Peroxisomal membrane protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62810 |
| fragaria_vesca | FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 |
| malus_domestica | MD06G1174100.v1.1 MD14G1180600.v1.1 |
| prunus_persica | Prupe.5G174100_v2.0.a1 Prupe.5G174100_v2.0.a1 Prupe.5G174100_v2.0.a1 |
| pyrus_communis | pycom06g15540 pycom14g15060 |
| rosa_chinensis | RchiOBHm_Chr7g0193581 |
| rosa_laevigata | RLG00000004261 |
| rosa_multiflora | Rmu_ssc0000035.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00261990 |
| rosa_rugosa | Rorug07G0010300 Rorug07G0010400 Rorug07G0010500 Rorug07G0010500 |
| rosa_samantha | Rh7AG137300 Rh7BG137500 Rh7CG140800 Rh7DG138600 |
| rosa_wichuraiana | Rw7G011690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1139 |
| AccB1I | GGYRCC | 1 cut(s) | 940 |
| AccII | CGCG | 1 cut(s) | 1087 |
| AciI | CCGC | 6 cut(s) | 252, 488, 507, 1087, 1105, 1424 |
| AcoI | YGGCCR | 2 cut(s) | 846, 1262 |
| AcsI | RAATTY | 5 cut(s) | 32, 302, 553, 721, 1027 |
| AcuI | CTGAAG | 3 cut(s) | 138, 983, 1269 |
| AdeI | CACNNNGTG | 1 cut(s) | 583 |
| AfaI | GTAC | 6 cut(s) | 160, 774, 855, 996, 1078, 1201 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 155, 570, 1260, 1346 |
| AgsI | TTSAA | 4 cut(s) | 400, 446, 726, 1027 |
| AjiI | CACGTC | 1 cut(s) | 763 |
| AjnI | CCWGG | 1 cut(s) | 540 |
| Alw21I | GWGCWC | 1 cut(s) | 1399 |
| Alw26I | GTCTC | 2 cut(s) | 107, 1008 |
| Alw44I | GTGCAC | 1 cut(s) | 1395 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1247 |
| Ama87I | CYCGRG | 2 cut(s) | 89, 985 |
| AoxI | GGCC | 4 cut(s) | 846, 972, 1262, 1336 |
| ApaLI | GTGCAC | 1 cut(s) | 1395 |
| ApoI | RAATTY | 5 cut(s) | 32, 302, 553, 721, 1027 |
| AseI | ATTAAT | 1 cut(s) | 371 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 129, 578 |
| AspLEI | GCGC | 1 cut(s) | 768 |
| AspS9I | GGNCC | 3 cut(s) | 973, 1337, 1350 |
| AsuHPI | GGTGA | 6 cut(s) | 205, 240, 812, 891, 1082, 1413 |
| AvaI | CYCGRG | 2 cut(s) | 89, 985 |
| AvaII | GGWCC | 1 cut(s) | 1350 |
| BaeGI | GKGCMC | 1 cut(s) | 1399 |
| BalI | TGGCCA | 1 cut(s) | 848 |
| BanI | GGYRCC | 1 cut(s) | 940 |
| BanII | GRGCYC | 3 cut(s) | 62, 1053, 1433 |
| BbsI | GAAGAC | 2 cut(s) | 203, 705 |
| Bbv12I | GWGCWC | 1 cut(s) | 1399 |
| BccI | CCATC | 6 cut(s) | 179, 814, 1262, 1327, 1328, 1348 |
| BceAI | ACGGC | 3 cut(s) | 229, 305, 1277 |
| BciT130I | CCWGG | 1 cut(s) | 542 |
| BciVI | GTATCC | 1 cut(s) | 402 |
| BclI | TGATCA | 1 cut(s) | 691 |
| BcoDI | GTCTC | 2 cut(s) | 107, 1008 |
| BfaI | CTAG | 3 cut(s) | 393, 945, 1170 |
| BfmI | CTRYAG | 1 cut(s) | 513 |
| BfuI | GTATCC | 1 cut(s) | 402 |
| BlpI | GCTNAGC | 1 cut(s) | 951 |
| BmcAI | AGTACT | 1 cut(s) | 996 |
| Bme1390I | CCNGG | 1 cut(s) | 542 |
| Bme18I | GGWCC | 1 cut(s) | 1350 |
| BmeT110I | CYCGRG | 2 cut(s) | 89, 985 |
| BmgBI | CACGTC | 1 cut(s) | 763 |
| BmgT120I | GGNCC | 3 cut(s) | 973, 1337, 1350 |
| BmiI | GGNNCC | 4 cut(s) | 804, 942, 1209, 1351 |
| BmrFI | CCNGG | 1 cut(s) | 542 |
| BmrI | ACTGGG | 1 cut(s) | 1220 |
| BmsI | GCATC | 3 cut(s) | 307, 527, 803 |
| BmuI | ACTGGG | 1 cut(s) | 1220 |
| BpiI | GAAGAC | 2 cut(s) | 203, 705 |
| BpmI | CTGGAG | 1 cut(s) | 1410 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 951 |
| BpuEI | CTTGAG | 2 cut(s) | 658, 990 |
| BsaAI | YACGTR | 1 cut(s) | 413 |
| BsaI | GGTCTC | 1 cut(s) | 107 |
| BsaJI | CCNNGG | 2 cut(s) | 849, 956 |
| BsaWI | WCCGGW | 1 cut(s) | 1399 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 351, 381 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 155, 570, 1260, 1346 |
| Bse1I | ACTGG | 5 cut(s) | 178, 1181, 1190, 1226, 1274 |
| Bse3DI | GCAATG | 1 cut(s) | 1239 |
| BseBI | CCWGG | 1 cut(s) | 542 |
| BseDI | CCNNGG | 2 cut(s) | 849, 956 |
| BseGI | GGATG | 2 cut(s) | 1254, 1315 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 155, 570, 1260, 1346 |
| BseMI | GCAATG | 1 cut(s) | 1239 |
| BseMII | CTCAG | 3 cut(s) | 783, 1116, 1431 |
| BseNI | ACTGG | 5 cut(s) | 178, 1181, 1190, 1226, 1274 |
| BseSI | GKGCMC | 1 cut(s) | 1399 |
| BseYI | CCCAGC | 3 cut(s) | 1215, 1291, 1426 |
| BsgI | GTGCAG | 2 cut(s) | 798, 1298 |
| Bsh1236I | CGCG | 1 cut(s) | 1087 |
| BshFI | GGCC | 4 cut(s) | 848, 974, 1264, 1338 |
| BshNI | GGYRCC | 1 cut(s) | 940 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1399 |
| BsiHKCI | CYCGRG | 2 cut(s) | 89, 985 |
| BsiSI | CCGG | 1 cut(s) | 1400 |
| BslFI | GGGAC | 1 cut(s) | 1363 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 155, 570, 1260, 1346 |
| BsmAI | GTCTC | 2 cut(s) | 107, 1008 |
| BsmFI | GGGAC | 1 cut(s) | 1363 |
| BsmI | GAATGC | 1 cut(s) | 1035 |
| BsnI | GGCC | 4 cut(s) | 848, 974, 1264, 1338 |
| Bso31I | GGTCTC | 1 cut(s) | 107 |
| BsoBI | CYCGRG | 2 cut(s) | 89, 985 |
| Bsp1286I | GDGCHC | 4 cut(s) | 62, 1053, 1399, 1433 |
| Bsp143I | GATC | 2 cut(s) | 691, 1300 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 951 |
| Bsp19I | CCATGG | 1 cut(s) | 849 |
| BspACI | CCGC | 6 cut(s) | 252, 488, 507, 1087, 1105, 1424 |
| BspANI | GGCC | 4 cut(s) | 848, 974, 1264, 1338 |
| BspCNI | CTCAG | 3 cut(s) | 782, 1117, 1432 |
| BspFNI | CGCG | 1 cut(s) | 1087 |
| BspHI | TCATGA | 2 cut(s) | 591, 694 |
| BspLI | GGNNCC | 4 cut(s) | 804, 942, 1209, 1351 |
| BspMAI | CTGCAG | 1 cut(s) | 517 |
| BspT107I | GGYRCC | 1 cut(s) | 940 |
| BspTNI | GGTCTC | 1 cut(s) | 107 |
| BsrDI | GCAATG | 1 cut(s) | 1239 |
| BsrI | ACTGG | 5 cut(s) | 178, 1181, 1190, 1226, 1274 |
| BssECI | CCNNGG | 2 cut(s) | 849, 956 |
| BssMI | GATC | 2 cut(s) | 691, 1300 |
| BssT1I | CCWWGG | 2 cut(s) | 849, 956 |
| Bst2UI | CCWGG | 1 cut(s) | 542 |
| Bst4CI | ACNGT | 4 cut(s) | 81, 1070, 1076, 1081 |
| Bst6I | CTCTTC | 3 cut(s) | 108, 561, 1446 |
| BstBAI | YACGTR | 1 cut(s) | 413 |
| BstC8I | GCNNGC | 1 cut(s) | 165 |
| BstDEI | CTNAG | 5 cut(s) | 558, 769, 951, 1125, 1440 |
| BstDSI | CCRYGG | 1 cut(s) | 849 |
| BstF5I | GGATG | 2 cut(s) | 1254, 1315 |
| BstFNI | CGCG | 1 cut(s) | 1087 |
| BstHHI | GCGC | 1 cut(s) | 768 |
| BstKTI | GATC | 2 cut(s) | 694, 1303 |
| BstMAI | GTCTC | 2 cut(s) | 107, 1008 |
| BstMBI | GATC | 2 cut(s) | 691, 1300 |
| BstNI | CCWGG | 1 cut(s) | 542 |
| BstSCI | CCNGG | 1 cut(s) | 540 |
| BstSFI | CTRYAG | 1 cut(s) | 513 |
| BstSLI | GKGCMC | 1 cut(s) | 1399 |
| BstSNI | TACGTA | 1 cut(s) | 413 |
| BstUI | CGCG | 1 cut(s) | 1087 |
| BstV2I | GAAGAC | 2 cut(s) | 203, 705 |
| BsuI | GTATCC | 1 cut(s) | 402 |
| BsuRI | GGCC | 4 cut(s) | 848, 974, 1264, 1338 |
| BtgI | CCRYGG | 1 cut(s) | 849 |
| BtgZI | GCGATG | 2 cut(s) | 694, 1326 |
| BtrI | CACGTC | 1 cut(s) | 763 |
| BtsCI | GGATG | 2 cut(s) | 1254, 1315 |
| BtsI | GCAGTG | 2 cut(s) | 783, 1021 |
| BtsIMutI | CAGTG | 4 cut(s) | 783, 1021, 1086, 1281 |
| Cac8I | GCNNGC | 1 cut(s) | 165 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1247 |
| CciI | TCATGA | 2 cut(s) | 591, 694 |
| CfoI | GCGC | 1 cut(s) | 768 |
| Cfr13I | GGNCC | 3 cut(s) | 973, 1337, 1350 |
| Csp6I | GTAC | 6 cut(s) | 159, 773, 854, 995, 1077, 1200 |
| CviAII | CATG | 5 cut(s) | 592, 695, 844, 850, 1203 |
| CviQI | GTAC | 6 cut(s) | 159, 773, 854, 995, 1077, 1200 |
| DdeI | CTNAG | 5 cut(s) | 558, 769, 951, 1125, 1440 |
| DpnI | GATC | 2 cut(s) | 693, 1302 |
| DpnII | GATC | 2 cut(s) | 691, 1300 |
| DraIII | CACNNNGTG | 1 cut(s) | 583 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1139 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1139 |
| EaeI | YGGCCR | 2 cut(s) | 846, 1262 |
| Eam1104I | CTCTTC | 3 cut(s) | 108, 561, 1446 |
| EarI | CTCTTC | 3 cut(s) | 108, 561, 1446 |
| Eco105I | TACGTA | 1 cut(s) | 413 |
| Eco130I | CCWWGG | 2 cut(s) | 849, 956 |
| Eco24I | GRGCYC | 3 cut(s) | 62, 1053, 1433 |
| Eco31I | GGTCTC | 1 cut(s) | 107 |
| Eco32I | GATATC | 1 cut(s) | 841 |
| Eco47I | GGWCC | 1 cut(s) | 1350 |
| Eco57I | CTGAAG | 3 cut(s) | 138, 983, 1269 |
| Eco88I | CYCGRG | 2 cut(s) | 89, 985 |
| EcoRI | GAATTC | 2 cut(s) | 553, 1027 |
| EcoRII | CCWGG | 1 cut(s) | 540 |
| EcoRV | GATATC | 1 cut(s) | 841 |
| EcoT14I | CCWWGG | 2 cut(s) | 849, 956 |
| EcoT38I | GRGCYC | 3 cut(s) | 62, 1053, 1433 |
| ErhI | CCWWGG | 2 cut(s) | 849, 956 |
| FaeI | CATG | 5 cut(s) | 595, 698, 847, 853, 1206 |
| FaqI | GGGAC | 1 cut(s) | 1363 |
| FatI | CATG | 5 cut(s) | 591, 694, 843, 849, 1202 |
| FauI | CCCGC | 1 cut(s) | 259 |
| FbaI | TGATCA | 1 cut(s) | 691 |
| FokI | GGATG | 2 cut(s) | 1241, 1302 |
| FriOI | GRGCYC | 3 cut(s) | 62, 1053, 1433 |
| FspBI | CTAG | 3 cut(s) | 393, 945, 1170 |
| GlaI | GCGC | 1 cut(s) | 767 |
| GsaI | CCCAGC | 3 cut(s) | 1219, 1295, 1430 |
| GsuI | CTGGAG | 1 cut(s) | 1410 |
| HaeIII | GGCC | 4 cut(s) | 848, 974, 1264, 1338 |
| HapII | CCGG | 1 cut(s) | 1400 |
| HhaI | GCGC | 1 cut(s) | 768 |
| Hin1II | CATG | 5 cut(s) | 595, 698, 847, 853, 1206 |
| Hin6I | GCGC | 1 cut(s) | 766 |
| HinP1I | GCGC | 1 cut(s) | 766 |
| HinfI | GANTC | 3 cut(s) | 336, 896, 1385 |
| HpaII | CCGG | 1 cut(s) | 1400 |
| HphI | GGTGA | 6 cut(s) | 205, 240, 812, 891, 1082, 1413 |
| Hpy166II | GTNNAC | 2 cut(s) | 73, 1397 |
| Hpy188I | TCNGA | 3 cut(s) | 523, 1259, 1324 |
| Hpy188III | TCNNGA | 8 cut(s) | 89, 91, 182, 592, 675, 695, 1040, 1389 |
| Hpy8I | GTNNAC | 2 cut(s) | 73, 1397 |
| Hpy99I | CGWCG | 1 cut(s) | 1263 |
| HpyAV | CCTTC | 5 cut(s) | 91, 162, 394, 650, 1013 |
| HpyCH4III | ACNGT | 4 cut(s) | 81, 1070, 1076, 1081 |
| HpyCH4IV | ACGT | 3 cut(s) | 412, 441, 762 |
| HpyF3I | CTNAG | 5 cut(s) | 558, 769, 951, 1125, 1440 |
| HpySE526I | ACGT | 3 cut(s) | 412, 441, 762 |
| Hsp92II | CATG | 5 cut(s) | 595, 698, 847, 853, 1206 |
| HspAI | GCGC | 1 cut(s) | 766 |
| Ksp22I | TGATCA | 1 cut(s) | 691 |
| Kzo9I | GATC | 2 cut(s) | 691, 1300 |
| LmnI | GCTCC | 3 cut(s) | 262, 359, 1402 |
| LweI | GCATC | 3 cut(s) | 307, 527, 803 |
| MaeI | CTAG | 3 cut(s) | 393, 945, 1170 |
| MaeII | ACGT | 3 cut(s) | 412, 441, 762 |
| MaeIII | GTNAC | 4 cut(s) | 246, 1070, 1295, 1327 |
| MalI | GATC | 2 cut(s) | 693, 1302 |
| MboI | GATC | 2 cut(s) | 691, 1300 |
| MboII | GAAGA | 9 cut(s) | 106, 125, 208, 440, 491, 578, 710, 771, 1463 |
| MhlI | GDGCHC | 4 cut(s) | 62, 1053, 1399, 1433 |
| MlsI | TGGCCA | 1 cut(s) | 848 |
| MluNI | TGGCCA | 1 cut(s) | 848 |
| MmeI | TCCRAC | 1 cut(s) | 1282 |
| Mox20I | TGGCCA | 1 cut(s) | 848 |
| MroXI | GAANNNNTTC | 2 cut(s) | 129, 578 |
| MscI | TGGCCA | 1 cut(s) | 848 |
| MseI | TTAA | 2 cut(s) | 371, 375 |
| MslI | CAYNNNNRTG | 1 cut(s) | 848 |
| Msp20I | TGGCCA | 1 cut(s) | 848 |
| MspA1I | CMGCKG | 8 cut(s) | 254, 365, 494, 512, 1105, 1247, 1291, 1426 |
| MspI | CCGG | 1 cut(s) | 1400 |
| MspR9I | CCNGG | 1 cut(s) | 542 |
| Mva1269I | GAATGC | 1 cut(s) | 1035 |
| MvaI | CCWGG | 1 cut(s) | 542 |
| MvnI | CGCG | 1 cut(s) | 1087 |
| NcoI | CCATGG | 1 cut(s) | 849 |
| NdeII | GATC | 2 cut(s) | 691, 1300 |
| NlaIII | CATG | 5 cut(s) | 595, 698, 847, 853, 1206 |
| NlaIV | GGNNCC | 4 cut(s) | 804, 942, 1209, 1351 |
| NmuCI | GTSAC | 3 cut(s) | 246, 1070, 1327 |
| PacI | TTAATTAA | 1 cut(s) | 375 |
| PaeR7I | CTCGAG | 2 cut(s) | 89, 985 |
| PagI | TCATGA | 2 cut(s) | 591, 694 |
| PctI | GAATGC | 1 cut(s) | 1035 |
| PdmI | GAANNNNTTC | 2 cut(s) | 129, 578 |
| PfeI | GAWTC | 3 cut(s) | 336, 896, 1385 |
| PflFI | GACNNNGTC | 1 cut(s) | 202 |
| PfoI | TCCNGGA | 1 cut(s) | 540 |
| Ppu21I | YACGTR | 1 cut(s) | 413 |
| PshBI | ATTAAT | 1 cut(s) | 371 |
| Psp6I | CCWGG | 1 cut(s) | 540 |
| PspFI | CCCAGC | 3 cut(s) | 1215, 1291, 1426 |
| PspGI | CCWGG | 1 cut(s) | 540 |
| PspN4I | GGNNCC | 4 cut(s) | 804, 942, 1209, 1351 |
| PspPI | GGNCC | 3 cut(s) | 973, 1337, 1350 |
| PspXI | VCTCGAGB | 1 cut(s) | 985 |
| PstI | CTGCAG | 1 cut(s) | 517 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1247 |
| PsyI | GACNNNGTC | 1 cut(s) | 202 |
| PvuII | CAGCTG | 5 cut(s) | 365, 494, 512, 1247, 1291 |
| RsaI | GTAC | 6 cut(s) | 160, 774, 855, 996, 1078, 1201 |
| RsaNI | GTAC | 6 cut(s) | 159, 773, 854, 995, 1077, 1200 |
| RseI | CAYNNNNRTG | 1 cut(s) | 848 |
| SaqAI | TTAA | 2 cut(s) | 371, 375 |
| Sau3AI | GATC | 2 cut(s) | 691, 1300 |
| Sau96I | GGNCC | 3 cut(s) | 973, 1337, 1350 |
| ScaI | AGTACT | 1 cut(s) | 996 |
| ScrFI | CCNGG | 1 cut(s) | 542 |
| SduI | GDGCHC | 4 cut(s) | 62, 1053, 1399, 1433 |
| SfaNI | GCATC | 3 cut(s) | 307, 527, 803 |
| SfcI | CTRYAG | 1 cut(s) | 513 |
| Sfr274I | CTCGAG | 2 cut(s) | 89, 985 |
| SinI | GGWCC | 1 cut(s) | 1350 |
| SlaI | CTCGAG | 2 cut(s) | 89, 985 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 848 |
| SmlI | CTYRAG | 4 cut(s) | 89, 673, 985, 1005 |
| SmoI | CTYRAG | 4 cut(s) | 89, 673, 985, 1005 |
| SnaBI | TACGTA | 1 cut(s) | 413 |
| SsiI | CCGC | 6 cut(s) | 252, 488, 507, 1087, 1105, 1424 |
| SspMI | CTAG | 3 cut(s) | 393, 945, 1170 |
| StyD4I | CCNGG | 1 cut(s) | 540 |
| StyI | CCWWGG | 2 cut(s) | 849, 956 |
| TaaI | ACNGT | 4 cut(s) | 81, 1070, 1076, 1081 |
| TaiI | ACGT | 3 cut(s) | 415, 444, 765 |
| TaqI | TCGA | 2 cut(s) | 90, 986 |
| TaqII | GACCGA | 3 cut(s) | 578, 1346, 1367 |
| TatI | WGTACW | 3 cut(s) | 772, 994, 1076 |
| TauI | GCSGC | 2 cut(s) | 491, 509 |
| TfiI | GAWTC | 3 cut(s) | 336, 896, 1385 |
| Tru1I | TTAA | 2 cut(s) | 371, 375 |
| Tru9I | TTAA | 2 cut(s) | 371, 375 |
| TscAI | CASTG | 4 cut(s) | 790, 1021, 1086, 1281 |
| TseFI | GTSAC | 3 cut(s) | 246, 1070, 1327 |
| Tsp45I | GTSAC | 3 cut(s) | 246, 1070, 1327 |
| TspDTI | ATGAA | 5 cut(s) | 138, 476, 638, 711, 1152 |
| TspGWI | ACGGA | 1 cut(s) | 661 |
| TspRI | CASTG | 4 cut(s) | 790, 1021, 1086, 1281 |
| Tth111I | GACNNNGTC | 1 cut(s) | 202 |
| VneI | GTGCAC | 1 cut(s) | 1395 |
| VpaK11BI | GGWCC | 1 cut(s) | 1350 |
| VspI | ATTAAT | 1 cut(s) | 371 |
| XapI | RAATTY | 5 cut(s) | 32, 302, 553, 721, 1027 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 649 |
| XhoI | CTCGAG | 2 cut(s) | 89, 985 |
| XmnI | GAANNNNTTC | 2 cut(s) | 129, 578 |
| XspI | CTAG | 3 cut(s) | 393, 945, 1170 |
| ZrmI | AGTACT | 1 cut(s) | 996 |