Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0011339

Physical Location & Seq

Genomic Coordinates Reverse (-)

29981906 .. 29989046

Gene Structure 7141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1201900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGGAGGGGTTTGAGAGTAGGGATAGTAATCAAGAGGCTGCCTCTTCTATCCCTCAAGATCTCAACCATTTGCAGCTTAATTCCTCAGGAGAGGTATTTGACGCATCACAGTATGCATTTTTTGGTAAAGATTCTGTTGGGGAAGTTGAGTTGGGAGGTTTAGATGAAGAAGAGGAGGCTCCAGTCGATGAGGAGGAGTTTCTATATAATAGACAAGAGGGTGACATATCTCTATCTGATATTGATGACCTATCATTAACCTTTGAAAAGTTACACAAGGATGTTAGTGGACCTAGGAGTGCTGGAGTAATTGGTGATAGAGGATCCAGAGAAAGTTCATCTGCCGCTGAGTGGGCGCAGGAGCATTTCCCTAACTGGATTGATGAAGAGATACTTGATGCTGAAAGCACTGAGGGCGGGAAACGATGGTCTTCACACCCATATTCTTCAGCTCATCCCGCAGAGTTGATGCCGCCTTTGTGCAGAACTTCTTCATATCCTGAGCCCCAACAACAGCAGCTACAGCAGCTACAGCAGCAGCACCATCAACATTTTTCCAGTGAACCAATTCTGGTGCCGAAATCAGTTTTCACTTCTTATCCGCCTCCTGGTGGCAGACCTCAGCAGGCTTCGCCGAACCGCCAAGCAAGCCACCTGAACCCATATCTTTCTGGTGGACCCCGGGGGGGATTATCTTCACCAAATCTATCTCCTTACTCTAGTTCTCAACTTCAACTGAATGGATTACCTCATGGATCACATTTTGGGGGAAATTTGCCTCAGCTTAACCCTGGCCTGTCTAATAGCCGACCCCAAAAGCAACGGGCCAATCAAAGTGGTGTTTATGGAGATCATCCTGGTCTTATGAACAATTTGTTGCAACAACAGCTAGCTCATCAGAATGGTTTAATGCCTCCACAATTGATGCATCAGCAACAGTCACAACCACTAGCTCATCAGAATGGTTTAATGCCTCCACAATTGATGCATCAGCAACAGTCACAACCTCAGGACCCTAGACTGCATCATCCAGTTCAGCCACCGTTTAATCATTTGCCGGCAATGCAGTCTCAACTATTTAACCCCCATCTTTCTGCATCCCCGCCCTTGATGAGCAAGTTTGAAGCAATGCTTGGTATGGGTGATCTTGGAGATCAAGGGCCAAAATTAGCTCAGAAAGGTAGACCAAATATGCGTTTTTCTCAACATGGATTTGATACAGCTAGCCACAGGAGGGAAGGTGGGTGGCCACAATTTAGGTCTAAGTATATGACAGCTGAAGAAATTGAAAATATACTCCGAATGCAGCTAGCTGCGACACACAGCAATGACCCATATGTGGATGATTACTACCACCAGTTTTGCCTTGCAAGAAAATCTGCTGGGGCCAAGTTGAAACACCATTTCTGCCCAACTCAATTAAGGGATCTTCCTCCTCGAGCACGAGCTAATACTGAACCACATGCTTTTCTCCAGGTTGATGCTCTTGGGAGGGTCCCCTTTTCCTCAATACGTAGGCCTCGCCCTCTTCTTGAAGTTGAGCCTCCAAATTCATCTAGCCCTGGCAACACTGAACAAAAGGTTTCTGAGAAGCCGCTAGAACAGGAGCCAATGCTTGGTGCTAGGGTTGCAATTGAGGATGGGCTTTGTCTTCTCCTGGATGTGGATGACATTGATCGTTTTCTGCAATTCAATCAACTCCAAGATGGTGGAACCCAGTTGAGGCGTAGGCGGCAGGCCTTGCTTGAAGGACTTGCAGGATCTCTTCAATTGGTTGACCCACTCGGGAACAATGGCCCCACAGTTGGGCTTCATAAGGATGATCTTGTATTTCTAAGGTTAGTCTCACTTCCCAAGGGCCGGAAGCTCCTGGCAAAGTACCTGCAGCTTTTATTTCAAGGTGGTGAGCTCATGCGAGTAGTCTGTATGGCCATCTTTCGTCATTTAAGGTTCTTGTTTGGTAGCTACCCTACTGATCCAGGGGCTATAGAAACTACAAGTGTTCTTGCAAGGGTTGTTTCATCATGTGCTCGAGTTCTTGAGAGGGCAACTGAACTCTTAACTGATCCTCATGCTGCAAGCAACTACAATATGACCAATCGCCAACTTTGGCAGGCCTCCTTTGATGAATTCTTTGGCCTTCTGACCAAGTATTGTGTAAATAAATATGATACAGTTATGCAGTCACTGCTAACTCAGGCCCCTCCGAATGTGACTGTTATTGGCTCAGATGCAGCCAGAGCTATTGGTCGTGAAATGCCTGTTGAGCTGTTGCGTGCTAGCCTTCCTCACACTGATGAGCATCAGAGACAACTGTTGTTGGACTTCACGCAGCGGTCTATGCCCATAGGAGCATCTAACAGTCGTGATGGGGGAAATGGTGCTCACATGAATTCAGAGTCTGTGCTGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000290 GO:0000932 GO:0000956 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0033962 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

PAT1

Protein Analysis

805

Amino Acids

89.28

Weight (kDa)

5.91

Isoelectric Point (pI)

63.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79090 AT1G79090 AT1G79090
fragaria_vesca	FvH4_3g15840 FvH4_3g15840
malus_domestica	MD05G1219500.v1.1 MD10G1201900.v1.1
prunus_persica	Prupe.4G140400_v2.0.a1
pyrus_communis	pycom05g20090 pycom10g17270
rosa_chinensis	RchiOBHm_Chr5g0026641
rosa_laevigata	RLG00000032942
rosa_multiflora	Rmu_sc0004490.1_g000005
rosa_roxburghii	Rroxscaffold_1G00052830
rosa_rugosa	Rorug05G0094500
rosa_samantha	Rh5AG188000 Rh5BG184400 Rh5CG204300 Rh5DG186700
rosa_wichuraiana	Rw5G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1890
AccB1I	GGYRCC	1 cut(s)	574
AccB7I	CCANNNNNTGG	1 cut(s)	1616
AccI	GTMKAC	1 cut(s)	1183
AclWI	GGATC	7 cut(s)	318, 331, 763, 1434, 1768, 1970, 2060
AcoI	YGGCCR	2 cut(s)	1247, 1929
AcsI	RAATTY	4 cut(s)	772, 1549, 2129, 2392
AcuI	CTGAAG	2 cut(s)	432, 1299
AfaI	GTAC	1 cut(s)	1880
AjnI	CCWGG	8 cut(s)	607, 790, 856, 1473, 1561, 1656, 1869, 1978
AjuI	GAANNNNNNNTTGG	2 cut(s)	1116, 1148
Alw21I	GWGCWC	4 cut(s)	1444, 1911, 2032, 2386
Alw26I	GTCTC	3 cut(s)	1074, 1849, 2302
AlwI	GGATC	7 cut(s)	318, 331, 763, 1434, 1768, 1970, 2060
AlwNI	CAGNNNCTG	2 cut(s)	2188, 2402
Ama87I	CYCGRG	4 cut(s)	681, 1437, 1784, 2031
ApoI	RAATTY	4 cut(s)	772, 1549, 2129, 2392
Asp700I	GAANNNNTTC	2 cut(s)	490, 567
AspA2I	CCTAGG	1 cut(s)	293
AspLEI	GCGC	1 cut(s)	358
AsuC2I	CCSGG	2 cut(s)	682, 683
AsuHPI	GGTGA	5 cut(s)	233, 326, 690, 1154, 1916
AsuNHI	GCTAGC	4 cut(s)	889, 1223, 1309, 2279
AvaI	CYCGRG	4 cut(s)	681, 1437, 1784, 2031
AvaII	GGWCC	4 cut(s)	290, 677, 1012, 1495
AvrII	CCTAGG	1 cut(s)	293
AxyI	CCTNAGG	2 cut(s)	85, 1008
BalI	TGGCCA	2 cut(s)	1249, 1931
BamHI	GGATCC	1 cut(s)	323
BanI	GGYRCC	1 cut(s)	574
BanII	GRGCYC	2 cut(s)	507, 1911
BauI	CACGAG	1 cut(s)	1443
BbsI	GAAGAC	2 cut(s)	423, 1643
Bbv12I	GWGCWC	4 cut(s)	1444, 1911, 2032, 2386
BbvCI	CCTCAGC	2 cut(s)	621, 780
BccI	CCATC	7 cut(s)	420, 552, 1095, 1634, 1700, 1940, 2363
BciT130I	CCWGG	8 cut(s)	609, 792, 858, 1475, 1563, 1658, 1871, 1980
BcnI	CCSGG	2 cut(s)	682, 683
BcoDI	GTCTC	3 cut(s)	1074, 1849, 2302
BfmI	CTRYAG	4 cut(s)	521, 530, 1883, 1986
BfuAI	ACCTGC	1 cut(s)	1890
BglII	AGATCT	1 cut(s)	58
BlnI	CCTAGG	1 cut(s)	293
BlpI	GCTNAGC	1 cut(s)	2408
Bme18I	GGWCC	4 cut(s)	290, 677, 1012, 1495
BmeT110I	CYCGRG	4 cut(s)	681, 1437, 1784, 2031
BmrI	ACTGGG	1 cut(s)	1711
BmtI	GCTAGC	4 cut(s)	893, 1227, 1313, 2283
BmuI	ACTGGG	1 cut(s)	1711
BpiI	GAAGAC	2 cut(s)	423, 1643
BplI	GAGNNNNNCTC	2 cut(s)	26, 58
BpmI	CTGGAG	3 cut(s)	165, 324, 1457
Bpu10I	CCTNAGC	3 cut(s)	501, 621, 780
Bpu1102I	GCTNAGC	1 cut(s)	2408
BpuEI	CTTGAG	2 cut(s)	39, 2060
BpuMI	CCSGG	2 cut(s)	682, 683
BsaAI	YACGTR	1 cut(s)	1514
BsaBI	GATNNNNATC	2 cut(s)	27, 2301
BsaJI	CCNNGG	8 cut(s)	293, 680, 681, 682, 790, 1561, 1854, 1979
BsaXI	ACNNNNNCTCC	2 cut(s)	1225, 1255
Bse118I	RCCGGY	1 cut(s)	1057
Bse1I	ACTGG	6 cut(s)	182, 380, 558, 1031, 1357, 1717
Bse21I	CCTNAGG	2 cut(s)	85, 1008
Bse3DI	GCAATG	3 cut(s)	1068, 1134, 1333
Bse8I	GATNNNNATC	2 cut(s)	27, 2301
BseBI	CCWGG	8 cut(s)	609, 792, 858, 1475, 1563, 1658, 1871, 1980
BseDI	CCNNGG	8 cut(s)	293, 680, 681, 682, 790, 1561, 1854, 1979
BseJI	GATNNNNATC	2 cut(s)	27, 2301
BseMI	GCAATG	3 cut(s)	1068, 1134, 1333
BseNI	ACTGG	6 cut(s)	182, 380, 558, 1031, 1357, 1717
BseRI	GAGGAG	4 cut(s)	188, 206, 209, 1425
BseYI	CCCAGC	1 cut(s)	1382
BsgI	GTGCAG	1 cut(s)	502
BshNI	GGYRCC	1 cut(s)	574
BsiHKAI	GWGCWC	4 cut(s)	1444, 1911, 2032, 2386
BsiHKCI	CYCGRG	4 cut(s)	681, 1437, 1784, 2031
BsiSI	CCGG	3 cut(s)	682, 1058, 1861
BslFI	GGGAC	1 cut(s)	1481
BsmAI	GTCTC	3 cut(s)	1074, 1849, 2302
BsmFI	GGGAC	1 cut(s)	1481
BsmI	GAATGC	1 cut(s)	1308
BsoBI	CYCGRG	4 cut(s)	681, 1437, 1784, 2031
Bsp1286I	GDGCHC	5 cut(s)	507, 1444, 1911, 2032, 2386
Bsp1720I	GCTNAGC	1 cut(s)	2408
BspMAI	CTGCAG	1 cut(s)	1887
BspMI	ACCTGC	1 cut(s)	1890
BspOI	GCTAGC	4 cut(s)	893, 1227, 1313, 2283
BspPI	GGATC	7 cut(s)	318, 331, 763, 1434, 1768, 1970, 2060
BspT107I	GGYRCC	1 cut(s)	574
BsrDI	GCAATG	3 cut(s)	1068, 1134, 1333
BsrFI	RCCGGY	1 cut(s)	1057
BsrI	ACTGG	6 cut(s)	182, 380, 558, 1031, 1357, 1717
BssAI	RCCGGY	1 cut(s)	1057
BssECI	CCNNGG	8 cut(s)	293, 680, 681, 682, 790, 1561, 1854, 1979
BssSI	CACGAG	1 cut(s)	1443
BssT1I	CCWWGG	2 cut(s)	293, 1854
Bst2BI	CACGAG	1 cut(s)	1443
Bst2UI	CCWGG	8 cut(s)	609, 792, 858, 1475, 1563, 1658, 1871, 1980
Bst4CI	ACNGT	9 cut(s)	111, 939, 999, 1044, 1804, 2176, 2218, 2316, 2363
Bst6I	CTCTTC	5 cut(s)	49, 165, 381, 1533, 1770
BstAPI	GCANNNNNTGC	2 cut(s)	1741, 2188
BstBAI	YACGTR	1 cut(s)	1514
BstHHI	GCGC	1 cut(s)	358
BstMAI	GTCTC	3 cut(s)	1074, 1849, 2302
BstNI	CCWGG	8 cut(s)	609, 792, 858, 1475, 1563, 1658, 1871, 1980
BstNSI	RCATGY	1 cut(s)	1466
BstSFI	CTRYAG	4 cut(s)	521, 530, 1883, 1986
BstSNI	TACGTA	1 cut(s)	1514
BstV2I	GAAGAC	2 cut(s)	423, 1643
BstX2I	RGATCY	4 cut(s)	58, 323, 1426, 1760
BstXI	CCANNNNNNTGG	1 cut(s)	1709
BstYI	RGATCY	4 cut(s)	58, 323, 1426, 1760
Bsu36I	CCTNAGG	2 cut(s)	85, 1008
BtsI	GCAGTG	1 cut(s)	2186
BtsIMutI	CAGTG	5 cut(s)	408, 565, 1569, 2186, 2292
BveI	ACCTGC	1 cut(s)	1890
CaiI	CAGNNNCTG	2 cut(s)	2188, 2402
CfoI	GCGC	1 cut(s)	358
Cfr10I	RCCGGY	1 cut(s)	1057
Cfr9I	CCCGGG	1 cut(s)	681
CseI	GACGC	1 cut(s)	110
Csp6I	GTAC	1 cut(s)	1879
CspCI	CAANNNNNGTGG	4 cut(s)	817, 852, 1343, 1378
CviAII	CATG	7 cut(s)	752, 1208, 1463, 1912, 2025, 2072, 2389
CviQI	GTAC	1 cut(s)	1879
EaeI	YGGCCR	2 cut(s)	1247, 1929
Eam1104I	CTCTTC	5 cut(s)	49, 165, 381, 1533, 1770
EarI	CTCTTC	5 cut(s)	49, 165, 381, 1533, 1770
EciI	GGCGGA	1 cut(s)	591
Ecl136II	GAGCTC	1 cut(s)	1909
Eco105I	TACGTA	1 cut(s)	1514
Eco130I	CCWWGG	2 cut(s)	293, 1854
Eco147I	AGGCCT	3 cut(s)	1519, 1739, 2117
Eco24I	GRGCYC	2 cut(s)	507, 1911
Eco47I	GGWCC	4 cut(s)	290, 677, 1012, 1495
Eco53kI	GAGCTC	1 cut(s)	1909
Eco57I	CTGAAG	2 cut(s)	432, 1299
Eco81I	CCTNAGG	2 cut(s)	85, 1008
Eco88I	CYCGRG	4 cut(s)	681, 1437, 1784, 2031
EcoICRI	GAGCTC	1 cut(s)	1909
EcoO109I	RGGNCCY	3 cut(s)	1012, 1495, 2200
EcoRI	GAATTC	2 cut(s)	2129, 2392
EcoRII	CCWGG	8 cut(s)	607, 790, 856, 1473, 1561, 1656, 1869, 1978
EcoT14I	CCWWGG	2 cut(s)	293, 1854
EcoT22I	ATGCAT	3 cut(s)	118, 930, 990
EcoT38I	GRGCYC	2 cut(s)	507, 1911
ErhI	CCWWGG	2 cut(s)	293, 1854
FaeI	CATG	7 cut(s)	755, 1211, 1466, 1915, 2028, 2075, 2392
FalI	AAGNNNNNCTT	4 cut(s)	378, 410, 1116, 1148
FaqI	GGGAC	1 cut(s)	1481
FatI	CATG	7 cut(s)	751, 1207, 1462, 1911, 2024, 2071, 2388
FauI	CCCGC	3 cut(s)	410, 466, 1110
FauNDI	CATATG	1 cut(s)	1336
FblI	GTMKAC	1 cut(s)	1183
FriOI	GRGCYC	2 cut(s)	507, 1911
GlaI	GCGC	1 cut(s)	357
GsaI	CCCAGC	1 cut(s)	1386
GsuI	CTGGAG	3 cut(s)	165, 324, 1457
HapII	CCGG	3 cut(s)	682, 1058, 1861
HgaI	GACGC	1 cut(s)	110
HhaI	GCGC	1 cut(s)	358
Hin1II	CATG	7 cut(s)	755, 1211, 1466, 1915, 2028, 2075, 2392
Hin6I	GCGC	1 cut(s)	356
HinP1I	GCGC	1 cut(s)	356
HincII	GTYRAC	1 cut(s)	1777
HindII	GTYRAC	1 cut(s)	1777
HinfI	GANTC	2 cut(s)	131, 2399
HpaII	CCGG	3 cut(s)	682, 1058, 1861
HphI	GGTGA	5 cut(s)	233, 326, 690, 1154, 1916
Hpy166II	GTNNAC	5 cut(s)	290, 563, 677, 1184, 1777
Hpy8I	GTNNAC	5 cut(s)	290, 563, 677, 1184, 1777
HpyAV	CCTTC	4 cut(s)	1232, 1742, 2150, 2294
HpyCH4III	ACNGT	9 cut(s)	111, 939, 999, 1044, 1804, 2176, 2218, 2316, 2363
HpyCH4IV	ACGT	1 cut(s)	1513
HpySE526I	ACGT	1 cut(s)	1513
Hsp92II	CATG	7 cut(s)	755, 1211, 1466, 1915, 2028, 2075, 2392
HspAI	GCGC	1 cut(s)	356
KflI	GGGWCCC	1 cut(s)	1495
KroI	GCCGGC	1 cut(s)	1057
KroNI	GCCGGC	1 cut(s)	1059
LmnI	GCTCC	5 cut(s)	184, 361, 1606, 1872, 2351
MaeII	ACGT	1 cut(s)	1513
MaeIII	GTNAC	6 cut(s)	221, 270, 939, 999, 2184, 2212
MfeI	CAATTG	4 cut(s)	920, 980, 1632, 1769
MflI	RGATCY	4 cut(s)	58, 323, 1426, 1760
MhlI	GDGCHC	5 cut(s)	507, 1444, 1911, 2032, 2386
MlsI	TGGCCA	2 cut(s)	1249, 1931
MluNI	TGGCCA	2 cut(s)	1249, 1931
MlyI	GAGTC	1 cut(s)	2408
MmeI	TCCRAC	1 cut(s)	2301
Mox20I	TGGCCA	2 cut(s)	1249, 1931
Mph1103I	ATGCAT	3 cut(s)	118, 930, 990
MroNI	GCCGGC	1 cut(s)	1057
MroXI	GAANNNNTTC	2 cut(s)	490, 567
MscI	TGGCCA	2 cut(s)	1249, 1931
MslI	CAYNNNNRTG	6 cut(s)	279, 900, 960, 1326, 1818, 2295
Msp20I	TGGCCA	2 cut(s)	1249, 1931
MspA1I	CMGCKG	3 cut(s)	347, 1277, 2335
MspI	CCGG	3 cut(s)	682, 1058, 1861
MunI	CAATTG	4 cut(s)	920, 980, 1632, 1769
Mva1269I	GAATGC	1 cut(s)	1308
MvaI	CCWGG	8 cut(s)	609, 792, 858, 1475, 1563, 1658, 1871, 1980
NaeI	GCCGGC	1 cut(s)	1059
NciI	CCSGG	2 cut(s)	682, 683
NdeI	CATATG	1 cut(s)	1336
NgoMIV	GCCGGC	1 cut(s)	1057
NheI	GCTAGC	4 cut(s)	889, 1223, 1309, 2279
NlaIII	CATG	7 cut(s)	755, 1211, 1466, 1915, 2028, 2075, 2392
NmuCI	GTSAC	5 cut(s)	221, 939, 999, 2184, 2212
NsiI	ATGCAT	3 cut(s)	118, 930, 990
NspI	RCATGY	1 cut(s)	1466
PaeR7I	CTCGAG	2 cut(s)	1437, 2031
PceI	AGGCCT	3 cut(s)	1519, 1739, 2117
PctI	GAATGC	1 cut(s)	1308
PdiI	GCCGGC	1 cut(s)	1059
PdmI	GAANNNNTTC	2 cut(s)	490, 567
PfeI	GAWTC	1 cut(s)	131
PflMI	CCANNNNNTGG	1 cut(s)	1616
PfoI	TCCNGGA	1 cut(s)	1656
PleI	GAGTC	1 cut(s)	2407
PpsI	GAGTC	1 cut(s)	2407
Ppu21I	YACGTR	1 cut(s)	1514
PpuMI	RGGWCCY	2 cut(s)	1012, 1495
Psp124BI	GAGCTC	1 cut(s)	1911
Psp5II	RGGWCCY	2 cut(s)	1012, 1495
Psp6I	CCWGG	8 cut(s)	607, 790, 856, 1473, 1561, 1656, 1869, 1978
PspFI	CCCAGC	1 cut(s)	1382
PspGI	CCWGG	8 cut(s)	607, 790, 856, 1473, 1561, 1656, 1869, 1978
PspPPI	RGGWCCY	2 cut(s)	1012, 1495
PspXI	VCTCGAGB	2 cut(s)	1437, 2031
PstI	CTGCAG	1 cut(s)	1887
PstNI	CAGNNNCTG	2 cut(s)	2188, 2402
PsuI	RGATCY	4 cut(s)	58, 323, 1426, 1760
PvuII	CAGCTG	1 cut(s)	1277
RsaI	GTAC	1 cut(s)	1880
RsaNI	GTAC	1 cut(s)	1879
RseI	CAYNNNNRTG	6 cut(s)	279, 900, 960, 1326, 1818, 2295
SacI	GAGCTC	1 cut(s)	1911
SchI	GAGTC	1 cut(s)	2408
SduI	GDGCHC	5 cut(s)	507, 1444, 1911, 2032, 2386
SfcI	CTRYAG	4 cut(s)	521, 530, 1883, 1986
Sfr274I	CTCGAG	2 cut(s)	1437, 2031
SinI	GGWCC	4 cut(s)	290, 677, 1012, 1495
SlaI	CTCGAG	2 cut(s)	1437, 2031
SmaI	CCCGGG	1 cut(s)	683
SmiMI	CAYNNNNRTG	6 cut(s)	279, 900, 960, 1326, 1818, 2295
SmlI	CTYRAG	4 cut(s)	54, 1437, 2031, 2039
SmoI	CTYRAG	4 cut(s)	54, 1437, 2031, 2039
SnaBI	TACGTA	1 cut(s)	1514
SseBI	AGGCCT	3 cut(s)	1519, 1739, 2117
SstI	GAGCTC	1 cut(s)	1911
StuI	AGGCCT	3 cut(s)	1519, 1739, 2117
StyI	CCWWGG	2 cut(s)	293, 1854
TaaI	ACNGT	9 cut(s)	111, 939, 999, 1044, 1804, 2176, 2218, 2316, 2363
TaiI	ACGT	1 cut(s)	1516
TaqI	TCGA	3 cut(s)	186, 1438, 2032
TauI	GCSGC	4 cut(s)	347, 475, 1597, 1735
TfiI	GAWTC	1 cut(s)	131
TscAI	CASTG	5 cut(s)	415, 565, 1576, 2193, 2299
TseFI	GTSAC	5 cut(s)	221, 939, 999, 2184, 2212
Tsp45I	GTSAC	5 cut(s)	221, 939, 999, 2184, 2212
TspMI	CCCGGG	1 cut(s)	681
TspRI	CASTG	5 cut(s)	415, 565, 1576, 2193, 2299
Van91I	CCANNNNNTGG	1 cut(s)	1616
VpaK11BI	GGWCC	4 cut(s)	290, 677, 1012, 1495
XapI	RAATTY	4 cut(s)	772, 1549, 2129, 2392
XceI	RCATGY	1 cut(s)	1466
XhoI	CTCGAG	2 cut(s)	1437, 2031
XmaI	CCCGGG	1 cut(s)	681
XmaJI	CCTAGG	1 cut(s)	293
XmiI	GTMKAC	1 cut(s)	1183
XmnI	GAANNNNTTC	2 cut(s)	490, 567
Zsp2I	ATGCAT	3 cut(s)	118, 930, 990

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.