Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0008675

Physical Location & Seq

Genomic Coordinates Forward (+)

2607584 .. 2609724

Gene Structure 2141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1032100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGCTGCTTTGTTACAATGGAATGGGAACTAGACATGGATTGTTCAAACAATTTGTGGGTGACCTCTCTTTCCTCGACTCCACACCCTTTGGGAAGCTATTGGACTCATGCATCCGAACCAAATTGGCACGTGATGCACGTCGCATCCATGCCCGTATCATCAAGACCCAAATTTCCTCGGAGATTTTTATCCAGAATAGGCTCATTGATGCTTATGGAAAATGTGGTTGCTTGGATGATGCATGCAAACTGTTTGATAAAATGCCTGAAAGGAACACTTTCACTTGGAACTCCATTTTAAGCACATTAACAAAGTTGGGTTTAATTGATGAGGCTGTGAAGATTTTTAGGTTAATGCCCGAGCCTGACCAGTGCTCATGGAATTCGATGGTATCAGGGTTTGCCCAGCATGACCGCTTTGAAGAATCTTTGGAATATTTTGTTAGATTGCATGGGGAGAATTTTGTGCCAAATGAATACTCATTTGGTAGTGCTCTTAGTGCTTGTGCAGGTTTAAGAGAGTTGAAAATGGGTGTTCAAATTCATGCTGTAATTGCAAAATCCTCGTACTCATCAGATGTTTATATGGGGTCTGCACTTATTGATATGTACTCTAAATGTGGGAGCGTTTCTTGTGCACAAAGAGTTTTTGATGGGATGAATGACCGGAATACTGTTTCTTGGAACAGTTTGATTACTTGTTATGAGCAGAATGGCCCAGCAAGCGAAGCCTTGGAAGTTTTTGTGAAGATGATGGAGTGTGGGTTCAAACCGGATGAACTAACTTTAGCCAGTGTGGTAAGTGCATGCGCAAGCTTGTCCGCAATAAAGGAAGGTCAGCAAATACACGCTTGTGTTGTTAAATTTGATATGTATGCAAAATGCAAAAGAGTAAAAGAAGCCAGATGGATTTTTGATGGGATGCCTGTTAGAAATGTTGTTTCAGAAACTTCCATGGTAAGTGGATATGCAAAATCGGCAAGCGTAAAAGCAGCAAGATTGATGTTTACAAGGATGATGGAAAGAAATATAGTCTCTTGGAACGCACTTATTGCAGGGTACACACAGAATGGGGAAAATGAAGAGGCCCTTGGACTCTTTCTCCTCCTGAAGAGGGAGTCTGTTCTGCCAACCCACTATACATTTGGGAATCTACTCAATGCTTGTGCAAGTCTTGTTGATCTGCAGCTTGGCAGGCAGGCTCATGTACATGTATTGAAGCACGGATTTCAATTCCAGGTCGGGGAAGAGCCTGATATTTTTGTCGGGAATTCTCTAATAGATATGTATATGAAATGTGGATCTATTGAAGATGGCTGTCGTGTTTTTAAAAATATGTTGCAAAGGGATTATGTCTCCTGGAATGCCATGATTGTGGGGTATGCACAAAATGGTTACGGGATTGAAGCTCTTGAAGTATTTAGAAAAATGTTGGCATCAGGGGAGCAACCAGACCATGTCACTATGATTGGTGTGCTATGCGCTTGTAGCCACGCAAGATTGGTTGATGAAGGAAAAAAGTACTTTTACTCAATGAGTGAGGAACATGGTTTGGTACCATTGAAGGACCATTATACATGTATGGTTGATCTGCTTGGTCGAGCTGGCTGCCTTATTGATGCCAAAAATTTGATCGAGGTCATGCCAATGCAACCTGATGCTGTTATATGGGGGTCTTTGCTTGCTGCTTGTAAAGTTCATCGTAACATTACCTTAGGGGAGTATGTGGCCGAGAAGCTCTTAGATATTGAACCTAGGAACTCTGGACCATATGTTCTTCTCTCAAACATGTATGCCGAGCTCGGGAGATGGGCTGATGTTATACGAGTAAGGAAGCTGATGAGGCAACGGGGAGTTGTCAAGCAGCCAGGTTGCAGTTGGATTGAAATACAGGGTCATGTGCATGTTTTCCTGGTGAAAGATAAAAGGCATCCTCAAAGGAAAGAAATACATTATGTTTTGAAGTTGCTTCTTGAACAGATGAGGCGATCTGGATATGTCGAAGATGCTTGTGATCTCGAGTCCGATGAAGAACATGGTGAATCCCAACTAACCTCATTGTACCACATCGATATGTTGGAAGATGCAGCAGTCGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009451 GO:0009743 GO:0009756 GO:0009987 GO:0010033 GO:0010182 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0023052 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

700

Amino Acids

78.66

Weight (kDa)

6.33

Isoelectric Point (pI)

46.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	66 - 92	9.8e-06	PPR repeat
PPR_2	PF13041	223 - 271	3.7e-09	PPR repeat family
PPR	PF01535	226 - 256	2.4e-07	PPR repeat
PPR_2	PF13041	342 - 390	5.5e-11	PPR repeat family
PPR	PF01535	345 - 374	6.9e-06	PPR repeat
PPR_2	PF13041	450 - 497	5.9e-08	PPR repeat family
PPR	PF01535	452 - 481	4.2e-08	PPR repeat
E_motif	PF20431	567 - 629	6.5e-23	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008675)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13600
fragaria_vesca	FvH4_7g02360 FvH4_7g02360
malus_domestica	MD02G1294800.v1.1 MD07G1031100.v1.1 MD07G1032100.v1.1
prunus_persica	Prupe.7G009700_v2.0.a1
pyrus_communis	pycom07g02270
rosa_chinensis	RchiOBHm_Chr1g0319691 RchiOBHm_Chr7g0218591
rosa_laevigata	RLG00000002327 RLG00000030463
rosa_multiflora	Rmu_sc0001301.1_g000024
rosa_roxburghii	Rroxscaffold_3G00240770
rosa_rugosa	Rorug01G0029400 Rorug07G0178600
rosa_samantha	Rh1BG038400 Rh7AG319700 Rh7BG311700 Rh7CG336600 Rh7DG318700
rosa_wichuraiana	Rw0G015750 Rw7G027230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	811
Acc36I	ACCTGC	1 cut(s)	500
Acc65I	GGTACC	1 cut(s)	1555
AccB1I	GGYRCC	1 cut(s)	1555
AciI	CCGC	2 cut(s)	415, 822
AclWI	GGATC	1 cut(s)	1309
AcoI	YGGCCR	1 cut(s)	1728
AcsI	RAATTY	7 cut(s)	171, 382, 460, 540, 863, 1270, 1627
AcuI	CTGAAG	1 cut(s)	1130
AcvI	CACGTG	1 cut(s)	131
AfaI	GTAC	7 cut(s)	569, 611, 1061, 1209, 1523, 1557, 2063
AfiI	CCNNNNNNNGG	3 cut(s)	1114, 1243, 1803
AflIII	ACRYGT	3 cut(s)	1210, 1577, 1788
AjiI	CACGTC	1 cut(s)	140
AjnI	CCWGG	4 cut(s)	1236, 1358, 1867, 1911
AjuI	GAANNNNNNNTTGG	4 cut(s)	468, 500, 1074, 1106
AleI	CACNNNNGTG	1 cut(s)	852
AloI	GAACNNNNNNTCC	4 cut(s)	749, 781, 1758, 1790
AluBI	AGCT	8 cut(s)	97, 816, 1189, 1409, 1604, 1738, 1801, 1837
AluI	AGCT	8 cut(s)	97, 816, 1189, 1409, 1604, 1738, 1801, 1837
Alw21I	GWGCWC	4 cut(s)	377, 496, 640, 1803
Alw26I	GTCTC	2 cut(s)	1039, 1360
Alw44I	GTGCAC	1 cut(s)	636
AlwI	GGATC	1 cut(s)	1309
Ama87I	CYCGRG	3 cut(s)	359, 1802, 2018
AoxI	GGCC	3 cut(s)	715, 1086, 1728
ApaLI	GTGCAC	1 cut(s)	636
ApeKI	GCWGC	7 cut(s)	4, 992, 1186, 1608, 1685, 1864, 2087
ApoI	RAATTY	7 cut(s)	171, 382, 460, 540, 863, 1270, 1627
Asp700I	GAANNNNTTC	1 cut(s)	278
Asp718I	GGTACC	1 cut(s)	1555
AspA2I	CCTAGG	1 cut(s)	1754
AspLEI	GCGC	2 cut(s)	812, 1484
AspS9I	GGNCC	4 cut(s)	716, 1087, 1567, 1766
AsuHPI	GGTGA	3 cut(s)	71, 1927, 2051
AvaI	CYCGRG	3 cut(s)	359, 1802, 2018
AvaII	GGWCC	2 cut(s)	1567, 1766
AvrII	CCTAGG	1 cut(s)	1754
AxyI	CCTNAGG	1 cut(s)	1714
BaeGI	GKGCMC	1 cut(s)	640
BanI	GGYRCC	1 cut(s)	1555
BanII	GRGCYC	1 cut(s)	1803
BbrPI	CACGTG	1 cut(s)	131
Bbv12I	GWGCWC	4 cut(s)	377, 496, 640, 1803
BbvI	GCAGC	5 cut(s)	1004, 1198, 1595, 1672, 1876
BccI	CCATC	8 cut(s)	382, 647, 748, 900, 911, 1012, 1307, 1803
BcgI	CGANNNNNNTGC	4 cut(s)	546, 580, 1590, 1624
BciT130I	CCWGG	4 cut(s)	1238, 1360, 1869, 1913
BcoDI	GTCTC	2 cut(s)	1039, 1360
BfaI	CTAG	2 cut(s)	30, 1755
BfmI	CTRYAG	1 cut(s)	1184
BfuAI	ACCTGC	1 cut(s)	500
BisI	GCNGC	7 cut(s)	5, 993, 1187, 1609, 1686, 1865, 2088
BlnI	CCTAGG	1 cut(s)	1754
BlsI	GCNGC	7 cut(s)	6, 994, 1188, 1610, 1687, 1866, 2089
BmcAI	AGTACT	1 cut(s)	1523
Bme1390I	CCNGG	4 cut(s)	1238, 1360, 1869, 1913
Bme18I	GGWCC	2 cut(s)	1567, 1766
BmeT110I	CYCGRG	3 cut(s)	359, 1802, 2018
BmgBI	CACGTC	1 cut(s)	140
BmgT120I	GGNCC	4 cut(s)	716, 1087, 1567, 1766
BmiI	GGNNCC	1 cut(s)	1557
BmrFI	CCNGG	4 cut(s)	1238, 1360, 1869, 1913
Bsa29I	ATCGAT	1 cut(s)	2070
BsaAI	YACGTR	1 cut(s)	131
BsaBI	GATNNNNATC	1 cut(s)	188
BsaJI	CCNNGG	5 cut(s)	177, 732, 954, 1090, 1754
BsaWI	WCCGGW	2 cut(s)	666, 772
BsaXI	ACNNNNNCTCC	4 cut(s)	749, 779, 1086, 1116
Bsc4I	CCNNNNNNNGG	3 cut(s)	1114, 1243, 1803
Bse1I	ACTGG	2 cut(s)	370, 792
Bse21I	CCTNAGG	1 cut(s)	1714
Bse8I	GATNNNNATC	1 cut(s)	188
BseBI	CCWGG	4 cut(s)	1238, 1360, 1869, 1913
BseCI	ATCGAT	1 cut(s)	2070
BseDI	CCNNGG	5 cut(s)	177, 732, 954, 1090, 1754
BseGI	GGATG	8 cut(s)	111, 144, 241, 663, 781, 927, 1020, 1930
BseJI	GATNNNNATC	1 cut(s)	188
BseLI	CCNNNNNNNGG	3 cut(s)	1114, 1243, 1803
BseNI	ACTGG	2 cut(s)	370, 792
BseRI	GAGGAG	1 cut(s)	1094
BseSI	GKGCMC	1 cut(s)	640
BseXI	GCAGC	5 cut(s)	1004, 1198, 1595, 1672, 1876
BseYI	CCCAGC	2 cut(s)	405, 718
BsgI	GTGCAG	2 cut(s)	528, 579
BshFI	GGCC	3 cut(s)	717, 1088, 1730
BshNI	GGYRCC	1 cut(s)	1555
BshVI	ATCGAT	1 cut(s)	2070
BsiHKAI	GWGCWC	4 cut(s)	377, 496, 640, 1803
BsiHKCI	CYCGRG	3 cut(s)	359, 1802, 2018
BsiSI	CCGG	2 cut(s)	667, 773
BslI	CCNNNNNNNGG	3 cut(s)	1114, 1243, 1803
BsmAI	GTCTC	2 cut(s)	1039, 1360
BsmI	GAATGC	1 cut(s)	1369
BsnI	GGCC	3 cut(s)	717, 1088, 1730
BsoBI	CYCGRG	3 cut(s)	359, 1802, 2018
Bsp1286I	GDGCHC	4 cut(s)	377, 496, 640, 1803
Bsp1407I	TGTACA	1 cut(s)	1207
Bsp143I	GATC	6 cut(s)	1180, 1301, 1588, 1632, 1988, 2014
Bsp19I	CCATGG	1 cut(s)	954
BspACI	CCGC	2 cut(s)	415, 822
BspANI	GGCC	3 cut(s)	717, 1088, 1730
BspDI	ATCGAT	1 cut(s)	2070
BspLI	GGNNCC	1 cut(s)	1557
BspMAI	CTGCAG	1 cut(s)	1188
BspMI	ACCTGC	1 cut(s)	500
BspPI	GGATC	1 cut(s)	1309
BspQI	GCTCTTC	1 cut(s)	1242
BspT107I	GGYRCC	1 cut(s)	1555
BsrGI	TGTACA	1 cut(s)	1207
BsrI	ACTGG	2 cut(s)	370, 792
BssECI	CCNNGG	5 cut(s)	177, 732, 954, 1090, 1754
BssMI	GATC	6 cut(s)	1180, 1301, 1588, 1632, 1988, 2014
BssT1I	CCWWGG	4 cut(s)	732, 954, 1090, 1754
Bst2UI	CCWGG	4 cut(s)	1238, 1360, 1869, 1913
Bst4CI	ACNGT	3 cut(s)	252, 676, 689
Bst6I	CTCTTC	3 cut(s)	1077, 1106, 1242
BstAPI	GCANNNNNTGC	2 cut(s)	134, 1052
BstAUI	TGTACA	1 cut(s)	1207
BstBAI	YACGTR	1 cut(s)	131
BstC8I	GCNNGC	9 cut(s)	244, 724, 808, 814, 982, 1196, 1200, 1606, 1683
BstDEI	CTNAG	3 cut(s)	497, 1714, 1741
BstDSI	CCRYGG	1 cut(s)	954
BstEII	GGTNACC	1 cut(s)	59
BstF5I	GGATG	8 cut(s)	111, 144, 241, 663, 781, 927, 1020, 1930
BstHHI	GCGC	2 cut(s)	812, 1484
BstKTI	GATC	6 cut(s)	1183, 1304, 1591, 1635, 1991, 2017
BstMAI	GTCTC	2 cut(s)	1039, 1360
BstMBI	GATC	6 cut(s)	1180, 1301, 1588, 1632, 1988, 2014
BstNI	CCWGG	4 cut(s)	1238, 1360, 1869, 1913
BstNSI	RCATGY	6 cut(s)	246, 810, 1214, 1581, 1792, 1907
BstPI	GGTNACC	1 cut(s)	59
BstSCI	CCNGG	4 cut(s)	1236, 1358, 1867, 1911
BstSFI	CTRYAG	1 cut(s)	1184
BstSLI	GKGCMC	1 cut(s)	640
BstV1I	GCAGC	5 cut(s)	1004, 1198, 1595, 1672, 1876
BstX2I	RGATCY	1 cut(s)	1301
BstXI	CCANNNNNNTGG	1 cut(s)	1375
BstYI	RGATCY	1 cut(s)	1301
Bsu15I	ATCGAT	1 cut(s)	2070
Bsu36I	CCTNAGG	1 cut(s)	1714
BsuRI	GGCC	3 cut(s)	717, 1088, 1730
BsuTUI	ATCGAT	1 cut(s)	2070
BtgI	CCRYGG	1 cut(s)	954
BtrI	CACGTC	1 cut(s)	140
BtsCI	GGATG	8 cut(s)	111, 144, 241, 663, 781, 927, 1020, 1930
BtsIMutI	CAGTG	2 cut(s)	377, 799
BveI	ACCTGC	1 cut(s)	500
Cac8I	GCNNGC	9 cut(s)	244, 724, 808, 814, 982, 1196, 1200, 1606, 1683
CfoI	GCGC	2 cut(s)	812, 1484
Cfr13I	GGNCC	4 cut(s)	716, 1087, 1567, 1766
ClaI	ATCGAT	1 cut(s)	2070
Csp6I	GTAC	7 cut(s)	568, 610, 1060, 1208, 1522, 1556, 2062
CspCI	CAANNNNNGTGG	2 cut(s)	70, 105
CviQI	GTAC	7 cut(s)	568, 610, 1060, 1208, 1522, 1556, 2062
DdeI	CTNAG	3 cut(s)	497, 1714, 1741
DpnI	GATC	6 cut(s)	1182, 1303, 1590, 1634, 1990, 2016
DpnII	GATC	6 cut(s)	1180, 1301, 1588, 1632, 1988, 2014
DraI	TTTAAA	1 cut(s)	1330
EaeI	YGGCCR	1 cut(s)	1728
Eam1104I	CTCTTC	3 cut(s)	1077, 1106, 1242
EarI	CTCTTC	3 cut(s)	1077, 1106, 1242
Ecl136II	GAGCTC	1 cut(s)	1801
Eco130I	CCWWGG	4 cut(s)	732, 954, 1090, 1754
Eco24I	GRGCYC	1 cut(s)	1803
Eco47I	GGWCC	2 cut(s)	1567, 1766
Eco53kI	GAGCTC	1 cut(s)	1801
Eco57I	CTGAAG	1 cut(s)	1130
Eco72I	CACGTG	1 cut(s)	131
Eco81I	CCTNAGG	1 cut(s)	1714
Eco88I	CYCGRG	3 cut(s)	359, 1802, 2018
Eco91I	GGTNACC	1 cut(s)	59
EcoICRI	GAGCTC	1 cut(s)	1801
EcoO109I	RGGNCCY	1 cut(s)	1087
EcoO65I	GGTNACC	1 cut(s)	59
EcoRI	GAATTC	2 cut(s)	382, 1270
EcoRII	CCWGG	4 cut(s)	1236, 1358, 1867, 1911
EcoT14I	CCWWGG	4 cut(s)	732, 954, 1090, 1754
EcoT22I	ATGCAT	2 cut(s)	113, 244
EcoT38I	GRGCYC	1 cut(s)	1803
ErhI	CCWWGG	4 cut(s)	732, 954, 1090, 1754
FalI	AAGNNNNNCTT	4 cut(s)	262, 294, 1074, 1106
FauNDI	CATATG	1 cut(s)	1771
Fnu4HI	GCNGC	7 cut(s)	5, 993, 1187, 1609, 1686, 1865, 2088
FokI	GGATG	8 cut(s)	98, 131, 248, 670, 788, 934, 1027, 1917
FriOI	GRGCYC	1 cut(s)	1803
Fsp4HI	GCNGC	7 cut(s)	5, 993, 1187, 1609, 1686, 1865, 2088
FspBI	CTAG	2 cut(s)	30, 1755
FspI	TGCGCA	1 cut(s)	811
GlaI	GCGC	2 cut(s)	811, 1483
GluI	GCNGC	7 cut(s)	5, 993, 1187, 1609, 1686, 1865, 2088
GsaI	CCCAGC	2 cut(s)	409, 722
HaeIII	GGCC	3 cut(s)	717, 1088, 1730
HapII	CCGG	2 cut(s)	667, 773
HhaI	GCGC	2 cut(s)	812, 1484
Hin6I	GCGC	2 cut(s)	810, 1482
HinP1I	GCGC	2 cut(s)	810, 1482
HindIII	AAGCTT	1 cut(s)	814
HinfI	GANTC	8 cut(s)	77, 104, 425, 1095, 1118, 1150, 2021, 2042
HpaII	CCGG	2 cut(s)	667, 773
HphI	GGTGA	3 cut(s)	71, 1927, 2051
Hpy166II	GTNNAC	3 cut(s)	638, 1008, 1062
Hpy188I	TCNGA	5 cut(s)	116, 181, 577, 946, 2026
Hpy8I	GTNNAC	3 cut(s)	638, 1008, 1062
Hpy99I	CGWCG	1 cut(s)	144
HpyAV	CCTTC	3 cut(s)	827, 1505, 1558
HpyCH4III	ACNGT	3 cut(s)	252, 676, 689
HpyCH4IV	ACGT	2 cut(s)	130, 139
HpyF3I	CTNAG	3 cut(s)	497, 1714, 1741
HpySE526I	ACGT	2 cut(s)	130, 139
HspAI	GCGC	2 cut(s)	810, 1482
KpnI	GGTACC	1 cut(s)	1559
Kzo9I	GATC	6 cut(s)	1180, 1301, 1588, 1632, 1988, 2014
LguI	GCTCTTC	1 cut(s)	1242
LmnI	GCTCC	2 cut(s)	624, 1444
Lsp1109I	GCAGC	5 cut(s)	1004, 1198, 1595, 1672, 1876
MaeI	CTAG	2 cut(s)	30, 1755
MaeII	ACGT	2 cut(s)	130, 139
MaeIII	GTNAC	5 cut(s)	11, 59, 1394, 1459, 1703
MalI	GATC	6 cut(s)	1182, 1303, 1590, 1634, 1990, 2016
MboI	GATC	6 cut(s)	1180, 1301, 1588, 1632, 1988, 2014
MflI	RGATCY	1 cut(s)	1301
MhlI	GDGCHC	4 cut(s)	377, 496, 640, 1803
MlyI	GAGTC	5 cut(s)	71, 98, 1089, 1127, 2030
MmeI	TCCRAC	2 cut(s)	1859, 2058
Mph1103I	ATGCAT	2 cut(s)	113, 244
MroXI	GAANNNNTTC	1 cut(s)	278
MseI	TTAA	7 cut(s)	299, 308, 323, 353, 515, 861, 1329
MslI	CAYNNNNRTG	6 cut(s)	852, 1209, 1373, 1646, 1902, 2072
MspI	CCGG	2 cut(s)	667, 773
MspR9I	CCNGG	4 cut(s)	1238, 1360, 1869, 1913
Mva1269I	GAATGC	1 cut(s)	1369
MvaI	CCWGG	4 cut(s)	1238, 1360, 1869, 1913
NcoI	CCATGG	1 cut(s)	954
NdeI	CATATG	1 cut(s)	1771
NdeII	GATC	6 cut(s)	1180, 1301, 1588, 1632, 1988, 2014
NlaIV	GGNNCC	1 cut(s)	1557
NmeAIII	GCCGAG	2 cut(s)	1756, 1822
NmuCI	GTSAC	2 cut(s)	59, 1459
NsbI	TGCGCA	1 cut(s)	811
NsiI	ATGCAT	2 cut(s)	113, 244
NspI	RCATGY	6 cut(s)	246, 810, 1214, 1581, 1792, 1907
OliI	CACNNNNGTG	1 cut(s)	852
PaeI	GCATGC	2 cut(s)	246, 810
PaeR7I	CTCGAG	1 cut(s)	2018
PciI	ACATGT	3 cut(s)	1210, 1577, 1788
PciSI	GCTCTTC	1 cut(s)	1242
PcsI	WCGNNNNNNNCGW	1 cut(s)	136
PctI	GAATGC	1 cut(s)	1369
PdmI	GAANNNNTTC	1 cut(s)	278
PfeI	GAWTC	3 cut(s)	425, 1150, 2042
PflFI	GACNNNGTC	1 cut(s)	1457
PfoI	TCCNGGA	1 cut(s)	1358
PkrI	GCNGC	7 cut(s)	6, 994, 1188, 1610, 1687, 1866, 2089
PleI	GAGTC	5 cut(s)	71, 98, 1089, 1126, 2029
PmaCI	CACGTG	1 cut(s)	131
PmlI	CACGTG	1 cut(s)	131
PpsI	GAGTC	5 cut(s)	71, 98, 1089, 1126, 2029
Ppu21I	YACGTR	1 cut(s)	131
PscI	ACATGT	3 cut(s)	1210, 1577, 1788
Psp124BI	GAGCTC	1 cut(s)	1803
Psp6I	CCWGG	4 cut(s)	1236, 1358, 1867, 1911
PspCI	CACGTG	1 cut(s)	131
PspEI	GGTNACC	1 cut(s)	59
PspFI	CCCAGC	2 cut(s)	405, 718
PspGI	CCWGG	4 cut(s)	1236, 1358, 1867, 1911
PspN4I	GGNNCC	1 cut(s)	1557
PspPI	GGNCC	4 cut(s)	716, 1087, 1567, 1766
PstI	CTGCAG	1 cut(s)	1188
PsuI	RGATCY	1 cut(s)	1301
PsyI	GACNNNGTC	1 cut(s)	1457
RsaI	GTAC	7 cut(s)	569, 611, 1061, 1209, 1523, 1557, 2063
RsaNI	GTAC	7 cut(s)	568, 610, 1060, 1208, 1522, 1556, 2062
RseI	CAYNNNNRTG	6 cut(s)	852, 1209, 1373, 1646, 1902, 2072
SacI	GAGCTC	1 cut(s)	1803
SapI	GCTCTTC	1 cut(s)	1242
SaqAI	TTAA	7 cut(s)	299, 308, 323, 353, 515, 861, 1329
SatI	GCNGC	7 cut(s)	5, 993, 1187, 1609, 1686, 1865, 2088
Sau3AI	GATC	6 cut(s)	1180, 1301, 1588, 1632, 1988, 2014
Sau96I	GGNCC	4 cut(s)	716, 1087, 1567, 1766
ScaI	AGTACT	1 cut(s)	1523
SchI	GAGTC	5 cut(s)	71, 98, 1089, 1127, 2030
ScrFI	CCNGG	4 cut(s)	1238, 1360, 1869, 1913
SduI	GDGCHC	4 cut(s)	377, 496, 640, 1803
SfcI	CTRYAG	1 cut(s)	1184
Sfr274I	CTCGAG	1 cut(s)	2018
SinI	GGWCC	2 cut(s)	1567, 1766
SlaI	CTCGAG	1 cut(s)	2018
SmiMI	CAYNNNNRTG	6 cut(s)	852, 1209, 1373, 1646, 1902, 2072
SmlI	CTYRAG	1 cut(s)	2018
SmoI	CTYRAG	1 cut(s)	2018
SphI	GCATGC	2 cut(s)	246, 810
SsiI	CCGC	2 cut(s)	415, 822
SspI	AATATT	1 cut(s)	437
SspMI	CTAG	2 cut(s)	30, 1755
SstI	GAGCTC	1 cut(s)	1803
StyD4I	CCNGG	4 cut(s)	1236, 1358, 1867, 1911
StyI	CCWWGG	4 cut(s)	732, 954, 1090, 1754
TaaI	ACNGT	3 cut(s)	252, 676, 689
TaiI	ACGT	2 cut(s)	133, 142
TaqI	TCGA	7 cut(s)	75, 386, 1600, 1635, 2001, 2019, 2070
TatI	WGTACW	3 cut(s)	609, 1207, 1521
TfiI	GAWTC	3 cut(s)	425, 1150, 2042
Tru1I	TTAA	7 cut(s)	299, 308, 323, 353, 515, 861, 1329
Tru9I	TTAA	7 cut(s)	299, 308, 323, 353, 515, 861, 1329
TscAI	CASTG	2 cut(s)	377, 799
TseFI	GTSAC	2 cut(s)	59, 1459
TseI	GCWGC	7 cut(s)	4, 992, 1186, 1608, 1685, 1864, 2087
Tsp45I	GTSAC	2 cut(s)	59, 1459
TspDTI	ATGAA	9 cut(s)	489, 533, 674, 792, 1095, 1307, 1524, 1688, 2043
TspGWI	ACGGA	1 cut(s)	1239
TspRI	CASTG	2 cut(s)	377, 799
Tth111I	GACNNNGTC	1 cut(s)	1457
VneI	GTGCAC	1 cut(s)	636
VpaK11BI	GGWCC	2 cut(s)	1567, 1766
XapI	RAATTY	7 cut(s)	171, 382, 460, 540, 863, 1270, 1627
XceI	RCATGY	6 cut(s)	246, 810, 1214, 1581, 1792, 1907
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1142, 1875
XhoI	CTCGAG	1 cut(s)	2018
XmaJI	CCTAGG	1 cut(s)	1754
XmnI	GAANNNNTTC	1 cut(s)	278
XspI	CTAG	2 cut(s)	30, 1755
ZrmI	AGTACT	1 cut(s)	1523
Zsp2I	ATGCAT	2 cut(s)	113, 244

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.