Prupe.5G117200_v2.0.a1

KAT8 regulatory NSL complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0007737
Physical Location & Seq
Reverse (-)
11878968 .. 11883712
4745 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G117200.1

Sequence Viewer

Length: 783 bp
ATGGCTTCATCACCCCCTTCAAAACGCAGGCGTAAGGACCAGAGCAAAGACGATGCAAACGACATGTCAGCAACATCTTCATCCACACTGGAGAAATTATCCCCTGTGGTGGTCTTTGCTCATGGTGCTGGTGCTCCCTCTTCTTCTGACTGGATGATCAGGTGGAAGGATATGTTGGGAAAAGCACTACATGCTGTTGAAGTTGTTACCTTTGATTACCCATACATTTCGGGTGGGAAAAGGAGGGCCCCTCCGAAGGCTGAAAAGTTGGTCGACTTTCACGCCGATGTTGTCGGAAAGGCTGTTGCTAAATACCCGGGTCATCCGTTGATTTTGGCCGGGAAATCTATGGGTTCAAGGGTCAGCTGTATGGTAGCTTGCAAGGAAGGCATTCGTGCTTCAGCAATACTTTGCTTAGGATACCCGCTAAAGGGAATTAATGGAGCAGTGCGAGATGAAATACTTTTGCAACTTTCTGTTCCCATAATGCTAGTACAGGGTAGTAAAGATGCGCTCTGTCCATTGGAAAAGCTAGAAGTTACACGCAAGAAGATGAAATGCCCTAGTGGTTTGCATGTGATTGATGGTGGTGACCACTCCTTCAAGATTGGAAAGAAGCATCTGCAAACCACTGGGTTAACGCAAGACGAAGCTGAAGATCTTGCTCTTCAGGCCCTAGCATCCTTTTTGTCAGGGTCTCTTGGAGAAAGATGTGACTTCCTCTTCGAATGGCCTGATTTGGTGAGAAACCTAGCTACCTTGGGGACCTACACCAATCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_5 Abhydrolase_6 DLH

Protein Analysis

261

Amino Acids

28.09

Weight (kDa)

8.95

Isoelectric Point (pI)

47.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 273
AciI CCGC 1 cut(s) 425
AcoI YGGCCR 1 cut(s) 336
AcuI CTGAAG 3 cut(s) 384, 653, 675
AfaI GTAC 1 cut(s) 495
AfiI CCNNNNNNNGG 4 cut(s) 109, 256, 430, 431
AflIII ACRYGT 1 cut(s) 63
AgsI TTSAA 4 cut(s) 21, 200, 357, 604
AjuI GAANNNNNNNTTGG 2 cut(s) 158, 190
AluBI AGCT 5 cut(s) 366, 377, 532, 653, 755
AluI AGCT 5 cut(s) 366, 377, 532, 653, 755
Alw21I GWGCWC 1 cut(s) 136
Alw26I GTCTC 1 cut(s) 702
Ama87I CYCGRG 1 cut(s) 316
AoxI GGCC 4 cut(s) 246, 336, 672, 731
ApaI GGGCCC 1 cut(s) 250
ArsI GACNNNNNNTTYG 4 cut(s) 50, 82, 707, 739
AseI ATTAAT 1 cut(s) 438
Asp700I GAANNNNTTC 1 cut(s) 390
AspLEI GCGC 1 cut(s) 514
AspS9I GGNCC 5 cut(s) 37, 246, 247, 673, 765
AsuC2I CCSGG 3 cut(s) 317, 318, 340
AsuHPI GGTGA 3 cut(s) 3, 602, 754
AsuII TTCGAA 1 cut(s) 726
AvaI CYCGRG 1 cut(s) 316
AvaII GGWCC 2 cut(s) 37, 765
BaeGI GKGCMC 1 cut(s) 250
BanII GRGCYC 1 cut(s) 250
Bbv12I GWGCWC 1 cut(s) 136
BccI CCATC 1 cut(s) 578
BciVI GTATCC 1 cut(s) 413
BclI TGATCA 1 cut(s) 156
BcnI CCSGG 3 cut(s) 317, 318, 340
BcoDI GTCTC 1 cut(s) 702
BfaI CTAG 5 cut(s) 491, 533, 564, 677, 752
BfuI GTATCC 1 cut(s) 413
BglII AGATCT 1 cut(s) 658
Bme1390I CCNGG 3 cut(s) 317, 318, 340
Bme18I GGWCC 2 cut(s) 37, 765
BmeT110I CYCGRG 1 cut(s) 316
BmgT120I GGNCC 5 cut(s) 37, 246, 247, 673, 765
BmiI GGNNCC 3 cut(s) 248, 249, 766
BmrFI CCNGG 3 cut(s) 317, 318, 340
BmrI ACTGGG 1 cut(s) 642
BmsI GCATC 4 cut(s) 43, 499, 628, 689
BmuI ACTGGG 1 cut(s) 642
BplI GAGNNNNNCTC 2 cut(s) 235, 267
BpmI CTGGAG 1 cut(s) 110
Bpu10I CCTNAGC 1 cut(s) 415
Bpu14I TTCGAA 1 cut(s) 726
BpuMI CCSGG 3 cut(s) 317, 318, 340
BsaI GGTCTC 1 cut(s) 702
BsaJI CCNNGG 2 cut(s) 316, 759
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 256, 430, 431
Bse1I ACTGG 3 cut(s) 93, 155, 637
BseDI CCNNGG 2 cut(s) 316, 759
BseGI GGATG 4 cut(s) 80, 159, 322, 680
BseLI CCNNNNNNNGG 4 cut(s) 109, 256, 430, 431
BseNI ACTGG 3 cut(s) 93, 155, 637
BseSI GKGCMC 1 cut(s) 250
BshFI GGCC 4 cut(s) 248, 338, 674, 733
BsiHKAI GWGCWC 1 cut(s) 136
BsiHKCI CYCGRG 1 cut(s) 316
BsiSI CCGG 2 cut(s) 317, 339
BslFI GGGAC 1 cut(s) 778
BslI CCNNNNNNNGG 4 cut(s) 109, 256, 430, 431
BsmAI GTCTC 1 cut(s) 702
BsmFI GGGAC 1 cut(s) 778
BsmI GAATGC 1 cut(s) 390
BsnI GGCC 4 cut(s) 248, 338, 674, 733
Bso31I GGTCTC 1 cut(s) 702
BsoBI CYCGRG 1 cut(s) 316
Bsp119I TTCGAA 1 cut(s) 726
Bsp120I GGGCCC 1 cut(s) 246
Bsp1286I GDGCHC 2 cut(s) 136, 250
Bsp143I GATC 2 cut(s) 156, 658
BspACI CCGC 1 cut(s) 425
BspANI GGCC 4 cut(s) 248, 338, 674, 733
BspLI GGNNCC 3 cut(s) 248, 249, 766
BspQI GCTCTTC 1 cut(s) 672
BspT104I TTCGAA 1 cut(s) 726
BspTNI GGTCTC 1 cut(s) 702
BsrI ACTGG 3 cut(s) 93, 155, 637
BssECI CCNNGG 2 cut(s) 316, 759
BssMI GATC 2 cut(s) 156, 658
BssT1I CCWWGG 1 cut(s) 759
Bst6I CTCTTC 3 cut(s) 145, 672, 728
BstAPI GCANNNNNTGC 1 cut(s) 191
BstBI TTCGAA 1 cut(s) 726
BstC8I GCNNGC 2 cut(s) 29, 379
BstDEI CTNAG 1 cut(s) 415
BstEII GGTNACC 1 cut(s) 590
BstF5I GGATG 4 cut(s) 80, 159, 322, 680
BstHHI GCGC 1 cut(s) 514
BstKTI GATC 2 cut(s) 159, 661
BstMAI GTCTC 1 cut(s) 702
BstMBI GATC 2 cut(s) 156, 658
BstMWI GCNNNNNNNGC 4 cut(s) 125, 191, 387, 671
BstNSI RCATGY 3 cut(s) 67, 194, 578
BstPI GGTNACC 1 cut(s) 590
BstSCI CCNGG 3 cut(s) 315, 316, 338
BstSLI GKGCMC 1 cut(s) 250
BstX2I RGATCY 1 cut(s) 658
BstYI RGATCY 1 cut(s) 658
BsuI GTATCC 1 cut(s) 413
BsuRI GGCC 4 cut(s) 248, 338, 674, 733
BtsCI GGATG 4 cut(s) 80, 159, 322, 680
BtsI GCAGTG 1 cut(s) 453
BtsIMutI CAGTG 3 cut(s) 86, 453, 630
Cac8I GCNNGC 2 cut(s) 29, 379
CfoI GCGC 1 cut(s) 514
Cfr13I GGNCC 5 cut(s) 37, 246, 247, 673, 765
Cfr9I CCCGGG 1 cut(s) 316
Csp6I GTAC 1 cut(s) 494
CviAII CATG 4 cut(s) 64, 122, 191, 575
CviQI GTAC 1 cut(s) 494
DdeI CTNAG 1 cut(s) 415
DpnI GATC 2 cut(s) 158, 660
DpnII GATC 2 cut(s) 156, 658
EaeI YGGCCR 1 cut(s) 336
Eam1104I CTCTTC 3 cut(s) 145, 672, 728
EarI CTCTTC 3 cut(s) 145, 672, 728
Eco130I CCWWGG 1 cut(s) 759
Eco24I GRGCYC 1 cut(s) 250
Eco31I GGTCTC 1 cut(s) 702
Eco47I GGWCC 2 cut(s) 37, 765
Eco57I CTGAAG 3 cut(s) 384, 653, 675
Eco88I CYCGRG 1 cut(s) 316
Eco91I GGTNACC 1 cut(s) 590
EcoO109I RGGNCCY 4 cut(s) 246, 247, 673, 765
EcoO65I GGTNACC 1 cut(s) 590
EcoT14I CCWWGG 1 cut(s) 759
EcoT38I GRGCYC 1 cut(s) 250
ErhI CCWWGG 1 cut(s) 759
FaeI CATG 4 cut(s) 67, 125, 194, 578
FaiI YATR 9 cut(s) 65, 123, 173, 192, 223, 350, 371, 485, 576
FaqI GGGAC 1 cut(s) 778
FatI CATG 4 cut(s) 63, 121, 190, 574
FauI CCCGC 1 cut(s) 432
FbaI TGATCA 1 cut(s) 156
FblI GTMKAC 1 cut(s) 273
FokI GGATG 4 cut(s) 67, 166, 309, 667
FriOI GRGCYC 1 cut(s) 250
FspBI CTAG 5 cut(s) 491, 533, 564, 677, 752
GlaI GCGC 1 cut(s) 513
GsuI CTGGAG 1 cut(s) 110
HaeIII GGCC 4 cut(s) 248, 338, 674, 733
HapII CCGG 2 cut(s) 317, 339
HhaI GCGC 1 cut(s) 514
Hin1II CATG 4 cut(s) 67, 125, 194, 578
Hin6I GCGC 1 cut(s) 512
HinP1I GCGC 1 cut(s) 512
HincII GTYRAC 2 cut(s) 274, 639
HindII GTYRAC 2 cut(s) 274, 639
HpaI GTTAAC 1 cut(s) 639
HpaII CCGG 2 cut(s) 317, 339
HphI GGTGA 3 cut(s) 3, 602, 754
Hpy166II GTNNAC 2 cut(s) 274, 639
Hpy188I TCNGA 3 cut(s) 148, 255, 296
Hpy188III TCNNGA 1 cut(s) 604
Hpy8I GTNNAC 2 cut(s) 274, 639
HpyAV CCTTC 5 cut(s) 27, 160, 250, 380, 610
HpyCH4V TGCA 5 cut(s) 56, 381, 469, 574, 625
HpyF10VI GCNNNNNNNGC 4 cut(s) 125, 191, 387, 671
HpyF3I CTNAG 1 cut(s) 415
Hsp92II CATG 4 cut(s) 67, 125, 194, 578
HspAI GCGC 1 cut(s) 512
Ksp22I TGATCA 1 cut(s) 156
KspAI GTTAAC 1 cut(s) 639
Kzo9I GATC 2 cut(s) 156, 658
LguI GCTCTTC 1 cut(s) 672
LmnI GCTCC 2 cut(s) 139, 443
LweI GCATC 4 cut(s) 43, 499, 628, 689
MaeI CTAG 5 cut(s) 491, 533, 564, 677, 752
MaeIII GTNAC 4 cut(s) 205, 538, 590, 713
MalI GATC 2 cut(s) 158, 660
MboI GATC 2 cut(s) 156, 658
MboII GAAGA 7 cut(s) 69, 132, 135, 562, 659, 668, 715
MflI RGATCY 1 cut(s) 658
MhlI GDGCHC 2 cut(s) 136, 250
MluCI AATT 2 cut(s) 95, 435
MmeI TCCRAC 1 cut(s) 274
MnlI CCTC 4 cut(s) 148, 237, 261, 731
MroXI GAANNNNTTC 1 cut(s) 390
MseI TTAA 2 cut(s) 438, 638
MslI CAYNNNNRTG 1 cut(s) 285
MspA1I CMGCKG 1 cut(s) 366
MspI CCGG 2 cut(s) 317, 339
MspR9I CCNGG 3 cut(s) 317, 318, 340
Mva1269I GAATGC 1 cut(s) 390
MwoI GCNNNNNNNGC 4 cut(s) 125, 191, 387, 671
NciI CCSGG 3 cut(s) 317, 318, 340
NdeII GATC 2 cut(s) 156, 658
NlaIII CATG 4 cut(s) 67, 125, 194, 578
NlaIV GGNNCC 3 cut(s) 248, 249, 766
NmuCI GTSAC 2 cut(s) 590, 713
NspI RCATGY 3 cut(s) 67, 194, 578
NspV TTCGAA 1 cut(s) 726
PciI ACATGT 1 cut(s) 63
PciSI GCTCTTC 1 cut(s) 672
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PctI GAATGC 1 cut(s) 390
PdmI GAANNNNTTC 1 cut(s) 390
PpuMI RGGWCCY 1 cut(s) 765
PscI ACATGT 1 cut(s) 63
PshBI ATTAAT 1 cut(s) 438
Psp5II RGGWCCY 1 cut(s) 765
PspEI GGTNACC 1 cut(s) 590
PspN4I GGNNCC 3 cut(s) 248, 249, 766
PspOMI GGGCCC 1 cut(s) 246
PspPI GGNCC 5 cut(s) 37, 246, 247, 673, 765
PspPPI RGGWCCY 1 cut(s) 765
PsuI RGATCY 1 cut(s) 658
PvuII CAGCTG 1 cut(s) 366
RsaI GTAC 1 cut(s) 495
RsaNI GTAC 1 cut(s) 494
RseI CAYNNNNRTG 1 cut(s) 285
SalI GTCGAC 1 cut(s) 272
SapI GCTCTTC 1 cut(s) 672
SaqAI TTAA 2 cut(s) 438, 638
Sau3AI GATC 2 cut(s) 156, 658
Sau96I GGNCC 5 cut(s) 37, 246, 247, 673, 765
ScrFI CCNGG 3 cut(s) 317, 318, 340
SduI GDGCHC 2 cut(s) 136, 250
SfaNI GCATC 4 cut(s) 43, 499, 628, 689
SfuI TTCGAA 1 cut(s) 726
SinI GGWCC 2 cut(s) 37, 765
SmaI CCCGGG 1 cut(s) 318
SmiMI CAYNNNNRTG 1 cut(s) 285
Sse9I AATT 2 cut(s) 95, 435
SsiI CCGC 1 cut(s) 425
SspMI CTAG 5 cut(s) 491, 533, 564, 677, 752
StyD4I CCNGG 3 cut(s) 315, 316, 338
StyI CCWWGG 1 cut(s) 759
TaqI TCGA 2 cut(s) 273, 726
TasI AATT 2 cut(s) 95, 435
TatI WGTACW 1 cut(s) 493
Tru1I TTAA 2 cut(s) 438, 638
Tru9I TTAA 2 cut(s) 438, 638
TscAI CASTG 3 cut(s) 93, 453, 637
TseFI GTSAC 2 cut(s) 590, 713
Tsp45I GTSAC 2 cut(s) 590, 713
TspDTI ATGAA 3 cut(s) 69, 471, 569
TspGWI ACGGA 1 cut(s) 315
TspMI CCCGGG 1 cut(s) 316
TspRI CASTG 3 cut(s) 93, 453, 637
VpaK11BI GGWCC 2 cut(s) 37, 765
VspI ATTAAT 1 cut(s) 438
XceI RCATGY 3 cut(s) 67, 194, 578
XmaI CCCGGG 1 cut(s) 316
XmiI GTMKAC 1 cut(s) 273
XmnI GAANNNNTTC 1 cut(s) 390
XspI CTAG 5 cut(s) 491, 533, 564, 677, 752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.