Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0004418

Physical Location & Seq

Genomic Coordinates Reverse (-)

63686640 .. 63689373

Gene Structure 2734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00213230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGCTTTCTTAATGCGTATGTTGAGTGGGCGAGGTCTTGGCATTTTTGGGCTCTTGTTATTGCTTAGTTGTAGGTTCAGCCATGGTGTTGAGAGTGATATAAACTGCTTGAGAAGTATAAAAGCAGCATTGGAGGATCCTTTAGGCATGTTAACCTCATGGGATTTTAACAATGCTACCGAAGGATTCATCTGTCACTTCCTGGGAATCGAGTGTTGGCACCCTGATGAGAGCAAAGTTTTAAACATCAAGCTTGCGGATTTGGGACTCAAAGGCCACTTTCCTCGTGGTGTAGGGAATTGTACAAGCTTAACAGGCTTGGATCTTTCGAGCAACAACCTCAGCGGACCTATTCCTGATGATATTGGTCGTTTAATCCCTTTCATTACGTCGCTTGAGCTCTCGTCCAACAGCTTCTCAGGGCCAATTCCCAGGAATATCTCCAATTGTACTTATCTGAATGTCCTTAAGCTTGACAACAACAAGTTCACGGGTCAGATTCCTGCAGAACTTGGTCAGCTCAGTAGGCTTAAAACATTTAGCGTGGCCAACAATCAACTGTCTGGGCCAGTCCCCACCTTCAACGTTAAGGATAGTACAATCGGAGCGGACAGCTATGCAAACAATCCTGGACTTTGTGGCGGTCCTTTGGAAGGTTGCCAGGCAGCTGCAAAGAAGTCCAACAGTGTAGTTATCGTGGCAGCAGGTGTTGGGGGTGCAACTTTTGCAGCATTAGTTGTGATTATTGGTTTGTTCTTCTTCATGCGTAGAGTGTCTGCAAGGAAGAAGGAGGAGGACCCTGAAGGCAACAAATGGGCAAGGAGTTTGAAGGGAACTAAAGGAATCAAGGTTTCCATGTTCAAGAAGTCGGTTTCTAAAATGAGACTGAGTGATCTCATGACGGCTACCAACAATTTCAGCAAAGACAATATCATTGGCTCAGGAAGAACTGGTACCGTTTACAAGGCAGTGCTTGATGATGGCACCTCACTTATGGTCAAGAGGCTGCATGAATCTCAATACTCTGAGAAAGAGTTTCTGTCTGAGATGTCTACTCTGGGTGGTGTAGAACACCGTAACTTGGTTCCCCTTTTGGGTTTTTGTGTGGCAAAGAAGGAAAGGCTTTTGGTGTATAAGTACATGCCTCATGGTACCCTCCATGACCAGCTACATCCTGTGGAAGCTGATGGTGCCAAGATTATGGACTGGCCTACAAGGCTGAAAATTGGGATAGGAGCAGCCAGAGGATTAGCGTGGCTTCATCATAACTGTAATCCTCGAATTATCCACCGAAACATAAGCTCCAAATGCATCTTACTGGATGCAGATTTTGAACCGAAGATTTCTGATTTTGGCCTAGCTAGGCTCATGAATCCAATTGATACACATTTGAGTACTTTTGTTAATGGAGAGTTCGGAGATCTGGGTTATGTGGCTCCTGAGTATACAAGAACTTTAGTGGCCACTCCCAAGGGGGATGTTTACAGCTTTGGAACTGTTCTTCTTGAGTTGGTTACTGGTGAAAGAGCTACCCATATTTCTAAAGCTCCAGAAGATTTCAAAGGAAACTTGGTGGAATGGATATTGCAGCTGTCAAGCAAATCTCAACTCACAGATGCGATTGACAAATCCTTGATTGGAAAGGGTGTGGATGAGGAGGTTTTCCAGTTCCTTAAAGTTGCATGCAACTGTGTGGTGCCTACTTCCAAGGAGAGGCCTACTATGTTTGAAGTATTCCAGCTTCTGCGAGCCATCGGACAGAAATATAACTTTACAATTGAAGAGGAGATGTCGACGCCTTCAGACACTGCTGATTGTGCAGGAGAACTCATTGTTGCTCGAGAGATGATGGAGATTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0031348 GO:0033612 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0060548 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

620

Amino Acids

67.83

Weight (kDa)

7.19

Isoelectric Point (pI)

29.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	31 - 73	5.2e-06	Leucine rich repeat N-terminal domain
Pkinase	PF00069	307 - 580	8.1e-35	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	309 - 577	1.5e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004418)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48380
fragaria_vesca	FvH4_2g17440 FvH4_2g17440 FvH4_2g17440
malus_domestica	MD05G1153300.v1.1
prunus_persica	Prupe.8G186700_v2.0.a1
pyrus_communis	pycom05g14770 pycom10g12770
rosa_chinensis	RchiOBHm_Chr6g0248541 RchiOBHm_Chr6g0282151
rosa_laevigata	RLG00000012905 RLG00000015144
rosa_multiflora	Rmu_sc0002553.1_g000025 Rmu_sc0002553.1_g000026 Rmu_sc0011940.1_g000001 Rmu_sc0021471.1_g000006
rosa_roxburghii	Rroxscaffold_7G00186440 Rroxscaffold_7G00213230
rosa_rugosa	Rorug05G0532000 Rorug06G0145800
rosa_samantha	Rh6AG048900 Rh6AG258800 Rh6BG044100 Rh6BG044400 Rh6BG262100 Rh6CG041000 Rh6CG261100 Rh6DG037200 Rh6DG253100
rosa_wichuraiana	Rw6G004150 Rw6G004230 Rw6G022400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	695
Acc36I	ACCTGC	1 cut(s)	695
Acc65I	GGTACC	2 cut(s)	953, 1151
AccB1I	GGYRCC	6 cut(s)	219, 953, 983, 1151, 1190, 1696
AccBSI	CCGCTC	1 cut(s)	608
AccI	GTMKAC	3 cut(s)	1052, 1445, 1793
AciI	CCGC	4 cut(s)	257, 345, 608, 642
AclI	AACGTT	1 cut(s)	585
AclWI	GGATC	3 cut(s)	131, 144, 330
AcoI	YGGCCR	2 cut(s)	546, 1461
AcuI	CTGAAG	2 cut(s)	822, 1785
AcyI	GRCGYC	1 cut(s)	1796
AfaI	GTAC	7 cut(s)	304, 451, 598, 955, 1139, 1153, 1396
AfiI	CCNNNNNNNGG	4 cut(s)	653, 1081, 1094, 1713
AflII	CTTAAG	1 cut(s)	467
AgsI	TTSAA	7 cut(s)	583, 829, 862, 1334, 1561, 1730, 1781
AjnI	CCWGG	4 cut(s)	201, 431, 628, 660
AjuI	GAANNNNNNNTTGG	2 cut(s)	199, 231
Alw21I	GWGCWC	1 cut(s)	402
Alw26I	GTCTC	1 cut(s)	877
AlwI	GGATC	3 cut(s)	131, 144, 330
AlwNI	CAGNNNCTG	2 cut(s)	1744, 1808
Ama87I	CYCGRG	1 cut(s)	1839
AoxI	GGCC	8 cut(s)	274, 422, 546, 566, 1208, 1354, 1461, 1715
ApeKI	GCWGC	8 cut(s)	125, 665, 668, 701, 728, 1006, 1238, 1588
AseI	ATTAAT	1 cut(s)	1857
Asp718I	GGTACC	2 cut(s)	953, 1151
AspS9I	GGNCC	5 cut(s)	347, 422, 566, 644, 796
AsuHPI	GGTGA	1 cut(s)	1532
AvaI	CYCGRG	1 cut(s)	1839
AvaII	GGWCC	3 cut(s)	347, 644, 796
BalI	TGGCCA	2 cut(s)	548, 1463
BamHI	GGATCC	1 cut(s)	136
BanI	GGYRCC	6 cut(s)	219, 953, 983, 1151, 1190, 1696
BanII	GRGCYC	2 cut(s)	54, 402
BarI	GAAGNNNNNNTAC	4 cut(s)	937, 969, 1725, 1757
BauI	CACGAG	1 cut(s)	285
Bbv12I	GWGCWC	1 cut(s)	402
BbvCI	CCTCAGC	1 cut(s)	341
BbvI	GCAGC	8 cut(s)	137, 655, 677, 713, 740, 993, 1250, 1600
BccI	CCATC	4 cut(s)	974, 1181, 1760, 1843
BceAI	ACGGC	1 cut(s)	918
BciT130I	CCWGG	4 cut(s)	203, 433, 630, 662
BcoDI	GTCTC	1 cut(s)	877
BfaI	CTAG	2 cut(s)	1358, 1362
BfmI	CTRYAG	1 cut(s)	504
BfrI	CTTAAG	1 cut(s)	467
BfuAI	ACCTGC	1 cut(s)	695
BglI	GCCNNNNNGGC	1 cut(s)	1216
BglII	AGATCT	1 cut(s)	1420
BisI	GCNGC	8 cut(s)	126, 666, 669, 702, 729, 1007, 1239, 1589
BlsI	GCNGC	8 cut(s)	127, 667, 670, 703, 730, 1008, 1240, 1590
BmcAI	AGTACT	1 cut(s)	1396
Bme1390I	CCNGG	4 cut(s)	203, 433, 630, 662
Bme18I	GGWCC	3 cut(s)	347, 644, 796
BmeT110I	CYCGRG	1 cut(s)	1839
BmgT120I	GGNCC	5 cut(s)	347, 422, 566, 644, 796
BmrFI	CCNGG	4 cut(s)	203, 433, 630, 662
BmsI	GCATC	3 cut(s)	1312, 1320, 1606
BpmI	CTGGAG	1 cut(s)	1533
Bpu10I	CCTNAGC	2 cut(s)	341, 940
BpuEI	CTTGAG	3 cut(s)	130, 416, 1526
BsaHI	GRCGYC	1 cut(s)	1796
BsaJI	CCNNGG	5 cut(s)	82, 202, 431, 1470, 1707
BsaXI	ACNNNNNCTCC	2 cut(s)	1286, 1316
Bsc4I	CCNNNNNNNGG	4 cut(s)	653, 1081, 1094, 1713
Bse1I	ACTGG	6 cut(s)	569, 955, 1211, 1323, 1522, 1666
BseBI	CCWGG	4 cut(s)	203, 433, 630, 662
BseDI	CCNNGG	5 cut(s)	82, 202, 431, 1470, 1707
BseGI	GGATG	4 cut(s)	1171, 1327, 1483, 1657
BseLI	CCNNNNNNNGG	4 cut(s)	653, 1081, 1094, 1713
BseMII	CTCAG	8 cut(s)	355, 432, 535, 878, 954, 1017, 1035, 1431
BseNI	ACTGG	6 cut(s)	569, 955, 1211, 1323, 1522, 1666
BseRI	GAGGAG	3 cut(s)	806, 1670, 1799
BseXI	GCAGC	8 cut(s)	137, 655, 677, 713, 740, 993, 1250, 1600
BsgI	GTGCAG	1 cut(s)	1839
BshFI	GGCC	8 cut(s)	276, 424, 548, 568, 1210, 1356, 1463, 1717
BshNI	GGYRCC	6 cut(s)	219, 953, 983, 1151, 1190, 1696
BsiHKAI	GWGCWC	1 cut(s)	402
BsiHKCI	CYCGRG	1 cut(s)	1839
BslFI	GGGAC	2 cut(s)	279, 557
BslI	CCNNNNNNNGG	4 cut(s)	653, 1081, 1094, 1713
BsmAI	GTCTC	1 cut(s)	877
BsmFI	GGGAC	2 cut(s)	279, 557
BsnI	GGCC	8 cut(s)	276, 424, 548, 568, 1210, 1356, 1463, 1717
BsoBI	CYCGRG	1 cut(s)	1839
Bsp1286I	GDGCHC	2 cut(s)	54, 402
Bsp1407I	TGTACA	1 cut(s)	302
Bsp143I	GATC	4 cut(s)	136, 322, 892, 1420
Bsp19I	CCATGG	1 cut(s)	82
BspACI	CCGC	4 cut(s)	257, 345, 608, 642
BspANI	GGCC	8 cut(s)	276, 424, 548, 568, 1210, 1356, 1463, 1717
BspCNI	CTCAG	8 cut(s)	354, 431, 534, 879, 953, 1018, 1036, 1432
BspHI	TCATGA	2 cut(s)	897, 1368
BspMAI	CTGCAG	1 cut(s)	508
BspMI	ACCTGC	1 cut(s)	695
BspPI	GGATC	3 cut(s)	131, 144, 330
BspT107I	GGYRCC	6 cut(s)	219, 953, 983, 1151, 1190, 1696
BspTI	CTTAAG	1 cut(s)	467
BsrBI	CCGCTC	1 cut(s)	608
BsrGI	TGTACA	1 cut(s)	302
BsrI	ACTGG	6 cut(s)	569, 955, 1211, 1323, 1522, 1666
BssECI	CCNNGG	5 cut(s)	82, 202, 431, 1470, 1707
BssMI	GATC	4 cut(s)	136, 322, 892, 1420
BssNAI	GTATAC	1 cut(s)	1446
BssNI	GRCGYC	1 cut(s)	1796
BssSI	CACGAG	1 cut(s)	285
BssT1I	CCWWGG	3 cut(s)	82, 1470, 1707
Bst1107I	GTATAC	1 cut(s)	1446
Bst2BI	CACGAG	1 cut(s)	285
Bst2UI	CCWGG	4 cut(s)	203, 433, 630, 662
Bst4CI	ACNGT	7 cut(s)	561, 686, 958, 1076, 1271, 1498, 1691
Bst6I	CTCTTC	1 cut(s)	1776
BstACI	GRCGYC	1 cut(s)	1796
BstAFI	CTTAAG	1 cut(s)	467
BstAPI	GCANNNNNTGC	1 cut(s)	725
BstAUI	TGTACA	1 cut(s)	302
BstC8I	GCNNGC	3 cut(s)	255, 1684, 1749
BstDEI	CTNAG	9 cut(s)	65, 341, 418, 521, 887, 940, 1026, 1044, 1440
BstDSI	CCRYGG	1 cut(s)	82
BstENI	CCTNNNNNAGG	1 cut(s)	651
BstF5I	GGATG	4 cut(s)	1171, 1327, 1483, 1657
BstKTI	GATC	4 cut(s)	139, 325, 895, 1423
BstMAI	GTCTC	1 cut(s)	877
BstMBI	GATC	4 cut(s)	136, 322, 892, 1420
BstMWI	GCNNNNNNNGC	7 cut(s)	315, 526, 725, 1190, 1216, 1308, 1817
BstNI	CCWGG	4 cut(s)	203, 433, 630, 662
BstNSI	RCATGY	3 cut(s)	151, 1144, 1686
BstSCI	CCNGG	4 cut(s)	201, 431, 628, 660
BstSFI	CTRYAG	1 cut(s)	504
BstV1I	GCAGC	8 cut(s)	137, 655, 677, 713, 740, 993, 1250, 1600
BstX2I	RGATCY	3 cut(s)	136, 322, 1420
BstXI	CCANNNNNNTGG	1 cut(s)	1201
BstYI	RGATCY	3 cut(s)	136, 322, 1420
BstZ17I	GTATAC	1 cut(s)	1446
BsuRI	GGCC	8 cut(s)	276, 424, 548, 568, 1210, 1356, 1463, 1717
BtgI	CCRYGG	1 cut(s)	82
BtsCI	GGATG	4 cut(s)	1171, 1327, 1483, 1657
BtsI	GCAGTG	2 cut(s)	975, 1806
BtsIMutI	CAGTG	3 cut(s)	691, 975, 1806
BveI	ACCTGC	1 cut(s)	695
Cac8I	GCNNGC	3 cut(s)	255, 1684, 1749
CaiI	CAGNNNCTG	2 cut(s)	1744, 1808
CciI	TCATGA	2 cut(s)	897, 1368
Cfr13I	GGNCC	5 cut(s)	347, 422, 566, 644, 796
CseI	GACGC	1 cut(s)	1804
Csp6I	GTAC	7 cut(s)	303, 450, 597, 954, 1138, 1152, 1395
CviQI	GTAC	7 cut(s)	303, 450, 597, 954, 1138, 1152, 1395
DdeI	CTNAG	9 cut(s)	65, 341, 418, 521, 887, 940, 1026, 1044, 1440
DpnI	GATC	4 cut(s)	138, 324, 894, 1422
DpnII	GATC	4 cut(s)	136, 322, 892, 1420
DraI	TTTAAA	1 cut(s)	243
EaeI	YGGCCR	2 cut(s)	546, 1461
Eam1104I	CTCTTC	1 cut(s)	1776
EarI	CTCTTC	1 cut(s)	1776
Ecl136II	GAGCTC	1 cut(s)	400
Eco130I	CCWWGG	3 cut(s)	82, 1470, 1707
Eco147I	AGGCCT	1 cut(s)	1717
Eco24I	GRGCYC	2 cut(s)	54, 402
Eco47I	GGWCC	3 cut(s)	347, 644, 796
Eco53kI	GAGCTC	1 cut(s)	400
Eco57I	CTGAAG	2 cut(s)	822, 1785
Eco88I	CYCGRG	1 cut(s)	1839
EcoICRI	GAGCTC	1 cut(s)	400
EcoNI	CCTNNNNNAGG	1 cut(s)	651
EcoO109I	RGGNCCY	1 cut(s)	796
EcoRII	CCWGG	4 cut(s)	201, 431, 628, 660
EcoT14I	CCWWGG	3 cut(s)	82, 1470, 1707
EcoT22I	ATGCAT	1 cut(s)	1313
EcoT38I	GRGCYC	2 cut(s)	54, 402
ErhI	CCWWGG	3 cut(s)	82, 1470, 1707
FaqI	GGGAC	2 cut(s)	279, 557
FblI	GTMKAC	3 cut(s)	1052, 1445, 1793
Fnu4HI	GCNGC	8 cut(s)	126, 666, 669, 702, 729, 1007, 1239, 1589
FokI	GGATG	4 cut(s)	1158, 1334, 1490, 1664
FriOI	GRGCYC	2 cut(s)	54, 402
Fsp4HI	GCNGC	8 cut(s)	126, 666, 669, 702, 729, 1007, 1239, 1589
FspBI	CTAG	2 cut(s)	1358, 1362
GluI	GCNGC	8 cut(s)	126, 666, 669, 702, 729, 1007, 1239, 1589
GsuI	CTGGAG	1 cut(s)	1533
HaeIII	GGCC	8 cut(s)	276, 424, 548, 568, 1210, 1356, 1463, 1717
HgaI	GACGC	1 cut(s)	1804
Hin1I	GRCGYC	1 cut(s)	1796
HincII	GTYRAC	2 cut(s)	153, 1794
HindII	GTYRAC	2 cut(s)	153, 1794
HindIII	AAGCTT	3 cut(s)	251, 307, 470
HinfI	GANTC	7 cut(s)	186, 207, 267, 499, 843, 1013, 1372
HpaI	GTTAAC	1 cut(s)	153
HphI	GGTGA	1 cut(s)	1532
Hpy166II	GTNNAC	7 cut(s)	153, 489, 961, 1053, 1446, 1483, 1794
Hpy188I	TCNGA	9 cut(s)	459, 498, 605, 1027, 1045, 1348, 1418, 1757, 1804
Hpy8I	GTNNAC	7 cut(s)	153, 489, 961, 1053, 1446, 1483, 1794
Hpy99I	CGWCG	2 cut(s)	394, 1798
HpyAV	CCTTC	8 cut(s)	176, 589, 647, 781, 797, 823, 1108, 1809
HpyCH4III	ACNGT	7 cut(s)	561, 686, 958, 1076, 1271, 1498, 1691
HpyCH4IV	ACGT	2 cut(s)	389, 585
HpyF10VI	GCNNNNNNNGC	7 cut(s)	315, 526, 725, 1190, 1216, 1308, 1817
HpyF3I	CTNAG	9 cut(s)	65, 341, 418, 521, 887, 940, 1026, 1044, 1440
HpySE526I	ACGT	2 cut(s)	389, 585
Hsp92I	GRCGYC	1 cut(s)	1796
KpnI	GGTACC	2 cut(s)	957, 1155
KspAI	GTTAAC	1 cut(s)	153
Kzo9I	GATC	4 cut(s)	136, 322, 892, 1420
LmnI	GCTCC	5 cut(s)	605, 1235, 1307, 1441, 1552
Lsp1109I	GCAGC	8 cut(s)	137, 655, 677, 713, 740, 993, 1250, 1600
LweI	GCATC	3 cut(s)	1312, 1320, 1606
MaeI	CTAG	2 cut(s)	1358, 1362
MaeII	ACGT	2 cut(s)	389, 585
MaeIII	GTNAC	3 cut(s)	194, 1076, 1513
MalI	GATC	4 cut(s)	138, 324, 894, 1422
MbiI	CCGCTC	1 cut(s)	608
MboI	GATC	4 cut(s)	136, 322, 892, 1420
MboII	GAAGA	8 cut(s)	748, 751, 796, 957, 1351, 1493, 1565, 1793
MfeI	CAATTG	3 cut(s)	445, 1377, 1776
MflI	RGATCY	3 cut(s)	136, 322, 1420
MhlI	GDGCHC	2 cut(s)	54, 402
MlsI	TGGCCA	2 cut(s)	548, 1463
MluCI	AATT	9 cut(s)	298, 426, 445, 913, 1224, 1281, 1377, 1776, 1858
MluNI	TGGCCA	2 cut(s)	548, 1463
MlyI	GAGTC	1 cut(s)	261
MmeI	TCCRAC	2 cut(s)	432, 705
Mox20I	TGGCCA	2 cut(s)	548, 1463
Mph1103I	ATGCAT	1 cut(s)	1313
MscI	TGGCCA	2 cut(s)	548, 1463
MslI	CAYNNNNRTG	1 cut(s)	225
Msp20I	TGGCCA	2 cut(s)	548, 1463
MspA1I	CMGCKG	3 cut(s)	345, 668, 1591
MspCI	CTTAAG	1 cut(s)	467
MspR9I	CCNGG	4 cut(s)	203, 433, 630, 662
MunI	CAATTG	3 cut(s)	445, 1377, 1776
MvaI	CCWGG	4 cut(s)	203, 433, 630, 662
MwoI	GCNNNNNNNGC	7 cut(s)	315, 526, 725, 1190, 1216, 1308, 1817
NcoI	CCATGG	1 cut(s)	82
NdeII	GATC	4 cut(s)	136, 322, 892, 1420
NmuCI	GTSAC	1 cut(s)	194
NsiI	ATGCAT	1 cut(s)	1313
NspI	RCATGY	3 cut(s)	151, 1144, 1686
PaeI	GCATGC	1 cut(s)	1686
PaeR7I	CTCGAG	1 cut(s)	1839
PagI	TCATGA	2 cut(s)	897, 1368
PaqCI	CACCTGC	1 cut(s)	695
PceI	AGGCCT	1 cut(s)	1717
PfeI	GAWTC	6 cut(s)	186, 207, 499, 843, 1013, 1372
PfoI	TCCNGGA	1 cut(s)	628
PkrI	GCNGC	8 cut(s)	127, 667, 670, 703, 730, 1008, 1240, 1590
PleI	GAGTC	1 cut(s)	261
PpsI	GAGTC	1 cut(s)	261
PpuMI	RGGWCCY	1 cut(s)	796
PshBI	ATTAAT	1 cut(s)	1857
Psp124BI	GAGCTC	1 cut(s)	402
Psp1406I	AACGTT	1 cut(s)	585
Psp5II	RGGWCCY	1 cut(s)	796
Psp6I	CCWGG	4 cut(s)	201, 431, 628, 660
PspGI	CCWGG	4 cut(s)	201, 431, 628, 660
PspPI	GGNCC	5 cut(s)	347, 422, 566, 644, 796
PspPPI	RGGWCCY	1 cut(s)	796
PstI	CTGCAG	1 cut(s)	508
PstNI	CAGNNNCTG	2 cut(s)	1744, 1808
PsuI	RGATCY	3 cut(s)	136, 322, 1420
PvuII	CAGCTG	2 cut(s)	668, 1591
RsaI	GTAC	7 cut(s)	304, 451, 598, 955, 1139, 1153, 1396
RsaNI	GTAC	7 cut(s)	303, 450, 597, 954, 1138, 1152, 1395
RseI	CAYNNNNRTG	1 cut(s)	225
SacI	GAGCTC	1 cut(s)	402
SalI	GTCGAC	1 cut(s)	1792
SatI	GCNGC	8 cut(s)	126, 666, 669, 702, 729, 1007, 1239, 1589
Sau3AI	GATC	4 cut(s)	136, 322, 892, 1420
Sau96I	GGNCC	5 cut(s)	347, 422, 566, 644, 796
ScaI	AGTACT	1 cut(s)	1396
SchI	GAGTC	1 cut(s)	261
ScrFI	CCNGG	4 cut(s)	203, 433, 630, 662
SduI	GDGCHC	2 cut(s)	54, 402
SfaNI	GCATC	3 cut(s)	1312, 1320, 1606
SfcI	CTRYAG	1 cut(s)	504
Sfr274I	CTCGAG	1 cut(s)	1839
SinI	GGWCC	3 cut(s)	347, 644, 796
SlaI	CTCGAG	1 cut(s)	1839
SmiMI	CAYNNNNRTG	1 cut(s)	225
SmlI	CTYRAG	5 cut(s)	109, 395, 467, 1505, 1839
SmoI	CTYRAG	5 cut(s)	109, 395, 467, 1505, 1839
SphI	GCATGC	1 cut(s)	1686
Sse9I	AATT	9 cut(s)	298, 426, 445, 913, 1224, 1281, 1377, 1776, 1858
SseBI	AGGCCT	1 cut(s)	1717
SsiI	CCGC	4 cut(s)	257, 345, 608, 642
SspMI	CTAG	2 cut(s)	1358, 1362
SstI	GAGCTC	1 cut(s)	402
StuI	AGGCCT	1 cut(s)	1717
StyD4I	CCNGG	4 cut(s)	201, 431, 628, 660
StyI	CCWWGG	3 cut(s)	82, 1470, 1707
TaaI	ACNGT	7 cut(s)	561, 686, 958, 1076, 1271, 1498, 1691
TaiI	ACGT	2 cut(s)	392, 588
TaqI	TCGA	5 cut(s)	210, 329, 1279, 1793, 1840
TasI	AATT	9 cut(s)	298, 426, 445, 913, 1224, 1281, 1377, 1776, 1858
TatI	WGTACW	5 cut(s)	302, 449, 596, 1137, 1394
TfiI	GAWTC	6 cut(s)	186, 207, 499, 843, 1013, 1372
TscAI	CASTG	3 cut(s)	691, 975, 1813
TseFI	GTSAC	1 cut(s)	194
TseI	GCWGC	8 cut(s)	125, 665, 668, 701, 728, 1006, 1238, 1588
Tsp45I	GTSAC	1 cut(s)	194
TspDTI	ATGAA	6 cut(s)	178, 373, 751, 1026, 1250, 1385
TspRI	CASTG	3 cut(s)	691, 975, 1813
Vha464I	CTTAAG	1 cut(s)	467
VpaK11BI	GGWCC	3 cut(s)	347, 644, 796
VspI	ATTAAT	1 cut(s)	1857
XagI	CCTNNNNNAGG	1 cut(s)	651
XceI	RCATGY	3 cut(s)	151, 1144, 1686
XcmI	CCANNNNNNNNNTGG	1 cut(s)	284
XhoI	CTCGAG	1 cut(s)	1839
XmiI	GTMKAC	3 cut(s)	1052, 1445, 1793
XspI	CTAG	2 cut(s)	1358, 1362
ZrmI	AGTACT	1 cut(s)	1396
Zsp2I	ATGCAT	1 cut(s)	1313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.