Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004490.1

Orthogroup ID

OG0011339

Physical Location & Seq

Genomic Coordinates Forward (+)

24721 .. 31449

Gene Structure 6729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004490.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2469 bp

atggagaggtttgagagtgggagtagtattcaggaggcgccctgttctattcctcaggatctcaaccaatttggagttaattcttcaggcgaggtattcgatgcatcacaatatgcattttttggtcaagattctgttgaggaagttgagttgggaggtttagaagatgaagaggagactgcagttgcgcttgaagaggaggagtttctatataacaaagaagagggtggtgtctctctatctgatgctgatgatctgtctttaacttttgaaaagttgaacaaggatgtaaatggaactaggagcactggaataattggtgatagaggatccagagaaagttcatctgctgctgaatgggtgcaggaaagtttccctaactggattgatgaagaaatatttgatgctgaaagcattcaagatgggaaaagatggtcttcaggaccgttttcttctattcgtcctacagaagcaaagcctttgtacagaacttcttcatatcctgagcccccacagctgccacagcagcagcaacaacatcaatatttttctagcgaaccaattctggtgccaaaatcttcttttacttcatatccacctccaggtggcagatctcagcagggttcacctaaccaccaatcaggccacatgaacattccttatgctgctggtggacctcaggggggaatatcttcaccaaacctttctccctactctaactctccacttcaaatgactgggttacctcatggatcacattttggtggaaatttgcctcatctgactcctggtcttcctgttaatactcgtccccttactcaatgggccaaccaaagtggctcatttggagatcatcctagtcatttaaataatctgttgcagcaacagttatctcatcagaatggtttgcctccacagttgatgcatcagccacagcagccgcatcctagactgcaccatccagttcagcaaccattcagccatatttcagcaatgcagtctcaactatttaacccccaccttcctccatccccacccttgatgaacaagtttgaagcaatgttcggtatgagtgatattagagatgaaaggtcaagattagctcagaaaggtagacagaatatgcgtttttctcaacatggctttgatacaggtagctacaaaagtggtggtgggtggccatcatttaggtccaagtatatggcagctgatgaaattgagggtatacttcgaatgcagcttgctgcaacacacagcaatgacccatatgtagatgattattaccaccagtattgccttgcaagaaaatctgctggggcgaagttgaaacatcatttctgtccaactcatttaagggatcttcctcctcgggcacgagctaatgctgaaccacatgcttttctccaagttgatgctcttgggagggtcccattctcttcaatacgcaggcctcgccctcttcttgaagtggagccaccaaattcatctagtccgggtaacactgaacagaaggtttctgagaagcctctagaacaggagccaatgcttgctgctagggttacaattgaggatggactttgtcttctcctggatgtggatgatatcgatcgttttttacaattcaatcagctccaagatggtggaacccagttgaggcgtaggcgtcagggcttgctagaagggctcgcagcatctctacaattggttgatccacttgggaaaaatgacgacacagatgggctggctctcaaggatgatcttgtgttcctgaggttagtctctctacccaagggccgaaagcttcttgtcaagtacctacggcttctttttccaggtggtgagctcatgcgaatagtctgtatggccatcttccgccatttaaggttcttgtttggtatcctcccttctgatccaagggctgcagaaactacaaataatatcgctagggttgtttcatcatgtgttcgaggtatggatcttggtgcacttagtgcttgtctagcagcagtggtttgttcctcgcagcaacccccgcttcgtcccattggaagctctgcaggagatggtgcttcccttattctgaatgctgttcttgatagggcaactgaactcttaactgatcctaatgctgctagcaactacaatatgactaatcgggcactttggcaggcctcctttgatcaattctttggccttctgaccaagtattgtgtaaacaagtatgatactataatgcagtcactgctaatgcaggcctccacgaatatggccgttattggctcagatgcagccagagctattagtcgtgaaatgccagttgagctgctgcgtgcgagtcttcctcacaccgatgatcaccagagacagttgctcttagatttcacacagcggtccatgcctgtgggaggatctaacaatcacgatgggggaaatggtgcccacataaattcagagtctgtgctaagttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000290 GO:0000932 GO:0000956 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0033962 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

PAT1

Protein Analysis

822

Amino Acids

90.6

Weight (kDa)

5.66

Isoelectric Point (pI)

61.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79090 AT1G79090 AT1G79090
fragaria_vesca	FvH4_3g15840 FvH4_3g15840
malus_domestica	MD05G1219500.v1.1 MD10G1201900.v1.1
prunus_persica	Prupe.4G140400_v2.0.a1
pyrus_communis	pycom05g20090 pycom10g17270
rosa_chinensis	RchiOBHm_Chr5g0026641
rosa_laevigata	RLG00000032942
rosa_multiflora	Rmu_sc0004490.1_g000005
rosa_roxburghii	Rroxscaffold_1G00052830
rosa_rugosa	Rorug05G0094500
rosa_samantha	Rh5AG188000 Rh5BG184400 Rh5CG204300 Rh5DG186700
rosa_wichuraiana	Rw5G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	37, 568, 2435
AccI	GTMKAC	2 cut(s)	1114, 1225
AciI	CCGC	4 cut(s)	941, 1873, 2033, 2389
AcoI	YGGCCR	3 cut(s)	1178, 1863, 2268
AcsI	RAATTY	3 cut(s)	769, 1480, 2446
AcuI	CTGAAG	2 cut(s)	69, 423
AcyI	GRCGYC	2 cut(s)	38, 1663
AdeI	CACNNNGTG	1 cut(s)	1991
AfaI	GTAC	2 cut(s)	485, 1814
AfiI	CCNNNNNNNGG	6 cut(s)	602, 605, 683, 1594, 1653, 2405
AhdI	GACNNNNNGTC	1 cut(s)	789
AjnI	CCWGG	4 cut(s)	601, 787, 1587, 1831
Alw21I	GWGCWC	3 cut(s)	308, 1845, 1987
Alw26I	GTCTC	5 cut(s)	170, 238, 1005, 1783, 2356
Alw44I	GTGCAC	1 cut(s)	1983
AlwNI	CAGNNNCTG	2 cut(s)	2242, 2456
Ama87I	CYCGRG	1 cut(s)	1368
ApaLI	GTGCAC	1 cut(s)	1983
ApoI	RAATTY	3 cut(s)	769, 1480, 2446
Asp700I	GAANNNNTTC	4 cut(s)	414, 493, 561, 691
AspLEI	GCGC	2 cut(s)	40, 190
AspS9I	GGNCC	7 cut(s)	443, 674, 825, 1191, 1426, 1792, 2391
AsuC2I	CCSGG	1 cut(s)	1494
AsuHPI	GGTGA	5 cut(s)	332, 618, 687, 1850, 2348
AsuII	TTCGAA	1 cut(s)	1231
AsuNHI	GCTAGC	1 cut(s)	2132
AvaI	CYCGRG	1 cut(s)	1368
AvaII	GGWCC	5 cut(s)	443, 674, 1191, 1426, 2391
AxyI	CCTNAGG	3 cut(s)	54, 678, 1769
BaeGI	GKGCMC	4 cut(s)	1375, 1987, 2161, 2440
BalI	TGGCCA	2 cut(s)	1180, 1865
BamHI	GGATCC	1 cut(s)	329
BanI	GGYRCC	3 cut(s)	37, 568, 2435
BanII	GRGCYC	3 cut(s)	510, 1686, 1845
BarI	GAAGNNNNNNTAC	2 cut(s)	1888, 1920
BauI	CACGAG	1 cut(s)	1374
BbsI	GAAGAC	4 cut(s)	429, 785, 1574, 2330
Bbv12I	GWGCWC	3 cut(s)	308, 1845, 1987
BceAI	ACGGC	2 cut(s)	1835, 2255
BciT130I	CCWGG	4 cut(s)	603, 789, 1589, 1833
BciVI	GTATCC	1 cut(s)	1907
BclI	TGATCA	2 cut(s)	2179, 2353
BcnI	CCSGG	1 cut(s)	1494
BcoDI	GTCTC	5 cut(s)	170, 238, 1005, 1783, 2356
BfmI	CTRYAG	4 cut(s)	180, 465, 1920, 2055
BfoI	RGCGCY	1 cut(s)	41
BfuI	GTATCC	1 cut(s)	1907
BglII	AGATCT	1 cut(s)	611
Bme1390I	CCNGG	5 cut(s)	603, 789, 1494, 1589, 1833
Bme18I	GGWCC	5 cut(s)	443, 674, 1191, 1426, 2391
BmeRI	GACNNNNNGTC	1 cut(s)	789
BmeT110I	CYCGRG	1 cut(s)	1368
BmgT120I	GGNCC	7 cut(s)	443, 674, 825, 1191, 1426, 1792, 2391
BmiI	GGNNCC	9 cut(s)	39, 331, 570, 1427, 1428, 1473, 1539, 1645, 2437
BmrFI	CCNGG	5 cut(s)	603, 789, 1494, 1589, 1833
BmrI	ACTGGG	2 cut(s)	747, 1642
BmtI	GCTAGC	1 cut(s)	2136
BmuI	ACTGGG	2 cut(s)	747, 1642
BpiI	GAAGAC	4 cut(s)	429, 785, 1574, 2330
BplI	GAGNNNNNCTC	2 cut(s)	2326, 2358
BpmI	CTGGAG	1 cut(s)	585
Bpu10I	CCTNAGC	1 cut(s)	504
Bpu14I	TTCGAA	1 cut(s)	1231
BpuEI	CTTGAG	1 cut(s)	1733
BpuMI	CCSGG	1 cut(s)	1494
Bsa29I	ATCGAT	1 cut(s)	1605
BsaBI	GATNNNNATC	1 cut(s)	1605
BsaHI	GRCGYC	2 cut(s)	38, 1663
BsaJI	CCNNGG	3 cut(s)	1367, 1788, 1913
Bsc4I	CCNNNNNNNGG	6 cut(s)	602, 605, 683, 1594, 1653, 2405
Bse1I	ACTGG	7 cut(s)	313, 386, 742, 962, 1288, 1648, 2315
Bse21I	CCTNAGG	3 cut(s)	54, 678, 1769
Bse3DI	GCAATG	3 cut(s)	999, 1065, 1264
Bse8I	GATNNNNATC	1 cut(s)	1605
BseBI	CCWGG	4 cut(s)	603, 789, 1589, 1833
BseCI	ATCGAT	1 cut(s)	1605
BseDI	CCNNGG	3 cut(s)	1367, 1788, 1913
BseGI	GGATG	9 cut(s)	292, 853, 943, 958, 1028, 1576, 1597, 1603, 1759
BseJI	GATNNNNATC	1 cut(s)	1605
BseLI	CCNNNNNNNGG	6 cut(s)	602, 605, 683, 1594, 1653, 2405
BseMI	GCAATG	3 cut(s)	999, 1065, 1264
BseMII	CTCAG	8 cut(s)	68, 495, 629, 692, 1118, 1509, 1760, 2295
BseNI	ACTGG	7 cut(s)	313, 386, 742, 962, 1288, 1648, 2315
BseRI	GAGGAG	4 cut(s)	188, 212, 215, 1356
BseSI	GKGCMC	4 cut(s)	1375, 1987, 2161, 2440
BseYI	CCCAGC	1 cut(s)	1313
BsgI	GTGCAG	2 cut(s)	383, 938
Bsh1285I	CGRYCG	1 cut(s)	1609
BshNI	GGYRCC	3 cut(s)	37, 568, 2435
BshVI	ATCGAT	1 cut(s)	1605
BsiEI	CGRYCG	1 cut(s)	1609
BsiHKAI	GWGCWC	3 cut(s)	308, 1845, 1987
BsiHKCI	CYCGRG	1 cut(s)	1368
BsiSI	CCGG	1 cut(s)	1493
BslFI	GGGAC	3 cut(s)	795, 1412, 2025
BslI	CCNNNNNNNGG	6 cut(s)	602, 605, 683, 1594, 1653, 2405
BsmAI	GTCTC	5 cut(s)	170, 238, 1005, 1783, 2356
BsmFI	GGGAC	3 cut(s)	795, 1412, 2025
BsmI	GAATGC	3 cut(s)	414, 1239, 2089
BsoBI	CYCGRG	1 cut(s)	1368
Bsp119I	TTCGAA	1 cut(s)	1231
Bsp1286I	GDGCHC	8 cut(s)	308, 510, 1375, 1686, 1845, 1987, 2161, 2440
Bsp1407I	TGTACA	1 cut(s)	483
BspACI	CCGC	4 cut(s)	941, 1873, 2033, 2389
BspCNI	CTCAG	8 cut(s)	67, 496, 628, 691, 1117, 1510, 1761, 2294
BspDI	ATCGAT	1 cut(s)	1605
BspLI	GGNNCC	9 cut(s)	39, 331, 570, 1427, 1428, 1473, 1539, 1645, 2437
BspMAI	CTGCAG	3 cut(s)	184, 1924, 2059
BspOI	GCTAGC	1 cut(s)	2136
BspT104I	TTCGAA	1 cut(s)	1231
BspT107I	GGYRCC	3 cut(s)	37, 568, 2435
BsrDI	GCAATG	3 cut(s)	999, 1065, 1264
BsrGI	TGTACA	1 cut(s)	483
BsrI	ACTGG	7 cut(s)	313, 386, 742, 962, 1288, 1648, 2315
BssECI	CCNNGG	3 cut(s)	1367, 1788, 1913
BssNAI	GTATAC	1 cut(s)	1226
BssNI	GRCGYC	2 cut(s)	38, 1663
BssSI	CACGAG	1 cut(s)	1374
BssT1I	CCWWGG	2 cut(s)	1788, 1913
Bst1107I	GTATAC	1 cut(s)	1226
Bst2BI	CACGAG	1 cut(s)	1374
Bst2UI	CCWGG	4 cut(s)	603, 789, 1589, 1833
Bst4CI	ACNGT	4 cut(s)	447, 888, 918, 2367
Bst6I	CTCTTC	5 cut(s)	165, 189, 216, 1441, 1464
BstACI	GRCGYC	2 cut(s)	38, 1663
BstAPI	GCANNNNNTGC	2 cut(s)	1991, 2242
BstAUI	TGTACA	1 cut(s)	483
BstBI	TTCGAA	1 cut(s)	1231
BstEII	GGTNACC	1 cut(s)	741
BstENI	CCTNNNNNAGG	1 cut(s)	2403
BstF5I	GGATG	9 cut(s)	292, 853, 943, 958, 1028, 1576, 1597, 1603, 1759
BstH2I	RGCGCY	1 cut(s)	41
BstHHI	GCGC	2 cut(s)	40, 190
BstMAI	GTCTC	5 cut(s)	170, 238, 1005, 1783, 2356
BstMCI	CGRYCG	1 cut(s)	1609
BstNI	CCWGG	4 cut(s)	603, 789, 1589, 1833
BstNSI	RCATGY	1 cut(s)	1397
BstPI	GGTNACC	1 cut(s)	741
BstSCI	CCNGG	5 cut(s)	601, 787, 1492, 1587, 1831
BstSFI	CTRYAG	4 cut(s)	180, 465, 1920, 2055
BstSLI	GKGCMC	4 cut(s)	1375, 1987, 2161, 2440
BstV2I	GAAGAC	4 cut(s)	429, 785, 1574, 2330
BstX2I	RGATCY	6 cut(s)	58, 329, 611, 1357, 1975, 2408
BstXI	CCANNNNNNTGG	4 cut(s)	1201, 1640, 2266, 2401
BstYI	RGATCY	6 cut(s)	58, 329, 611, 1357, 1975, 2408
BstZ17I	GTATAC	1 cut(s)	1226
Bsu15I	ATCGAT	1 cut(s)	1605
Bsu36I	CCTNAGG	3 cut(s)	54, 678, 1769
BsuI	GTATCC	1 cut(s)	1907
BsuTUI	ATCGAT	1 cut(s)	1605
BtsCI	GGATG	9 cut(s)	292, 853, 943, 958, 1028, 1576, 1597, 1603, 1759
BtsI	GCAGTG	2 cut(s)	2013, 2240
BtsIMutI	CAGTG	4 cut(s)	306, 1500, 2013, 2240
CaiI	CAGNNNCTG	2 cut(s)	2242, 2456
CfoI	GCGC	2 cut(s)	40, 190
Cfr13I	GGNCC	7 cut(s)	443, 674, 825, 1191, 1426, 1792, 2391
ClaI	ATCGAT	1 cut(s)	1605
CseI	GACGC	1 cut(s)	1652
Csp6I	GTAC	2 cut(s)	484, 1813
CspCI	CAANNNNNGTGG	6 cut(s)	817, 852, 1150, 1185, 1274, 1309
CviAII	CATG	7 cut(s)	649, 749, 1139, 1394, 1846, 1959, 2395
CviQI	GTAC	2 cut(s)	484, 1813
DinI	GGCGCC	1 cut(s)	39
DraI	TTTAAA	1 cut(s)	867
DraIII	CACNNNGTG	1 cut(s)	1991
DriI	GACNNNNNGTC	1 cut(s)	789
EaeI	YGGCCR	3 cut(s)	1178, 1863, 2268
Eam1104I	CTCTTC	5 cut(s)	165, 189, 216, 1441, 1464
Eam1105I	GACNNNNNGTC	1 cut(s)	789
EarI	CTCTTC	5 cut(s)	165, 189, 216, 1441, 1464
EciI	GGCGGA	1 cut(s)	1862
Ecl136II	GAGCTC	1 cut(s)	1843
Eco130I	CCWWGG	2 cut(s)	1788, 1913
Eco147I	AGGCCT	3 cut(s)	1450, 2171, 2255
Eco24I	GRGCYC	3 cut(s)	510, 1686, 1845
Eco32I	GATATC	1 cut(s)	1603
Eco47I	GGWCC	5 cut(s)	443, 674, 1191, 1426, 2391
Eco53kI	GAGCTC	1 cut(s)	1843
Eco57I	CTGAAG	2 cut(s)	69, 423
Eco81I	CCTNAGG	3 cut(s)	54, 678, 1769
Eco88I	CYCGRG	1 cut(s)	1368
Eco91I	GGTNACC	1 cut(s)	741
EcoICRI	GAGCTC	1 cut(s)	1843
EcoNI	CCTNNNNNAGG	1 cut(s)	2403
EcoO109I	RGGNCCY	1 cut(s)	1426
EcoO65I	GGTNACC	1 cut(s)	741
EcoRII	CCWGG	4 cut(s)	601, 787, 1587, 1831
EcoRV	GATATC	1 cut(s)	1603
EcoT14I	CCWWGG	2 cut(s)	1788, 1913
EcoT22I	ATGCAT	3 cut(s)	106, 118, 927
EcoT38I	GRGCYC	3 cut(s)	510, 1686, 1845
EgeI	GGCGCC	1 cut(s)	39
EheI	GGCGCC	1 cut(s)	39
ErhI	CCWWGG	2 cut(s)	1788, 1913
FaeI	CATG	7 cut(s)	652, 752, 1142, 1397, 1849, 1962, 2398
FalI	AAGNNNNNCTT	2 cut(s)	421, 453
FaqI	GGGAC	3 cut(s)	795, 1412, 2025
FatI	CATG	7 cut(s)	648, 748, 1138, 1393, 1845, 1958, 2394
FauI	CCCGC	1 cut(s)	2040
FauNDI	CATATG	1 cut(s)	1267
FbaI	TGATCA	2 cut(s)	2179, 2353
FblI	GTMKAC	2 cut(s)	1114, 1225
FokI	GGATG	9 cut(s)	299, 840, 930, 945, 1015, 1583, 1604, 1610, 1766
FriOI	GRGCYC	3 cut(s)	510, 1686, 1845
GlaI	GCGC	2 cut(s)	39, 189
GsaI	CCCAGC	1 cut(s)	1317
GsuI	CTGGAG	1 cut(s)	585
HaeII	RGCGCY	1 cut(s)	41
HapII	CCGG	1 cut(s)	1493
HgaI	GACGC	1 cut(s)	1652
HhaI	GCGC	2 cut(s)	40, 190
Hin1I	GRCGYC	2 cut(s)	38, 1663
Hin1II	CATG	7 cut(s)	652, 752, 1142, 1397, 1849, 1962, 2398
Hin6I	GCGC	2 cut(s)	38, 188
HinP1I	GCGC	2 cut(s)	38, 188
HindIII	AAGCTT	1 cut(s)	1799
HinfI	GANTC	4 cut(s)	131, 784, 2335, 2453
HpaII	CCGG	1 cut(s)	1493
HphI	GGTGA	5 cut(s)	332, 618, 687, 1850, 2348
Hpy166II	GTNNAC	6 cut(s)	626, 674, 1115, 1226, 1985, 2215
Hpy8I	GTNNAC	6 cut(s)	626, 674, 1115, 1226, 1985, 2215
HpyAV	CCTTC	5 cut(s)	1031, 1504, 1673, 1914, 2204
HpyCH4III	ACNGT	4 cut(s)	447, 888, 918, 2367
Hsp92I	GRCGYC	2 cut(s)	38, 1663
Hsp92II	CATG	7 cut(s)	652, 752, 1142, 1397, 1849, 1962, 2398
HspAI	GCGC	2 cut(s)	38, 188
KasI	GGCGCC	1 cut(s)	37
KflI	GGGWCCC	1 cut(s)	1426
Ksp22I	TGATCA	2 cut(s)	2179, 2353
LmnI	GCTCC	4 cut(s)	303, 1471, 1537, 1635
MaeIII	GTNAC	4 cut(s)	741, 1496, 1558, 2238
MfeI	CAATTG	2 cut(s)	1563, 1700
MflI	RGATCY	6 cut(s)	58, 329, 611, 1357, 1975, 2408
MhlI	GDGCHC	8 cut(s)	308, 510, 1375, 1686, 1845, 1987, 2161, 2440
MlsI	TGGCCA	2 cut(s)	1180, 1865
MluNI	TGGCCA	2 cut(s)	1180, 1865
Mly113I	GGCGCC	1 cut(s)	38
MlyI	GAGTC	3 cut(s)	778, 2344, 2462
MmeI	TCCRAC	1 cut(s)	1367
Mox20I	TGGCCA	2 cut(s)	1180, 1865
Mph1103I	ATGCAT	3 cut(s)	106, 118, 927
MroXI	GAANNNNTTC	4 cut(s)	414, 493, 561, 691
MscI	TGGCCA	2 cut(s)	1180, 1865
MseI	TTAA	8 cut(s)	78, 263, 801, 866, 1011, 1352, 1880, 2114
MslI	CAYNNNNRTG	6 cut(s)	762, 900, 1257, 2264, 2349, 2399
Msp20I	TGGCCA	2 cut(s)	1180, 1865
MspA1I	CMGCKG	3 cut(s)	517, 1208, 2389
MspI	CCGG	1 cut(s)	1493
MspR9I	CCNGG	5 cut(s)	603, 789, 1494, 1589, 1833
MunI	CAATTG	2 cut(s)	1563, 1700
Mva1269I	GAATGC	3 cut(s)	414, 1239, 2089
MvaI	CCWGG	4 cut(s)	603, 789, 1589, 1833
NarI	GGCGCC	1 cut(s)	38
NciI	CCSGG	1 cut(s)	1494
NdeI	CATATG	1 cut(s)	1267
NheI	GCTAGC	1 cut(s)	2132
NlaIII	CATG	7 cut(s)	652, 752, 1142, 1397, 1849, 1962, 2398
NlaIV	GGNNCC	9 cut(s)	39, 331, 570, 1427, 1428, 1473, 1539, 1645, 2437
NmuCI	GTSAC	1 cut(s)	2238
NsiI	ATGCAT	3 cut(s)	106, 118, 927
NspI	RCATGY	1 cut(s)	1397
NspV	TTCGAA	1 cut(s)	1231
PceI	AGGCCT	3 cut(s)	1450, 2171, 2255
PctI	GAATGC	3 cut(s)	414, 1239, 2089
PdmI	GAANNNNTTC	4 cut(s)	414, 493, 561, 691
PfeI	GAWTC	1 cut(s)	131
PflFI	GACNNNGTC	1 cut(s)	1578
PfoI	TCCNGGA	1 cut(s)	1587
Ple19I	CGATCG	1 cut(s)	1609
PleI	GAGTC	3 cut(s)	778, 2343, 2461
PluTI	GGCGCC	1 cut(s)	41
PpsI	GAGTC	3 cut(s)	778, 2343, 2461
PpuMI	RGGWCCY	1 cut(s)	1426
Psp124BI	GAGCTC	1 cut(s)	1845
Psp5II	RGGWCCY	1 cut(s)	1426
Psp6I	CCWGG	4 cut(s)	601, 787, 1587, 1831
PspEI	GGTNACC	1 cut(s)	741
PspFI	CCCAGC	1 cut(s)	1313
PspGI	CCWGG	4 cut(s)	601, 787, 1587, 1831
PspN4I	GGNNCC	9 cut(s)	39, 331, 570, 1427, 1428, 1473, 1539, 1645, 2437
PspPI	GGNCC	7 cut(s)	443, 674, 825, 1191, 1426, 1792, 2391
PspPPI	RGGWCCY	1 cut(s)	1426
PstI	CTGCAG	3 cut(s)	184, 1924, 2059
PstNI	CAGNNNCTG	2 cut(s)	2242, 2456
PsuI	RGATCY	6 cut(s)	58, 329, 611, 1357, 1975, 2408
PsyI	GACNNNGTC	1 cut(s)	1578
PvuI	CGATCG	1 cut(s)	1609
PvuII	CAGCTG	2 cut(s)	517, 1208
RsaI	GTAC	2 cut(s)	485, 1814
RsaNI	GTAC	2 cut(s)	484, 1813
RseI	CAYNNNNRTG	6 cut(s)	762, 900, 1257, 2264, 2349, 2399
SacI	GAGCTC	1 cut(s)	1845
SaqAI	TTAA	8 cut(s)	78, 263, 801, 866, 1011, 1352, 1880, 2114
Sau96I	GGNCC	7 cut(s)	443, 674, 825, 1191, 1426, 1792, 2391
SchI	GAGTC	3 cut(s)	778, 2344, 2462
ScrFI	CCNGG	5 cut(s)	603, 789, 1494, 1589, 1833
SduI	GDGCHC	8 cut(s)	308, 510, 1375, 1686, 1845, 1987, 2161, 2440
SfcI	CTRYAG	4 cut(s)	180, 465, 1920, 2055
SfoI	GGCGCC	1 cut(s)	39
SfuI	TTCGAA	1 cut(s)	1231
SinI	GGWCC	5 cut(s)	443, 674, 1191, 1426, 2391
SmiI	ATTTAAAT	1 cut(s)	867
SmiMI	CAYNNNNRTG	6 cut(s)	762, 900, 1257, 2264, 2349, 2399
SmlI	CTYRAG	1 cut(s)	1748
SmoI	CTYRAG	1 cut(s)	1748
SseBI	AGGCCT	3 cut(s)	1450, 2171, 2255
SsiI	CCGC	4 cut(s)	941, 1873, 2033, 2389
SspDI	GGCGCC	1 cut(s)	37
SspI	AATATT	2 cut(s)	399, 545
SstI	GAGCTC	1 cut(s)	1845
StuI	AGGCCT	3 cut(s)	1450, 2171, 2255
StyD4I	CCNGG	5 cut(s)	601, 787, 1492, 1587, 1831
StyI	CCWWGG	2 cut(s)	1788, 1913
SwaI	ATTTAAAT	1 cut(s)	867
TaaI	ACNGT	4 cut(s)	447, 888, 918, 2367
TaqI	TCGA	4 cut(s)	99, 1231, 1605, 1966
TatI	WGTACW	1 cut(s)	483
TauI	GCSGC	1 cut(s)	943
TfiI	GAWTC	1 cut(s)	131
Tru1I	TTAA	8 cut(s)	78, 263, 801, 866, 1011, 1352, 1880, 2114
Tru9I	TTAA	8 cut(s)	78, 263, 801, 866, 1011, 1352, 1880, 2114
TscAI	CASTG	4 cut(s)	313, 1507, 2013, 2247
TseFI	GTSAC	1 cut(s)	2238
Tsp45I	GTSAC	1 cut(s)	2238
TspRI	CASTG	4 cut(s)	313, 1507, 2013, 2247
Tth111I	GACNNNGTC	1 cut(s)	1578
VneI	GTGCAC	1 cut(s)	1983
VpaK11BI	GGWCC	5 cut(s)	443, 674, 1191, 1426, 2391
XagI	CCTNNNNNAGG	1 cut(s)	2403
XapI	RAATTY	3 cut(s)	769, 1480, 2446
XbaI	TCTAGA	1 cut(s)	1528
XceI	RCATGY	1 cut(s)	1397
XmiI	GTMKAC	2 cut(s)	1114, 1225
XmnI	GAANNNNTTC	4 cut(s)	414, 493, 561, 691
Zsp2I	ATGCAT	3 cut(s)	106, 118, 927

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.