Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0011339

Physical Location & Seq

Genomic Coordinates Reverse (-)

34987088 .. 34993972

Gene Structure 6885 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1219500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGGAGGGGTTTGAAAGTAGGGGTAGTATTCAAGAGGCTGCCTCTTCTATCCCGCAAGATCTCAACCAATTGCAGCTTAATTCCTCAGGAGAGGTATTCGACGCATCGCAGTATGCATTTTTTGGTAAAGATTCTGTTGAGGAAGTTGAATTGGGAGGTTTAGATGAAGAGGAGGCTCCAGTTGGGTTTGATGAGGAGGAGTTTCTGTATAATAGACAAGAGGTTGACATATCTCTATCTGATATTGATGACCTATCATTAACCTTTGAAAAGTTAAACAAGGATGTTAGTGGAACTAGGAGTGCTGGAGTAATTGGTGATAGAGGATCCAGAGAAAGTTCATCTGCTGCTGAGTGGGCGCAGGAGCATTTTCCTAACTGGATTGATGAAGAGATACTTGATGCTGAAAGCACTCAGGATGGGAAACGATGGTCTTCACACCCATATTCTTCAGCTCGTCCAGCAGACTCGATGCCTTTGTATAGAACTTCTTCATATCCTGAGCCCCAACAACAGCAGCTGCAGCAGCAGCAGCATCAACATTTTTCCAGTGAACCAATTCTGGTGCCGAAATCAGCTTTCACTTCTTATCCACCTCCAGGTGGCAGACCTCAGCAGGCTTCGCCAAACCGCCAAGCAAGCCACCTGAACCCATATCTTTCTGGTGGGCCCCAGGGGGGGTTGTCTTCACCAAACCTATCTCCTTACTCTAGCTCTCAACTTCAACTGAATGGATTACCTCATGTATCGCATTTTGGTGGAAATTTGCCTCAGCTTAACCCTGGTCTCTCTAATAGCCGACCCCAAAAGCAATGGGCCAATCAAAGTGGTGTTTATGGAGATCATCCGGGTCTTATGAACAATTTGTTGCAACAACAGCTAGCTCATCAGAATGGTTTAGTGCCTCCACAATTGATGCATCAGCAACAGTCACAACCACAGGATCCTAGACTGCATCATCCAGTTCAGCCATCATTTGCTAATTTGTCGGTAATGCAGTCTCAACTGTTTAACCCCCATCTTTCTGCATCCCCGCCCTTGGTGAGCAAGTTTGAAGCAATGCTTGGTATGGGTGATCTTGGAGATCAAAGGCCAAAATCAGCTCAGAAAGTTAGACCGAATATGCGTTTTTCTCAATATGGATTTGATACAGGTAGCCACAGGAGGGAAGGTGGGTGGCCACAATTTAGGTCCAAGTATATGACAGCTGATGAAATTGAAAATATACTCCGAATGCAGCTAGCTGCAACACACAGCAATGACCCATATGTCGATGATTACTACCACCAGTTTTGCCTTTCAAGAAAATCTGCTGGGGCCAAGTTGAAACACCATTTCTGCCCAACTCAATTAAGGGATCTTCCTCCTCGAGCACGAGCTAATACTGAACCACATGCTTTTCTCCAGGTTGATGCTCTTGGGAGAGTCCCCTTCTCCTCAATACGGAGGCCTCGCCCTCTTCTTGAAGTTGAGCCTCCAAATTCATCTAGCCCTGGCAACACTGAACAAAAGGTTTTTGAGAAGCCGCTAGAGCAGGAGCCAATGCTTGCTGCTAGGGTTGCAATTGAGGATGGGCTTTGTCTTCTCCTGGATGTGGATGACATTGATCGTTTTCTACAATTCAATCAACTCCAAGATGGTGGAACCCAAGTGAGGCGTCGGCGGCAGGCCTTGCTTGAAGGACTTGCAGGATCTCTTCAATTAGTTGACCCACTTGGCAACAATGGCCCCACGGTTGGGCTTCATAAGGATGATCTTGTATTTCTAAGGTTAGTCTCACTTCCCAAGGGCCGGAAGCTCCTGGCAAAGTACCTGCAGCTTTTATTTCCCGGTGGTGAGCTCATGCGAATAGTCTGTATGGCCATCTTTCGTCATTTAAGGTTCTTGTTTGGTAGCTACCCTTCTGATCCAGTGGCTGCAGAAACTACAAATATTCTTGCAAGGGTTGTTTCATCATGTGCTCGAGTTCTTGAGAGGGCAACTGAACTCTTAACTGATCCTCATGCTGCAAGCAACTACAATATGACCAATCGGCAACTTTGGCAGGCCTCCTTTGATGAATTCTTTGGCCTTCTGACCAAGTACTGTGTAAATAAATATGAAACTGTAATGCAGTCACTGCTAATGCAGGCCCCTCCGAATGTGGCTATTATTGGCTCAGATGCAGCCAGGGCAATTGGTCGTGAAATGCCAGTTGAACTGTTGCGTGCGAGCCTTCCTCACACTGATGAGCATCAGAGGCAGCTGTTGTTGGACTTCACGCAGCGGTCTATGCCCATAGGATCATCTAGCAGTGGTGATGGGGGAAATGGTTCTCACATGAATTCAGAGTCTGTGCTGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000290 GO:0000932 GO:0000956 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0033962 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

PAT1

Protein Analysis

782

Amino Acids

86.77

Weight (kDa)

5.69

Isoelectric Point (pI)

60.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79090 AT1G79090 AT1G79090
fragaria_vesca	FvH4_3g15840 FvH4_3g15840
malus_domestica	MD05G1219500.v1.1 MD10G1201900.v1.1
prunus_persica	Prupe.4G140400_v2.0.a1
pyrus_communis	pycom05g20090 pycom10g17270
rosa_chinensis	RchiOBHm_Chr5g0026641
rosa_laevigata	RLG00000032942
rosa_multiflora	Rmu_sc0004490.1_g000005
rosa_roxburghii	Rroxscaffold_1G00052830
rosa_rugosa	Rorug05G0094500
rosa_samantha	Rh5AG188000 Rh5BG184400 Rh5CG204300 Rh5DG186700
rosa_wichuraiana	Rw5G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1268
Acc36I	ACCTGC	1 cut(s)	1821
AccB1I	GGYRCC	1 cut(s)	565
AciI	CCGC	6 cut(s)	53, 631, 1034, 1526, 1663, 2266
AclWI	GGATC	9 cut(s)	321, 334, 938, 951, 1365, 1699, 1901, 1991, 2290
AcoI	YGGCCR	2 cut(s)	1178, 1860
AcsI	RAATTY	4 cut(s)	763, 1480, 2060, 2323
AcuI	CTGAAG	1 cut(s)	435
AcyI	GRCGYC	1 cut(s)	1657
AfaI	GTAC	2 cut(s)	1811, 2084
AjnI	CCWGG	8 cut(s)	598, 672, 781, 1404, 1492, 1587, 1800, 2168
AjuI	GAANNNNNNNTTGG	2 cut(s)	1047, 1079
Alw21I	GWGCWC	3 cut(s)	1375, 1842, 1963
Alw26I	GTCTC	3 cut(s)	791, 1005, 1780
AlwI	GGATC	9 cut(s)	321, 334, 938, 951, 1365, 1699, 1901, 1991, 2290
AlwNI	CAGNNNCTG	4 cut(s)	520, 1916, 2119, 2333
Ama87I	CYCGRG	2 cut(s)	1368, 1962
ApaI	GGGCCC	1 cut(s)	672
ApoI	RAATTY	4 cut(s)	763, 1480, 2060, 2323
Asp700I	GAANNNNTTC	3 cut(s)	490, 558, 2311
AspLEI	GCGC	1 cut(s)	361
AspS9I	GGNCC	8 cut(s)	668, 669, 816, 1191, 1317, 1727, 1789, 2131
AsuC2I	CCSGG	2 cut(s)	849, 1830
AsuHPI	GGTGA	6 cut(s)	329, 681, 1054, 1085, 1847, 2309
AsuNHI	GCTAGC	2 cut(s)	880, 1240
AvaI	CYCGRG	2 cut(s)	1368, 1962
AvaII	GGWCC	1 cut(s)	1191
AxyI	CCTNAGG	1 cut(s)	85
BaeGI	GKGCMC	1 cut(s)	672
BalI	TGGCCA	2 cut(s)	1180, 1862
BamHI	GGATCC	2 cut(s)	326, 943
BanI	GGYRCC	1 cut(s)	565
BanII	GRGCYC	3 cut(s)	507, 672, 1842
BarI	GAAGNNNNNNTAC	2 cut(s)	1885, 1917
BauI	CACGAG	1 cut(s)	1374
BbsI	GAAGAC	3 cut(s)	426, 678, 1574
Bbv12I	GWGCWC	3 cut(s)	1375, 1842, 1963
BbvCI	CCTCAGC	2 cut(s)	612, 771
BccI	CCATC	8 cut(s)	413, 423, 979, 1026, 1565, 1631, 1871, 2294
BciT130I	CCWGG	8 cut(s)	600, 674, 783, 1406, 1494, 1589, 1802, 2170
BcnI	CCSGG	2 cut(s)	849, 1830
BcoDI	GTCTC	3 cut(s)	791, 1005, 1780
BfaI	CTAG	9 cut(s)	297, 711, 881, 948, 1241, 1488, 1529, 1554, 2289
BfmI	CTRYAG	3 cut(s)	521, 1814, 1917
BfuAI	ACCTGC	1 cut(s)	1821
BglII	AGATCT	1 cut(s)	58
BmcAI	AGTACT	1 cut(s)	2084
Bme18I	GGWCC	1 cut(s)	1191
BmeT110I	CYCGRG	2 cut(s)	1368, 1962
BmgT120I	GGNCC	8 cut(s)	668, 669, 816, 1191, 1317, 1727, 1789, 2131
BmtI	GCTAGC	2 cut(s)	884, 1244
BpiI	GAAGAC	3 cut(s)	426, 678, 1574
BplI	GAGNNNNNCTC	4 cut(s)	26, 58, 2203, 2235
BpmI	CTGGAG	4 cut(s)	162, 327, 582, 1388
Bpu10I	CCTNAGC	3 cut(s)	501, 612, 771
BpuEI	CTTGAG	1 cut(s)	1991
BpuMI	CCSGG	2 cut(s)	849, 1830
BsaBI	GATNNNNATC	1 cut(s)	2232
BsaHI	GRCGYC	1 cut(s)	1657
BsaI	GGTCTC	1 cut(s)	791
BsaJI	CCNNGG	8 cut(s)	672, 673, 781, 1038, 1492, 1731, 1785, 2169
BsaXI	ACNNNNNCTCC	4 cut(s)	191, 221, 1156, 1186
Bse1I	ACTGG	7 cut(s)	179, 383, 549, 962, 1288, 1910, 2192
Bse21I	CCTNAGG	1 cut(s)	85
Bse3DI	GCAATG	3 cut(s)	818, 1065, 1264
Bse8I	GATNNNNATC	1 cut(s)	2232
BseBI	CCWGG	8 cut(s)	600, 674, 783, 1406, 1494, 1589, 1802, 2170
BseDI	CCNNGG	8 cut(s)	672, 673, 781, 1038, 1492, 1731, 1785, 2169
BseGI	GGATG	9 cut(s)	289, 424, 844, 958, 1028, 1576, 1597, 1603, 1756
BseJI	GATNNNNATC	1 cut(s)	2232
BseMI	GCAATG	3 cut(s)	818, 1065, 1264
BseMII	CTCAG	9 cut(s)	99, 342, 428, 492, 626, 785, 1118, 2172, 2330
BseNI	ACTGG	7 cut(s)	179, 383, 549, 962, 1288, 1910, 2192
BseRI	GAGGAG	5 cut(s)	185, 209, 212, 1356, 1426
BseSI	GKGCMC	1 cut(s)	672
BseYI	CCCAGC	1 cut(s)	1313
BshNI	GGYRCC	1 cut(s)	565
BsiHKAI	GWGCWC	3 cut(s)	1375, 1842, 1963
BsiHKCI	CYCGRG	2 cut(s)	1368, 1962
BsiSI	CCGG	3 cut(s)	848, 1792, 1830
BslFI	GGGAC	1 cut(s)	1412
BsmAI	GTCTC	3 cut(s)	791, 1005, 1780
BsmFI	GGGAC	1 cut(s)	1412
BsmI	GAATGC	1 cut(s)	1239
Bso31I	GGTCTC	1 cut(s)	791
BsoBI	CYCGRG	2 cut(s)	1368, 1962
Bsp120I	GGGCCC	1 cut(s)	668
Bsp1286I	GDGCHC	5 cut(s)	507, 672, 1375, 1842, 1963
BspACI	CCGC	6 cut(s)	53, 631, 1034, 1526, 1663, 2266
BspCNI	CTCAG	9 cut(s)	98, 343, 427, 493, 625, 784, 1117, 2171, 2331
BspMAI	CTGCAG	3 cut(s)	525, 1818, 1921
BspMI	ACCTGC	1 cut(s)	1821
BspOI	GCTAGC	2 cut(s)	884, 1244
BspPI	GGATC	9 cut(s)	321, 334, 938, 951, 1365, 1699, 1901, 1991, 2290
BspT107I	GGYRCC	1 cut(s)	565
BspTNI	GGTCTC	1 cut(s)	791
BsrDI	GCAATG	3 cut(s)	818, 1065, 1264
BsrI	ACTGG	7 cut(s)	179, 383, 549, 962, 1288, 1910, 2192
BssECI	CCNNGG	8 cut(s)	672, 673, 781, 1038, 1492, 1731, 1785, 2169
BssNI	GRCGYC	1 cut(s)	1657
BssSI	CACGAG	1 cut(s)	1374
BssT1I	CCWWGG	2 cut(s)	1038, 1785
Bst2BI	CACGAG	1 cut(s)	1374
Bst2UI	CCWGG	8 cut(s)	600, 674, 783, 1406, 1494, 1589, 1802, 2170
Bst4CI	ACNGT	6 cut(s)	930, 1008, 1735, 2087, 2107, 2202
Bst6I	CTCTTC	5 cut(s)	49, 162, 384, 1464, 1701
BstACI	GRCGYC	1 cut(s)	1657
BstAPI	GCANNNNNTGC	2 cut(s)	1672, 2119
BstDSI	CCRYGG	1 cut(s)	1731
BstF5I	GGATG	9 cut(s)	289, 424, 844, 958, 1028, 1576, 1597, 1603, 1756
BstHHI	GCGC	1 cut(s)	361
BstMAI	GTCTC	3 cut(s)	791, 1005, 1780
BstNI	CCWGG	8 cut(s)	600, 674, 783, 1406, 1494, 1589, 1802, 2170
BstNSI	RCATGY	1 cut(s)	1397
BstSFI	CTRYAG	3 cut(s)	521, 1814, 1917
BstSLI	GKGCMC	1 cut(s)	672
BstV2I	GAAGAC	3 cut(s)	426, 678, 1574
BstX2I	RGATCY	5 cut(s)	58, 326, 943, 1357, 1691
BstXI	CCANNNNNNTGG	1 cut(s)	1640
BstYI	RGATCY	5 cut(s)	58, 326, 943, 1357, 1691
Bsu36I	CCTNAGG	1 cut(s)	85
BtgI	CCRYGG	1 cut(s)	1731
BtgZI	GCGATG	1 cut(s)	90
BtsCI	GGATG	9 cut(s)	289, 424, 844, 958, 1028, 1576, 1597, 1603, 1756
BtsI	GCAGTG	2 cut(s)	2117, 2299
BtsIMutI	CAGTG	6 cut(s)	556, 1500, 1917, 2117, 2223, 2299
BveI	ACCTGC	1 cut(s)	1821
CaiI	CAGNNNCTG	4 cut(s)	520, 1916, 2119, 2333
CfoI	GCGC	1 cut(s)	361
Cfr13I	GGNCC	8 cut(s)	668, 669, 816, 1191, 1317, 1727, 1789, 2131
CseI	GACGC	2 cut(s)	110, 1646
Csp6I	GTAC	2 cut(s)	1810, 2083
CspCI	CAANNNNNGTGG	4 cut(s)	808, 843, 1274, 1309
CviAII	CATG	6 cut(s)	743, 1394, 1843, 1956, 2003, 2320
CviQI	GTAC	2 cut(s)	1810, 2083
DrdI	GACNNNNNNGTC	1 cut(s)	1268
DseDI	GACNNNNNNGTC	1 cut(s)	1268
EaeI	YGGCCR	2 cut(s)	1178, 1860
Eam1104I	CTCTTC	5 cut(s)	49, 162, 384, 1464, 1701
EarI	CTCTTC	5 cut(s)	49, 162, 384, 1464, 1701
Ecl136II	GAGCTC	1 cut(s)	1840
Eco130I	CCWWGG	2 cut(s)	1038, 1785
Eco147I	AGGCCT	3 cut(s)	1450, 1670, 2048
Eco24I	GRGCYC	3 cut(s)	507, 672, 1842
Eco31I	GGTCTC	1 cut(s)	791
Eco47I	GGWCC	1 cut(s)	1191
Eco53kI	GAGCTC	1 cut(s)	1840
Eco57I	CTGAAG	1 cut(s)	435
Eco81I	CCTNAGG	1 cut(s)	85
Eco88I	CYCGRG	2 cut(s)	1368, 1962
EcoICRI	GAGCTC	1 cut(s)	1840
EcoO109I	RGGNCCY	2 cut(s)	669, 2131
EcoRI	GAATTC	2 cut(s)	2060, 2323
EcoRII	CCWGG	8 cut(s)	598, 672, 781, 1404, 1492, 1587, 1800, 2168
EcoT14I	CCWWGG	2 cut(s)	1038, 1785
EcoT22I	ATGCAT	2 cut(s)	118, 921
EcoT38I	GRGCYC	3 cut(s)	507, 672, 1842
ErhI	CCWWGG	2 cut(s)	1038, 1785
FaeI	CATG	6 cut(s)	746, 1397, 1846, 1959, 2006, 2323
FalI	AAGNNNNNCTT	4 cut(s)	381, 413, 1047, 1079
FaqI	GGGAC	1 cut(s)	1412
FatI	CATG	6 cut(s)	742, 1393, 1842, 1955, 2002, 2319
FauI	CCCGC	2 cut(s)	60, 1041
FauNDI	CATATG	1 cut(s)	1267
FokI	GGATG	9 cut(s)	296, 431, 831, 945, 1015, 1583, 1604, 1610, 1763
FriOI	GRGCYC	3 cut(s)	507, 672, 1842
FspBI	CTAG	9 cut(s)	297, 711, 881, 948, 1241, 1488, 1529, 1554, 2289
GlaI	GCGC	1 cut(s)	360
GsaI	CCCAGC	1 cut(s)	1317
GsuI	CTGGAG	4 cut(s)	162, 327, 582, 1388
HapII	CCGG	3 cut(s)	848, 1792, 1830
HgaI	GACGC	2 cut(s)	110, 1646
HhaI	GCGC	1 cut(s)	361
Hin1I	GRCGYC	1 cut(s)	1657
Hin1II	CATG	6 cut(s)	746, 1397, 1846, 1959, 2006, 2323
Hin6I	GCGC	1 cut(s)	359
HinP1I	GCGC	1 cut(s)	359
HincII	GTYRAC	2 cut(s)	226, 1708
HindII	GTYRAC	2 cut(s)	226, 1708
HinfI	GANTC	4 cut(s)	131, 467, 1425, 2330
HpaII	CCGG	3 cut(s)	848, 1792, 1830
HphI	GGTGA	6 cut(s)	329, 681, 1054, 1085, 1847, 2309
Hpy166II	GTNNAC	3 cut(s)	226, 554, 1708
Hpy188III	TCNNGA	9 cut(s)	32, 87, 330, 416, 500, 1302, 1463, 1970, 2183
Hpy8I	GTNNAC	3 cut(s)	226, 554, 1708
Hpy99I	CGWCG	2 cut(s)	104, 1662
HpyAV	CCTTC	6 cut(s)	1163, 1441, 1673, 1911, 2081, 2225
HpyCH4III	ACNGT	6 cut(s)	930, 1008, 1735, 2087, 2107, 2202
Hsp92I	GRCGYC	1 cut(s)	1657
Hsp92II	CATG	6 cut(s)	746, 1397, 1846, 1959, 2006, 2323
HspAI	GCGC	1 cut(s)	359
LmnI	GCTCC	4 cut(s)	181, 364, 1537, 1803
MaeI	CTAG	9 cut(s)	297, 711, 881, 948, 1241, 1488, 1529, 1554, 2289
MaeIII	GTNAC	2 cut(s)	930, 2115
MfeI	CAATTG	4 cut(s)	68, 911, 1563, 2175
MflI	RGATCY	5 cut(s)	58, 326, 943, 1357, 1691
MhlI	GDGCHC	5 cut(s)	507, 672, 1375, 1842, 1963
MlsI	TGGCCA	2 cut(s)	1180, 1862
MluNI	TGGCCA	2 cut(s)	1180, 1862
MlyI	GAGTC	3 cut(s)	461, 1434, 2339
MmeI	TCCRAC	1 cut(s)	2232
Mox20I	TGGCCA	2 cut(s)	1180, 1862
Mph1103I	ATGCAT	2 cut(s)	118, 921
MroXI	GAANNNNTTC	3 cut(s)	490, 558, 2311
MscI	TGGCCA	2 cut(s)	1180, 1862
MseI	TTAA	8 cut(s)	78, 260, 275, 777, 1011, 1352, 1877, 1991
MslI	CAYNNNNRTG	5 cut(s)	756, 891, 1257, 1749, 2226
Msp20I	TGGCCA	2 cut(s)	1180, 1862
MspA1I	CMGCKG	4 cut(s)	520, 1208, 2245, 2266
MspI	CCGG	3 cut(s)	848, 1792, 1830
MunI	CAATTG	4 cut(s)	68, 911, 1563, 2175
Mva1269I	GAATGC	1 cut(s)	1239
MvaI	CCWGG	8 cut(s)	600, 674, 783, 1406, 1494, 1589, 1802, 2170
NciI	CCSGG	2 cut(s)	849, 1830
NdeI	CATATG	1 cut(s)	1267
NheI	GCTAGC	2 cut(s)	880, 1240
NlaIII	CATG	6 cut(s)	746, 1397, 1846, 1959, 2006, 2323
NmuCI	GTSAC	2 cut(s)	930, 2115
NsiI	ATGCAT	2 cut(s)	118, 921
NspI	RCATGY	1 cut(s)	1397
PaeR7I	CTCGAG	2 cut(s)	1368, 1962
PasI	CCCWGGG	1 cut(s)	673
PceI	AGGCCT	3 cut(s)	1450, 1670, 2048
PctI	GAATGC	1 cut(s)	1239
PdmI	GAANNNNTTC	3 cut(s)	490, 558, 2311
PfeI	GAWTC	1 cut(s)	131
PfoI	TCCNGGA	1 cut(s)	1587
PleI	GAGTC	3 cut(s)	461, 1433, 2338
PpsI	GAGTC	3 cut(s)	461, 1433, 2338
Psp124BI	GAGCTC	1 cut(s)	1842
Psp6I	CCWGG	8 cut(s)	598, 672, 781, 1404, 1492, 1587, 1800, 2168
PspFI	CCCAGC	1 cut(s)	1313
PspGI	CCWGG	8 cut(s)	598, 672, 781, 1404, 1492, 1587, 1800, 2168
PspOMI	GGGCCC	1 cut(s)	668
PspPI	GGNCC	8 cut(s)	668, 669, 816, 1191, 1317, 1727, 1789, 2131
PspXI	VCTCGAGB	2 cut(s)	1368, 1962
PstI	CTGCAG	3 cut(s)	525, 1818, 1921
PstNI	CAGNNNCTG	4 cut(s)	520, 1916, 2119, 2333
PsuI	RGATCY	5 cut(s)	58, 326, 943, 1357, 1691
PvuII	CAGCTG	3 cut(s)	520, 1208, 2245
RsaI	GTAC	2 cut(s)	1811, 2084
RsaNI	GTAC	2 cut(s)	1810, 2083
RseI	CAYNNNNRTG	5 cut(s)	756, 891, 1257, 1749, 2226
SacI	GAGCTC	1 cut(s)	1842
SaqAI	TTAA	8 cut(s)	78, 260, 275, 777, 1011, 1352, 1877, 1991
Sau96I	GGNCC	8 cut(s)	668, 669, 816, 1191, 1317, 1727, 1789, 2131
ScaI	AGTACT	1 cut(s)	2084
SchI	GAGTC	3 cut(s)	461, 1434, 2339
SduI	GDGCHC	5 cut(s)	507, 672, 1375, 1842, 1963
SfcI	CTRYAG	3 cut(s)	521, 1814, 1917
Sfr274I	CTCGAG	2 cut(s)	1368, 1962
SinI	GGWCC	1 cut(s)	1191
SlaI	CTCGAG	2 cut(s)	1368, 1962
SmiMI	CAYNNNNRTG	5 cut(s)	756, 891, 1257, 1749, 2226
SmlI	CTYRAG	3 cut(s)	1368, 1962, 1970
SmoI	CTYRAG	3 cut(s)	1368, 1962, 1970
SseBI	AGGCCT	3 cut(s)	1450, 1670, 2048
SsiI	CCGC	6 cut(s)	53, 631, 1034, 1526, 1663, 2266
SspI	AATATT	1 cut(s)	1933
SspMI	CTAG	9 cut(s)	297, 711, 881, 948, 1241, 1488, 1529, 1554, 2289
SstI	GAGCTC	1 cut(s)	1842
StuI	AGGCCT	3 cut(s)	1450, 1670, 2048
StyI	CCWWGG	2 cut(s)	1038, 1785
TaaI	ACNGT	6 cut(s)	930, 1008, 1735, 2087, 2107, 2202
TaqI	TCGA	5 cut(s)	99, 470, 1272, 1369, 1963
TaqII	GACCGA	1 cut(s)	1132
TatI	WGTACW	1 cut(s)	2082
TauI	GCSGC	2 cut(s)	1528, 1666
TfiI	GAWTC	1 cut(s)	131
Tru1I	TTAA	8 cut(s)	78, 260, 275, 777, 1011, 1352, 1877, 1991
Tru9I	TTAA	8 cut(s)	78, 260, 275, 777, 1011, 1352, 1877, 1991
TscAI	CASTG	6 cut(s)	556, 1507, 1917, 2124, 2230, 2299
TseFI	GTSAC	2 cut(s)	930, 2115
Tsp45I	GTSAC	2 cut(s)	930, 2115
TspGWI	ACGGA	1 cut(s)	1459
TspRI	CASTG	6 cut(s)	556, 1507, 1917, 2124, 2230, 2299
VpaK11BI	GGWCC	1 cut(s)	1191
XapI	RAATTY	4 cut(s)	763, 1480, 2060, 2323
XceI	RCATGY	1 cut(s)	1397
XhoI	CTCGAG	2 cut(s)	1368, 1962
XmnI	GAANNNNTTC	3 cut(s)	490, 558, 2311
XspI	CTAG	9 cut(s)	297, 711, 881, 948, 1241, 1488, 1529, 1554, 2289
ZrmI	AGTACT	1 cut(s)	2084
Zsp2I	ATGCAT	2 cut(s)	118, 921

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.