Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0011339

Physical Location & Seq

Genomic Coordinates Forward (+)

21226039 .. 21232049

Gene Structure 6011 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032942

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGGAACAGTGTGGAGAGTTGGATGTCAAGAGCGAGGTATTCGATGCATCACAATATGCATTTTTTGGTCAAGATTCTGTTGAGGAAGTTGAGTTGGGAGGTTTAGAAGATGAAGAAGAGACTGCAGTTGCGCTTGAAGAGGAGGAGTTTCTATATAACAAAGAAGAGGGTGGTGTCTCTCTATCTGATGCTGATGATCTGTCTTTAACTTTTGAAAAGTTGAACAAGGATGTAAATGGAACTAGGAGCACTGGAATAATTGGTGATAGAGGATCCAGAGAAAGTTCATCTGTTGCTGAATGGGTGCAGGAAAGTTTCCCTAACTGGATTGATGAAGAAATATTTGATGCTGAAAGCATTCAAGATGGGAAAAGATGGTCTTCAGGACCGTTTTCATCTATTCGTCCTACAGAAGCAAAGCCTTTGTACAGAACTTCTTCATATCCTGAGCCCCCACAGCTGCCACAGCAGCAGCAACAACAACATCAATTTTATTCTAGCGAACCAATTCTGGTGCCAAAATCTTCTTTTACTTCATATCCACCTCCAGGTGGTAGATCTCAGCAGGGTTCACCTAACCACCTATCAGGCCACATGAATATTCCTTATGCTGCTGGTGGACCTCAGGGGGGGATATCTTCACCAAACCTTTCTCCCTACTCTAACTCTCCACTTCAAATGACTGGGTTACCTCATGGATCACATTTTGGTGGAAATTTGCCTCATCTGACTCCTGGTCTTCCTGTTAATACTCGTCCCCTTACTCAATGGGCCAACCAAAGTGGCTCATTTGGAGATCATCCTAGTCATTTAAATAATCTGTTGCAGCAACAGTTATCTCATCAGAATGGTTTGCCTCCACAGTTGATGCATCAGCCACAGCAGCCGCATCCTAGAATGCACCATCCAGTTCAGCAACCATTCAGCCATATGTCAGCAATGCAGTCTCAACTATTTAACCCCCACCTTCCTCCATCCCCACCCTTGATGAACAAGTTTGAAGCAATGTTCGGTATGAGTGATATTAGAGATGAAAGGTCAAGATTAGCTCAGAAAGGTAGACAGAATATGCGTTTTTCTCAACATGGCTTTGATACAGGTAGCTACAAAAGTGGTGGTGGGTGGCCATCATATAGGTCCAAGTATATGACAGCTGATGAAATTGAGGGTATACTTCGAATGCAGCTTGCTGCAACACACAGCAATGATCCATATGTAGATGATTATTACCACCAGTATTGCCTTGCAAGAAAATCTGCTGGGGCGAAGTTGAAACATCATTTCTGTCCAACTCATTTAAGGGATCTTCCTCCTCGGGCACGAGCTAATACTGAACCACATGCTTTTCTCCAAGTTGATGCTCTTGGGAGGGTCCCATTCTCTTCAATACGCAGGCCTCGCCCTCTTCTTGAAGTGGAGCCACCAAATTCATCTAGTCCGGGCAACACTGAACAGAAGGTTTCTGAGAAGCCTCTAGAACAGGAACCAATGCTTGCTGCTAGGGTTACAATTGAGGATGGACTTTGTCTTCTCCTGGATGTGGATGATATTGATCGTTTTTTACAATTCAATCAGCTCCAAGATGGTGGAACCCAGTTGAGGCATAGGCGTCAGGGCTTGCTAGACGGGCTCGCAGCATCTCTACAATTGGTTGATCCACTTGGGAAAAATGACCACACAGATGGGCTTGCTCTCAAGGATGATCTTGTGTTCCTGAGGTTAGTCTCTCTACCCAAGGGCCGAAAGCTTCTTGCCAAGTACCTACAGCTTCTTTTTCCAGGTGGTGAGCTCATGCGAATAGTCTGTATGGCCATCTTCCGCCATTTGAGGTTCTTGTTTGGTATCCTCCCTTCTGATCCAAGGGCTGCAGAAACTACAAATAATATCGCTAGAGTTGTTTCATCATGTGTTCGAGGTATGGACCTTGGTGCACTTAGTGCTTGTCTAGCAGCAGTGGTTTGTTCCTCGGAGCAACCCCCGCTTCGTCCCATTGGAAGCTCTGCAGGAGATGGTGCTTCCCGTATTCTGAATGCTGTTCTTGATAGGGCAACTGAACTCTTAACTGATCCTAATGCTGCTAGCAACTACAATATGACTAATCGGGCACTTTGGCAGGCCTCCTTTGATCAATTCTTTGGCCTTCTGACCAAGTATTGTGTAAACAAGTATGATACTATAATGCAGTCACTGCTAATGCAGGCCCCCACGAATATGGCTGTTATTGGCTCAGATGCAGCCAGAGCTATTAGTCGTGAAATGCCAGTTGAGCTGCTGCGTGCGAGTCTTCCTCACACCGATGATCACCAGAGACAGCTGCTCTTAGATTTCACGCAGCGGTCCATGCCTGTGGGAGGATCTAACAATCACGATGGGGGAAATGGTGCCCACATAAATTCAGAGTCTGTGCTAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000290 GO:0000932 GO:0000956 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0033962 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

PAT1

Protein Analysis

805

Amino Acids

88.86

Weight (kDa)

5.72

Isoelectric Point (pI)

61.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79090 AT1G79090 AT1G79090
fragaria_vesca	FvH4_3g15840 FvH4_3g15840
malus_domestica	MD05G1219500.v1.1 MD10G1201900.v1.1
prunus_persica	Prupe.4G140400_v2.0.a1
pyrus_communis	pycom05g20090 pycom10g17270
rosa_chinensis	RchiOBHm_Chr5g0026641
rosa_laevigata	RLG00000032942
rosa_multiflora	Rmu_sc0004490.1_g000005
rosa_roxburghii	Rroxscaffold_1G00052830
rosa_rugosa	Rorug05G0094500
rosa_samantha	Rh5AG188000 Rh5BG184400 Rh5CG204300 Rh5DG186700
rosa_wichuraiana	Rw5G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	514, 2381
AccI	GTMKAC	2 cut(s)	1060, 1171
AciI	CCGC	4 cut(s)	887, 1819, 1979, 2335
AclWI	GGATC	9 cut(s)	267, 280, 706, 1202, 1311, 1649, 1850, 2060, 2362
AcoI	YGGCCR	2 cut(s)	1124, 1809
AcsI	RAATTY	3 cut(s)	715, 1426, 2392
AcuI	CTGAAG	1 cut(s)	366
AcyI	GRCGYC	1 cut(s)	1609
AdeI	CACNNNGTG	1 cut(s)	1937
AfaI	GTAC	2 cut(s)	428, 1760
AfiI	CCNNNNNNNGG	6 cut(s)	548, 551, 629, 1540, 1599, 2351
AhdI	GACNNNNNGTC	1 cut(s)	735
AjnI	CCWGG	4 cut(s)	547, 733, 1533, 1777
Alw21I	GWGCWC	3 cut(s)	251, 1791, 1933
Alw26I	GTCTC	5 cut(s)	113, 181, 951, 1729, 2302
Alw44I	GTGCAC	1 cut(s)	1929
AlwI	GGATC	9 cut(s)	267, 280, 706, 1202, 1311, 1649, 1850, 2060, 2362
AlwNI	CAGNNNCTG	2 cut(s)	2188, 2402
Ama87I	CYCGRG	1 cut(s)	1314
AoxI	GGCC	9 cut(s)	589, 771, 1124, 1394, 1738, 1809, 2115, 2137, 2199
ApaLI	GTGCAC	1 cut(s)	1929
ApoI	RAATTY	3 cut(s)	715, 1426, 2392
Asp700I	GAANNNNTTC	3 cut(s)	357, 436, 507
AspLEI	GCGC	1 cut(s)	133
AspS9I	GGNCC	9 cut(s)	386, 620, 771, 1137, 1372, 1738, 1921, 2200, 2337
AsuC2I	CCSGG	1 cut(s)	1440
AsuHPI	GGTGA	5 cut(s)	275, 564, 633, 1796, 2294
AsuII	TTCGAA	1 cut(s)	1177
AsuNHI	GCTAGC	1 cut(s)	2078
AvaI	CYCGRG	1 cut(s)	1314
AvaII	GGWCC	6 cut(s)	386, 620, 1137, 1372, 1921, 2337
AxyI	CCTNAGG	2 cut(s)	624, 1715
BaeGI	GKGCMC	4 cut(s)	1321, 1933, 2107, 2386
BalI	TGGCCA	2 cut(s)	1126, 1811
BamHI	GGATCC	1 cut(s)	272
BanI	GGYRCC	2 cut(s)	514, 2381
BanII	GRGCYC	3 cut(s)	453, 1632, 1791
BarI	GAAGNNNNNNTAC	2 cut(s)	1834, 1866
BauI	CACGAG	1 cut(s)	1320
BbsI	GAAGAC	4 cut(s)	372, 731, 1520, 2276
Bbv12I	GWGCWC	3 cut(s)	251, 1791, 1933
BciT130I	CCWGG	4 cut(s)	549, 735, 1535, 1779
BciVI	GTATCC	1 cut(s)	1853
BclI	TGATCA	2 cut(s)	2125, 2299
BcnI	CCSGG	1 cut(s)	1440
BcoDI	GTCTC	5 cut(s)	113, 181, 951, 1729, 2302
BfmI	CTRYAG	5 cut(s)	123, 408, 1763, 1866, 2001
BfuI	GTATCC	1 cut(s)	1853
BglII	AGATCT	1 cut(s)	557
Bme1390I	CCNGG	5 cut(s)	549, 735, 1440, 1535, 1779
Bme18I	GGWCC	6 cut(s)	386, 620, 1137, 1372, 1921, 2337
BmeRI	GACNNNNNGTC	1 cut(s)	735
BmeT110I	CYCGRG	1 cut(s)	1314
BmgT120I	GGNCC	9 cut(s)	386, 620, 771, 1137, 1372, 1738, 1921, 2200, 2337
BmiI	GGNNCC	9 cut(s)	274, 516, 1373, 1374, 1419, 1485, 1591, 2202, 2383
BmrFI	CCNGG	5 cut(s)	549, 735, 1440, 1535, 1779
BmrI	ACTGGG	2 cut(s)	693, 1588
BmtI	GCTAGC	1 cut(s)	2082
BmuI	ACTGGG	2 cut(s)	693, 1588
BpiI	GAAGAC	4 cut(s)	372, 731, 1520, 2276
BplI	GAGNNNNNCTC	2 cut(s)	2272, 2304
BpmI	CTGGAG	1 cut(s)	531
Bpu10I	CCTNAGC	1 cut(s)	447
Bpu14I	TTCGAA	1 cut(s)	1177
BpuEI	CTTGAG	1 cut(s)	1679
BpuMI	CCSGG	1 cut(s)	1440
BsaBI	GATNNNNATC	1 cut(s)	1551
BsaHI	GRCGYC	1 cut(s)	1609
BsaJI	CCNNGG	5 cut(s)	1313, 1734, 1859, 1924, 1965
Bsc4I	CCNNNNNNNGG	6 cut(s)	548, 551, 629, 1540, 1599, 2351
Bse1I	ACTGG	7 cut(s)	256, 329, 688, 908, 1234, 1594, 2261
Bse21I	CCTNAGG	2 cut(s)	624, 1715
Bse3DI	GCAATG	3 cut(s)	945, 1011, 1210
Bse8I	GATNNNNATC	1 cut(s)	1551
BseBI	CCWGG	4 cut(s)	549, 735, 1535, 1779
BseDI	CCNNGG	5 cut(s)	1313, 1734, 1859, 1924, 1965
BseJI	GATNNNNATC	1 cut(s)	1551
BseLI	CCNNNNNNNGG	6 cut(s)	548, 551, 629, 1540, 1599, 2351
BseMI	GCAATG	3 cut(s)	945, 1011, 1210
BseMII	CTCAG	7 cut(s)	438, 575, 638, 1064, 1455, 1706, 2241
BseNI	ACTGG	7 cut(s)	256, 329, 688, 908, 1234, 1594, 2261
BseRI	GAGGAG	3 cut(s)	155, 158, 1302
BseSI	GKGCMC	4 cut(s)	1321, 1933, 2107, 2386
BseYI	CCCAGC	1 cut(s)	1259
BsgI	GTGCAG	1 cut(s)	326
BshFI	GGCC	9 cut(s)	591, 773, 1126, 1396, 1740, 1811, 2117, 2139, 2201
BshNI	GGYRCC	2 cut(s)	514, 2381
BsiHKAI	GWGCWC	3 cut(s)	251, 1791, 1933
BsiHKCI	CYCGRG	1 cut(s)	1314
BsiSI	CCGG	1 cut(s)	1439
BslFI	GGGAC	3 cut(s)	741, 1358, 1971
BslI	CCNNNNNNNGG	6 cut(s)	548, 551, 629, 1540, 1599, 2351
BsmAI	GTCTC	5 cut(s)	113, 181, 951, 1729, 2302
BsmFI	GGGAC	3 cut(s)	741, 1358, 1971
BsmI	GAATGC	4 cut(s)	357, 903, 1185, 2035
BsnI	GGCC	9 cut(s)	591, 773, 1126, 1396, 1740, 1811, 2117, 2139, 2201
BsoBI	CYCGRG	1 cut(s)	1314
Bsp119I	TTCGAA	1 cut(s)	1177
Bsp1286I	GDGCHC	8 cut(s)	251, 453, 1321, 1632, 1791, 1933, 2107, 2386
Bsp1407I	TGTACA	1 cut(s)	426
BspACI	CCGC	4 cut(s)	887, 1819, 1979, 2335
BspANI	GGCC	9 cut(s)	591, 773, 1126, 1396, 1740, 1811, 2117, 2139, 2201
BspCNI	CTCAG	7 cut(s)	439, 574, 637, 1063, 1456, 1707, 2240
BspLI	GGNNCC	9 cut(s)	274, 516, 1373, 1374, 1419, 1485, 1591, 2202, 2383
BspMAI	CTGCAG	3 cut(s)	127, 1870, 2005
BspOI	GCTAGC	1 cut(s)	2082
BspPI	GGATC	9 cut(s)	267, 280, 706, 1202, 1311, 1649, 1850, 2060, 2362
BspT104I	TTCGAA	1 cut(s)	1177
BspT107I	GGYRCC	2 cut(s)	514, 2381
BsrDI	GCAATG	3 cut(s)	945, 1011, 1210
BsrGI	TGTACA	1 cut(s)	426
BsrI	ACTGG	7 cut(s)	256, 329, 688, 908, 1234, 1594, 2261
BssECI	CCNNGG	5 cut(s)	1313, 1734, 1859, 1924, 1965
BssNAI	GTATAC	1 cut(s)	1172
BssNI	GRCGYC	1 cut(s)	1609
BssSI	CACGAG	1 cut(s)	1320
BssT1I	CCWWGG	3 cut(s)	1734, 1859, 1924
Bst1107I	GTATAC	1 cut(s)	1172
Bst2BI	CACGAG	1 cut(s)	1320
Bst2UI	CCWGG	4 cut(s)	549, 735, 1535, 1779
Bst4CI	ACNGT	4 cut(s)	9, 390, 834, 864
Bst6I	CTCTTC	5 cut(s)	111, 132, 159, 1387, 1410
BstACI	GRCGYC	1 cut(s)	1609
BstAPI	GCANNNNNTGC	2 cut(s)	1937, 2188
BstAUI	TGTACA	1 cut(s)	426
BstBI	TTCGAA	1 cut(s)	1177
BstEII	GGTNACC	1 cut(s)	687
BstENI	CCTNNNNNAGG	1 cut(s)	2349
BstHHI	GCGC	1 cut(s)	133
BstMAI	GTCTC	5 cut(s)	113, 181, 951, 1729, 2302
BstNI	CCWGG	4 cut(s)	549, 735, 1535, 1779
BstNSI	RCATGY	1 cut(s)	1343
BstPI	GGTNACC	1 cut(s)	687
BstSCI	CCNGG	5 cut(s)	547, 733, 1438, 1533, 1777
BstSFI	CTRYAG	5 cut(s)	123, 408, 1763, 1866, 2001
BstSLI	GKGCMC	4 cut(s)	1321, 1933, 2107, 2386
BstV2I	GAAGAC	4 cut(s)	372, 731, 1520, 2276
BstX2I	RGATCY	4 cut(s)	272, 557, 1303, 2354
BstXI	CCANNNNNNTGG	4 cut(s)	1586, 1682, 2212, 2347
BstYI	RGATCY	4 cut(s)	272, 557, 1303, 2354
BstZ17I	GTATAC	1 cut(s)	1172
Bsu36I	CCTNAGG	2 cut(s)	624, 1715
BsuI	GTATCC	1 cut(s)	1853
BsuRI	GGCC	9 cut(s)	591, 773, 1126, 1396, 1740, 1811, 2117, 2139, 2201
BtsI	GCAGTG	2 cut(s)	1959, 2186
BtsIMutI	CAGTG	5 cut(s)	14, 249, 1446, 1959, 2186
CaiI	CAGNNNCTG	2 cut(s)	2188, 2402
CfoI	GCGC	1 cut(s)	133
Cfr13I	GGNCC	9 cut(s)	386, 620, 771, 1137, 1372, 1738, 1921, 2200, 2337
CseI	GACGC	1 cut(s)	1598
Csp6I	GTAC	2 cut(s)	427, 1759
CspCI	CAANNNNNGTGG	6 cut(s)	763, 798, 1096, 1131, 1220, 1255
CviAII	CATG	7 cut(s)	595, 695, 1085, 1340, 1792, 1905, 2341
CviQI	GTAC	2 cut(s)	427, 1759
DraI	TTTAAA	1 cut(s)	813
DraIII	CACNNNGTG	1 cut(s)	1937
DriI	GACNNNNNGTC	1 cut(s)	735
EaeI	YGGCCR	2 cut(s)	1124, 1809
Eam1104I	CTCTTC	5 cut(s)	111, 132, 159, 1387, 1410
Eam1105I	GACNNNNNGTC	1 cut(s)	735
EarI	CTCTTC	5 cut(s)	111, 132, 159, 1387, 1410
EciI	GGCGGA	1 cut(s)	1808
Ecl136II	GAGCTC	1 cut(s)	1789
Eco130I	CCWWGG	3 cut(s)	1734, 1859, 1924
Eco147I	AGGCCT	2 cut(s)	1396, 2117
Eco24I	GRGCYC	3 cut(s)	453, 1632, 1791
Eco32I	GATATC	1 cut(s)	636
Eco47I	GGWCC	6 cut(s)	386, 620, 1137, 1372, 1921, 2337
Eco53kI	GAGCTC	1 cut(s)	1789
Eco57I	CTGAAG	1 cut(s)	366
Eco81I	CCTNAGG	2 cut(s)	624, 1715
Eco88I	CYCGRG	1 cut(s)	1314
Eco91I	GGTNACC	1 cut(s)	687
EcoICRI	GAGCTC	1 cut(s)	1789
EcoNI	CCTNNNNNAGG	1 cut(s)	2349
EcoO109I	RGGNCCY	2 cut(s)	1372, 2200
EcoO65I	GGTNACC	1 cut(s)	687
EcoRII	CCWGG	4 cut(s)	547, 733, 1533, 1777
EcoRV	GATATC	1 cut(s)	636
EcoT14I	CCWWGG	3 cut(s)	1734, 1859, 1924
EcoT22I	ATGCAT	3 cut(s)	49, 61, 873
EcoT38I	GRGCYC	3 cut(s)	453, 1632, 1791
ErhI	CCWWGG	3 cut(s)	1734, 1859, 1924
FaeI	CATG	7 cut(s)	598, 698, 1088, 1343, 1795, 1908, 2344
FalI	AAGNNNNNCTT	2 cut(s)	364, 396
FaqI	GGGAC	3 cut(s)	741, 1358, 1971
FatI	CATG	7 cut(s)	594, 694, 1084, 1339, 1791, 1904, 2340
FauI	CCCGC	1 cut(s)	1986
FauNDI	CATATG	2 cut(s)	930, 1213
FbaI	TGATCA	2 cut(s)	2125, 2299
FblI	GTMKAC	2 cut(s)	1060, 1171
FriOI	GRGCYC	3 cut(s)	453, 1632, 1791
GlaI	GCGC	1 cut(s)	132
GsaI	CCCAGC	1 cut(s)	1263
GsuI	CTGGAG	1 cut(s)	531
HaeIII	GGCC	9 cut(s)	591, 773, 1126, 1396, 1740, 1811, 2117, 2139, 2201
HapII	CCGG	1 cut(s)	1439
HgaI	GACGC	1 cut(s)	1598
HhaI	GCGC	1 cut(s)	133
Hin1I	GRCGYC	1 cut(s)	1609
Hin1II	CATG	7 cut(s)	598, 698, 1088, 1343, 1795, 1908, 2344
Hin6I	GCGC	1 cut(s)	131
HinP1I	GCGC	1 cut(s)	131
HindIII	AAGCTT	1 cut(s)	1745
HinfI	GANTC	4 cut(s)	74, 730, 2281, 2399
HpaII	CCGG	1 cut(s)	1439
HphI	GGTGA	5 cut(s)	275, 564, 633, 1796, 2294
Hpy166II	GTNNAC	6 cut(s)	572, 620, 1061, 1172, 1931, 2161
Hpy8I	GTNNAC	6 cut(s)	572, 620, 1061, 1172, 1931, 2161
HpyAV	CCTTC	4 cut(s)	977, 1450, 1860, 2150
HpyCH4III	ACNGT	4 cut(s)	9, 390, 834, 864
Hsp92I	GRCGYC	1 cut(s)	1609
Hsp92II	CATG	7 cut(s)	598, 698, 1088, 1343, 1795, 1908, 2344
HspAI	GCGC	1 cut(s)	131
KflI	GGGWCCC	1 cut(s)	1372
Ksp22I	TGATCA	2 cut(s)	2125, 2299
LmnI	GCTCC	4 cut(s)	246, 1417, 1581, 1969
MaeIII	GTNAC	3 cut(s)	687, 1504, 2184
MfeI	CAATTG	2 cut(s)	1509, 1646
MflI	RGATCY	4 cut(s)	272, 557, 1303, 2354
MhlI	GDGCHC	8 cut(s)	251, 453, 1321, 1632, 1791, 1933, 2107, 2386
MlsI	TGGCCA	2 cut(s)	1126, 1811
MluNI	TGGCCA	2 cut(s)	1126, 1811
MlyI	GAGTC	3 cut(s)	724, 2290, 2408
MmeI	TCCRAC	1 cut(s)	1313
Mox20I	TGGCCA	2 cut(s)	1126, 1811
Mph1103I	ATGCAT	3 cut(s)	49, 61, 873
MroXI	GAANNNNTTC	3 cut(s)	357, 436, 507
MscI	TGGCCA	2 cut(s)	1126, 1811
MseI	TTAA	6 cut(s)	206, 747, 812, 957, 1298, 2060
MslI	CAYNNNNRTG	7 cut(s)	708, 846, 1203, 1680, 2210, 2295, 2345
Msp20I	TGGCCA	2 cut(s)	1126, 1811
MspA1I	CMGCKG	4 cut(s)	460, 1154, 2314, 2335
MspI	CCGG	1 cut(s)	1439
MspR9I	CCNGG	5 cut(s)	549, 735, 1440, 1535, 1779
MunI	CAATTG	2 cut(s)	1509, 1646
Mva1269I	GAATGC	4 cut(s)	357, 903, 1185, 2035
MvaI	CCWGG	4 cut(s)	549, 735, 1535, 1779
NciI	CCSGG	1 cut(s)	1440
NdeI	CATATG	2 cut(s)	930, 1213
NheI	GCTAGC	1 cut(s)	2078
NlaIII	CATG	7 cut(s)	598, 698, 1088, 1343, 1795, 1908, 2344
NlaIV	GGNNCC	9 cut(s)	274, 516, 1373, 1374, 1419, 1485, 1591, 2202, 2383
NmuCI	GTSAC	1 cut(s)	2184
NsiI	ATGCAT	3 cut(s)	49, 61, 873
NspI	RCATGY	1 cut(s)	1343
NspV	TTCGAA	1 cut(s)	1177
PceI	AGGCCT	2 cut(s)	1396, 2117
PctI	GAATGC	4 cut(s)	357, 903, 1185, 2035
PdmI	GAANNNNTTC	3 cut(s)	357, 436, 507
PfeI	GAWTC	1 cut(s)	74
PflFI	GACNNNGTC	1 cut(s)	1524
PfoI	TCCNGGA	1 cut(s)	1533
PleI	GAGTC	3 cut(s)	724, 2289, 2407
PpsI	GAGTC	3 cut(s)	724, 2289, 2407
PpuMI	RGGWCCY	1 cut(s)	1372
Psp124BI	GAGCTC	1 cut(s)	1791
Psp5II	RGGWCCY	1 cut(s)	1372
Psp6I	CCWGG	4 cut(s)	547, 733, 1533, 1777
PspEI	GGTNACC	1 cut(s)	687
PspFI	CCCAGC	1 cut(s)	1259
PspGI	CCWGG	4 cut(s)	547, 733, 1533, 1777
PspN4I	GGNNCC	9 cut(s)	274, 516, 1373, 1374, 1419, 1485, 1591, 2202, 2383
PspPI	GGNCC	9 cut(s)	386, 620, 771, 1137, 1372, 1738, 1921, 2200, 2337
PspPPI	RGGWCCY	1 cut(s)	1372
PstI	CTGCAG	3 cut(s)	127, 1870, 2005
PstNI	CAGNNNCTG	2 cut(s)	2188, 2402
PsuI	RGATCY	4 cut(s)	272, 557, 1303, 2354
PsyI	GACNNNGTC	1 cut(s)	1524
PvuII	CAGCTG	3 cut(s)	460, 1154, 2314
RsaI	GTAC	2 cut(s)	428, 1760
RsaNI	GTAC	2 cut(s)	427, 1759
RseI	CAYNNNNRTG	7 cut(s)	708, 846, 1203, 1680, 2210, 2295, 2345
SacI	GAGCTC	1 cut(s)	1791
SaqAI	TTAA	6 cut(s)	206, 747, 812, 957, 1298, 2060
Sau96I	GGNCC	9 cut(s)	386, 620, 771, 1137, 1372, 1738, 1921, 2200, 2337
SchI	GAGTC	3 cut(s)	724, 2290, 2408
ScrFI	CCNGG	5 cut(s)	549, 735, 1440, 1535, 1779
SduI	GDGCHC	8 cut(s)	251, 453, 1321, 1632, 1791, 1933, 2107, 2386
SfcI	CTRYAG	5 cut(s)	123, 408, 1763, 1866, 2001
SfuI	TTCGAA	1 cut(s)	1177
SinI	GGWCC	6 cut(s)	386, 620, 1137, 1372, 1921, 2337
SmiI	ATTTAAAT	1 cut(s)	813
SmiMI	CAYNNNNRTG	7 cut(s)	708, 846, 1203, 1680, 2210, 2295, 2345
SmlI	CTYRAG	1 cut(s)	1694
SmoI	CTYRAG	1 cut(s)	1694
SseBI	AGGCCT	2 cut(s)	1396, 2117
SsiI	CCGC	4 cut(s)	887, 1819, 1979, 2335
SspI	AATATT	2 cut(s)	342, 601
SstI	GAGCTC	1 cut(s)	1791
StuI	AGGCCT	2 cut(s)	1396, 2117
StyD4I	CCNGG	5 cut(s)	547, 733, 1438, 1533, 1777
StyI	CCWWGG	3 cut(s)	1734, 1859, 1924
SwaI	ATTTAAAT	1 cut(s)	813
TaaI	ACNGT	4 cut(s)	9, 390, 834, 864
TaqI	TCGA	3 cut(s)	42, 1177, 1912
TatI	WGTACW	1 cut(s)	426
TauI	GCSGC	1 cut(s)	889
TfiI	GAWTC	1 cut(s)	74
Tru1I	TTAA	6 cut(s)	206, 747, 812, 957, 1298, 2060
Tru9I	TTAA	6 cut(s)	206, 747, 812, 957, 1298, 2060
TscAI	CASTG	5 cut(s)	14, 256, 1453, 1959, 2193
TseFI	GTSAC	1 cut(s)	2184
Tsp45I	GTSAC	1 cut(s)	2184
TspRI	CASTG	5 cut(s)	14, 256, 1453, 1959, 2193
Tth111I	GACNNNGTC	1 cut(s)	1524
VneI	GTGCAC	1 cut(s)	1929
VpaK11BI	GGWCC	6 cut(s)	386, 620, 1137, 1372, 1921, 2337
XagI	CCTNNNNNAGG	1 cut(s)	2349
XapI	RAATTY	3 cut(s)	715, 1426, 2392
XbaI	TCTAGA	1 cut(s)	1474
XceI	RCATGY	1 cut(s)	1343
XmiI	GTMKAC	2 cut(s)	1060, 1171
XmnI	GAANNNNTTC	3 cut(s)	357, 436, 507
Zsp2I	ATGCAT	3 cut(s)	49, 61, 873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.