Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00731

Orthogroup ID

OG0008675

Physical Location & Seq

Genomic Coordinates Forward (+)

15812 .. 18533

Gene Structure 2722 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G015750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ATGGTGGGATTTAGACAAGGATTGCTCAAACAAATCGTAGGTGACCTTGCTTTCACCGACTCCTCACCCTTCGCGAAGCTCTTGGACTCCTGCATCCGAGCCAAGTCGGCGCGTGATGCCCGTCGAGTCCACGCCCGCCTCATCAAAACCCAGTTCTCATCGCAGGTTTTCAGTCAGAACAGGCTCATCGACGCGTGTAGGAAATGTGGTTCGTTCGATGATGCACGTAATGTGTTTGATAAAATGCCTGAGAGGAACACTTTCAGTTGGAACTGCATCATTACCGCATTTACGGAGTTGGGTTTTGTTGATGAGGCTTTGCAGAGTTTTAGGTCGATGCCGGAGCCTGACCAGTGCTCATGGAACTCGATGGTTTCGGGGTTTGCGCAGCAGCATGGTCGCTTTGAGGATGCTTTGGAATATTTTGTTAACTTGCATGGGGAGGATTTTGTTCTTAATGAATACACATTCGGTAGTGCTCTTAGTACTTGTGCGGGTTTAAGAGAGCTGAAAATGGGTGTCCAAATTCATGGTTTCATTGCGAAATATTGTTACTGTTCGGATGTTTATATGGGGTCTGCACTTATTGATATGTACTCAAAATGTGGGAATTCTGTGCGAAATGTTGTTTCTTGGAACAGTTTGATTACTTGTTACGAGCAAAATGGTCCAGCAAGTGAAGCCGTACAAGTGTTTGTGAGGATGATGGATTGTGGGTTCAAACCAGACGAGTTGACTTTAGCCAGTATGGTGAGTGCTTGTGCGAGCTTGTCCGCAGTGGAAGAAGGTCGGCAAATACATGCTTGTGTTATGAAATGTGATAAGTACAGGAATGATGTTGTATTGTGCAATGCATTAGTTGATATGTATGCAAAATGCAACAGAATAAATGAGGCCAGAAGGGTTTTTGATGGGATGCCTATCAGAAATGTGGTCTCAGAAACTTCTATGGTAAGTGGATATGCAAAGGCAGCAAGTGTAAAAGTTGCAAGATCGATGTTTACAAAGATGATGGAGAGGAATGTAAATGGAGAGAATGAAGAGGCCCTTGGACTCTTTCTCCTCCTGAAAAGAGAGTCTGTTTGGCCCACCCACTACACATTTACGAATCTACTCAATGCTTGTGCAAGTCTTGTTGATCTGCAGCTTGGCAGGCAAGCTCATTCACACATATTGGAGCATGGTTTTCAATTCCAGGTTGGTGAAGAGCCTGATATATTTGTTGGAAATTCTCTAATAGATATGTACATGAAATGTGGGTCTATTGAAGATGGCTGTCAGATGTTTAGAAATATGGTGGAAAGGGATCATGTCTCATGGAATGCTATGATTGTGGGACATGCGCAAAATGGGGAGCAACTAGACCATGTTACTATGATTGGTGTTCTATGTGCTTGTAGCCACGCAGGATTGGTTGAAGTAGGGAGAAATTATTTTTACATGATGAATGAAGAGCACGGGGTGGTACCATTAAAGGACCATTATACATGTATGGTTGATCTACTTGGTCGAGCTGGTTGCTTTGACGAAGCTAAGAATTTAATAGAGGTCATGCCAATGCAACCTGATGCCATTATATGGGGTTCTTTGCTTGCTACTTGTAAAGTTCATCGTAACATTACCTTGGGGAAATATGTGGCTGAGAAGCTATTAGCCATTGAACCTAGGAATTCTGGACCTTATGTTCTTCTCTCAAACACGCATGCTGAGCTTGGGAGGTGGAGTGATGTTGGTGTCGTCAAGCAGCCGGGTTGCAGTTGGATTGAAACACAGGGTCATCTGAATGTTTTCCTGGTGAAAGATAAAAGGCATTCTCAAAAGAAGGAAATCTATTGTCTTTTGAAGTTGCTCACAGAACAAATGAAAAAAAAAAAGAAGAGCAAAATCAGCAGCAGACTATTCAGCTACAGTCTGCAGCATTGGATAATCTTAAGCCGCAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009451 GO:0009743 GO:0009756 GO:0009987 GO:0010033 GO:0010182 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0023052 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

647

Amino Acids

72.91

Weight (kDa)

7.23

Isoelectric Point (pI)

45.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	207 - 255	1.1e-09	PPR repeat family
PPR	PF01535	210 - 240	2.5e-06	PPR repeat
E_motif	PF20431	537 - 589	7.9e-11	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008675)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13600
fragaria_vesca	FvH4_7g02360 FvH4_7g02360
malus_domestica	MD02G1294800.v1.1 MD07G1031100.v1.1 MD07G1032100.v1.1
prunus_persica	Prupe.7G009700_v2.0.a1
pyrus_communis	pycom07g02270
rosa_chinensis	RchiOBHm_Chr1g0319691 RchiOBHm_Chr7g0218591
rosa_laevigata	RLG00000002327 RLG00000030463
rosa_multiflora	Rmu_sc0001301.1_g000024
rosa_roxburghii	Rroxscaffold_3G00240770
rosa_rugosa	Rorug01G0029400 Rorug07G0178600
rosa_samantha	Rh1BG038400 Rh7AG319700 Rh7BG311700 Rh7CG336600 Rh7DG318700
rosa_wichuraiana	Rw0G015750 Rw7G027230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	387, 1344
Acc36I	ACCTGC	1 cut(s)	154
Acc65I	GGTACC	1 cut(s)	1465
AccB1I	GGYRCC	1 cut(s)	1465
AccB7I	CCANNNNNTGG	1 cut(s)	1578
AccII	CGCG	3 cut(s)	74, 112, 194
AciI	CCGC	5 cut(s)	136, 285, 494, 774, 1936
AclWI	GGATC	1 cut(s)	1314
AcsI	RAATTY	5 cut(s)	525, 610, 1228, 1537, 1669
AdeI	CACNNNGTG	1 cut(s)	1462
AfaI	GTAC	6 cut(s)	487, 596, 687, 827, 1247, 1467
AfiI	CCNNNNNNNGG	1 cut(s)	1578
AflII	CTTAAG	1 cut(s)	1930
AflIII	ACRYGT	2 cut(s)	192, 1487
AgsI	TTSAA	7 cut(s)	721, 1190, 1268, 1418, 1661, 1766, 1843
AjnI	CCWGG	2 cut(s)	1194, 1791
AjuI	GAANNNNNNNTTGG	2 cut(s)	1032, 1064
AloI	GAACNNNNNNTCC	6 cut(s)	193, 225, 701, 733, 1668, 1700
Alw21I	GWGCWC	3 cut(s)	359, 481, 1458
Alw26I	GTCTC	2 cut(s)	940, 1318
AlwI	GGATC	1 cut(s)	1314
AoxI	GGCC	3 cut(s)	894, 1044, 1085
ApeKI	GCWGC	7 cut(s)	388, 391, 971, 1144, 1744, 1890, 1915
ApoI	RAATTY	5 cut(s)	525, 610, 1228, 1537, 1669
Asp700I	GAANNNNTTC	2 cut(s)	260, 1787
Asp718I	GGTACC	1 cut(s)	1465
AspA2I	CCTAGG	1 cut(s)	1664
AspLEI	GCGC	3 cut(s)	112, 388, 1345
AspS9I	GGNCC	5 cut(s)	668, 1045, 1086, 1477, 1676
AsuC2I	CCSGG	1 cut(s)	1749
AsuHPI	GGTGA	6 cut(s)	46, 53, 57, 763, 1214, 1807
AvaII	GGWCC	3 cut(s)	668, 1477, 1676
AvrII	CCTAGG	1 cut(s)	1664
BanI	GGYRCC	1 cut(s)	1465
Bbv12I	GWGCWC	3 cut(s)	359, 481, 1458
BbvI	GCAGC	7 cut(s)	400, 403, 983, 1156, 1756, 1902, 1927
BccI	CCATC	5 cut(s)	364, 700, 905, 1006, 1265
BceAI	ACGGC	1 cut(s)	668
BcgI	CGANNNNNNTGC	4 cut(s)	380, 414, 1500, 1534
BciT130I	CCWGG	2 cut(s)	1196, 1793
BcnI	CCSGG	1 cut(s)	1749
BcoDI	GTCTC	2 cut(s)	940, 1318
BfaI	CTAG	2 cut(s)	1361, 1665
BfmI	CTRYAG	3 cut(s)	1142, 1906, 1913
BfrI	CTTAAG	1 cut(s)	1930
BfuAI	ACCTGC	1 cut(s)	154
BglI	GCCNNNNNGGC	1 cut(s)	107
BisI	GCNGC	8 cut(s)	389, 392, 972, 1145, 1745, 1891, 1916, 1936
BlnI	CCTAGG	1 cut(s)	1664
BlpI	GCTNAGC	1 cut(s)	1707
BlsI	GCNGC	8 cut(s)	390, 393, 973, 1146, 1746, 1892, 1917, 1937
BmcAI	AGTACT	1 cut(s)	487
Bme1390I	CCNGG	3 cut(s)	1196, 1749, 1793
Bme18I	GGWCC	3 cut(s)	668, 1477, 1676
BmgT120I	GGNCC	5 cut(s)	668, 1045, 1086, 1477, 1676
BmiI	GGNNCC	2 cut(s)	345, 1467
BmrFI	CCNGG	3 cut(s)	1196, 1749, 1793
BmrI	ACTGGG	1 cut(s)	145
BmsI	GCATC	8 cut(s)	102, 106, 211, 285, 327, 400, 906, 1558
BmuI	ACTGGG	1 cut(s)	145
Bpu1102I	GCTNAGC	1 cut(s)	1707
BpuMI	CCSGG	1 cut(s)	1749
Bsa29I	ATCGAT	1 cut(s)	995
BsaAI	YACGTR	1 cut(s)	227
BsaBI	GATNNNNATC	1 cut(s)	920
BsaI	GGTCTC	1 cut(s)	940
BsaJI	CCNNGG	3 cut(s)	1048, 1623, 1664
BsaXI	ACNNNNNCTCC	4 cut(s)	1044, 1074, 1708, 1738
Bsc4I	CCNNNNNNNGG	1 cut(s)	1578
Bse1I	ACTGG	3 cut(s)	151, 352, 744
Bse3DI	GCAATG	2 cut(s)	537, 856
Bse8I	GATNNNNATC	1 cut(s)	920
BseBI	CCWGG	2 cut(s)	1196, 1793
BseCI	ATCGAT	1 cut(s)	995
BseDI	CCNNGG	3 cut(s)	1048, 1623, 1664
BseGI	GGATG	5 cut(s)	93, 415, 568, 708, 921
BseJI	GATNNNNATC	1 cut(s)	920
BseLI	CCNNNNNNNGG	1 cut(s)	1578
BseMI	GCAATG	2 cut(s)	537, 856
BseMII	CTCAG	4 cut(s)	240, 951, 1632, 1698
BseNI	ACTGG	3 cut(s)	151, 352, 744
BseRI	GAGGAG	2 cut(s)	52, 1052
BseXI	GCAGC	7 cut(s)	400, 403, 983, 1156, 1756, 1902, 1927
BsgI	GTGCAG	1 cut(s)	564
Bsh1236I	CGCG	3 cut(s)	74, 112, 194
BshFI	GGCC	3 cut(s)	896, 1046, 1087
BshNI	GGYRCC	1 cut(s)	1465
BshVI	ATCGAT	1 cut(s)	995
BsiHKAI	GWGCWC	3 cut(s)	359, 481, 1458
BsiSI	CCGG	2 cut(s)	341, 1748
BslFI	GGGAC	1 cut(s)	1350
BslI	CCNNNNNNNGG	1 cut(s)	1578
BsmAI	GTCTC	2 cut(s)	940, 1318
BsmFI	GGGAC	1 cut(s)	1350
BsmI	GAATGC	2 cut(s)	1327, 1810
BsnI	GGCC	3 cut(s)	896, 1046, 1087
Bso31I	GGTCTC	1 cut(s)	940
Bsp1286I	GDGCHC	3 cut(s)	359, 481, 1458
Bsp1407I	TGTACA	1 cut(s)	1245
Bsp143I	GATC	4 cut(s)	992, 1138, 1306, 1498
Bsp1720I	GCTNAGC	1 cut(s)	1707
Bsp68I	TCGCGA	1 cut(s)	74
BspACI	CCGC	5 cut(s)	136, 285, 494, 774, 1936
BspANI	GGCC	3 cut(s)	896, 1046, 1087
BspCNI	CTCAG	4 cut(s)	241, 950, 1633, 1699
BspDI	ATCGAT	1 cut(s)	995
BspFNI	CGCG	3 cut(s)	74, 112, 194
BspLI	GGNNCC	2 cut(s)	345, 1467
BspMAI	CTGCAG	2 cut(s)	1146, 1917
BspMI	ACCTGC	1 cut(s)	154
BspPI	GGATC	1 cut(s)	1314
BspQI	GCTCTTC	3 cut(s)	1200, 1446, 1871
BspT107I	GGYRCC	1 cut(s)	1465
BspTI	CTTAAG	1 cut(s)	1930
BspTNI	GGTCTC	1 cut(s)	940
BsrDI	GCAATG	2 cut(s)	537, 856
BsrGI	TGTACA	1 cut(s)	1245
BsrI	ACTGG	3 cut(s)	151, 352, 744
BssECI	CCNNGG	3 cut(s)	1048, 1623, 1664
BssMI	GATC	4 cut(s)	992, 1138, 1306, 1498
BssT1I	CCWWGG	3 cut(s)	1048, 1623, 1664
Bst2UI	CCWGG	2 cut(s)	1196, 1793
Bst4CI	ACNGT	3 cut(s)	557, 641, 1910
Bst6I	CTCTTC	4 cut(s)	1035, 1200, 1446, 1871
BstAFI	CTTAAG	1 cut(s)	1930
BstAUI	TGTACA	1 cut(s)	1245
BstBAI	YACGTR	1 cut(s)	227
BstC8I	GCNNGC	6 cut(s)	136, 766, 1154, 1158, 1593, 1704
BstDEI	CTNAG	6 cut(s)	249, 482, 937, 1533, 1641, 1707
BstEII	GGTNACC	1 cut(s)	41
BstF5I	GGATG	5 cut(s)	93, 415, 568, 708, 921
BstFNI	CGCG	3 cut(s)	74, 112, 194
BstHHI	GCGC	3 cut(s)	112, 388, 1345
BstKTI	GATC	4 cut(s)	995, 1141, 1309, 1501
BstMAI	GTCTC	2 cut(s)	940, 1318
BstMBI	GATC	4 cut(s)	992, 1138, 1306, 1498
BstMWI	GCNNNNNNNGC	7 cut(s)	107, 116, 680, 971, 1153, 1708, 1887
BstNI	CCWGG	2 cut(s)	1196, 1793
BstNSI	RCATGY	4 cut(s)	803, 1343, 1491, 1706
BstPI	GGTNACC	1 cut(s)	41
BstSCI	CCNGG	3 cut(s)	1194, 1747, 1791
BstSFI	CTRYAG	3 cut(s)	1142, 1906, 1913
BstUI	CGCG	3 cut(s)	74, 112, 194
BstV1I	GCAGC	7 cut(s)	400, 403, 983, 1156, 1756, 1902, 1927
BstXI	CCANNNNNNTGG	1 cut(s)	530
Bsu15I	ATCGAT	1 cut(s)	995
BsuRI	GGCC	3 cut(s)	896, 1046, 1087
BsuTUI	ATCGAT	1 cut(s)	995
BtgZI	GCGATG	1 cut(s)	144
BtsCI	GGATG	5 cut(s)	93, 415, 568, 708, 921
BtsI	GCAGTG	1 cut(s)	783
BtsIMutI	CAGTG	2 cut(s)	359, 783
BtuMI	TCGCGA	1 cut(s)	74
BveI	ACCTGC	1 cut(s)	154
Cac8I	GCNNGC	6 cut(s)	136, 766, 1154, 1158, 1593, 1704
CfoI	GCGC	3 cut(s)	112, 388, 1345
Cfr13I	GGNCC	5 cut(s)	668, 1045, 1086, 1477, 1676
ClaI	ATCGAT	1 cut(s)	995
CseI	GACGC	1 cut(s)	200
Csp6I	GTAC	6 cut(s)	486, 595, 686, 826, 1246, 1466
CviQI	GTAC	6 cut(s)	486, 595, 686, 826, 1246, 1466
DdeI	CTNAG	6 cut(s)	249, 482, 937, 1533, 1641, 1707
DpnI	GATC	4 cut(s)	994, 1140, 1308, 1500
DpnII	GATC	4 cut(s)	992, 1138, 1306, 1498
DraIII	CACNNNGTG	1 cut(s)	1462
Eam1104I	CTCTTC	4 cut(s)	1035, 1200, 1446, 1871
EarI	CTCTTC	4 cut(s)	1035, 1200, 1446, 1871
Eco130I	CCWWGG	3 cut(s)	1048, 1623, 1664
Eco31I	GGTCTC	1 cut(s)	940
Eco47I	GGWCC	3 cut(s)	668, 1477, 1676
Eco91I	GGTNACC	1 cut(s)	41
EcoO109I	RGGNCCY	1 cut(s)	1045
EcoO65I	GGTNACC	1 cut(s)	41
EcoRI	GAATTC	2 cut(s)	610, 1669
EcoRII	CCWGG	2 cut(s)	1194, 1791
EcoT14I	CCWWGG	3 cut(s)	1048, 1623, 1664
EcoT22I	ATGCAT	1 cut(s)	856
ErhI	CCWWGG	3 cut(s)	1048, 1623, 1664
FalI	AAGNNNNNCTT	2 cut(s)	1032, 1064
FaqI	GGGAC	1 cut(s)	1350
FauI	CCCGC	2 cut(s)	143, 487
Fnu4HI	GCNGC	8 cut(s)	389, 392, 972, 1145, 1745, 1891, 1916, 1936
FokI	GGATG	5 cut(s)	80, 422, 575, 715, 928
Fsp4HI	GCNGC	8 cut(s)	389, 392, 972, 1145, 1745, 1891, 1916, 1936
FspBI	CTAG	2 cut(s)	1361, 1665
FspI	TGCGCA	2 cut(s)	387, 1344
GlaI	GCGC	3 cut(s)	111, 387, 1344
GluI	GCNGC	8 cut(s)	389, 392, 972, 1145, 1745, 1891, 1916, 1936
HaeIII	GGCC	3 cut(s)	896, 1046, 1087
HapII	CCGG	2 cut(s)	341, 1748
HgaI	GACGC	1 cut(s)	200
HhaI	GCGC	3 cut(s)	112, 388, 1345
Hin6I	GCGC	3 cut(s)	110, 386, 1343
HinP1I	GCGC	3 cut(s)	110, 386, 1343
HincII	GTYRAC	2 cut(s)	430, 735
HindII	GTYRAC	2 cut(s)	430, 735
HinfI	GANTC	6 cut(s)	59, 86, 126, 1053, 1076, 1108
HpaI	GTTAAC	1 cut(s)	430
HpaII	CCGG	2 cut(s)	341, 1748
HphI	GGTGA	6 cut(s)	46, 53, 57, 763, 1214, 1807
Hpy166II	GTNNAC	4 cut(s)	130, 430, 735, 1002
Hpy188I	TCNGA	7 cut(s)	98, 177, 562, 926, 940, 1281, 1782
Hpy188III	TCNNGA	3 cut(s)	73, 1066, 1674
Hpy8I	GTNNAC	4 cut(s)	130, 430, 735, 1002
Hpy99I	CGWCG	2 cut(s)	126, 194
HpyAV	CCTTC	4 cut(s)	79, 779, 894, 1816
HpyCH4III	ACNGT	3 cut(s)	557, 641, 1910
HpyCH4IV	ACGT	1 cut(s)	226
HpyF10VI	GCNNNNNNNGC	7 cut(s)	107, 116, 680, 971, 1153, 1708, 1887
HpyF3I	CTNAG	6 cut(s)	249, 482, 937, 1533, 1641, 1707
HpySE526I	ACGT	1 cut(s)	226
HspAI	GCGC	3 cut(s)	110, 386, 1343
KpnI	GGTACC	1 cut(s)	1469
KspAI	GTTAAC	1 cut(s)	430
Kzo9I	GATC	4 cut(s)	992, 1138, 1306, 1498
LguI	GCTCTTC	3 cut(s)	1200, 1446, 1871
LmnI	GCTCC	3 cut(s)	343, 1177, 1354
Lsp1109I	GCAGC	7 cut(s)	400, 403, 983, 1156, 1756, 1902, 1927
LweI	GCATC	8 cut(s)	102, 106, 211, 285, 327, 400, 906, 1558
MaeI	CTAG	2 cut(s)	1361, 1665
MaeII	ACGT	1 cut(s)	226
MaeIII	GTNAC	5 cut(s)	41, 551, 653, 1369, 1613
MalI	GATC	4 cut(s)	994, 1140, 1308, 1500
MboI	GATC	4 cut(s)	992, 1138, 1306, 1498
MboII	GAAGA	7 cut(s)	794, 1052, 1217, 1280, 1463, 1679, 1888
MhlI	GDGCHC	3 cut(s)	359, 481, 1458
MluCI	AATT	7 cut(s)	525, 610, 1190, 1228, 1429, 1537, 1669
MluI	ACGCGT	1 cut(s)	192
MlyI	GAGTC	5 cut(s)	53, 80, 135, 1047, 1085
MmeI	TCCRAC	3 cut(s)	248, 1204, 1739
Mph1103I	ATGCAT	1 cut(s)	856
MroXI	GAANNNNTTC	2 cut(s)	260, 1787
MseI	TTAA	7 cut(s)	429, 456, 500, 1472, 1541, 1931, 1942
MslI	CAYNNNNRTG	3 cut(s)	804, 1556, 1782
MspCI	CTTAAG	1 cut(s)	1930
MspI	CCGG	2 cut(s)	341, 1748
MspR9I	CCNGG	3 cut(s)	1196, 1749, 1793
Mva1269I	GAATGC	2 cut(s)	1327, 1810
MvaI	CCWGG	2 cut(s)	1196, 1793
MvnI	CGCG	3 cut(s)	74, 112, 194
MwoI	GCNNNNNNNGC	7 cut(s)	107, 116, 680, 971, 1153, 1708, 1887
NciI	CCSGG	1 cut(s)	1749
NdeII	GATC	4 cut(s)	992, 1138, 1306, 1498
NlaIV	GGNNCC	2 cut(s)	345, 1467
NmuCI	GTSAC	1 cut(s)	41
NruI	TCGCGA	1 cut(s)	74
NsbI	TGCGCA	2 cut(s)	387, 1344
NsiI	ATGCAT	1 cut(s)	856
NspI	RCATGY	4 cut(s)	803, 1343, 1491, 1706
PaeI	GCATGC	1 cut(s)	1706
PciI	ACATGT	1 cut(s)	1487
PciSI	GCTCTTC	3 cut(s)	1200, 1446, 1871
PctI	GAATGC	2 cut(s)	1327, 1810
PdmI	GAANNNNTTC	2 cut(s)	260, 1787
PfeI	GAWTC	1 cut(s)	1108
PflMI	CCANNNNNTGG	1 cut(s)	1578
PkrI	GCNGC	8 cut(s)	390, 393, 973, 1146, 1746, 1892, 1917, 1937
PleI	GAGTC	5 cut(s)	53, 80, 134, 1047, 1084
PpsI	GAGTC	5 cut(s)	53, 80, 134, 1047, 1084
Ppu21I	YACGTR	1 cut(s)	227
PscI	ACATGT	1 cut(s)	1487
Psp6I	CCWGG	2 cut(s)	1194, 1791
PspEI	GGTNACC	1 cut(s)	41
PspGI	CCWGG	2 cut(s)	1194, 1791
PspN4I	GGNNCC	2 cut(s)	345, 1467
PspPI	GGNCC	5 cut(s)	668, 1045, 1086, 1477, 1676
PstI	CTGCAG	2 cut(s)	1146, 1917
RruI	TCGCGA	1 cut(s)	74
RsaI	GTAC	6 cut(s)	487, 596, 687, 827, 1247, 1467
RsaNI	GTAC	6 cut(s)	486, 595, 686, 826, 1246, 1466
RseI	CAYNNNNRTG	3 cut(s)	804, 1556, 1782
SapI	GCTCTTC	3 cut(s)	1200, 1446, 1871
SaqAI	TTAA	7 cut(s)	429, 456, 500, 1472, 1541, 1931, 1942
SatI	GCNGC	8 cut(s)	389, 392, 972, 1145, 1745, 1891, 1916, 1936
Sau3AI	GATC	4 cut(s)	992, 1138, 1306, 1498
Sau96I	GGNCC	5 cut(s)	668, 1045, 1086, 1477, 1676
ScaI	AGTACT	1 cut(s)	487
SchI	GAGTC	5 cut(s)	53, 80, 135, 1047, 1085
ScrFI	CCNGG	3 cut(s)	1196, 1749, 1793
SduI	GDGCHC	3 cut(s)	359, 481, 1458
SfaNI	GCATC	8 cut(s)	102, 106, 211, 285, 327, 400, 906, 1558
SfcI	CTRYAG	3 cut(s)	1142, 1906, 1913
SinI	GGWCC	3 cut(s)	668, 1477, 1676
SmiMI	CAYNNNNRTG	3 cut(s)	804, 1556, 1782
SmlI	CTYRAG	1 cut(s)	1930
SmoI	CTYRAG	1 cut(s)	1930
SphI	GCATGC	1 cut(s)	1706
Sse9I	AATT	7 cut(s)	525, 610, 1190, 1228, 1429, 1537, 1669
SsiI	CCGC	5 cut(s)	136, 285, 494, 774, 1936
SspI	AATATT	2 cut(s)	422, 548
SspMI	CTAG	2 cut(s)	1361, 1665
StyD4I	CCNGG	3 cut(s)	1194, 1747, 1791
StyI	CCWWGG	3 cut(s)	1048, 1623, 1664
TaaI	ACNGT	3 cut(s)	557, 641, 1910
TaiI	ACGT	1 cut(s)	229
TaqI	TCGA	7 cut(s)	124, 189, 216, 335, 368, 995, 1510
TasI	AATT	7 cut(s)	525, 610, 1190, 1228, 1429, 1537, 1669
TatI	WGTACW	4 cut(s)	485, 594, 825, 1245
TauI	GCSGC	1 cut(s)	1938
TfiI	GAWTC	1 cut(s)	1108
Tru1I	TTAA	7 cut(s)	429, 456, 500, 1472, 1541, 1931, 1942
Tru9I	TTAA	7 cut(s)	429, 456, 500, 1472, 1541, 1931, 1942
TscAI	CASTG	2 cut(s)	359, 783
TseFI	GTSAC	1 cut(s)	41
TseI	GCWGC	7 cut(s)	388, 391, 971, 1144, 1744, 1890, 1915
Tsp45I	GTSAC	1 cut(s)	41
TspGWI	ACGGA	1 cut(s)	308
TspRI	CASTG	2 cut(s)	359, 783
Van91I	CCANNNNNTGG	1 cut(s)	1578
Vha464I	CTTAAG	1 cut(s)	1930
VpaK11BI	GGWCC	3 cut(s)	668, 1477, 1676
XapI	RAATTY	5 cut(s)	525, 610, 1228, 1537, 1669
XceI	RCATGY	4 cut(s)	803, 1343, 1491, 1706
XmaJI	CCTAGG	1 cut(s)	1664
XmnI	GAANNNNTTC	2 cut(s)	260, 1787
XspI	CTAG	2 cut(s)	1361, 1665
ZrmI	AGTACT	1 cut(s)	487
Zsp2I	ATGCAT	1 cut(s)	856

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.