Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0011339

Physical Location & Seq

Genomic Coordinates Forward (+)

20579278 .. 20585802

Gene Structure 6525 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG204300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

ATGAACAACTCCACCCAACCCACTTCACAGATCTTCTCAGCGTTCTCTGTTTATGCGGCAGGCGAGGTATTCGATGCATCACAGTATGCATTTTTTGGTCAAGATTCTGTTGAGGAAGTTGAGTTGGGAGGTTTAGAAGATGAAGAGGAGACTGCAGTTGCGCTTGAAGAGGAGGAGTTTCTATATAACAAAGAAGAGGGTGGTGTCTCTCTATCTGATGCTGATGATCTGTCTTTAACTTTTGAAAAGTTGAACAAGGATGTAAATGGAACTAGGAGCACTGGAATAATTGGTGATAGAGGATCCAGAGAAAGTTCATCTGCTGCTGAATGGGTGCAGGAAAGTTTCCCTAACTGGATTGATGAAGAAATATTTGATGCTGAAAGCATTCAAGATGGGAAAAGATGGTCTTCAGGACCGTTTTCTTCTATTCGTCCTACAGAAGCAAAACCTTTGTACAGAACTTCTTCATATCCTGAGCCCCCACAGCTGCCACAGCAGCAGCAACAACAACATCAATATTTTTCTAGCGAACCAATTCTGGTGCCAAAATCTTCTTTTACTTCATATCCACCTCCAGGTGGCAGATCTCAGCAGGGTTCACCTAACCACCAATCAGGCCACATGAATATTCCTTATGCTGCTGGTGGACCTCAGGGGGGAATATCTTCACCAAACCTTTCTCCCTACTCTAACTCTCCACTTCAAATGACTGGGTTACCTCATGGATCACATTTTGGTGGAAATTTGCCTCATCTGACTCCTGGTCTTCCTGTTAATACTCGTCCCCTTACTCAATGGGCCAACCAAAGTGGCTCATTTGGAGATCATACTAGTCATTTAAATAATCTGTTGCAGCAACAGTTATCTCATCAGAATGGTTTGCCTCCACAGTTGATGCATCAGCCACAGCAGCCGCATCCTAGACTGCACCATCCAGTTCAGCAACCATTCAGCCATATGTCAGCAATGCAGTCTCAACTATTTAACCCCCACCTTCCTCCATCCCCACCCTTGATGAACAAGTTTGAAGCAATGTTCGGTATGAGTGATATTAGAGATGAAAGGTCAAGATTAGCTCAGAAAGGTAGACAGAATATGCGTTTTTCTCAACATGGCTTTGATACAGGTAGCTACAAAAGTGGTGGTGGGTGGCCATCATTCAGGTCCAAGTATATGACAGCTGATGAAATTGAGGGTATACTTCGAATGCAGCTTGCTGCAACACACAGCAATGACCCATATGTAGATGATTATTACCACCAGTATTGCCTTGCAAGAAAATCTGCTGGGGCGAAGTTGAAACATCATTTCTGTCCAACTCATTTAAGGGATCTTCCTCCTCGGGCACGAGCTAATGCTGAACCACATGCTTTTCTCCAAGTTGATGCTCTTGGGAGGGTCCCATTCTCTTCAATACGCAGGCCTCGCCCTCTTCTTGAAGTGGAGCCACCAAATTCATCTAGTCCGGGCAACACTGAACAGAAGGTTTCTGAGAAGCCTCTAGAACAGGAGCCAATGCTTGCTGCTAGGGTTACAATTGAGGATGGACTTTGTCTTCTCCTGGATGTGGATGATATCGATCGTTTTTTACAATTCAATCAGCTCCAAGATGGTGGAACCCAGTTGAGGCGTAGGCGTCACGGCTTGCTAGAAGGGCTCGCAGCATCTCTACAATTGGTTGATCCACTTGGGAAAAATGACCACACAGATGGGCTGGCTCTCAAGGATGATCTTGTGTTCCTGAGGTTAGTCTCTCTACCCAAGGGCCGAAAGCTTCTTGTCAAGTACCTACGGCTTCTTTTTCCAGGTGGTGAGCTCATGCGAATAGTCTGTATGGCCATCTTCCGCCATTTAAGGTTCTTGTTTGGTATCCTCCCTTCTGATCCAAGGGCTGCAGAAACTACAAATAATATAGCTAGGGTTGTTTCATCATGTGTTCGAGGTATGGACCTTGGTGCACTTAGTGCTTGTCTAGCAGCAGTGGTTTGTTCCTCGGAGCAACCCCCGCTTCGTCCCATTGGAAGCCCTGCAGGAGATGGTGCTTCCCTTATTCTGAATGCTGTTCTTGATAGGGCAACTGAACTCTTAACTGATCCTAATGCTGCTAGCAACTACAATATGACTAATCGGGCACTTTGGCAGGCCTCCTTTGATCAATTCTTTGGCCTTCTGACCAAGTATTGTGTAAACAAGTATGATACTATAATGCAGTCACTGCTAATGCAGGCCCCCACGAATATGGCTGTTATTGGCTCAGATGCAGCCAGAGCTATTAGTCGTGAAATGCCAGTTGAGCTGCTGCGTGCGAGTCTTCCTCACACCGATGATCACCAGAGACAGTTGCTCTTAGATTTCACGCAGCGGTCCATGCCTGTGGGAGGATCTAACAATCACGATGGGGGAAATGGTGCCCACATAAATTCAGAGTCTGTGCTAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000290 GO:0000932 GO:0000956 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0033962 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

PAT1

Protein Analysis

814

Amino Acids

89.83

Weight (kDa)

5.85

Isoelectric Point (pI)

61.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79090 AT1G79090 AT1G79090
fragaria_vesca	FvH4_3g15840 FvH4_3g15840
malus_domestica	MD05G1219500.v1.1 MD10G1201900.v1.1
prunus_persica	Prupe.4G140400_v2.0.a1
pyrus_communis	pycom05g20090 pycom10g17270
rosa_chinensis	RchiOBHm_Chr5g0026641
rosa_laevigata	RLG00000032942
rosa_multiflora	Rmu_sc0004490.1_g000005
rosa_roxburghii	Rroxscaffold_1G00052830
rosa_rugosa	Rorug05G0094500
rosa_samantha	Rh5AG188000 Rh5BG184400 Rh5CG204300 Rh5DG186700
rosa_wichuraiana	Rw5G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	544, 2411
AccI	GTMKAC	2 cut(s)	1090, 1201
AciI	CCGC	5 cut(s)	56, 917, 1849, 2009, 2365
AclWI	GGATC	8 cut(s)	297, 310, 736, 1341, 1679, 1880, 2090, 2392
AcoI	YGGCCR	2 cut(s)	1154, 1839
AcsI	RAATTY	3 cut(s)	745, 1456, 2422
AcuI	CTGAAG	1 cut(s)	396
AcyI	GRCGYC	1 cut(s)	1639
AdeI	CACNNNGTG	1 cut(s)	1967
AfaI	GTAC	2 cut(s)	458, 1790
AfiI	CCNNNNNNNGG	6 cut(s)	578, 581, 659, 1570, 1629, 2381
AhdI	GACNNNNNGTC	1 cut(s)	765
AhlI	ACTAGT	1 cut(s)	833
AjnI	CCWGG	4 cut(s)	577, 763, 1563, 1807
Alw21I	GWGCWC	3 cut(s)	281, 1821, 1963
Alw26I	GTCTC	5 cut(s)	143, 211, 981, 1759, 2332
Alw44I	GTGCAC	1 cut(s)	1959
AlwI	GGATC	8 cut(s)	297, 310, 736, 1341, 1679, 1880, 2090, 2392
AlwNI	CAGNNNCTG	2 cut(s)	2218, 2432
Ama87I	CYCGRG	1 cut(s)	1344
AoxI	GGCC	9 cut(s)	619, 801, 1154, 1424, 1768, 1839, 2145, 2167, 2229
ApaLI	GTGCAC	1 cut(s)	1959
ApoI	RAATTY	3 cut(s)	745, 1456, 2422
Asp700I	GAANNNNTTC	4 cut(s)	387, 466, 537, 667
AspLEI	GCGC	1 cut(s)	163
AspS9I	GGNCC	9 cut(s)	416, 650, 801, 1167, 1402, 1768, 1951, 2230, 2367
AsuC2I	CCSGG	1 cut(s)	1470
AsuHPI	GGTGA	5 cut(s)	305, 594, 663, 1826, 2324
AsuII	TTCGAA	1 cut(s)	1207
AsuNHI	GCTAGC	1 cut(s)	2108
AvaI	CYCGRG	1 cut(s)	1344
AvaII	GGWCC	6 cut(s)	416, 650, 1167, 1402, 1951, 2367
AxyI	CCTNAGG	2 cut(s)	654, 1745
BaeGI	GKGCMC	4 cut(s)	1351, 1963, 2137, 2416
BalI	TGGCCA	2 cut(s)	1156, 1841
BamHI	GGATCC	1 cut(s)	302
BanI	GGYRCC	2 cut(s)	544, 2411
BanII	GRGCYC	3 cut(s)	483, 1662, 1821
BarI	GAAGNNNNNNTAC	2 cut(s)	1864, 1896
BauI	CACGAG	1 cut(s)	1350
BbsI	GAAGAC	4 cut(s)	402, 761, 1550, 2306
Bbv12I	GWGCWC	3 cut(s)	281, 1821, 1963
BceAI	ACGGC	2 cut(s)	1660, 1811
BciT130I	CCWGG	4 cut(s)	579, 765, 1565, 1809
BciVI	GTATCC	1 cut(s)	1883
BclI	TGATCA	2 cut(s)	2155, 2329
BcnI	CCSGG	1 cut(s)	1470
BcoDI	GTCTC	5 cut(s)	143, 211, 981, 1759, 2332
BcuI	ACTAGT	1 cut(s)	833
BfmI	CTRYAG	4 cut(s)	153, 438, 1896, 2031
BfuI	GTATCC	1 cut(s)	1883
BglII	AGATCT	2 cut(s)	30, 587
Bme1390I	CCNGG	5 cut(s)	579, 765, 1470, 1565, 1809
Bme18I	GGWCC	6 cut(s)	416, 650, 1167, 1402, 1951, 2367
BmeRI	GACNNNNNGTC	1 cut(s)	765
BmeT110I	CYCGRG	1 cut(s)	1344
BmgT120I	GGNCC	9 cut(s)	416, 650, 801, 1167, 1402, 1768, 1951, 2230, 2367
BmiI	GGNNCC	9 cut(s)	304, 546, 1403, 1404, 1449, 1515, 1621, 2232, 2413
BmrFI	CCNGG	5 cut(s)	579, 765, 1470, 1565, 1809
BmrI	ACTGGG	2 cut(s)	723, 1618
BmtI	GCTAGC	1 cut(s)	2112
BmuI	ACTGGG	2 cut(s)	723, 1618
BpiI	GAAGAC	4 cut(s)	402, 761, 1550, 2306
BplI	GAGNNNNNCTC	2 cut(s)	2302, 2334
BpmI	CTGGAG	1 cut(s)	561
Bpu10I	CCTNAGC	1 cut(s)	477
Bpu14I	TTCGAA	1 cut(s)	1207
BpuEI	CTTGAG	1 cut(s)	1709
BpuMI	CCSGG	1 cut(s)	1470
Bsa29I	ATCGAT	1 cut(s)	1581
BsaBI	GATNNNNATC	1 cut(s)	1581
BsaHI	GRCGYC	1 cut(s)	1639
BsaJI	CCNNGG	5 cut(s)	1343, 1764, 1889, 1954, 1995
Bsc4I	CCNNNNNNNGG	6 cut(s)	578, 581, 659, 1570, 1629, 2381
Bse1I	ACTGG	7 cut(s)	286, 359, 718, 938, 1264, 1624, 2291
Bse21I	CCTNAGG	2 cut(s)	654, 1745
Bse3DI	GCAATG	3 cut(s)	975, 1041, 1240
Bse8I	GATNNNNATC	1 cut(s)	1581
BseBI	CCWGG	4 cut(s)	579, 765, 1565, 1809
BseCI	ATCGAT	1 cut(s)	1581
BseDI	CCNNGG	5 cut(s)	1343, 1764, 1889, 1954, 1995
BseGI	GGATG	8 cut(s)	265, 919, 934, 1004, 1552, 1573, 1579, 1735
BseJI	GATNNNNATC	1 cut(s)	1581
BseLI	CCNNNNNNNGG	6 cut(s)	578, 581, 659, 1570, 1629, 2381
BseMI	GCAATG	3 cut(s)	975, 1041, 1240
BseMII	CTCAG	8 cut(s)	51, 468, 605, 668, 1094, 1485, 1736, 2271
BseNI	ACTGG	7 cut(s)	286, 359, 718, 938, 1264, 1624, 2291
BseRI	GAGGAG	4 cut(s)	161, 185, 188, 1332
BseSI	GKGCMC	4 cut(s)	1351, 1963, 2137, 2416
BseYI	CCCAGC	1 cut(s)	1289
BsgI	GTGCAG	2 cut(s)	356, 914
Bsh1285I	CGRYCG	1 cut(s)	1585
BshFI	GGCC	9 cut(s)	621, 803, 1156, 1426, 1770, 1841, 2147, 2169, 2231
BshNI	GGYRCC	2 cut(s)	544, 2411
BshVI	ATCGAT	1 cut(s)	1581
BsiEI	CGRYCG	1 cut(s)	1585
BsiHKAI	GWGCWC	3 cut(s)	281, 1821, 1963
BsiHKCI	CYCGRG	1 cut(s)	1344
BsiSI	CCGG	1 cut(s)	1469
BslFI	GGGAC	3 cut(s)	771, 1388, 2001
BslI	CCNNNNNNNGG	6 cut(s)	578, 581, 659, 1570, 1629, 2381
BsmAI	GTCTC	5 cut(s)	143, 211, 981, 1759, 2332
BsmFI	GGGAC	3 cut(s)	771, 1388, 2001
BsmI	GAATGC	3 cut(s)	387, 1215, 2065
BsnI	GGCC	9 cut(s)	621, 803, 1156, 1426, 1770, 1841, 2147, 2169, 2231
BsoBI	CYCGRG	1 cut(s)	1344
Bsp119I	TTCGAA	1 cut(s)	1207
Bsp1286I	GDGCHC	8 cut(s)	281, 483, 1351, 1662, 1821, 1963, 2137, 2416
Bsp1407I	TGTACA	1 cut(s)	456
BspACI	CCGC	5 cut(s)	56, 917, 1849, 2009, 2365
BspANI	GGCC	9 cut(s)	621, 803, 1156, 1426, 1770, 1841, 2147, 2169, 2231
BspCNI	CTCAG	8 cut(s)	50, 469, 604, 667, 1093, 1486, 1737, 2270
BspDI	ATCGAT	1 cut(s)	1581
BspLI	GGNNCC	9 cut(s)	304, 546, 1403, 1404, 1449, 1515, 1621, 2232, 2413
BspMAI	CTGCAG	3 cut(s)	157, 1900, 2035
BspOI	GCTAGC	1 cut(s)	2112
BspPI	GGATC	8 cut(s)	297, 310, 736, 1341, 1679, 1880, 2090, 2392
BspT104I	TTCGAA	1 cut(s)	1207
BspT107I	GGYRCC	2 cut(s)	544, 2411
BsrDI	GCAATG	3 cut(s)	975, 1041, 1240
BsrGI	TGTACA	1 cut(s)	456
BsrI	ACTGG	7 cut(s)	286, 359, 718, 938, 1264, 1624, 2291
BssECI	CCNNGG	5 cut(s)	1343, 1764, 1889, 1954, 1995
BssNAI	GTATAC	1 cut(s)	1202
BssNI	GRCGYC	1 cut(s)	1639
BssSI	CACGAG	1 cut(s)	1350
BssT1I	CCWWGG	3 cut(s)	1764, 1889, 1954
Bst1107I	GTATAC	1 cut(s)	1202
Bst2BI	CACGAG	1 cut(s)	1350
Bst2UI	CCWGG	4 cut(s)	579, 765, 1565, 1809
Bst4CI	ACNGT	5 cut(s)	84, 420, 864, 894, 2343
Bst6I	CTCTTC	5 cut(s)	138, 162, 189, 1417, 1440
BstACI	GRCGYC	1 cut(s)	1639
BstAPI	GCANNNNNTGC	2 cut(s)	1967, 2218
BstAUI	TGTACA	1 cut(s)	456
BstBI	TTCGAA	1 cut(s)	1207
BstEII	GGTNACC	1 cut(s)	717
BstENI	CCTNNNNNAGG	1 cut(s)	2379
BstF5I	GGATG	8 cut(s)	265, 919, 934, 1004, 1552, 1573, 1579, 1735
BstHHI	GCGC	1 cut(s)	163
BstMAI	GTCTC	5 cut(s)	143, 211, 981, 1759, 2332
BstMCI	CGRYCG	1 cut(s)	1585
BstNI	CCWGG	4 cut(s)	579, 765, 1565, 1809
BstNSI	RCATGY	1 cut(s)	1373
BstPI	GGTNACC	1 cut(s)	717
BstSCI	CCNGG	5 cut(s)	577, 763, 1468, 1563, 1807
BstSFI	CTRYAG	4 cut(s)	153, 438, 1896, 2031
BstSLI	GKGCMC	4 cut(s)	1351, 1963, 2137, 2416
BstV2I	GAAGAC	4 cut(s)	402, 761, 1550, 2306
BstX2I	RGATCY	5 cut(s)	30, 302, 587, 1333, 2384
BstXI	CCANNNNNNTGG	4 cut(s)	1616, 1712, 2242, 2377
BstYI	RGATCY	5 cut(s)	30, 302, 587, 1333, 2384
BstZ17I	GTATAC	1 cut(s)	1202
Bsu15I	ATCGAT	1 cut(s)	1581
Bsu36I	CCTNAGG	2 cut(s)	654, 1745
BsuI	GTATCC	1 cut(s)	1883
BsuRI	GGCC	9 cut(s)	621, 803, 1156, 1426, 1770, 1841, 2147, 2169, 2231
BsuTUI	ATCGAT	1 cut(s)	1581
BtsCI	GGATG	8 cut(s)	265, 919, 934, 1004, 1552, 1573, 1579, 1735
BtsI	GCAGTG	2 cut(s)	1989, 2216
BtsIMutI	CAGTG	4 cut(s)	279, 1476, 1989, 2216
CaiI	CAGNNNCTG	2 cut(s)	2218, 2432
CfoI	GCGC	1 cut(s)	163
Cfr13I	GGNCC	9 cut(s)	416, 650, 801, 1167, 1402, 1768, 1951, 2230, 2367
ClaI	ATCGAT	1 cut(s)	1581
CseI	GACGC	1 cut(s)	1628
Csp6I	GTAC	2 cut(s)	457, 1789
CspCI	CAANNNNNGTGG	6 cut(s)	793, 828, 1126, 1161, 1250, 1285
CviAII	CATG	7 cut(s)	625, 725, 1115, 1370, 1822, 1935, 2371
CviQI	GTAC	2 cut(s)	457, 1789
DraI	TTTAAA	1 cut(s)	843
DraIII	CACNNNGTG	1 cut(s)	1967
DriI	GACNNNNNGTC	1 cut(s)	765
EaeI	YGGCCR	2 cut(s)	1154, 1839
Eam1104I	CTCTTC	5 cut(s)	138, 162, 189, 1417, 1440
Eam1105I	GACNNNNNGTC	1 cut(s)	765
EarI	CTCTTC	5 cut(s)	138, 162, 189, 1417, 1440
EciI	GGCGGA	1 cut(s)	1838
Ecl136II	GAGCTC	1 cut(s)	1819
Eco130I	CCWWGG	3 cut(s)	1764, 1889, 1954
Eco147I	AGGCCT	2 cut(s)	1426, 2147
Eco24I	GRGCYC	3 cut(s)	483, 1662, 1821
Eco32I	GATATC	1 cut(s)	1579
Eco47I	GGWCC	6 cut(s)	416, 650, 1167, 1402, 1951, 2367
Eco53kI	GAGCTC	1 cut(s)	1819
Eco57I	CTGAAG	1 cut(s)	396
Eco81I	CCTNAGG	2 cut(s)	654, 1745
Eco88I	CYCGRG	1 cut(s)	1344
Eco91I	GGTNACC	1 cut(s)	717
EcoICRI	GAGCTC	1 cut(s)	1819
EcoNI	CCTNNNNNAGG	1 cut(s)	2379
EcoO109I	RGGNCCY	2 cut(s)	1402, 2230
EcoO65I	GGTNACC	1 cut(s)	717
EcoRII	CCWGG	4 cut(s)	577, 763, 1563, 1807
EcoRV	GATATC	1 cut(s)	1579
EcoT14I	CCWWGG	3 cut(s)	1764, 1889, 1954
EcoT22I	ATGCAT	3 cut(s)	79, 91, 903
EcoT38I	GRGCYC	3 cut(s)	483, 1662, 1821
ErhI	CCWWGG	3 cut(s)	1764, 1889, 1954
FaeI	CATG	7 cut(s)	628, 728, 1118, 1373, 1825, 1938, 2374
FalI	AAGNNNNNCTT	2 cut(s)	394, 426
FaqI	GGGAC	3 cut(s)	771, 1388, 2001
FatI	CATG	7 cut(s)	624, 724, 1114, 1369, 1821, 1934, 2370
FauI	CCCGC	1 cut(s)	2016
FauNDI	CATATG	2 cut(s)	960, 1243
FbaI	TGATCA	2 cut(s)	2155, 2329
FblI	GTMKAC	2 cut(s)	1090, 1201
FokI	GGATG	8 cut(s)	272, 906, 921, 991, 1559, 1580, 1586, 1742
FriOI	GRGCYC	3 cut(s)	483, 1662, 1821
GlaI	GCGC	1 cut(s)	162
GsaI	CCCAGC	1 cut(s)	1293
GsuI	CTGGAG	1 cut(s)	561
HaeIII	GGCC	9 cut(s)	621, 803, 1156, 1426, 1770, 1841, 2147, 2169, 2231
HapII	CCGG	1 cut(s)	1469
HgaI	GACGC	1 cut(s)	1628
HhaI	GCGC	1 cut(s)	163
Hin1I	GRCGYC	1 cut(s)	1639
Hin1II	CATG	7 cut(s)	628, 728, 1118, 1373, 1825, 1938, 2374
Hin6I	GCGC	1 cut(s)	161
HinP1I	GCGC	1 cut(s)	161
HindIII	AAGCTT	1 cut(s)	1775
HinfI	GANTC	4 cut(s)	104, 760, 2311, 2429
HpaII	CCGG	1 cut(s)	1469
HphI	GGTGA	5 cut(s)	305, 594, 663, 1826, 2324
Hpy166II	GTNNAC	6 cut(s)	602, 650, 1091, 1202, 1961, 2191
Hpy8I	GTNNAC	6 cut(s)	602, 650, 1091, 1202, 1961, 2191
HpyAV	CCTTC	5 cut(s)	1007, 1480, 1649, 1890, 2180
HpyCH4III	ACNGT	5 cut(s)	84, 420, 864, 894, 2343
Hsp92I	GRCGYC	1 cut(s)	1639
Hsp92II	CATG	7 cut(s)	628, 728, 1118, 1373, 1825, 1938, 2374
HspAI	GCGC	1 cut(s)	161
KflI	GGGWCCC	1 cut(s)	1402
Ksp22I	TGATCA	2 cut(s)	2155, 2329
LmnI	GCTCC	5 cut(s)	276, 1447, 1513, 1611, 1999
MaeIII	GTNAC	4 cut(s)	717, 1534, 1640, 2214
MfeI	CAATTG	2 cut(s)	1539, 1676
MflI	RGATCY	5 cut(s)	30, 302, 587, 1333, 2384
MhlI	GDGCHC	8 cut(s)	281, 483, 1351, 1662, 1821, 1963, 2137, 2416
MlsI	TGGCCA	2 cut(s)	1156, 1841
MluNI	TGGCCA	2 cut(s)	1156, 1841
MlyI	GAGTC	3 cut(s)	754, 2320, 2438
MmeI	TCCRAC	1 cut(s)	1343
Mox20I	TGGCCA	2 cut(s)	1156, 1841
Mph1103I	ATGCAT	3 cut(s)	79, 91, 903
MroXI	GAANNNNTTC	4 cut(s)	387, 466, 537, 667
MscI	TGGCCA	2 cut(s)	1156, 1841
MseI	TTAA	7 cut(s)	236, 777, 842, 987, 1328, 1856, 2090
MslI	CAYNNNNRTG	7 cut(s)	738, 876, 1233, 1710, 2240, 2325, 2375
Msp20I	TGGCCA	2 cut(s)	1156, 1841
MspA1I	CMGCKG	3 cut(s)	490, 1184, 2365
MspI	CCGG	1 cut(s)	1469
MspR9I	CCNGG	5 cut(s)	579, 765, 1470, 1565, 1809
MunI	CAATTG	2 cut(s)	1539, 1676
Mva1269I	GAATGC	3 cut(s)	387, 1215, 2065
MvaI	CCWGG	4 cut(s)	579, 765, 1565, 1809
NciI	CCSGG	1 cut(s)	1470
NdeI	CATATG	2 cut(s)	960, 1243
NheI	GCTAGC	1 cut(s)	2108
NlaIII	CATG	7 cut(s)	628, 728, 1118, 1373, 1825, 1938, 2374
NlaIV	GGNNCC	9 cut(s)	304, 546, 1403, 1404, 1449, 1515, 1621, 2232, 2413
NmuCI	GTSAC	2 cut(s)	1640, 2214
NsiI	ATGCAT	3 cut(s)	79, 91, 903
NspI	RCATGY	1 cut(s)	1373
NspV	TTCGAA	1 cut(s)	1207
PceI	AGGCCT	2 cut(s)	1426, 2147
PctI	GAATGC	3 cut(s)	387, 1215, 2065
PdmI	GAANNNNTTC	4 cut(s)	387, 466, 537, 667
PfeI	GAWTC	1 cut(s)	104
PflFI	GACNNNGTC	1 cut(s)	1554
PfoI	TCCNGGA	1 cut(s)	1563
Ple19I	CGATCG	1 cut(s)	1585
PleI	GAGTC	3 cut(s)	754, 2319, 2437
PpsI	GAGTC	3 cut(s)	754, 2319, 2437
PpuMI	RGGWCCY	1 cut(s)	1402
Psp124BI	GAGCTC	1 cut(s)	1821
Psp5II	RGGWCCY	1 cut(s)	1402
Psp6I	CCWGG	4 cut(s)	577, 763, 1563, 1807
PspEI	GGTNACC	1 cut(s)	717
PspFI	CCCAGC	1 cut(s)	1289
PspGI	CCWGG	4 cut(s)	577, 763, 1563, 1807
PspN4I	GGNNCC	9 cut(s)	304, 546, 1403, 1404, 1449, 1515, 1621, 2232, 2413
PspPI	GGNCC	9 cut(s)	416, 650, 801, 1167, 1402, 1768, 1951, 2230, 2367
PspPPI	RGGWCCY	1 cut(s)	1402
PstI	CTGCAG	3 cut(s)	157, 1900, 2035
PstNI	CAGNNNCTG	2 cut(s)	2218, 2432
PsuI	RGATCY	5 cut(s)	30, 302, 587, 1333, 2384
PsyI	GACNNNGTC	1 cut(s)	1554
PvuI	CGATCG	1 cut(s)	1585
PvuII	CAGCTG	2 cut(s)	490, 1184
RsaI	GTAC	2 cut(s)	458, 1790
RsaNI	GTAC	2 cut(s)	457, 1789
RseI	CAYNNNNRTG	7 cut(s)	738, 876, 1233, 1710, 2240, 2325, 2375
SacI	GAGCTC	1 cut(s)	1821
SaqAI	TTAA	7 cut(s)	236, 777, 842, 987, 1328, 1856, 2090
Sau96I	GGNCC	9 cut(s)	416, 650, 801, 1167, 1402, 1768, 1951, 2230, 2367
SbfI	CCTGCAGG	1 cut(s)	2035
SchI	GAGTC	3 cut(s)	754, 2320, 2438
ScrFI	CCNGG	5 cut(s)	579, 765, 1470, 1565, 1809
SdaI	CCTGCAGG	1 cut(s)	2035
SduI	GDGCHC	8 cut(s)	281, 483, 1351, 1662, 1821, 1963, 2137, 2416
SfcI	CTRYAG	4 cut(s)	153, 438, 1896, 2031
SfuI	TTCGAA	1 cut(s)	1207
SinI	GGWCC	6 cut(s)	416, 650, 1167, 1402, 1951, 2367
SmiI	ATTTAAAT	1 cut(s)	843
SmiMI	CAYNNNNRTG	7 cut(s)	738, 876, 1233, 1710, 2240, 2325, 2375
SmlI	CTYRAG	1 cut(s)	1724
SmoI	CTYRAG	1 cut(s)	1724
SpeI	ACTAGT	1 cut(s)	833
Sse8387I	CCTGCAGG	1 cut(s)	2035
SseBI	AGGCCT	2 cut(s)	1426, 2147
SsiI	CCGC	5 cut(s)	56, 917, 1849, 2009, 2365
SspI	AATATT	3 cut(s)	372, 521, 631
SstI	GAGCTC	1 cut(s)	1821
StuI	AGGCCT	2 cut(s)	1426, 2147
StyD4I	CCNGG	5 cut(s)	577, 763, 1468, 1563, 1807
StyI	CCWWGG	3 cut(s)	1764, 1889, 1954
SwaI	ATTTAAAT	1 cut(s)	843
TaaI	ACNGT	5 cut(s)	84, 420, 864, 894, 2343
TaqI	TCGA	4 cut(s)	72, 1207, 1581, 1942
TatI	WGTACW	1 cut(s)	456
TauI	GCSGC	2 cut(s)	59, 919
TfiI	GAWTC	1 cut(s)	104
Tru1I	TTAA	7 cut(s)	236, 777, 842, 987, 1328, 1856, 2090
Tru9I	TTAA	7 cut(s)	236, 777, 842, 987, 1328, 1856, 2090
TscAI	CASTG	4 cut(s)	286, 1483, 1989, 2223
TseFI	GTSAC	2 cut(s)	1640, 2214
Tsp45I	GTSAC	2 cut(s)	1640, 2214
TspRI	CASTG	4 cut(s)	286, 1483, 1989, 2223
Tth111I	GACNNNGTC	1 cut(s)	1554
VneI	GTGCAC	1 cut(s)	1959
VpaK11BI	GGWCC	6 cut(s)	416, 650, 1167, 1402, 1951, 2367
XagI	CCTNNNNNAGG	1 cut(s)	2379
XapI	RAATTY	3 cut(s)	745, 1456, 2422
XbaI	TCTAGA	1 cut(s)	1504
XceI	RCATGY	1 cut(s)	1373
XmiI	GTMKAC	2 cut(s)	1090, 1201
XmnI	GAANNNNTTC	4 cut(s)	387, 466, 537, 667
Zsp2I	ATGCAT	3 cut(s)	79, 91, 903

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.