Rh7BG137500

Peroxisomal membrane protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
10244289 .. 10248716
4428 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG137500.1

Sequence Viewer

Length: 1440 bp
ATGAGAGAGGACCAAGTGCAAAATGCTATGAAGTTTCTTTCGCACCCAAAAGTTAAGGGCTCTCCTGTCATCTACAGGCGCTCTTTTCTTGAGAAGAAGGGGCTTACGAAGGAGGAGATTGATGAGGCGTTTCGGCGTGTGCCTGACCCACCTCCAAGTGCACAGGCAACTACTGCAAATCAAGCTGATGGACAAGCGAAGACAACAAACATTCAGGCACAAAGTTCAAATCAAACTTTGCAGCCTGCTAGTTCTACCGCCCCGGTGGGTACCTTAGCTCGGTATAGATTCCACTGGTCTCATGCCATTCTTGCTGTAGGATTACTGGCAGCTTCAGGTGCTGGATCTGCTTTACTTATTAAGAATGCTATTATTCCAAGGTTGAGGTCTTGGGTACGAAAGGTTGTATTGGAGGATGACAATGACGTTGAGAAAAAAACTGACACGAAACCCAGTTTAGCAGAAGAAGCTGCAGCAGCGGCTAAATCAGCTGCAGCTGCAGCAGCAGATGTGGCAAAAGCAAGCCAAGAAATGCTGAATTCTAAGACTGAAGAGAGGAAATACTTTGGGGAACTTATGAGTTTGTTAGATGTGCAAGTGCAAGAAATGAAGTCAATGAGTAATTCCATACGGAAATTGGAAGGAGAAACGAGGGCCTCAAGAGCCTCTCTTGGTGATCACGAAGATAGTCAACTCACAGTCACAAAGTCAAAGCAACAATATGTGAATGGCAAGGCAGAGTACGACATGCACTCAGTGCAATCTTTCTCAGCTCCTGCATCTGTGGAACCATCTGCTGCACCTCACTCAAAGTCTTATATGGAGATCATGGCCATGGTACAAAGAGGGGAGAAACCTCCTAATGTCAGAGAAATTGATGATTTACCGCCCAATCCTAATCAGCAGCCATCAAATCCTCGCTTGGTTCCTAGAGCCAAGCCTTGGGAGCTTGGTCAGACCCAAAACAACTCAAGCCAAGTATATCAGTCCCATACAAGTAGCGAAGCCTTCAGTTCGAGCACGCAGGAGAATGGGCTCAATTATTTAAATGGTGACAGTTCAGTGCCTTGGTGGCAGCGGAAAACTCCCAGTATCACAGAGATAGAAAATGAAGATGAAGTCAAGGCAGCTAGTTCGCAAGTAGTTAAGCAGCCGGTTCAGCGTGCATGGGTTCCTCCCCAGCCACCCCCAGTTGCAATGCCAGAAGCAGCTGAAGCCATCCGACGGCCAAAACCATCAGTGCAGAGGGAATCTCTGGGTAATGATCAGGCCGTAGCACGTTCTTCATCAGATGTGACTGATGAGTTGCAGAGGGTAACAAAAATATCCGAGTCTGGAGGTGCATTGGAGATGAACAATGGGAATGCTGCAGAAATCAGTAATGGGAATTCATATCTGAACTCTACCGAGATACATGAAGAGCAAGAAAACTATGAGTAA

Protein Analysis

479

Amino Acids

52.46

Weight (kDa)

5.79

Isoelectric Point (pI)

52.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pex14_N PF04695 2 - 46 4.1e-13 Pex14 N-terminal domain
PEX14-like_2nd PF23020 96 - 214 3e-57 Peroxisomal membrane protein PEX14-like, central
KPWE_dom PF17733 268 - 316 7.4e-16 PEX14-like KPWE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 269
AccB1I GGYRCC 1 cut(s) 269
AccB7I CCANNNNNTGG 1 cut(s) 942
AciI CCGC 4 cut(s) 258, 479, 887, 1078
AclWI GGATC 1 cut(s) 352
AcoI YGGCCR 2 cut(s) 831, 1226
AcsI RAATTY 2 cut(s) 538, 1387
AcuI CTGAAG 4 cut(s) 318, 570, 994, 1233
AdeI CACNNNGTG 1 cut(s) 757
AfaI GTAC 4 cut(s) 271, 396, 743, 840
AfiI CCNNNNNNNGG 3 cut(s) 279, 942, 1224
AgsI TTSAA 1 cut(s) 228
Alw21I GWGCWC 2 cut(s) 163, 1022
Alw26I GTCTC 1 cut(s) 303
Alw44I GTGCAC 1 cut(s) 159
AlwI GGATC 1 cut(s) 352
AlwNI CAGNNNCTG 2 cut(s) 341, 776
AoxI GGCC 4 cut(s) 654, 831, 1226, 1269
ApaLI GTGCAC 1 cut(s) 159
ApoI RAATTY 2 cut(s) 538, 1387
Asp718I GGTACC 1 cut(s) 269
AspLEI GCGC 1 cut(s) 81
AspS9I GGNCC 2 cut(s) 10, 654
AsuC2I CCSGG 1 cut(s) 263
AsuHPI GGTGA 2 cut(s) 686, 1064
AvaII GGWCC 1 cut(s) 10
BaeGI GKGCMC 1 cut(s) 163
BalI TGGCCA 1 cut(s) 833
BanI GGYRCC 1 cut(s) 269
BanII GRGCYC 2 cut(s) 62, 1038
BbsI GAAGAC 1 cut(s) 206
Bbv12I GWGCWC 2 cut(s) 163, 1022
BccI CCATC 5 cut(s) 182, 799, 916, 1226, 1243
BceAI ACGGC 2 cut(s) 1241, 1256
BcgI CGANNNNNNTGC 2 cut(s) 1116, 1150
BclI TGATCA 2 cut(s) 676, 1264
BcnI CCSGG 1 cut(s) 263
BcoDI GTCTC 1 cut(s) 303
BfaI CTAG 3 cut(s) 249, 930, 1131
BfmI CTRYAG 6 cut(s) 73, 315, 471, 492, 498, 1368
BfoI RGCGCY 1 cut(s) 82
BglI GCCNNNNNGGC 1 cut(s) 1072
Bme1390I CCNGG 1 cut(s) 263
Bme18I GGWCC 1 cut(s) 10
BmgT120I GGNCC 2 cut(s) 10, 654
BmiI GGNNCC 4 cut(s) 271, 789, 927, 1173
BmrFI CCNGG 1 cut(s) 263
BmrI ACTGGG 3 cut(s) 447, 1083, 1184
BmsI GCATC 1 cut(s) 788
BmuI ACTGGG 3 cut(s) 447, 1083, 1184
BpiI GAAGAC 1 cut(s) 206
BplI GAGNNNNNCTC 2 cut(s) 1237, 1269
BpmI CTGGAG 1 cut(s) 1356
Bpu10I CCTNAGC 1 cut(s) 274
BpuEI CTTGAG 3 cut(s) 110, 643, 955
BpuMI CCSGG 1 cut(s) 263
BsaI GGTCTC 1 cut(s) 303
BsaJI CCNNGG 5 cut(s) 261, 377, 834, 941, 1067
Bsc4I CCNNNNNNNGG 3 cut(s) 279, 942, 1224
Bse118I RCCGGY 1 cut(s) 1153
Bse1I ACTGG 5 cut(s) 299, 330, 453, 1089, 1190
Bse3DI GCAATG 1 cut(s) 1203
BseDI CCNNGG 5 cut(s) 261, 377, 834, 941, 1067
BseGI GGATG 2 cut(s) 421, 1218
BseLI CCNNNNNNNGG 3 cut(s) 279, 942, 1224
BseMI GCAATG 1 cut(s) 1203
BseMII CTCAG 2 cut(s) 768, 783
BseNI ACTGG 5 cut(s) 299, 330, 453, 1089, 1190
BseRI GAGGAG 1 cut(s) 128
BseSI GKGCMC 1 cut(s) 163
BseYI CCCAGC 1 cut(s) 1179
BsgI GTGCAG 2 cut(s) 783, 1262
BshFI GGCC 4 cut(s) 656, 833, 1228, 1271
BshNI GGYRCC 1 cut(s) 269
BsiHKAI GWGCWC 2 cut(s) 163, 1022
BsiSI CCGG 2 cut(s) 263, 1154
BslFI GGGAC 1 cut(s) 973
BslI CCNNNNNNNGG 3 cut(s) 279, 942, 1224
BsmAI GTCTC 1 cut(s) 303
BsmFI GGGAC 1 cut(s) 973
BsmI GAATGC 2 cut(s) 370, 1369
BsnI GGCC 4 cut(s) 656, 833, 1228, 1271
Bso31I GGTCTC 1 cut(s) 303
Bsp1286I GDGCHC 4 cut(s) 62, 163, 1022, 1038
Bsp143I GATC 4 cut(s) 344, 676, 825, 1264
Bsp19I CCATGG 1 cut(s) 834
BspACI CCGC 4 cut(s) 258, 479, 887, 1078
BspANI GGCC 4 cut(s) 656, 833, 1228, 1271
BspCNI CTCAG 2 cut(s) 767, 782
BspLI GGNNCC 4 cut(s) 271, 789, 927, 1173
BspMAI CTGCAG 4 cut(s) 475, 496, 502, 1372
BspPI GGATC 1 cut(s) 352
BspQI GCTCTTC 1 cut(s) 1413
BspT107I GGYRCC 1 cut(s) 269
BspTNI GGTCTC 1 cut(s) 303
BsrDI GCAATG 1 cut(s) 1203
BsrFI RCCGGY 1 cut(s) 1153
BsrI ACTGG 5 cut(s) 299, 330, 453, 1089, 1190
BssAI RCCGGY 1 cut(s) 1153
BssECI CCNNGG 5 cut(s) 261, 377, 834, 941, 1067
BssMI GATC 4 cut(s) 344, 676, 825, 1264
BssT1I CCWWGG 4 cut(s) 377, 834, 941, 1067
Bst4CI ACNGT 2 cut(s) 700, 1058
Bst6I CTCTTC 2 cut(s) 546, 1413
BstAPI GCANNNNNTGC 2 cut(s) 173, 757
BstC8I GCNNGC 4 cut(s) 246, 523, 1022, 1164
BstDEI CTNAG 4 cut(s) 274, 543, 754, 769
BstDSI CCRYGG 1 cut(s) 834
BstF5I GGATG 2 cut(s) 421, 1218
BstH2I RGCGCY 1 cut(s) 82
BstHHI GCGC 1 cut(s) 81
BstKTI GATC 4 cut(s) 347, 679, 828, 1267
BstMAI GTCTC 1 cut(s) 303
BstMBI GATC 4 cut(s) 344, 676, 825, 1264
BstNSI RCATGY 1 cut(s) 751
BstSCI CCNGG 1 cut(s) 261
BstSFI CTRYAG 6 cut(s) 73, 315, 471, 492, 498, 1368
BstSLI GKGCMC 1 cut(s) 163
BstV2I GAAGAC 1 cut(s) 206
BstX2I RGATCY 1 cut(s) 344
BstYI RGATCY 1 cut(s) 344
BsuRI GGCC 4 cut(s) 656, 833, 1228, 1271
BtgI CCRYGG 1 cut(s) 834
BtsCI GGATG 2 cut(s) 421, 1218
BtsIMutI CAGTG 4 cut(s) 292, 762, 1068, 1245
Cac8I GCNNGC 4 cut(s) 246, 523, 1022, 1164
CaiI CAGNNNCTG 2 cut(s) 341, 776
CfoI GCGC 1 cut(s) 81
Cfr10I RCCGGY 1 cut(s) 1153
Cfr13I GGNCC 2 cut(s) 10, 654
Csp6I GTAC 4 cut(s) 270, 395, 742, 839
CviAII CATG 6 cut(s) 302, 748, 829, 835, 1167, 1415
CviQI GTAC 4 cut(s) 270, 395, 742, 839
DdeI CTNAG 4 cut(s) 274, 543, 754, 769
DpnI GATC 4 cut(s) 346, 678, 827, 1266
DpnII GATC 4 cut(s) 344, 676, 825, 1264
DraI TTTAAA 1 cut(s) 1047
DraIII CACNNNGTG 1 cut(s) 757
EaeI YGGCCR 2 cut(s) 831, 1226
Eam1104I CTCTTC 2 cut(s) 546, 1413
EarI CTCTTC 2 cut(s) 546, 1413
Eco130I CCWWGG 4 cut(s) 377, 834, 941, 1067
Eco24I GRGCYC 2 cut(s) 62, 1038
Eco31I GGTCTC 1 cut(s) 303
Eco47I GGWCC 1 cut(s) 10
Eco57I CTGAAG 4 cut(s) 318, 570, 994, 1233
EcoO109I RGGNCCY 1 cut(s) 654
EcoRI GAATTC 2 cut(s) 538, 1387
EcoT14I CCWWGG 4 cut(s) 377, 834, 941, 1067
EcoT38I GRGCYC 2 cut(s) 62, 1038
ErhI CCWWGG 4 cut(s) 377, 834, 941, 1067
FaeI CATG 6 cut(s) 305, 751, 832, 838, 1170, 1418
FaqI GGGAC 1 cut(s) 973
FatI CATG 6 cut(s) 301, 747, 828, 834, 1166, 1414
FbaI TGATCA 2 cut(s) 676, 1264
FokI GGATG 2 cut(s) 428, 1205
FriOI GRGCYC 2 cut(s) 62, 1038
FspBI CTAG 3 cut(s) 249, 930, 1131
GlaI GCGC 1 cut(s) 80
GsaI CCCAGC 1 cut(s) 1183
GsuI CTGGAG 1 cut(s) 1356
HaeII RGCGCY 1 cut(s) 82
HaeIII GGCC 4 cut(s) 656, 833, 1228, 1271
HapII CCGG 2 cut(s) 263, 1154
HhaI GCGC 1 cut(s) 81
Hin1II CATG 6 cut(s) 305, 751, 832, 838, 1170, 1418
Hin6I GCGC 1 cut(s) 79
HinP1I GCGC 1 cut(s) 79
HincII GTYRAC 1 cut(s) 692
HindII GTYRAC 1 cut(s) 692
HinfI GANTC 3 cut(s) 288, 1250, 1331
HpaII CCGG 2 cut(s) 263, 1154
HphI GGTGA 2 cut(s) 686, 1064
Hpy166II GTNNAC 2 cut(s) 161, 692
Hpy188I TCNGA 6 cut(s) 869, 957, 1223, 1291, 1330, 1398
Hpy188III TCNNGA 4 cut(s) 89, 660, 680, 1335
Hpy8I GTNNAC 2 cut(s) 161, 692
Hpy99I CGWCG 1 cut(s) 1227
HpyAV CCTTC 4 cut(s) 91, 103, 635, 1018
HpyCH4III ACNGT 2 cut(s) 700, 1058
HpyCH4IV ACGT 2 cut(s) 426, 1279
HpyF3I CTNAG 4 cut(s) 274, 543, 754, 769
HpySE526I ACGT 2 cut(s) 426, 1279
Hsp92II CATG 6 cut(s) 305, 751, 832, 838, 1170, 1418
HspAI GCGC 1 cut(s) 79
KpnI GGTACC 1 cut(s) 273
Ksp22I TGATCA 2 cut(s) 676, 1264
Kzo9I GATC 4 cut(s) 344, 676, 825, 1264
LguI GCTCTTC 1 cut(s) 1413
LmnI GCTCC 2 cut(s) 778, 946
LweI GCATC 1 cut(s) 788
MaeI CTAG 3 cut(s) 249, 930, 1131
MaeII ACGT 2 cut(s) 426, 1279
MaeIII GTNAC 4 cut(s) 700, 1052, 1294, 1315
MalI GATC 4 cut(s) 346, 678, 827, 1266
MboI GATC 4 cut(s) 344, 676, 825, 1264
MboII GAAGA 8 cut(s) 106, 211, 476, 563, 695, 1124, 1275, 1430
MflI RGATCY 1 cut(s) 344
MhlI GDGCHC 4 cut(s) 62, 163, 1022, 1038
MlsI TGGCCA 1 cut(s) 833
MluCI AATT 6 cut(s) 538, 622, 635, 873, 1039, 1387
MluNI TGGCCA 1 cut(s) 833
MlyI GAGTC 1 cut(s) 1340
MmeI TCCRAC 1 cut(s) 1246
Mox20I TGGCCA 1 cut(s) 833
MscI TGGCCA 1 cut(s) 833
MseI TTAA 4 cut(s) 54, 360, 1046, 1146
MslI CAYNNNNRTG 1 cut(s) 833
Msp20I TGGCCA 1 cut(s) 833
MspA1I CMGCKG 5 cut(s) 479, 491, 497, 1078, 1211
MspI CCGG 2 cut(s) 263, 1154
MspR9I CCNGG 1 cut(s) 263
Mva1269I GAATGC 2 cut(s) 370, 1369
NciI CCSGG 1 cut(s) 263
NcoI CCATGG 1 cut(s) 834
NdeII GATC 4 cut(s) 344, 676, 825, 1264
NlaIII CATG 6 cut(s) 305, 751, 832, 838, 1170, 1418
NlaIV GGNNCC 4 cut(s) 271, 789, 927, 1173
NmuCI GTSAC 3 cut(s) 700, 1052, 1294
NspI RCATGY 1 cut(s) 751
PciSI GCTCTTC 1 cut(s) 1413
PctI GAATGC 2 cut(s) 370, 1369
PfeI GAWTC 2 cut(s) 288, 1250
PflMI CCANNNNNTGG 1 cut(s) 942
PleI GAGTC 1 cut(s) 1339
PpsI GAGTC 1 cut(s) 1339
PspFI CCCAGC 1 cut(s) 1179
PspN4I GGNNCC 4 cut(s) 271, 789, 927, 1173
PspPI GGNCC 2 cut(s) 10, 654
PstI CTGCAG 4 cut(s) 475, 496, 502, 1372
PstNI CAGNNNCTG 2 cut(s) 341, 776
PsuI RGATCY 1 cut(s) 344
PvuII CAGCTG 3 cut(s) 491, 497, 1211
RsaI GTAC 4 cut(s) 271, 396, 743, 840
RsaNI GTAC 4 cut(s) 270, 395, 742, 839
RseI CAYNNNNRTG 1 cut(s) 833
SapI GCTCTTC 1 cut(s) 1413
SaqAI TTAA 4 cut(s) 54, 360, 1046, 1146
Sau3AI GATC 4 cut(s) 344, 676, 825, 1264
Sau96I GGNCC 2 cut(s) 10, 654
SchI GAGTC 1 cut(s) 1340
ScrFI CCNGG 1 cut(s) 263
SduI GDGCHC 4 cut(s) 62, 163, 1022, 1038
SfaNI GCATC 1 cut(s) 788
SfcI CTRYAG 6 cut(s) 73, 315, 471, 492, 498, 1368
SinI GGWCC 1 cut(s) 10
SmiI ATTTAAAT 1 cut(s) 1047
SmiMI CAYNNNNRTG 1 cut(s) 833
SmlI CTYRAG 3 cut(s) 89, 658, 970
SmoI CTYRAG 3 cut(s) 89, 658, 970
Sse9I AATT 6 cut(s) 538, 622, 635, 873, 1039, 1387
SsiI CCGC 4 cut(s) 258, 479, 887, 1078
SspMI CTAG 3 cut(s) 249, 930, 1131
StyD4I CCNGG 1 cut(s) 261
StyI CCWWGG 4 cut(s) 377, 834, 941, 1067
SwaI ATTTAAAT 1 cut(s) 1047
TaaI ACNGT 2 cut(s) 700, 1058
TaiI ACGT 2 cut(s) 429, 1282
TaqI TCGA 1 cut(s) 1016
TasI AATT 6 cut(s) 538, 622, 635, 873, 1039, 1387
TauI GCSGC 1 cut(s) 482
TfiI GAWTC 2 cut(s) 288, 1250
Tru1I TTAA 4 cut(s) 54, 360, 1046, 1146
Tru9I TTAA 4 cut(s) 54, 360, 1046, 1146
TscAI CASTG 4 cut(s) 299, 762, 1068, 1245
TseFI GTSAC 3 cut(s) 700, 1052, 1294
Tsp45I GTSAC 3 cut(s) 700, 1052, 1294
TspDTI ATGAA 8 cut(s) 44, 623, 1125, 1131, 1275, 1367, 1380, 1431
TspGWI ACGGA 1 cut(s) 646
TspRI CASTG 4 cut(s) 299, 762, 1068, 1245
Van91I CCANNNNNTGG 1 cut(s) 942
VneI GTGCAC 1 cut(s) 159
VpaK11BI GGWCC 1 cut(s) 10
XapI RAATTY 2 cut(s) 538, 1387
XceI RCATGY 1 cut(s) 751
XcmI CCANNNNNNNNNTGG 1 cut(s) 634
XspI CTAG 3 cut(s) 249, 930, 1131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.