Peroxisomal membrane protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62810 |
| fragaria_vesca | FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 FvH4_5g05290 |
| malus_domestica | MD06G1174100.v1.1 MD14G1180600.v1.1 |
| prunus_persica | Prupe.5G174100_v2.0.a1 Prupe.5G174100_v2.0.a1 Prupe.5G174100_v2.0.a1 |
| pyrus_communis | pycom06g15540 pycom14g15060 |
| rosa_chinensis | RchiOBHm_Chr7g0193581 |
| rosa_laevigata | RLG00000004261 |
| rosa_multiflora | Rmu_ssc0000035.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00261990 |
| rosa_rugosa | Rorug07G0010300 Rorug07G0010400 Rorug07G0010500 Rorug07G0010500 |
| rosa_samantha | Rh7AG137300 Rh7BG137500 Rh7CG140800 Rh7DG138600 |
| rosa_wichuraiana | Rw7G011690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 389 |
| AccB1I | GGYRCC | 1 cut(s) | 389 |
| AccI | GTMKAC | 1 cut(s) | 814 |
| AciI | CCGC | 2 cut(s) | 599, 1201 |
| AcoI | YGGCCR | 2 cut(s) | 954, 1349 |
| AcsI | RAATTY | 3 cut(s) | 112, 661, 1510 |
| AcuI | CTGAAG | 4 cut(s) | 438, 693, 1117, 1356 |
| AfaI | GTAC | 5 cut(s) | 391, 516, 866, 963, 1405 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 399, 1347 |
| AgsI | TTSAA | 1 cut(s) | 351 |
| Alw21I | GWGCWC | 2 cut(s) | 286, 1145 |
| Alw26I | GTCTC | 1 cut(s) | 423 |
| Alw44I | GTGCAC | 1 cut(s) | 282 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 461, 899 |
| AoxI | GGCC | 5 cut(s) | 3, 777, 954, 1349, 1392 |
| ApaLI | GTGCAC | 1 cut(s) | 282 |
| ApoI | RAATTY | 3 cut(s) | 112, 661, 1510 |
| AseI | ATTAAT | 1 cut(s) | 443 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 252 |
| Asp718I | GGTACC | 1 cut(s) | 389 |
| AspLEI | GCGC | 2 cut(s) | 204, 876 |
| AspS9I | GGNCC | 2 cut(s) | 133, 777 |
| AsuHPI | GGTGA | 1 cut(s) | 1187 |
| AvaII | GGWCC | 1 cut(s) | 133 |
| BaeGI | GKGCMC | 1 cut(s) | 286 |
| BalI | TGGCCA | 1 cut(s) | 956 |
| BanI | GGYRCC | 1 cut(s) | 389 |
| BanII | GRGCYC | 2 cut(s) | 185, 1161 |
| BbsI | GAAGAC | 1 cut(s) | 329 |
| Bbv12I | GWGCWC | 2 cut(s) | 286, 1145 |
| BbvCI | CCTCAGC | 1 cut(s) | 48 |
| BccI | CCATC | 5 cut(s) | 106, 305, 1039, 1349, 1366 |
| BceAI | ACGGC | 2 cut(s) | 1364, 1379 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1239, 1273 |
| BclI | TGATCA | 2 cut(s) | 799, 1387 |
| BcoDI | GTCTC | 1 cut(s) | 423 |
| BfaI | CTAG | 4 cut(s) | 93, 372, 1053, 1254 |
| BfmI | CTRYAG | 6 cut(s) | 196, 435, 591, 612, 618, 1491 |
| BfoI | RGCGCY | 1 cut(s) | 205 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1195 |
| BlpI | GCTNAGC | 3 cut(s) | 54, 72, 1059 |
| Bme18I | GGWCC | 1 cut(s) | 133 |
| BmgT120I | GGNCC | 2 cut(s) | 133, 777 |
| BmiI | GGNNCC | 4 cut(s) | 391, 912, 1050, 1296 |
| BmrI | ACTGGG | 3 cut(s) | 567, 1206, 1307 |
| BmsI | GCATC | 1 cut(s) | 911 |
| BmuI | ACTGGG | 3 cut(s) | 567, 1206, 1307 |
| BpiI | GAAGAC | 1 cut(s) | 329 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1360, 1392 |
| BpmI | CTGGAG | 1 cut(s) | 1479 |
| Bpu10I | CCTNAGC | 3 cut(s) | 48, 81, 394 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 54, 72, 1059 |
| BpuEI | CTTGAG | 3 cut(s) | 233, 766, 1078 |
| BsaAI | YACGTR | 1 cut(s) | 1403 |
| BsaI | GGTCTC | 1 cut(s) | 423 |
| BsaJI | CCNNGG | 6 cut(s) | 15, 37, 497, 957, 1064, 1190 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 399, 1347 |
| Bse118I | RCCGGY | 1 cut(s) | 1276 |
| Bse1I | ACTGG | 4 cut(s) | 419, 573, 1212, 1313 |
| Bse3DI | GCAATG | 1 cut(s) | 1326 |
| BseDI | CCNNGG | 6 cut(s) | 15, 37, 497, 957, 1064, 1190 |
| BseGI | GGATG | 2 cut(s) | 541, 1341 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 399, 1347 |
| BseMI | GCAATG | 1 cut(s) | 1326 |
| BseMII | CTCAG | 6 cut(s) | 39, 63, 68, 906, 1443, 1521 |
| BseNI | ACTGG | 4 cut(s) | 419, 573, 1212, 1313 |
| BseRI | GAGGAG | 1 cut(s) | 251 |
| BseSI | GKGCMC | 1 cut(s) | 286 |
| BseYI | CCCAGC | 1 cut(s) | 1302 |
| BsgI | GTGCAG | 2 cut(s) | 906, 1385 |
| BshFI | GGCC | 5 cut(s) | 5, 779, 956, 1351, 1394 |
| BshNI | GGYRCC | 1 cut(s) | 389 |
| BsiHKAI | GWGCWC | 2 cut(s) | 286, 1145 |
| BsiSI | CCGG | 1 cut(s) | 1277 |
| BslFI | GGGAC | 1 cut(s) | 1096 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 399, 1347 |
| BsmAI | GTCTC | 1 cut(s) | 423 |
| BsmFI | GGGAC | 1 cut(s) | 1096 |
| BsmI | GAATGC | 2 cut(s) | 490, 1492 |
| BsnI | GGCC | 5 cut(s) | 5, 779, 956, 1351, 1394 |
| Bso31I | GGTCTC | 1 cut(s) | 423 |
| Bsp1286I | GDGCHC | 4 cut(s) | 185, 286, 1145, 1161 |
| Bsp143I | GATC | 3 cut(s) | 799, 948, 1387 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 54, 72, 1059 |
| Bsp19I | CCATGG | 1 cut(s) | 957 |
| BspACI | CCGC | 2 cut(s) | 599, 1201 |
| BspANI | GGCC | 5 cut(s) | 5, 779, 956, 1351, 1394 |
| BspCNI | CTCAG | 6 cut(s) | 40, 64, 67, 905, 1444, 1522 |
| BspLI | GGNNCC | 4 cut(s) | 391, 912, 1050, 1296 |
| BspMAI | CTGCAG | 4 cut(s) | 595, 616, 622, 1495 |
| BspQI | GCTCTTC | 1 cut(s) | 1536 |
| BspT107I | GGYRCC | 1 cut(s) | 389 |
| BspTNI | GGTCTC | 1 cut(s) | 423 |
| BsrDI | GCAATG | 1 cut(s) | 1326 |
| BsrFI | RCCGGY | 1 cut(s) | 1276 |
| BsrI | ACTGG | 4 cut(s) | 419, 573, 1212, 1313 |
| BssAI | RCCGGY | 1 cut(s) | 1276 |
| BssECI | CCNNGG | 6 cut(s) | 15, 37, 497, 957, 1064, 1190 |
| BssMI | GATC | 3 cut(s) | 799, 948, 1387 |
| BssT1I | CCWWGG | 4 cut(s) | 497, 957, 1064, 1190 |
| Bst4CI | ACNGT | 2 cut(s) | 915, 1181 |
| Bst6I | CTCTTC | 2 cut(s) | 669, 1536 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 296 |
| BstBAI | YACGTR | 1 cut(s) | 1403 |
| BstC8I | GCNNGC | 4 cut(s) | 369, 646, 1145, 1287 |
| BstDSI | CCRYGG | 1 cut(s) | 957 |
| BstF5I | GGATG | 2 cut(s) | 541, 1341 |
| BstH2I | RGCGCY | 1 cut(s) | 205 |
| BstHHI | GCGC | 2 cut(s) | 204, 876 |
| BstKTI | GATC | 3 cut(s) | 802, 951, 1390 |
| BstMAI | GTCTC | 1 cut(s) | 423 |
| BstMBI | GATC | 3 cut(s) | 799, 948, 1387 |
| BstNSI | RCATGY | 1 cut(s) | 874 |
| BstSFI | CTRYAG | 6 cut(s) | 196, 435, 591, 612, 618, 1491 |
| BstSLI | GKGCMC | 1 cut(s) | 286 |
| BstV2I | GAAGAC | 1 cut(s) | 329 |
| BsuRI | GGCC | 5 cut(s) | 5, 779, 956, 1351, 1394 |
| BtgI | CCRYGG | 1 cut(s) | 957 |
| BtsCI | GGATG | 2 cut(s) | 541, 1341 |
| BtsIMutI | CAGTG | 3 cut(s) | 412, 1191, 1368 |
| Cac8I | GCNNGC | 4 cut(s) | 369, 646, 1145, 1287 |
| CaiI | CAGNNNCTG | 2 cut(s) | 461, 899 |
| CfoI | GCGC | 2 cut(s) | 204, 876 |
| Cfr10I | RCCGGY | 1 cut(s) | 1276 |
| Cfr13I | GGNCC | 2 cut(s) | 133, 777 |
| Csp6I | GTAC | 5 cut(s) | 390, 515, 865, 962, 1404 |
| CviAII | CATG | 6 cut(s) | 422, 871, 952, 958, 1290, 1538 |
| CviQI | GTAC | 5 cut(s) | 390, 515, 865, 962, 1404 |
| DpnI | GATC | 3 cut(s) | 801, 950, 1389 |
| DpnII | GATC | 3 cut(s) | 799, 948, 1387 |
| DraI | TTTAAA | 1 cut(s) | 1170 |
| EaeI | YGGCCR | 2 cut(s) | 954, 1349 |
| Eam1104I | CTCTTC | 2 cut(s) | 669, 1536 |
| EarI | CTCTTC | 2 cut(s) | 669, 1536 |
| Eco130I | CCWWGG | 4 cut(s) | 497, 957, 1064, 1190 |
| Eco24I | GRGCYC | 2 cut(s) | 185, 1161 |
| Eco31I | GGTCTC | 1 cut(s) | 423 |
| Eco47I | GGWCC | 1 cut(s) | 133 |
| Eco57I | CTGAAG | 4 cut(s) | 438, 693, 1117, 1356 |
| EcoO109I | RGGNCCY | 1 cut(s) | 777 |
| EcoRI | GAATTC | 3 cut(s) | 112, 661, 1510 |
| EcoT14I | CCWWGG | 4 cut(s) | 497, 957, 1064, 1190 |
| EcoT38I | GRGCYC | 2 cut(s) | 185, 1161 |
| ErhI | CCWWGG | 4 cut(s) | 497, 957, 1064, 1190 |
| FaeI | CATG | 6 cut(s) | 425, 874, 955, 961, 1293, 1541 |
| FaqI | GGGAC | 1 cut(s) | 1096 |
| FatI | CATG | 6 cut(s) | 421, 870, 951, 957, 1289, 1537 |
| FbaI | TGATCA | 2 cut(s) | 799, 1387 |
| FblI | GTMKAC | 1 cut(s) | 814 |
| FokI | GGATG | 2 cut(s) | 548, 1328 |
| FriOI | GRGCYC | 2 cut(s) | 185, 1161 |
| FspBI | CTAG | 4 cut(s) | 93, 372, 1053, 1254 |
| GlaI | GCGC | 2 cut(s) | 203, 875 |
| GsaI | CCCAGC | 1 cut(s) | 1306 |
| GsuI | CTGGAG | 1 cut(s) | 1479 |
| HaeII | RGCGCY | 1 cut(s) | 205 |
| HaeIII | GGCC | 5 cut(s) | 5, 779, 956, 1351, 1394 |
| HapII | CCGG | 1 cut(s) | 1277 |
| HhaI | GCGC | 2 cut(s) | 204, 876 |
| Hin1II | CATG | 6 cut(s) | 425, 874, 955, 961, 1293, 1541 |
| Hin6I | GCGC | 2 cut(s) | 202, 874 |
| HinP1I | GCGC | 2 cut(s) | 202, 874 |
| HincII | GTYRAC | 1 cut(s) | 815 |
| HindII | GTYRAC | 1 cut(s) | 815 |
| HinfI | GANTC | 4 cut(s) | 408, 816, 1373, 1454 |
| HpaII | CCGG | 1 cut(s) | 1277 |
| HphI | GGTGA | 1 cut(s) | 1187 |
| Hpy166II | GTNNAC | 2 cut(s) | 284, 815 |
| Hpy188I | TCNGA | 8 cut(s) | 19, 118, 992, 1080, 1346, 1414, 1453, 1521 |
| Hpy188III | TCNNGA | 4 cut(s) | 212, 783, 803, 1458 |
| Hpy8I | GTNNAC | 2 cut(s) | 284, 815 |
| Hpy99I | CGWCG | 1 cut(s) | 1350 |
| HpyAV | CCTTC | 4 cut(s) | 214, 226, 758, 1141 |
| HpyCH4III | ACNGT | 2 cut(s) | 915, 1181 |
| HpyCH4IV | ACGT | 2 cut(s) | 546, 1402 |
| HpySE526I | ACGT | 2 cut(s) | 546, 1402 |
| Hsp92II | CATG | 6 cut(s) | 425, 874, 955, 961, 1293, 1541 |
| HspAI | GCGC | 2 cut(s) | 202, 874 |
| KpnI | GGTACC | 1 cut(s) | 393 |
| Ksp22I | TGATCA | 2 cut(s) | 799, 1387 |
| Kzo9I | GATC | 3 cut(s) | 799, 948, 1387 |
| LguI | GCTCTTC | 1 cut(s) | 1536 |
| LmnI | GCTCC | 2 cut(s) | 901, 1069 |
| LweI | GCATC | 1 cut(s) | 911 |
| MaeI | CTAG | 4 cut(s) | 93, 372, 1053, 1254 |
| MaeII | ACGT | 2 cut(s) | 546, 1402 |
| MaeIII | GTNAC | 3 cut(s) | 1175, 1417, 1438 |
| MalI | GATC | 3 cut(s) | 801, 950, 1389 |
| MboI | GATC | 3 cut(s) | 799, 948, 1387 |
| MboII | GAAGA | 8 cut(s) | 229, 334, 565, 596, 686, 818, 1247, 1553 |
| MhlI | GDGCHC | 4 cut(s) | 185, 286, 1145, 1161 |
| MlsI | TGGCCA | 1 cut(s) | 956 |
| MluCI | AATT | 7 cut(s) | 112, 661, 745, 758, 996, 1162, 1510 |
| MluNI | TGGCCA | 1 cut(s) | 956 |
| MlyI | GAGTC | 2 cut(s) | 810, 1463 |
| MmeI | TCCRAC | 1 cut(s) | 1369 |
| Mox20I | TGGCCA | 1 cut(s) | 956 |
| MroXI | GAANNNNTTC | 1 cut(s) | 252 |
| MscI | TGGCCA | 1 cut(s) | 956 |
| MseI | TTAA | 4 cut(s) | 177, 443, 480, 1169 |
| MslI | CAYNNNNRTG | 1 cut(s) | 956 |
| Msp20I | TGGCCA | 1 cut(s) | 956 |
| MspA1I | CMGCKG | 6 cut(s) | 71, 599, 611, 617, 1201, 1334 |
| MspI | CCGG | 1 cut(s) | 1277 |
| Mva1269I | GAATGC | 2 cut(s) | 490, 1492 |
| NcoI | CCATGG | 1 cut(s) | 957 |
| NdeII | GATC | 3 cut(s) | 799, 948, 1387 |
| NlaIII | CATG | 6 cut(s) | 425, 874, 955, 961, 1293, 1541 |
| NlaIV | GGNNCC | 4 cut(s) | 391, 912, 1050, 1296 |
| NmuCI | GTSAC | 2 cut(s) | 1175, 1417 |
| NspI | RCATGY | 1 cut(s) | 874 |
| PciSI | GCTCTTC | 1 cut(s) | 1536 |
| PctI | GAATGC | 2 cut(s) | 490, 1492 |
| PdmI | GAANNNNTTC | 1 cut(s) | 252 |
| PfeI | GAWTC | 2 cut(s) | 408, 1373 |
| PleI | GAGTC | 2 cut(s) | 810, 1462 |
| PpsI | GAGTC | 2 cut(s) | 810, 1462 |
| Ppu21I | YACGTR | 1 cut(s) | 1403 |
| PshBI | ATTAAT | 1 cut(s) | 443 |
| PspFI | CCCAGC | 1 cut(s) | 1302 |
| PspN4I | GGNNCC | 4 cut(s) | 391, 912, 1050, 1296 |
| PspPI | GGNCC | 2 cut(s) | 133, 777 |
| PstI | CTGCAG | 4 cut(s) | 595, 616, 622, 1495 |
| PstNI | CAGNNNCTG | 2 cut(s) | 461, 899 |
| PvuII | CAGCTG | 4 cut(s) | 71, 611, 617, 1334 |
| RsaI | GTAC | 5 cut(s) | 391, 516, 866, 963, 1405 |
| RsaNI | GTAC | 5 cut(s) | 390, 515, 865, 962, 1404 |
| RseI | CAYNNNNRTG | 1 cut(s) | 956 |
| SalI | GTCGAC | 1 cut(s) | 813 |
| SapI | GCTCTTC | 1 cut(s) | 1536 |
| SaqAI | TTAA | 4 cut(s) | 177, 443, 480, 1169 |
| Sau3AI | GATC | 3 cut(s) | 799, 948, 1387 |
| Sau96I | GGNCC | 2 cut(s) | 133, 777 |
| SchI | GAGTC | 2 cut(s) | 810, 1463 |
| SduI | GDGCHC | 4 cut(s) | 185, 286, 1145, 1161 |
| SfaNI | GCATC | 1 cut(s) | 911 |
| SfcI | CTRYAG | 6 cut(s) | 196, 435, 591, 612, 618, 1491 |
| SinI | GGWCC | 1 cut(s) | 133 |
| SmiI | ATTTAAAT | 1 cut(s) | 1170 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 956 |
| SmlI | CTYRAG | 3 cut(s) | 212, 781, 1093 |
| SmoI | CTYRAG | 3 cut(s) | 212, 781, 1093 |
| Sse9I | AATT | 7 cut(s) | 112, 661, 745, 758, 996, 1162, 1510 |
| SsiI | CCGC | 2 cut(s) | 599, 1201 |
| SspMI | CTAG | 4 cut(s) | 93, 372, 1053, 1254 |
| StyI | CCWWGG | 4 cut(s) | 497, 957, 1064, 1190 |
| SwaI | ATTTAAAT | 1 cut(s) | 1170 |
| TaaI | ACNGT | 2 cut(s) | 915, 1181 |
| TaiI | ACGT | 2 cut(s) | 549, 1405 |
| TaqI | TCGA | 2 cut(s) | 814, 1139 |
| TaqII | GACCGA | 1 cut(s) | 1436 |
| TasI | AATT | 7 cut(s) | 112, 661, 745, 758, 996, 1162, 1510 |
| TauI | GCSGC | 1 cut(s) | 602 |
| TfiI | GAWTC | 2 cut(s) | 408, 1373 |
| Tru1I | TTAA | 4 cut(s) | 177, 443, 480, 1169 |
| Tru9I | TTAA | 4 cut(s) | 177, 443, 480, 1169 |
| TscAI | CASTG | 3 cut(s) | 419, 1191, 1368 |
| TseFI | GTSAC | 2 cut(s) | 1175, 1417 |
| Tsp45I | GTSAC | 2 cut(s) | 1175, 1417 |
| TspDTI | ATGAA | 8 cut(s) | 261, 746, 1248, 1254, 1398, 1490, 1503, 1554 |
| TspGWI | ACGGA | 1 cut(s) | 769 |
| TspRI | CASTG | 3 cut(s) | 419, 1191, 1368 |
| VneI | GTGCAC | 1 cut(s) | 282 |
| VpaK11BI | GGWCC | 1 cut(s) | 133 |
| VspI | ATTAAT | 1 cut(s) | 443 |
| XapI | RAATTY | 3 cut(s) | 112, 661, 1510 |
| XceI | RCATGY | 1 cut(s) | 874 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 757 |
| XmiI | GTMKAC | 1 cut(s) | 814 |
| XmnI | GAANNNNTTC | 1 cut(s) | 252 |
| XspI | CTAG | 4 cut(s) | 93, 372, 1053, 1254 |