MD05G1364500.v1.1

Serine aminopeptidase, S33

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
47935734 .. 47944481
8748 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1364500.v1.1.491

Sequence Viewer

Length: 1452 bp
ATGATCCATCAGTTCATTAATTTTGTCATTCGCCCTCCCAGGGCAGAGTATAACCCAGATCAATATCTTTGGGAAAAGGATTTCACGCTTGCAGGTAGAGCATACAAACGACAAGACTTGGAGCTTACGAATGCTAGGGGCCATACCTTGCGTTGTAGTCATTATCTGCCTTCACCTTTCCCTGAAGATGTTTCTCTTCCATGTGTTATATACTGCCATGGAAACAGTGGGTGTAGGGCAGATGCAAATGAAGCTGCCGTAATGCTTCTTCCATCAAATATCACCGTTTTTACTCTTGATTTTTCGGGTTCAGGATTATCTGATGGTGATTATGTCAGCCTTGGTTGGCATGAGAGAGATGACCTCAAGATTGTGGTTTCATATTTAAGAAGCAAAAAGCAAAACTTGCGTATAGGTCTTTGGGGGCGATCGATGGGCGCAGTCACATGCCTACTTTATGGAGCAGAAGACCCTTCCATAGCCGGAATGGTGTTGGATAGTGCCTTTTCAAGCTTGTATGTTCTAATGATGGAACTAGTTGATGTATACAAGATTCGGCTTCCTAAATTTACAGTTAAGATGGCAGTACAATATATGCGTCGGATAATTGAGAAGAAGGCAAAGTTTGATATCATGGATCTTAATTGCTTGCAGGTTGCACCCAAAACATTCATTCCTGCTTTATTTGGACATGCTAAGGATGACAAATTCATCCAAACCCATCATTCTGACATCATCTACAAGTCTTATGCGGGGGACAAAAATATTATACATTTCGATGGTGATCACAACTCTTCTCGGCCACAGTTTTATTATGATTCAGTTTCCATTTTCTTCTATAATGTTCTTCATCCCCCACAAACGTCTTGTCATTCATGTAAGCTTGAGAAGTATTATGATTTGGGGGATTTGAAGATTGGTGCTGGTTTGGATGAGGGTTTGTTATATGAGATAATTACTGGAGTTCATTCTGCGGGTACTGACGTGGCAAGTTCATCTTCTGTTCCTCCTGCCATTTCAACCACAAAATGTGTTGGCGAACTTCTTTCTGAAATTGCACCAGTGACGACTGCTGTTGATTCTGTGCATGATGAAGCTGACACACTTAACAGTCACGAACCATCACATTTAGAGGAGCAGCCTAATGATGAGAATGTAGAATGTTGTTCATATACAAGCTCAAACAGGGAGAGTTGGGGCAGATGCTCTTCATTAGGAGGCAGTGATGAAGAATCTTCTGCTGCTGACAGCAGTCATCAGAAGAACCTTAAGGTGTTTGCGATGCCTCTTGGATGCATACAACAAAAATCATCAGAGCTAAGAAAAGAGGAAAAAAAGAAGAAGAAAGTTTCCATTGCTCCAAAGAAGCCCAAGGGTGAGAAATTTGAGAAGTTAGGGGCCCTTGGCAAACGACTGCGTCTTTGCATCCTAAAGCGAGTAAAAAAATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

484

Amino Acids

54.03

Weight (kDa)

6.98

Isoelectric Point (pI)

49.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 67 - 171 1.6e-06 alpha/beta hydrolase fold
Hydrolase_4 PF12146 68 - 175 6.2e-10 Serine aminopeptidase, S33
Peptidase_S15 PF02129 95 - 175 1e-05 X-Pro dipeptidyl-peptidase (S15 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 83, 643
AccI GTMKAC 1 cut(s) 546
AciI CCGC 2 cut(s) 752, 974
AclWI GGATC 1 cut(s) 645
AcoI YGGCCR 1 cut(s) 800
AcsI RAATTY 3 cut(s) 566, 707, 1382
AcuI CTGAAG 1 cut(s) 204
AfaI GTAC 2 cut(s) 588, 979
AfiI CCNNNNNNNGG 1 cut(s) 40
AflII CTTAAG 1 cut(s) 1268
AgsI TTSAA 3 cut(s) 510, 913, 1020
AhlI ACTAGT 1 cut(s) 535
AjiI CACGTC 1 cut(s) 985
AjnI CCWGG 1 cut(s) 38
AluBI AGCT 7 cut(s) 124, 254, 513, 883, 1097, 1179, 1318
AluI AGCT 7 cut(s) 124, 254, 513, 883, 1097, 1179, 1318
AlwI GGATC 1 cut(s) 645
AoxI GGCC 3 cut(s) 139, 800, 1398
ApaI GGGCCC 1 cut(s) 1402
ApeKI GCWGC 3 cut(s) 254, 1138, 1241
ApoI RAATTY 3 cut(s) 566, 707, 1382
ArsI GACNNNNNNTTYG 4 cut(s) 853, 885, 1404, 1436
AseI ATTAAT 1 cut(s) 18
AspLEI GCGC 1 cut(s) 440
AspS9I GGNCC 3 cut(s) 139, 1398, 1399
AsuHPI GGTGA 5 cut(s) 165, 274, 338, 794, 1388
BaeGI GKGCMC 1 cut(s) 1402
BaeI ACNNNNGTAYC 2 cut(s) 969, 1002
BanII GRGCYC 1 cut(s) 1402
BarI GAAGNNNNNNTAC 2 cut(s) 252, 284
BbsI GAAGAC 1 cut(s) 474
BbvI GCAGC 3 cut(s) 241, 1150, 1228
BccI CCATC 9 cut(s) 15, 280, 317, 427, 523, 574, 729, 773, 1129
BceAI ACGGC 1 cut(s) 242
BciT130I CCWGG 1 cut(s) 40
BclI TGATCA 1 cut(s) 784
BcuI ACTAGT 1 cut(s) 535
BfaI CTAG 2 cut(s) 135, 536
BfrI CTTAAG 1 cut(s) 1268
BfuAI ACCTGC 2 cut(s) 83, 643
BisI GCNGC 3 cut(s) 255, 1139, 1242
BlsI GCNGC 3 cut(s) 256, 1140, 1243
Bme1390I CCNGG 1 cut(s) 40
BmgBI CACGTC 1 cut(s) 985
BmgT120I GGNCC 3 cut(s) 139, 1398, 1399
BmiI GGNNCC 3 cut(s) 140, 1399, 1400
BmrFI CCNGG 1 cut(s) 40
BmsI GCATC 5 cut(s) 232, 1193, 1272, 1283, 1434
BoxI GACNNNNGTC 1 cut(s) 1251
BpiI GAAGAC 1 cut(s) 474
BplI GAGNNNNNCTC 2 cut(s) 348, 380
BpmI CTGGAG 1 cut(s) 981
Bpu10I CCTNAGC 1 cut(s) 696
BpuEI CTTGAG 2 cut(s) 350, 905
Bsa29I ATCGAT 1 cut(s) 431
BsaBI GATNNNNATC 2 cut(s) 63, 783
BsaJI CCNNGG 6 cut(s) 38, 39, 217, 340, 1371, 1402
Bsc4I CCNNNNNNNGG 1 cut(s) 40
Bse1I ACTGG 2 cut(s) 964, 1061
Bse3DI GCAATG 1 cut(s) 1353
Bse8I GATNNNNATC 2 cut(s) 63, 783
BseBI CCWGG 1 cut(s) 40
BseCI ATCGAT 1 cut(s) 431
BseDI CCNNGG 6 cut(s) 38, 39, 217, 340, 1371, 1402
BseGI GGATG 6 cut(s) 706, 711, 850, 937, 1298, 1425
BseJI GATNNNNATC 2 cut(s) 63, 783
BseLI CCNNNNNNNGG 1 cut(s) 40
BseMI GCAATG 1 cut(s) 1353
BseNI ACTGG 2 cut(s) 964, 1061
BseRI GAGGAG 1 cut(s) 1148
BseSI GKGCMC 1 cut(s) 1402
BseXI GCAGC 3 cut(s) 241, 1150, 1228
Bsh1285I CGRYCG 1 cut(s) 431
BshFI GGCC 3 cut(s) 141, 802, 1400
BshVI ATCGAT 1 cut(s) 431
BsiEI CGRYCG 1 cut(s) 431
BsiSI CCGG 1 cut(s) 483
BslFI GGGAC 1 cut(s) 770
BslI CCNNNNNNNGG 1 cut(s) 40
BsmFI GGGAC 1 cut(s) 770
BsmI GAATGC 1 cut(s) 136
BsnI GGCC 3 cut(s) 141, 802, 1400
Bsp120I GGGCCC 1 cut(s) 1398
Bsp1286I GDGCHC 1 cut(s) 1402
Bsp143I GATC 5 cut(s) 3, 58, 428, 637, 784
Bsp19I CCATGG 1 cut(s) 217
BspACI CCGC 2 cut(s) 752, 974
BspANI GGCC 3 cut(s) 141, 802, 1400
BspDI ATCGAT 1 cut(s) 431
BspLI GGNNCC 3 cut(s) 140, 1399, 1400
BspMI ACCTGC 2 cut(s) 83, 643
BspPI GGATC 1 cut(s) 645
BspQI GCTCTTC 1 cut(s) 1213
BspTI CTTAAG 1 cut(s) 1268
BsrDI GCAATG 1 cut(s) 1353
BsrI ACTGG 2 cut(s) 964, 1061
BssECI CCNNGG 6 cut(s) 38, 39, 217, 340, 1371, 1402
BssMI GATC 5 cut(s) 3, 58, 428, 637, 784
BssNAI GTATAC 1 cut(s) 547
BssT1I CCWWGG 4 cut(s) 217, 340, 1371, 1402
Bst1107I GTATAC 1 cut(s) 547
Bst2UI CCWGG 1 cut(s) 40
Bst4CI ACNGT 5 cut(s) 227, 286, 574, 807, 1112
Bst6I CTCTTC 3 cut(s) 201, 799, 1213
BstAFI CTTAAG 1 cut(s) 1268
BstAPI GCANNNNNTGC 1 cut(s) 406
BstC8I GCNNGC 2 cut(s) 90, 650
BstDEI CTNAG 2 cut(s) 696, 1319
BstDSI CCRYGG 1 cut(s) 217
BstF5I GGATG 6 cut(s) 706, 711, 850, 937, 1298, 1425
BstHHI GCGC 1 cut(s) 440
BstKTI GATC 5 cut(s) 6, 61, 431, 640, 787
BstMBI GATC 5 cut(s) 3, 58, 428, 637, 784
BstMCI CGRYCG 1 cut(s) 431
BstMWI GCNNNNNNNGC 3 cut(s) 98, 251, 406
BstNI CCWGG 1 cut(s) 40
BstNSI RCATGY 2 cut(s) 450, 695
BstPAI GACNNNNGTC 1 cut(s) 1251
BstSCI CCNGG 1 cut(s) 38
BstSLI GKGCMC 1 cut(s) 1402
BstV1I GCAGC 3 cut(s) 241, 1150, 1228
BstV2I GAAGAC 1 cut(s) 474
BstX2I RGATCY 1 cut(s) 637
BstYI RGATCY 1 cut(s) 637
BstZ17I GTATAC 1 cut(s) 547
Bsu15I ATCGAT 1 cut(s) 431
BsuRI GGCC 3 cut(s) 141, 802, 1400
BsuTUI ATCGAT 1 cut(s) 431
BtgI CCRYGG 1 cut(s) 217
BtgZI GCGATG 1 cut(s) 1295
BtrI CACGTC 1 cut(s) 985
BtsCI GGATG 6 cut(s) 706, 711, 850, 937, 1298, 1425
BtsI GCAGTG 1 cut(s) 1228
BtsIMutI CAGTG 3 cut(s) 232, 1068, 1228
BveI ACCTGC 2 cut(s) 83, 643
Cac8I GCNNGC 2 cut(s) 90, 650
CfoI GCGC 1 cut(s) 440
Cfr13I GGNCC 3 cut(s) 139, 1398, 1399
ClaI ATCGAT 1 cut(s) 431
CseI GACGC 2 cut(s) 587, 1406
Csp6I GTAC 2 cut(s) 587, 978
CviAII CATG 8 cut(s) 201, 218, 350, 447, 634, 692, 876, 1088
CviQI GTAC 2 cut(s) 587, 978
DdeI CTNAG 2 cut(s) 696, 1319
DpnI GATC 5 cut(s) 5, 60, 430, 639, 786
DpnII GATC 5 cut(s) 3, 58, 428, 637, 784
EaeI YGGCCR 1 cut(s) 800
Eam1104I CTCTTC 3 cut(s) 201, 799, 1213
EarI CTCTTC 3 cut(s) 201, 799, 1213
Eco130I CCWWGG 4 cut(s) 217, 340, 1371, 1402
Eco24I GRGCYC 1 cut(s) 1402
Eco32I GATATC 1 cut(s) 631
Eco57I CTGAAG 1 cut(s) 204
EcoO109I RGGNCCY 2 cut(s) 1398, 1399
EcoRII CCWGG 1 cut(s) 38
EcoRV GATATC 1 cut(s) 631
EcoT14I CCWWGG 4 cut(s) 217, 340, 1371, 1402
EcoT22I ATGCAT 1 cut(s) 1298
EcoT38I GRGCYC 1 cut(s) 1402
ErhI CCWWGG 4 cut(s) 217, 340, 1371, 1402
FaeI CATG 8 cut(s) 204, 221, 353, 450, 637, 695, 879, 1091
FalI AAGNNNNNCTT 4 cut(s) 389, 421, 982, 1014
FaqI GGGAC 1 cut(s) 770
FatI CATG 8 cut(s) 200, 217, 349, 446, 633, 691, 875, 1087
FauI CCCGC 2 cut(s) 745, 967
FbaI TGATCA 1 cut(s) 784
FblI GTMKAC 1 cut(s) 546
Fnu4HI GCNGC 3 cut(s) 255, 1139, 1242
FokI GGATG 6 cut(s) 698, 713, 837, 944, 1305, 1412
FriOI GRGCYC 1 cut(s) 1402
Fsp4HI GCNGC 3 cut(s) 255, 1139, 1242
FspBI CTAG 2 cut(s) 135, 536
GlaI GCGC 1 cut(s) 439
GluI GCNGC 3 cut(s) 255, 1139, 1242
GsuI CTGGAG 1 cut(s) 981
HaeIII GGCC 3 cut(s) 141, 802, 1400
HapII CCGG 1 cut(s) 483
HgaI GACGC 2 cut(s) 587, 1406
HhaI GCGC 1 cut(s) 440
Hin1II CATG 8 cut(s) 204, 221, 353, 450, 637, 695, 879, 1091
Hin6I GCGC 1 cut(s) 438
HinP1I GCGC 1 cut(s) 438
HindIII AAGCTT 2 cut(s) 511, 881
HinfI GANTC 4 cut(s) 553, 818, 1079, 1232
HpaII CCGG 1 cut(s) 483
HphI GGTGA 5 cut(s) 165, 274, 338, 794, 1388
Hpy166II GTNNAC 1 cut(s) 547
Hpy188I TCNGA 6 cut(s) 322, 603, 730, 1051, 1260, 1315
Hpy188III TCNNGA 4 cut(s) 296, 312, 367, 1115
Hpy8I GTNNAC 1 cut(s) 547
Hpy99I CGWCG 1 cut(s) 603
HpyAV CCTTC 3 cut(s) 180, 483, 610
HpyCH4III ACNGT 5 cut(s) 227, 286, 574, 807, 1112
HpyCH4IV ACGT 2 cut(s) 863, 984
HpyCH4V TGCA 8 cut(s) 92, 245, 652, 659, 1058, 1087, 1296, 1425
HpyF10VI GCNNNNNNNGC 3 cut(s) 98, 251, 406
HpyF3I CTNAG 2 cut(s) 696, 1319
HpySE526I ACGT 2 cut(s) 863, 984
Hsp92II CATG 8 cut(s) 204, 221, 353, 450, 637, 695, 879, 1091
HspAI GCGC 1 cut(s) 438
Ksp22I TGATCA 1 cut(s) 784
Kzo9I GATC 5 cut(s) 3, 58, 428, 637, 784
LguI GCTCTTC 1 cut(s) 1213
LmnI GCTCC 4 cut(s) 121, 461, 1135, 1363
Lsp1109I GCAGC 3 cut(s) 241, 1150, 1228
LweI GCATC 5 cut(s) 232, 1193, 1272, 1283, 1434
MaeI CTAG 2 cut(s) 135, 536
MaeII ACGT 2 cut(s) 863, 984
MaeIII GTNAC 3 cut(s) 442, 1063, 1112
MalI GATC 5 cut(s) 5, 60, 430, 639, 786
MboI GATC 5 cut(s) 3, 58, 428, 637, 784
MflI RGATCY 1 cut(s) 637
MhlI GDGCHC 1 cut(s) 1402
MluCI AATT 9 cut(s) 19, 566, 606, 643, 707, 954, 1053, 1382, 1445
MmeI TCCRAC 2 cut(s) 474, 581
MnlI CCTC 8 cut(s) 45, 374, 928, 1017, 1126, 1211, 1296, 1321
Mph1103I ATGCAT 1 cut(s) 1298
MseI TTAA 6 cut(s) 18, 386, 576, 642, 1107, 1269
MslI CAYNNNNRTG 1 cut(s) 777
MspCI CTTAAG 1 cut(s) 1268
MspI CCGG 1 cut(s) 483
MspR9I CCNGG 1 cut(s) 40
Mva1269I GAATGC 1 cut(s) 136
MvaI CCWGG 1 cut(s) 40
MwoI GCNNNNNNNGC 3 cut(s) 98, 251, 406
NcoI CCATGG 1 cut(s) 217
NdeII GATC 5 cut(s) 3, 58, 428, 637, 784
NlaIII CATG 8 cut(s) 204, 221, 353, 450, 637, 695, 879, 1091
NlaIV GGNNCC 3 cut(s) 140, 1399, 1400
NmeAIII GCCGAG 1 cut(s) 778
NmuCI GTSAC 3 cut(s) 442, 1063, 1112
NsiI ATGCAT 1 cut(s) 1298
NspI RCATGY 2 cut(s) 450, 695
PasI CCCWGGG 1 cut(s) 39
PciSI GCTCTTC 1 cut(s) 1213
PctI GAATGC 1 cut(s) 136
PfeI GAWTC 4 cut(s) 553, 818, 1079, 1232
PflFI GACNNNGTC 1 cut(s) 1416
PkrI GCNGC 3 cut(s) 256, 1140, 1243
Ple19I CGATCG 1 cut(s) 431
PshAI GACNNNNGTC 1 cut(s) 1251
PshBI ATTAAT 1 cut(s) 18
Psp6I CCWGG 1 cut(s) 38
PspGI CCWGG 1 cut(s) 38
PspN4I GGNNCC 3 cut(s) 140, 1399, 1400
PspOMI GGGCCC 1 cut(s) 1398
PspPI GGNCC 3 cut(s) 139, 1398, 1399
PsuI RGATCY 1 cut(s) 637
PsyI GACNNNGTC 1 cut(s) 1416
PvuI CGATCG 1 cut(s) 431
RsaI GTAC 2 cut(s) 588, 979
RsaNI GTAC 2 cut(s) 587, 978
RseI CAYNNNNRTG 1 cut(s) 777
SapI GCTCTTC 1 cut(s) 1213
SaqAI TTAA 6 cut(s) 18, 386, 576, 642, 1107, 1269
SatI GCNGC 3 cut(s) 255, 1139, 1242
Sau3AI GATC 5 cut(s) 3, 58, 428, 637, 784
Sau96I GGNCC 3 cut(s) 139, 1398, 1399
ScrFI CCNGG 1 cut(s) 40
SduI GDGCHC 1 cut(s) 1402
SfaNI GCATC 5 cut(s) 232, 1193, 1272, 1283, 1434
SmiMI CAYNNNNRTG 1 cut(s) 777
SmlI CTYRAG 3 cut(s) 365, 884, 1268
SmoI CTYRAG 3 cut(s) 365, 884, 1268
SpeI ACTAGT 1 cut(s) 535
Sse9I AATT 9 cut(s) 19, 566, 606, 643, 707, 954, 1053, 1382, 1445
SsiI CCGC 2 cut(s) 752, 974
SspI AATATT 1 cut(s) 766
SspMI CTAG 2 cut(s) 135, 536
StyD4I CCNGG 1 cut(s) 38
StyI CCWWGG 4 cut(s) 217, 340, 1371, 1402
TaaI ACNGT 5 cut(s) 227, 286, 574, 807, 1112
TaiI ACGT 2 cut(s) 866, 987
TaqI TCGA 2 cut(s) 431, 777
TasI AATT 9 cut(s) 19, 566, 606, 643, 707, 954, 1053, 1382, 1445
TatI WGTACW 1 cut(s) 586
TfiI GAWTC 4 cut(s) 553, 818, 1079, 1232
Tru1I TTAA 6 cut(s) 18, 386, 576, 642, 1107, 1269
Tru9I TTAA 6 cut(s) 18, 386, 576, 642, 1107, 1269
TscAI CASTG 3 cut(s) 232, 1068, 1228
TseFI GTSAC 3 cut(s) 442, 1063, 1112
TseI GCWGC 3 cut(s) 254, 1138, 1241
Tsp45I GTSAC 3 cut(s) 442, 1063, 1112
TspRI CASTG 3 cut(s) 232, 1068, 1228
Tth111I GACNNNGTC 1 cut(s) 1416
Vha464I CTTAAG 1 cut(s) 1268
VspI ATTAAT 1 cut(s) 18
XapI RAATTY 3 cut(s) 566, 707, 1382
XceI RCATGY 2 cut(s) 450, 695
XcmI CCANNNNNNNNNTGG 2 cut(s) 224, 484
XmiI GTMKAC 1 cut(s) 546
XspI CTAG 2 cut(s) 135, 536
Zsp2I ATGCAT 1 cut(s) 1298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.