MD06G1104500.v1.1

KAT8 regulatory NSL complex subunit

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
24312894 .. 24313899
1006 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1104500.v1.1.491

Sequence Viewer

Length: 339 bp
ATGCGAGTCAGTTGCATGGTAGCTTGCAAGGAAGATATTCATGCTTCAGCAATAAATTGCTTAGGATACCCACTAAAGGTTCGCTGTTCTGATGTTGTCCCTGCATCTTATTTCGTGCCAAGTGCTAGTAAAGATGGGCTTTGTCCATTGGAAAAGCTAGAAACTACTCGCAAGAAGATGAAATGCCCTAGTGATTTGCATGTCATTGATGGTGGCGATCACTCCTTCAAGATTGGAAGGACACATCTGCAAACCACTGGGTTATCCCAAGATGAAGCTGAAAATCTTGCTCTTCAAGCCATAGCAGCCTTTTGGTTGAGGTCTCTTGAAGGAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

113

Amino Acids

12.28

Weight (kDa)

7.63

Isoelectric Point (pI)

50.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 30
AfiI CCNNNNNNNGG 1 cut(s) 76
AgsI TTSAA 3 cut(s) 229, 296, 329
AluBI AGCT 3 cut(s) 23, 157, 278
AluI AGCT 3 cut(s) 23, 157, 278
Alw26I GTCTC 1 cut(s) 327
ApeKI GCWGC 1 cut(s) 305
Asp700I GAANNNNTTC 1 cut(s) 36
BbvI GCAGC 1 cut(s) 317
BccI CCATC 2 cut(s) 128, 203
BcgI CGANNNNNNTGC 1 cut(s) 28
BciVI GTATCC 1 cut(s) 59
BcoDI GTCTC 1 cut(s) 327
BfaI CTAG 3 cut(s) 126, 158, 189
BfuI GTATCC 1 cut(s) 59
BisI GCNGC 1 cut(s) 306
BlsI GCNGC 1 cut(s) 307
BmrI ACTGGG 1 cut(s) 267
BmsI GCATC 1 cut(s) 113
BmuI ACTGGG 1 cut(s) 267
Bpu10I CCTNAGC 1 cut(s) 61
BsaI GGTCTC 1 cut(s) 327
Bsc4I CCNNNNNNNGG 1 cut(s) 76
Bse1I ACTGG 1 cut(s) 262
BseLI CCNNNNNNNGG 1 cut(s) 76
BseNI ACTGG 1 cut(s) 262
BseXI GCAGC 1 cut(s) 317
BslFI GGGAC 1 cut(s) 83
BslI CCNNNNNNNGG 1 cut(s) 76
BsmAI GTCTC 1 cut(s) 327
BsmFI GGGAC 1 cut(s) 83
Bso31I GGTCTC 1 cut(s) 327
Bsp143I GATC 1 cut(s) 217
BspQI GCTCTTC 1 cut(s) 297
BspTNI GGTCTC 1 cut(s) 327
BsrI ACTGG 1 cut(s) 262
BssMI GATC 1 cut(s) 217
Bst6I CTCTTC 1 cut(s) 297
BstC8I GCNNGC 1 cut(s) 25
BstDEI CTNAG 1 cut(s) 61
BstKTI GATC 1 cut(s) 220
BstMAI GTCTC 1 cut(s) 327
BstMBI GATC 1 cut(s) 217
BstMWI GCNNNNNNNGC 2 cut(s) 296, 305
BstNSI RCATGY 1 cut(s) 203
BstV1I GCAGC 1 cut(s) 317
BsuI GTATCC 1 cut(s) 59
BtsIMutI CAGTG 1 cut(s) 255
Cac8I GCNNGC 1 cut(s) 25
CviAII CATG 3 cut(s) 16, 41, 200
CviJI RGCY 6 cut(s) 23, 139, 157, 278, 299, 308
CviKI_1 RGCY 6 cut(s) 23, 139, 157, 278, 299, 308
DdeI CTNAG 1 cut(s) 61
DpnI GATC 1 cut(s) 219
DpnII GATC 1 cut(s) 217
Eam1104I CTCTTC 1 cut(s) 297
EarI CTCTTC 1 cut(s) 297
Eco31I GGTCTC 1 cut(s) 327
Eco57I CTGAAG 1 cut(s) 30
FaeI CATG 3 cut(s) 19, 44, 203
FaiI YATR 4 cut(s) 17, 42, 201, 302
FalI AAGNNNNNCTT 2 cut(s) 123, 155
FaqI GGGAC 1 cut(s) 83
FatI CATG 3 cut(s) 15, 40, 199
Fnu4HI GCNGC 1 cut(s) 306
Fsp4HI GCNGC 1 cut(s) 306
FspBI CTAG 3 cut(s) 126, 158, 189
GluI GCNGC 1 cut(s) 306
Hin1II CATG 3 cut(s) 19, 44, 203
HinfI GANTC 1 cut(s) 6
Hpy188I TCNGA 1 cut(s) 91
Hpy188III TCNNGA 2 cut(s) 229, 326
HpyAV CCTTC 4 cut(s) 231, 235, 323, 327
HpyCH4V TGCA 5 cut(s) 15, 27, 104, 199, 250
HpyF10VI GCNNNNNNNGC 2 cut(s) 296, 305
HpyF3I CTNAG 1 cut(s) 61
Hsp92II CATG 3 cut(s) 19, 44, 203
Kzo9I GATC 1 cut(s) 217
LguI GCTCTTC 1 cut(s) 297
LpnPI CCDG 2 cut(s) 114, 243
Lsp1109I GCAGC 1 cut(s) 317
LweI GCATC 1 cut(s) 113
MaeI CTAG 3 cut(s) 126, 158, 189
MalI GATC 1 cut(s) 219
MboI GATC 1 cut(s) 217
MboII GAAGA 3 cut(s) 44, 187, 284
MluCI AATT 1 cut(s) 55
MlyI GAGTC 1 cut(s) 15
MnlI CCTC 1 cut(s) 312
MroXI GAANNNNTTC 1 cut(s) 36
MwoI GCNNNNNNNGC 2 cut(s) 296, 305
NdeII GATC 1 cut(s) 217
NlaIII CATG 3 cut(s) 19, 44, 203
NspI RCATGY 1 cut(s) 203
PciSI GCTCTTC 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 36
PkrI GCNGC 1 cut(s) 307
PleI GAGTC 1 cut(s) 14
PpsI GAGTC 1 cut(s) 14
SapI GCTCTTC 1 cut(s) 297
SatI GCNGC 1 cut(s) 306
Sau3AI GATC 1 cut(s) 217
SchI GAGTC 1 cut(s) 15
SetI ASST 6 cut(s) 25, 81, 159, 280, 323, 338
SfaNI GCATC 1 cut(s) 113
Sse9I AATT 1 cut(s) 55
SspMI CTAG 3 cut(s) 126, 158, 189
TasI AATT 1 cut(s) 55
TscAI CASTG 1 cut(s) 262
TseI GCWGC 1 cut(s) 305
TspDTI ATGAA 3 cut(s) 29, 194, 288
TspRI CASTG 1 cut(s) 262
XceI RCATGY 1 cut(s) 203
XmnI GAANNNNTTC 1 cut(s) 36
XspI CTAG 3 cut(s) 126, 158, 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.