1735
Hin1I	GRCGYC	1 cut(s)	1727
Hin1II	CATG	9 cut(s)	86, 151, 165, 769, 1075, 1082, 1094, 1303, 1617
HincII	GTYRAC	2 cut(s)	153, 1725
HindII	GTYRAC	2 cut(s)	153, 1725
HindIII	AAGCTT	3 cut(s)	254, 310, 473
HinfI	GANTC	7 cut(s)	189, 210, 270, 502, 846, 944, 1303
HpaI	GTTAAC	1 cut(s)	153
HphI	GGTGA	1 cut(s)	1463
Hpy166II	GTNNAC	7 cut(s)	119, 153, 492, 984, 1377, 1414, 1725
Hpy188I	TCNGA	9 cut(s)	462, 501, 608, 958, 976, 1279, 1349, 1688, 1735
Hpy188III	TCNNGA	8 cut(s)	359, 874, 931, 1300, 1370, 1436, 1481, 1772
Hpy8I	GTNNAC	7 cut(s)	119, 153, 492, 984, 1377, 1414, 1725
Hpy99I	CGWCG	2 cut(s)	397, 1729
HpyAV	CCTTC	8 cut(s)	179, 592, 650, 784, 800, 826, 1039, 1740
HpyCH4III	ACNGT	7 cut(s)	564, 689, 890, 1007, 1202, 1429, 1622
HpyCH4IV	ACGT	2 cut(s)	392, 588
HpyF10VI	GCNNNNNNNGC	7 cut(s)	318, 529, 728, 1121, 1147, 1239, 1748
HpyF3I	CTNAG	7 cut(s)	65, 344, 421, 524, 872, 957, 975
HpySE526I	ACGT	2 cut(s)	392, 588
Hsp92I	GRCGYC	1 cut(s)	1727
Hsp92II	CATG	9 cut(s)	86, 151, 165, 769, 1075, 1082, 1094, 1303, 1617
KpnI	GGTACC	1 cut(s)	1086
KspAI	GTTAAC	1 cut(s)	153
Kzo9I	GATC	4 cut(s)	34, 325, 1351, 1512
LmnI	GCTCC	7 cut(s)	350, 608, 1166, 1194, 1238, 1372, 1483
Lsp1109I	GCAGC	7 cut(s)	658, 680, 716, 743, 924, 1181, 1531
LweI	GCATC	3 cut(s)	1243, 1251, 1537
MaeI	CTAG	3 cut(s)	572, 1289, 1293
MaeII	ACGT	2 cut(s)	392, 588
MaeIII	GTNAC	4 cut(s)	197, 890, 1007, 1444
MalI	GATC	4 cut(s)	36, 327, 1353, 1514
MbiI	CCGCTC	1 cut(s)	611
MboI	GATC	4 cut(s)	34, 325, 1351, 1512
MboII	GAAGA	9 cut(s)	150, 751, 754, 799, 889, 1282, 1424, 1496, 1724
MfeI	CAATTG	3 cut(s)	448, 1308, 1707
MflI	RGATCY	4 cut(s)	34, 325, 1351, 1512
MhlI	GDGCHC	2 cut(s)	54, 405
MlsI	TGGCCA	1 cut(s)	551
MluCI	AATT	9 cut(s)	301, 354, 429, 448, 1155, 1212, 1308, 1707, 1789
MluNI	TGGCCA	1 cut(s)	551
MlyI	GAGTC	1 cut(s)	264
MmeI	TCCRAC	2 cut(s)	435, 708
Mox20I	TGGCCA	1 cut(s)	551
Mph1103I	ATGCAT	1 cut(s)	1244
MscI	TGGCCA	1 cut(s)	551
MslI	CAYNNNNRTG	2 cut(s)	47, 228
Msp20I	TGGCCA	1 cut(s)	551
MspA1I	CMGCKG	2 cut(s)	671, 1522
MspCI	CTTAAG	1 cut(s)	470
MspR9I	CCNGG	5 cut(s)	206, 291, 436, 633, 665
MunI	CAATTG	3 cut(s)	448, 1308, 1707
MvaI	CCWGG	5 cut(s)	206, 291, 436, 633, 665
MwoI	GCNNNNNNNGC	7 cut(s)	318, 529, 728, 1121, 1147, 1239, 1748
NcoI	CCATGG	1 cut(s)	82
NdeII	GATC	4 cut(s)	34, 325, 1351, 1512
NlaIII	CATG	9 cut(s)	86, 151, 165, 769, 1075, 1082, 1094, 1303, 1617
NsiI	ATGCAT	1 cut(s)	1244
NspI	RCATGY	3 cut(s)	151, 1075, 1617
PaeI	GCATGC	1 cut(s)	1617
PaeR7I	CTCGAG	1 cut(s)	1770
PagI	TCATGA	1 cut(s)	1299
PaqCI	CACCTGC	1 cut(s)	698
PceI	AGGCCT	1 cut(s)	1648
PciI	ACATGT	1 cut(s)	147
PfeI	GAWTC	6 cut(s)	189, 210, 502, 846, 944, 1303
PfoI	TCCNGGA	1 cut(s)	631
PkrI	GCNGC	7 cut(s)	670, 673, 706, 733, 939, 1171, 1521
PleI	GAGTC	1 cut(s)	264
PpsI	GAGTC	1 cut(s)	264
PpuMI	RGGWCCY	2 cut(s)	136, 799
PscI	ACATGT	1 cut(s)	147
PshBI	ATTAAT	1 cut(s)	1788
Psp124BI	GAGCTC	1 cut(s)	405
Psp1406I	AACGTT	1 cut(s)	588
Psp5II	RGGWCCY	2 cut(s)	136, 799
Psp6I	CCWGG	5 cut(s)	204, 289, 434, 631, 663
PspGI	CCWGG	5 cut(s)	204, 289, 434, 631, 663
PspPI	GGNCC	4 cut(s)	136, 425, 647, 799
PspPPI	RGGWCCY	2 cut(s)	136, 799
PstI	CTGCAG	2 cut(s)	511, 942
PstNI	CAGNNNCTG	1 cut(s)	1739
PsuI	RGATCY	4 cut(s)	34, 325, 1351, 1512
PvuII	CAGCTG	2 cut(s)	671, 1522
RsaI	GTAC	6 cut(s)	307, 454, 601, 1070, 1084, 1327
RsaNI	GTAC	6 cut(s)	306, 453, 600, 1069, 1083, 1326
RseI	CAYNNNNRTG	2 cut(s)	47, 228
SacI	GAGCTC	1 cut(s)	405
SalI	GTCGAC	1 cut(s)	1723
SatI	GCNGC	7 cut(s)	669, 672, 705, 732, 938, 1170, 1520
Sau3AI	GATC	4 cut(s)	34, 325, 1351, 1512
Sau96I	GGNCC	4 cut(s)	136, 425, 647, 799
ScaI	AGTACT	1 cut(s)	1327
SchI	GAGTC	1 cut(s)	264
ScrFI	CCNGG	5 cut(s)	206, 291, 436, 633, 665
SduI	GDGCHC	2 cut(s)	54, 405
SfaNI	GCATC	3 cut(s)	1243, 1251, 1537
SfcI	CTRYAG	2 cut(s)	507, 938
Sfr274I	CTCGAG	1 cut(s)	1770
SinI	GGWCC	3 cut(s)	136, 647, 799
SlaI	CTCGAG	1 cut(s)	1770
SmiMI	CAYNNNNRTG	2 cut(s)	47, 228
SmlI	CTYRAG	5 cut(s)	109, 398, 470, 1436, 1770
SmoI	CTYRAG	5 cut(s)	109, 398, 470, 1436, 1770
SphI	GCATGC	1 cut(s)	1617
Sse9I	AATT	9 cut(s)	301, 354, 429, 448, 1155, 1212, 1308, 1707, 1789
SseBI	AGGCCT	1 cut(s)	1648
SsiI	CCGC	3 cut(s)	260, 611, 645
SspMI	CTAG	3 cut(s)	572, 1289, 1293
SstI	GAGCTC	1 cut(s)	405
StuI	AGGCCT	1 cut(s)	1648
StyD4I	CCNGG	5 cut(s)	204, 289, 434, 631, 663
StyI	CCWWGG	3 cut(s)	82, 1401, 1638
TaaI	ACNGT	7 cut(s)	564, 689, 890, 1007, 1202, 1429, 1622
TaiI	ACGT	2 cut(s)	395, 591
TaqI	TCGA	5 cut(s)	213, 332, 1210, 1724, 1771
TasI	AATT	9 cut(s)	301, 354, 429, 448, 1155, 1212, 1308, 1707, 1789
TatI	WGTACW	5 cut(s)	305, 452, 599, 1068, 1325
TfiI	GAWTC	6 cut(s)	189, 210, 502, 846, 944, 1303
TscAI	CASTG	4 cut(s)	352, 694, 906, 1744
TseI	GCWGC	7 cut(s)	668, 671, 704, 731, 937, 1169, 1519
TspDTI	ATGAA	5 cut(s)	150, 181, 376, 754, 1316
TspRI	CASTG	4 cut(s)	352, 694, 906, 1744
Vha464I	CTTAAG	1 cut(s)	470
VpaK11BI	GGWCC	3 cut(s)	136, 647, 799
VspI	ATTAAT	1 cut(s)	1788
XagI	CCTNNNNNAGG	1 cut(s)	654
XceI	RCATGY	3 cut(s)	151, 1075, 1617
XcmI	CCANNNNNNNNNTGG	1 cut(s)	287
XhoI	CTCGAG	1 cut(s)	1770
XmiI	GTMKAC	4 cut(s)	118, 983, 1376, 1724
XspI	CTAG	3 cut(s)	572, 1289, 1293
ZrmI	AGTACT	1 cut(s)	1327
Zsp2I	ATGCAT	1 cut(s)	1244

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.