Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0011339

Physical Location & Seq

Genomic Coordinates Forward (+)

21601362 .. 21608717

Gene Structure 7356 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG188000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

ATGAACAACTCCACCCAACCCACTTCACAGATCTTCTCAGCGACAATATTTACGAGCGAGGTATTCGATGCATCACAATATGCATTTTTTGGTCAAGATTCTGTTGAGGAAGTTGAGTTGGGAGGTTTAGAAGATGAAGAGGAGACTGCAGTTGCGCTTGAAGAGGAGGAGTTTCTATATAACAAAGAAGAGGGTGGTGTCTCTCTATCTGATGCTGATGATCTGTCTTTAACTTTTGAAAAGTTGAACAAGGATGTAAATGGAACTAGGAGCACTGGAATAATTGGTGATAGAGGATCCAGAGAAAGTTCATCTGCTGCTGAATGGGTGCAGGAAAGTTTCCCTAACTGGATTGATGAAGAAATATTTGATGCTGAAAGCATTCAAGATGGGAAAAGATGGTCTTCAGGACCGTTTTCTTCTATTCGTCCTACAGAAGCAAAGCCTTTGTACAGAACTTCTTCATATCCTGAGCCCCCACAGCTGCCACAGCAGCAGCAACAACAACATCAATATTTTTCTAGCGAACCAATTCTGGTGCCAAAATCTTCTTTTACTTCATATCCACCTCCAGGTGGCAGATCTCAGCAGGGTTCACCTAACCACCAATCAGGCCACATGAACATTCCTTATGCTGCTGGTGGACCTCAGGGGGGAATATCTTCACCAAACCTTTCTCCCTACTCTAACTCTCCACTTCAAATGACTGGGTTACCTCATGGATCACATTTTGGTGGAAATTTGCCTCATCTGACTCCTGGTCTTCCTGTTAATACTCGTCCCCTTACTCAATGGGCCAACCAAAGTGGCTCATTTGGAGATCATCCTAGTCATTTAAATAATCTGTTGCAGCAACAGTTATCTCATCAGAATGGTTTGCCTCCACAGTTGATGCATCAGCCACAGCAGCCGCATCCTAGACTGCACCATCCAGTTCAGCAACCATTCAGCCATATTTCAGCAATGCAGTCTCAACTATTTAACCCCCACCTTCCTCCATCCCCACCCTTGATGAACAAGTTTGAAGCAATGTTCGGTATGAGTGATATTAGAGATGAAAGGTCAAGATTAGCTCAGAAAGGTAGACAGAATATGCGTTTTTCTCAACATGGCTTTGATACAGGTAGCTACAAAAGTGGTGGTGGGTGGCCATCATTTAGGTCCAAGTATATGGCAGCTGATGAAATTGAGGGTATACTTCGAATGCAGCTTGCTGCAACACACAGCAATGACCCATATGTAGATGATTATTACCACCAGTATTGCCTTGCAAGAAAATCTGCTGGGGCGAAGTTGAAACATCATTTCTGTCCAACTCATTTAAGGGATCTTCCTCCTCGGGCACGAGCTAATGCTGAACCACATGCTTTTCTCCAAGTTGATGCTCTTGGGAGGGTCCCATTCTCTTCAATACGCAGGCCTCGCCCTCTTCTTGAAGTGGAGCCACCAAATTCATCTAGTCCGGGTAACACTGAACAGAAGGTTTCTGAGAAGCCTCTAGAACAGGAGCCAATGCTTGCTGCTAGGGTTACAATTGAGGATGGACTTTGTCTTCTCCTGGATGTGGATGATATCGATCGTTTTTTACAATTCAATCAGCTCCAAGATGGTGGAACCCAGTTGAGGCGTAGGCGTCAGGGCTTGCTAGAAGGGCTCGCAGCATCTCTACAATTGGTTGATCCACTTGGGAAAAATGACGACACAGATGGGCTGGCTCTCAAGGATGATCTTGTGTTCCTGAGGTTAGTCTCTCTACCCAAGGGCCGAAAGCTTCTTGTCAAGTACCTACGGCTTCTTTTTCCAGGTGGTGAGCTCATGCGAATAGTCTGTATGGCCATCTTCCGCCATTTAAGGTTCTTGTTTGGTATCCTCCCTTCTGATCCAAGGGCTGCAGAAACTACAAATAATATCGCTAGGGTTGTTTCATCATGTGTTCGAGGTATGGATCTTGGTGCACTTAGTGCTTGTCTAGCAGCAGTGGTTTGTTCCTCGCAGCAACCCCCGCTTCGTCCCATTGGAAGCTCTGCAGGAGATGGTGCTTCCCTTATTCTGAATGCTGTTCTTGATAGGGCAACTGAACTCTTAACTGATCCTAATGCTGCTAGCAACTACAATATGACTAATCGGGCACTTTGGCAGGCCTCCTTTGATCAATTCTTTGGCCTTCTGACCAAGTATTGTGTAAACAAGTATGATACTATAATGCAGTCACTGCTAATGCAGGCCTCCACGAATATGGCCGTTATTGGCTCAGATGCAGCCAGAGCTATTAGTCGTGAAATGCCAGTTGAGCTGCTGCGTGCGAGTCTTCCTCACACCGATGATCACCAGAGACAGTTGCTCTTAGATTTCACACAGCGGTCCATGCCTGTGGGAGGATCTAACAATCACGATGGGGGAAATGGTGCCCACATAAATTCAGAGTCTGTGCTAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000290 GO:0000932 GO:0000956 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0033962 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

PAT1

Protein Analysis

812

Amino Acids

89.58

Weight (kDa)

5.79

Isoelectric Point (pI)

61.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79090 AT1G79090 AT1G79090
fragaria_vesca	FvH4_3g15840 FvH4_3g15840
malus_domestica	MD05G1219500.v1.1 MD10G1201900.v1.1
prunus_persica	Prupe.4G140400_v2.0.a1
pyrus_communis	pycom05g20090 pycom10g17270
rosa_chinensis	RchiOBHm_Chr5g0026641
rosa_laevigata	RLG00000032942
rosa_multiflora	Rmu_sc0004490.1_g000005
rosa_roxburghii	Rroxscaffold_1G00052830
rosa_rugosa	Rorug05G0094500
rosa_samantha	Rh5AG188000 Rh5BG184400 Rh5CG204300 Rh5DG186700
rosa_wichuraiana	Rw5G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	538, 2405
AccI	GTMKAC	2 cut(s)	1084, 1195
AciI	CCGC	4 cut(s)	911, 1843, 2003, 2359
AclWI	GGATC	9 cut(s)	291, 304, 730, 1335, 1673, 1874, 1953, 2084, 2386
AcoI	YGGCCR	3 cut(s)	1148, 1833, 2238
AcsI	RAATTY	3 cut(s)	739, 1450, 2416
AcuI	CTGAAG	1 cut(s)	390
AcyI	GRCGYC	1 cut(s)	1633
AdeI	CACNNNGTG	1 cut(s)	1961
AfaI	GTAC	2 cut(s)	452, 1784
AfiI	CCNNNNNNNGG	6 cut(s)	572, 575, 653, 1564, 1623, 2375
AhdI	GACNNNNNGTC	1 cut(s)	759
AjnI	CCWGG	4 cut(s)	571, 757, 1557, 1801
Alw21I	GWGCWC	3 cut(s)	275, 1815, 1957
Alw26I	GTCTC	5 cut(s)	137, 205, 975, 1753, 2326
Alw44I	GTGCAC	1 cut(s)	1953
AlwI	GGATC	9 cut(s)	291, 304, 730, 1335, 1673, 1874, 1953, 2084, 2386
AlwNI	CAGNNNCTG	2 cut(s)	2212, 2426
Ama87I	CYCGRG	1 cut(s)	1338
ApaLI	GTGCAC	1 cut(s)	1953
ApoI	RAATTY	3 cut(s)	739, 1450, 2416
Asp700I	GAANNNNTTC	4 cut(s)	381, 460, 531, 661
AspLEI	GCGC	1 cut(s)	157
AspS9I	GGNCC	7 cut(s)	410, 644, 795, 1161, 1396, 1762, 2361
AsuC2I	CCSGG	1 cut(s)	1464
AsuHPI	GGTGA	5 cut(s)	299, 588, 657, 1820, 2318
AsuII	TTCGAA	1 cut(s)	1201
AsuNHI	GCTAGC	1 cut(s)	2102
AvaI	CYCGRG	1 cut(s)	1338
AvaII	GGWCC	5 cut(s)	410, 644, 1161, 1396, 2361
AxyI	CCTNAGG	2 cut(s)	648, 1739
BaeGI	GKGCMC	4 cut(s)	1345, 1957, 2131, 2410
BalI	TGGCCA	2 cut(s)	1150, 1835
BamHI	GGATCC	1 cut(s)	296
BanI	GGYRCC	2 cut(s)	538, 2405
BanII	GRGCYC	3 cut(s)	477, 1656, 1815
BarI	GAAGNNNNNNTAC	2 cut(s)	1858, 1890
BauI	CACGAG	1 cut(s)	1344
BbsI	GAAGAC	4 cut(s)	396, 755, 1544, 2300
Bbv12I	GWGCWC	3 cut(s)	275, 1815, 1957
BceAI	ACGGC	2 cut(s)	1805, 2225
BciT130I	CCWGG	4 cut(s)	573, 759, 1559, 1803
BciVI	GTATCC	1 cut(s)	1877
BclI	TGATCA	2 cut(s)	2149, 2323
BcnI	CCSGG	1 cut(s)	1464
BcoDI	GTCTC	5 cut(s)	137, 205, 975, 1753, 2326
BfmI	CTRYAG	4 cut(s)	147, 432, 1890, 2025
BfuI	GTATCC	1 cut(s)	1877
BglII	AGATCT	2 cut(s)	30, 581
Bme1390I	CCNGG	5 cut(s)	573, 759, 1464, 1559, 1803
Bme18I	GGWCC	5 cut(s)	410, 644, 1161, 1396, 2361
BmeRI	GACNNNNNGTC	1 cut(s)	759
BmeT110I	CYCGRG	1 cut(s)	1338
BmgT120I	GGNCC	7 cut(s)	410, 644, 795, 1161, 1396, 1762, 2361
BmiI	GGNNCC	8 cut(s)	298, 540, 1397, 1398, 1443, 1509, 1615, 2407
BmrFI	CCNGG	5 cut(s)	573, 759, 1464, 1559, 1803
BmrI	ACTGGG	2 cut(s)	717, 1612
BmtI	GCTAGC	1 cut(s)	2106
BmuI	ACTGGG	2 cut(s)	717, 1612
BpiI	GAAGAC	4 cut(s)	396, 755, 1544, 2300
BplI	GAGNNNNNCTC	2 cut(s)	2296, 2328
BpmI	CTGGAG	1 cut(s)	555
Bpu10I	CCTNAGC	1 cut(s)	471
Bpu14I	TTCGAA	1 cut(s)	1201
BpuEI	CTTGAG	1 cut(s)	1703
BpuMI	CCSGG	1 cut(s)	1464
Bsa29I	ATCGAT	1 cut(s)	1575
BsaBI	GATNNNNATC	1 cut(s)	1575
BsaHI	GRCGYC	1 cut(s)	1633
BsaJI	CCNNGG	3 cut(s)	1337, 1758, 1883
Bsc4I	CCNNNNNNNGG	6 cut(s)	572, 575, 653, 1564, 1623, 2375
Bse1I	ACTGG	7 cut(s)	280, 353, 712, 932, 1258, 1618, 2285
Bse21I	CCTNAGG	2 cut(s)	648, 1739
Bse3DI	GCAATG	3 cut(s)	969, 1035, 1234
Bse8I	GATNNNNATC	1 cut(s)	1575
BseBI	CCWGG	4 cut(s)	573, 759, 1559, 1803
BseCI	ATCGAT	1 cut(s)	1575
BseDI	CCNNGG	3 cut(s)	1337, 1758, 1883
BseGI	GGATG	9 cut(s)	259, 823, 913, 928, 998, 1546, 1567, 1573, 1729
BseJI	GATNNNNATC	1 cut(s)	1575
BseLI	CCNNNNNNNGG	6 cut(s)	572, 575, 653, 1564, 1623, 2375
BseMI	GCAATG	3 cut(s)	969, 1035, 1234
BseMII	CTCAG	8 cut(s)	51, 462, 599, 662, 1088, 1479, 1730, 2265
BseNI	ACTGG	7 cut(s)	280, 353, 712, 932, 1258, 1618, 2285
BseRI	GAGGAG	4 cut(s)	155, 179, 182, 1326
BseSI	GKGCMC	4 cut(s)	1345, 1957, 2131, 2410
BseYI	CCCAGC	1 cut(s)	1283
BsgI	GTGCAG	2 cut(s)	350, 908
Bsh1285I	CGRYCG	1 cut(s)	1579
BshNI	GGYRCC	2 cut(s)	538, 2405
BshVI	ATCGAT	1 cut(s)	1575
BsiEI	CGRYCG	1 cut(s)	1579
BsiHKAI	GWGCWC	3 cut(s)	275, 1815, 1957
BsiHKCI	CYCGRG	1 cut(s)	1338
BsiSI	CCGG	1 cut(s)	1463
BslFI	GGGAC	3 cut(s)	765, 1382, 1995
BslI	CCNNNNNNNGG	6 cut(s)	572, 575, 653, 1564, 1623, 2375
BsmAI	GTCTC	5 cut(s)	137, 205, 975, 1753, 2326
BsmFI	GGGAC	3 cut(s)	765, 1382, 1995
BsmI	GAATGC	3 cut(s)	381, 1209, 2059
BsoBI	CYCGRG	1 cut(s)	1338
Bsp119I	TTCGAA	1 cut(s)	1201
Bsp1286I	GDGCHC	8 cut(s)	275, 477, 1345, 1656, 1815, 1957, 2131, 2410
Bsp1407I	TGTACA	1 cut(s)	450
BspACI	CCGC	4 cut(s)	911, 1843, 2003, 2359
BspCNI	CTCAG	8 cut(s)	50, 463, 598, 661, 1087, 1480, 1731, 2264
BspDI	ATCGAT	1 cut(s)	1575
BspLI	GGNNCC	8 cut(s)	298, 540, 1397, 1398, 1443, 1509, 1615, 2407
BspMAI	CTGCAG	3 cut(s)	151, 1894, 2029
BspOI	GCTAGC	1 cut(s)	2106
BspPI	GGATC	9 cut(s)	291, 304, 730, 1335, 1673, 1874, 1953, 2084, 2386
BspT104I	TTCGAA	1 cut(s)	1201
BspT107I	GGYRCC	2 cut(s)	538, 2405
BsrDI	GCAATG	3 cut(s)	969, 1035, 1234
BsrGI	TGTACA	1 cut(s)	450
BsrI	ACTGG	7 cut(s)	280, 353, 712, 932, 1258, 1618, 2285
BssECI	CCNNGG	3 cut(s)	1337, 1758, 1883
BssNAI	GTATAC	1 cut(s)	1196
BssNI	GRCGYC	1 cut(s)	1633
BssSI	CACGAG	1 cut(s)	1344
BssT1I	CCWWGG	2 cut(s)	1758, 1883
Bst1107I	GTATAC	1 cut(s)	1196
Bst2BI	CACGAG	1 cut(s)	1344
Bst2UI	CCWGG	4 cut(s)	573, 759, 1559, 1803
Bst4CI	ACNGT	4 cut(s)	414, 858, 888, 2337
Bst6I	CTCTTC	5 cut(s)	132, 156, 183, 1411, 1434
BstACI	GRCGYC	1 cut(s)	1633
BstAPI	GCANNNNNTGC	2 cut(s)	1961, 2212
BstAUI	TGTACA	1 cut(s)	450
BstBI	TTCGAA	1 cut(s)	1201
BstEII	GGTNACC	1 cut(s)	711
BstENI	CCTNNNNNAGG	1 cut(s)	2373
BstF5I	GGATG	9 cut(s)	259, 823, 913, 928, 998, 1546, 1567, 1573, 1729
BstHHI	GCGC	1 cut(s)	157
BstMAI	GTCTC	5 cut(s)	137, 205, 975, 1753, 2326
BstMCI	CGRYCG	1 cut(s)	1579
BstNI	CCWGG	4 cut(s)	573, 759, 1559, 1803
BstNSI	RCATGY	1 cut(s)	1367
BstPI	GGTNACC	1 cut(s)	711
BstSCI	CCNGG	5 cut(s)	571, 757, 1462, 1557, 1801
BstSFI	CTRYAG	4 cut(s)	147, 432, 1890, 2025
BstSLI	GKGCMC	4 cut(s)	1345, 1957, 2131, 2410
BstV2I	GAAGAC	4 cut(s)	396, 755, 1544, 2300
BstX2I	RGATCY	6 cut(s)	30, 296, 581, 1327, 1945, 2378
BstXI	CCANNNNNNTGG	4 cut(s)	1171, 1610, 2236, 2371
BstYI	RGATCY	6 cut(s)	30, 296, 581, 1327, 1945, 2378
BstZ17I	GTATAC	1 cut(s)	1196
Bsu15I	ATCGAT	1 cut(s)	1575
Bsu36I	CCTNAGG	2 cut(s)	648, 1739
BsuI	GTATCC	1 cut(s)	1877
BsuTUI	ATCGAT	1 cut(s)	1575
BtsCI	GGATG	9 cut(s)	259, 823, 913, 928, 998, 1546, 1567, 1573, 1729
BtsI	GCAGTG	2 cut(s)	1983, 2210
BtsIMutI	CAGTG	4 cut(s)	273, 1470, 1983, 2210
CaiI	CAGNNNCTG	2 cut(s)	2212, 2426
CfoI	GCGC	1 cut(s)	157
Cfr13I	GGNCC	7 cut(s)	410, 644, 795, 1161, 1396, 1762, 2361
ClaI	ATCGAT	1 cut(s)	1575
CseI	GACGC	1 cut(s)	1622
Csp6I	GTAC	2 cut(s)	451, 1783
CspCI	CAANNNNNGTGG	6 cut(s)	787, 822, 1120, 1155, 1244, 1279
CviAII	CATG	7 cut(s)	619, 719, 1109, 1364, 1816, 1929, 2365
CviQI	GTAC	2 cut(s)	451, 1783
DraI	TTTAAA	1 cut(s)	837
DraIII	CACNNNGTG	1 cut(s)	1961
DriI	GACNNNNNGTC	1 cut(s)	759
EaeI	YGGCCR	3 cut(s)	1148, 1833, 2238
Eam1104I	CTCTTC	5 cut(s)	132, 156, 183, 1411, 1434
Eam1105I	GACNNNNNGTC	1 cut(s)	759
EarI	CTCTTC	5 cut(s)	132, 156, 183, 1411, 1434
EciI	GGCGGA	1 cut(s)	1832
Ecl136II	GAGCTC	1 cut(s)	1813
Eco130I	CCWWGG	2 cut(s)	1758, 1883
Eco147I	AGGCCT	3 cut(s)	1420, 2141, 2225
Eco24I	GRGCYC	3 cut(s)	477, 1656, 1815
Eco32I	GATATC	1 cut(s)	1573
Eco47I	GGWCC	5 cut(s)	410, 644, 1161, 1396, 2361
Eco53kI	GAGCTC	1 cut(s)	1813
Eco57I	CTGAAG	1 cut(s)	390
Eco81I	CCTNAGG	2 cut(s)	648, 1739
Eco88I	CYCGRG	1 cut(s)	1338
Eco91I	GGTNACC	1 cut(s)	711
EcoICRI	GAGCTC	1 cut(s)	1813
EcoNI	CCTNNNNNAGG	1 cut(s)	2373
EcoO109I	RGGNCCY	1 cut(s)	1396
EcoO65I	GGTNACC	1 cut(s)	711
EcoRII	CCWGG	4 cut(s)	571, 757, 1557, 1801
EcoRV	GATATC	1 cut(s)	1573
EcoT14I	CCWWGG	2 cut(s)	1758, 1883
EcoT22I	ATGCAT	3 cut(s)	73, 85, 897
EcoT38I	GRGCYC	3 cut(s)	477, 1656, 1815
ErhI	CCWWGG	2 cut(s)	1758, 1883
FaeI	CATG	7 cut(s)	622, 722, 1112, 1367, 1819, 1932, 2368
FalI	AAGNNNNNCTT	2 cut(s)	388, 420
FaqI	GGGAC	3 cut(s)	765, 1382, 1995
FatI	CATG	7 cut(s)	618, 718, 1108, 1363, 1815, 1928, 2364
FauI	CCCGC	1 cut(s)	2010
FauNDI	CATATG	1 cut(s)	1237
FbaI	TGATCA	2 cut(s)	2149, 2323
FblI	GTMKAC	2 cut(s)	1084, 1195
FokI	GGATG	9 cut(s)	266, 810, 900, 915, 985, 1553, 1574, 1580, 1736
FriOI	GRGCYC	3 cut(s)	477, 1656, 1815
GlaI	GCGC	1 cut(s)	156
GsaI	CCCAGC	1 cut(s)	1287
GsuI	CTGGAG	1 cut(s)	555
HapII	CCGG	1 cut(s)	1463
HgaI	GACGC	1 cut(s)	1622
HhaI	GCGC	1 cut(s)	157
Hin1I	GRCGYC	1 cut(s)	1633
Hin1II	CATG	7 cut(s)	622, 722, 1112, 1367, 1819, 1932, 2368
Hin6I	GCGC	1 cut(s)	155
HinP1I	GCGC	1 cut(s)	155
HindIII	AAGCTT	1 cut(s)	1769
HinfI	GANTC	4 cut(s)	98, 754, 2305, 2423
HpaII	CCGG	1 cut(s)	1463
HphI	GGTGA	5 cut(s)	299, 588, 657, 1820, 2318
Hpy166II	GTNNAC	6 cut(s)	596, 644, 1085, 1196, 1955, 2185
Hpy8I	GTNNAC	6 cut(s)	596, 644, 1085, 1196, 1955, 2185
HpyAV	CCTTC	5 cut(s)	1001, 1474, 1643, 1884, 2174
HpyCH4III	ACNGT	4 cut(s)	414, 858, 888, 2337
Hsp92I	GRCGYC	1 cut(s)	1633
Hsp92II	CATG	7 cut(s)	622, 722, 1112, 1367, 1819, 1932, 2368
HspAI	GCGC	1 cut(s)	155
KflI	GGGWCCC	1 cut(s)	1396
Ksp22I	TGATCA	2 cut(s)	2149, 2323
LmnI	GCTCC	4 cut(s)	270, 1441, 1507, 1605
MaeIII	GTNAC	4 cut(s)	711, 1466, 1528, 2208
MfeI	CAATTG	2 cut(s)	1533, 1670
MflI	RGATCY	6 cut(s)	30, 296, 581, 1327, 1945, 2378
MhlI	GDGCHC	8 cut(s)	275, 477, 1345, 1656, 1815, 1957, 2131, 2410
MlsI	TGGCCA	2 cut(s)	1150, 1835
MluNI	TGGCCA	2 cut(s)	1150, 1835
MlyI	GAGTC	3 cut(s)	748, 2314, 2432
MmeI	TCCRAC	1 cut(s)	1337
Mox20I	TGGCCA	2 cut(s)	1150, 1835
Mph1103I	ATGCAT	3 cut(s)	73, 85, 897
MroXI	GAANNNNTTC	4 cut(s)	381, 460, 531, 661
MscI	TGGCCA	2 cut(s)	1150, 1835
MseI	TTAA	7 cut(s)	230, 771, 836, 981, 1322, 1850, 2084
MslI	CAYNNNNRTG	6 cut(s)	732, 870, 1227, 2234, 2319, 2369
Msp20I	TGGCCA	2 cut(s)	1150, 1835
MspA1I	CMGCKG	3 cut(s)	484, 1178, 2359
MspI	CCGG	1 cut(s)	1463
MspR9I	CCNGG	5 cut(s)	573, 759, 1464, 1559, 1803
MunI	CAATTG	2 cut(s)	1533, 1670
Mva1269I	GAATGC	3 cut(s)	381, 1209, 2059
MvaI	CCWGG	4 cut(s)	573, 759, 1559, 1803
NciI	CCSGG	1 cut(s)	1464
NdeI	CATATG	1 cut(s)	1237
NheI	GCTAGC	1 cut(s)	2102
NlaIII	CATG	7 cut(s)	622, 722, 1112, 1367, 1819, 1932, 2368
NlaIV	GGNNCC	8 cut(s)	298, 540, 1397, 1398, 1443, 1509, 1615, 2407
NmuCI	GTSAC	1 cut(s)	2208
NsiI	ATGCAT	3 cut(s)	73, 85, 897
NspI	RCATGY	1 cut(s)	1367
NspV	TTCGAA	1 cut(s)	1201
PceI	AGGCCT	3 cut(s)	1420, 2141, 2225
PctI	GAATGC	3 cut(s)	381, 1209, 2059
PdmI	GAANNNNTTC	4 cut(s)	381, 460, 531, 661
PfeI	GAWTC	1 cut(s)	98
PflFI	GACNNNGTC	1 cut(s)	1548
PfoI	TCCNGGA	1 cut(s)	1557
Ple19I	CGATCG	1 cut(s)	1579
PleI	GAGTC	3 cut(s)	748, 2313, 2431
PpsI	GAGTC	3 cut(s)	748, 2313, 2431
PpuMI	RGGWCCY	1 cut(s)	1396
Psp124BI	GAGCTC	1 cut(s)	1815
Psp5II	RGGWCCY	1 cut(s)	1396
Psp6I	CCWGG	4 cut(s)	571, 757, 1557, 1801
PspEI	GGTNACC	1 cut(s)	711
PspFI	CCCAGC	1 cut(s)	1283
PspGI	CCWGG	4 cut(s)	571, 757, 1557, 1801
PspN4I	GGNNCC	8 cut(s)	298, 540, 1397, 1398, 1443, 1509, 1615, 2407
PspPI	GGNCC	7 cut(s)	410, 644, 795, 1161, 1396, 1762, 2361
PspPPI	RGGWCCY	1 cut(s)	1396
PstI	CTGCAG	3 cut(s)	151, 1894, 2029
PstNI	CAGNNNCTG	2 cut(s)	2212, 2426
PsuI	RGATCY	6 cut(s)	30, 296, 581, 1327, 1945, 2378
PsyI	GACNNNGTC	1 cut(s)	1548
PvuI	CGATCG	1 cut(s)	1579
PvuII	CAGCTG	2 cut(s)	484, 1178
RsaI	GTAC	2 cut(s)	452, 1784
RsaNI	GTAC	2 cut(s)	451, 1783
RseI	CAYNNNNRTG	6 cut(s)	732, 870, 1227, 2234, 2319, 2369
SacI	GAGCTC	1 cut(s)	1815
SaqAI	TTAA	7 cut(s)	230, 771, 836, 981, 1322, 1850, 2084
Sau96I	GGNCC	7 cut(s)	410, 644, 795, 1161, 1396, 1762, 2361
SchI	GAGTC	3 cut(s)	748, 2314, 2432
ScrFI	CCNGG	5 cut(s)	573, 759, 1464, 1559, 1803
SduI	GDGCHC	8 cut(s)	275, 477, 1345, 1656, 1815, 1957, 2131, 2410
SfcI	CTRYAG	4 cut(s)	147, 432, 1890, 2025
SfuI	TTCGAA	1 cut(s)	1201
SinI	GGWCC	5 cut(s)	410, 644, 1161, 1396, 2361
SmiI	ATTTAAAT	1 cut(s)	837
SmiMI	CAYNNNNRTG	6 cut(s)	732, 870, 1227, 2234, 2319, 2369
SmlI	CTYRAG	1 cut(s)	1718
SmoI	CTYRAG	1 cut(s)	1718
SseBI	AGGCCT	3 cut(s)	1420, 2141, 2225
SsiI	CCGC	4 cut(s)	911, 1843, 2003, 2359
SspI	AATATT	3 cut(s)	48, 366, 515
SstI	GAGCTC	1 cut(s)	1815
StuI	AGGCCT	3 cut(s)	1420, 2141, 2225
StyD4I	CCNGG	5 cut(s)	571, 757, 1462, 1557, 1801
StyI	CCWWGG	2 cut(s)	1758, 1883
SwaI	ATTTAAAT	1 cut(s)	837
TaaI	ACNGT	4 cut(s)	414, 858, 888, 2337
TaqI	TCGA	4 cut(s)	66, 1201, 1575, 1936
TatI	WGTACW	1 cut(s)	450
TauI	GCSGC	1 cut(s)	913
TfiI	GAWTC	1 cut(s)	98
Tru1I	TTAA	7 cut(s)	230, 771, 836, 981, 1322, 1850, 2084
Tru9I	TTAA	7 cut(s)	230, 771, 836, 981, 1322, 1850, 2084
TscAI	CASTG	4 cut(s)	280, 1477, 1983, 2217
TseFI	GTSAC	1 cut(s)	2208
Tsp45I	GTSAC	1 cut(s)	2208
TspRI	CASTG	4 cut(s)	280, 1477, 1983, 2217
Tth111I	GACNNNGTC	1 cut(s)	1548
VneI	GTGCAC	1 cut(s)	1953
VpaK11BI	GGWCC	5 cut(s)	410, 644, 1161, 1396, 2361
XagI	CCTNNNNNAGG	1 cut(s)	2373
XapI	RAATTY	3 cut(s)	739, 1450, 2416
XbaI	TCTAGA	1 cut(s)	1498
XceI	RCATGY	1 cut(s)	1367
XmiI	GTMKAC	2 cut(s)	1084, 1195
XmnI	GAANNNNTTC	4 cut(s)	381, 460, 531, 661
Zsp2I	ATGCAT	3 cut(s)	73, 85, 897

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.