Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0008675

Physical Location & Seq

Genomic Coordinates Reverse (-)

1306100 .. 1309433

Gene Structure 3334 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G009700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGGGAACTAGACATGGATTGTTCAAACAACTTGTGGGTGACCTCTCTTTCCTCGACTCTACACCCTTTGCGAAGCTCTTGGATTCATGCATTCGAACCAAGTCAGCACGCGATGCACATCGCATCCACGCTCGTGTCATCAAAACCCAATTTTCCTCAGAGATTTTTATCCAGAATAGGCTTATTGATGCTTATGGAAAATGTGGTTGTTTGGACGATGCACGTAAATTGTTTGATAAAATGCCTCAAAGGAACACTTTCACTTGGAACTCCATCATAAGTACATTAACGAAGTTGGGTTTTATTGATGACGCTGTGCAGATTTTTAGGTTAATGCCTGAGCCTGACCAGTGCTCGTGGAATTCGATGGTATCAGGGTTTGCCCAGCATGATCGCTTTGAAGAAGCTTTGGAGTACTTTGTCAAATTGCATGTGGAGGATTTTGTGCTTAATGAATACTCGTTCGGTAGTGCTCTTAGTGCTTGTGCAGGTTTGAGAAAGTTGAAAATGGGTGTCCAAATTCATGCTTTTATTGCTAAGTCATGTTACTCGTCAGATGTTTATATGGGATCTGCACTTATTGATATGTACTCTAAATGTGGGAGTGTTGCTTCTGCACAAAGAGTTTTTGATTGGATGAGTGACCGGAATACAGTTTCTTGGAACAGTTTGATTACTTGTTATGAGCAGAATGGTCCAGCGAGTGAAGCCCTAGAAGTTTTTGTGAGGATGATGGATGGTGGGTTCAAACCAGATGAGTTAACTTTAGCCAGTGTGGTTAGTGCATGTGCAAGCTTGTCTGCAATAAAGGAAGGTCAGCAAATATATGCTCATGTCATAAAATGTGACAAATACAGGGATGATCTTGTTTTAGGCAATGCGTTGGTTGATATGTATGCAAAATGCAATAGATTAAAGCAAGCCAGATGGATTTTTGATGGGATGCCTGTTAGAAATGTTGTCTCCGAAACATCAATGGTAAGTGGATATGCAAAAGCGGCAAGCGTAAAAGCTGCAAGATTGATGTTTGCAAAGATGATGGAAAGGAATATAGTCTCTTGGAATGCACTTATTTCAGGGTACACACAAAATGGGGAAAATGAAGAGGCTGTTGGACTCTTTCTCCTCCTGAAGAGGGAGTCTGTTTTGCCAACCCACTATACATTTGGGAATCTACTCAATGCTTGTGCAAGTCTAGTTGATCTGCAGCTTGGCAGGCAGGCTCATGTACACTTATTGAAACACGGATTTAAGTTCCAGGTTGGGGAAGAGCCTGATATTTTTGTGGGAAATTCTCTAATAGATATGTACATGAAATGTGGATCCATTGAAGATGGATGTCGGGTGTTTAAAAGTATGTTGGAAAGGGATTATGTCTCCTGGAATGCCATGATTGTGGGGTATGCACAAAATGGTTATGGGACTGAAGCTCTCGAAATATTTAGAAAAATGTTGGCATCTGGGGAGCAACCTGACCATGTCACTATGATTGGTGTTCTATGCGCTTGTAGCCACGCAGGGTTGGTTGATGAAGGAAAAGAATATTTTTACTCTATGAGTGAAGAGCATGGTTTGGTACCATTGAAGGACCATTATACATGTATGGTTGATCTACTTGGTCGAGCTGGTTGCCTTGATGAAGCCAAACATTTAATAGAGGTCATGCCAATGCAACCTGATGCTGTTATATGGGGGTCTTTGCTTGCTGCTTGTAAAGTTCATCGTAACATTACCTTAGGGAAGTATGTGGCGGAGAAGATCTTAGATATTGAACCTAGGAACTCTGGACCTTATGTTCTTCTCTCAAACATGTACGCCGAGCTCGGGAGATGGGGTGATGTTGTAACAGTAAGAAAGCTGATGAGGCAACGGGGAGTTATCAAGCAGCCAGGTTGCAGTTGGATTGAGATACAGGGTCGTGTGCATGTTTTCATGGTGAAAGATAAAAGGCATCCTCAATGCAAGGAAATACATTATCTATTGAAGTTGCTCATTGAACAGATGAAGCAATCCGGATATGTCGAAGATGCTTGTGATCACGATATTTGTGAAGAACATGGTGAAACAGAACTAACCTCATTGTACGACATTGATATGTTGGAAGATGCAGCTCTCGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009451 GO:0009743 GO:0009756 GO:0009987 GO:0010033 GO:0010182 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0023052 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

707

Amino Acids

79.37

Weight (kDa)

6.02

Isoelectric Point (pI)

42.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008675)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13600
fragaria_vesca	FvH4_7g02360 FvH4_7g02360
malus_domestica	MD02G1294800.v1.1 MD07G1031100.v1.1 MD07G1032100.v1.1
prunus_persica	Prupe.7G009700_v2.0.a1
pyrus_communis	pycom07g02270
rosa_chinensis	RchiOBHm_Chr1g0319691 RchiOBHm_Chr7g0218591
rosa_laevigata	RLG00000002327 RLG00000030463
rosa_multiflora	Rmu_sc0001301.1_g000024
rosa_roxburghii	Rroxscaffold_3G00240770
rosa_rugosa	Rorug01G0029400 Rorug07G0178600
rosa_samantha	Rh1BG038400 Rh7AG319700 Rh7BG311700 Rh7CG336600 Rh7DG318700
rosa_wichuraiana	Rw0G015750 Rw7G027230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	479
Acc65I	GGTACC	1 cut(s)	1576
AccB1I	GGYRCC	1 cut(s)	1576
AccII	CGCG	1 cut(s)	111
AccIII	TCCGGA	1 cut(s)	2012
AciI	CCGC	2 cut(s)	998, 1751
AclWI	GGATC	3 cut(s)	577, 1317, 1330
AcsI	RAATTY	3 cut(s)	361, 519, 1291
AcuI	CTGAAG	2 cut(s)	1151, 1446
AfaI	GTAC	9 cut(s)	283, 416, 590, 1082, 1230, 1310, 1578, 1814, 2084
AfiI	CCNNNNNNNGG	3 cut(s)	1135, 1264, 1824
AflIII	ACRYGT	2 cut(s)	1598, 1809
AjnI	CCWGG	3 cut(s)	1257, 1379, 1888
AjuI	GAANNNNNNNTTGG	2 cut(s)	1095, 1127
AleI	CACNNNNGTG	1 cut(s)	132
AloI	GAACNNNNNNTCC	4 cut(s)	728, 760, 1779, 1811
Alw21I	GWGCWC	3 cut(s)	356, 475, 1824
Alw26I	GTCTC	3 cut(s)	967, 1060, 1381
AlwI	GGATC	3 cut(s)	577, 1317, 1330
Ama87I	CYCGRG	2 cut(s)	1823, 2114
Aor13HI	TCCGGA	1 cut(s)	2012
ApeKI	GCWGC	5 cut(s)	1013, 1207, 1706, 1885, 2108
ApoI	RAATTY	3 cut(s)	361, 519, 1291
Asp700I	GAANNNNTTC	1 cut(s)	257
Asp718I	GGTACC	1 cut(s)	1576
AspA2I	CCTAGG	1 cut(s)	1775
AspLEI	GCGC	1 cut(s)	1505
AspS9I	GGNCC	3 cut(s)	695, 1588, 1787
AsuHPI	GGTGA	4 cut(s)	50, 1847, 1948, 2072
AsuII	TTCGAA	1 cut(s)	94
AvaI	CYCGRG	2 cut(s)	1823, 2114
AvaII	GGWCC	3 cut(s)	695, 1588, 1787
AvrII	CCTAGG	1 cut(s)	1775
AxyI	CCTNAGG	1 cut(s)	1735
BamHI	GGATCC	1 cut(s)	1322
BanI	GGYRCC	1 cut(s)	1576
BanII	GRGCYC	1 cut(s)	1824
BauI	CACGAG	2 cut(s)	132, 355
Bbv12I	GWGCWC	3 cut(s)	356, 475, 1824
BbvI	GCAGC	4 cut(s)	1000, 1219, 1693, 1897
BccI	CCATC	9 cut(s)	281, 361, 727, 731, 921, 932, 1033, 1328, 1824
BcgI	CGANNNNNNTGC	2 cut(s)	1611, 1645
BciT130I	CCWGG	3 cut(s)	1259, 1381, 1890
BclI	TGATCA	1 cut(s)	2035
BcoDI	GTCTC	3 cut(s)	967, 1060, 1381
BfaI	CTAG	4 cut(s)	9, 713, 1196, 1776
BfmI	CTRYAG	1 cut(s)	1205
BfuAI	ACCTGC	1 cut(s)	479
BglII	AGATCT	1 cut(s)	1758
BisI	GCNGC	6 cut(s)	999, 1014, 1208, 1707, 1886, 2109
BlnI	CCTAGG	1 cut(s)	1775
BlsI	GCNGC	6 cut(s)	1000, 1015, 1209, 1708, 1887, 2110
BmcAI	AGTACT	1 cut(s)	416
Bme1390I	CCNGG	3 cut(s)	1259, 1381, 1890
Bme18I	GGWCC	3 cut(s)	695, 1588, 1787
BmeT110I	CYCGRG	2 cut(s)	1823, 2114
BmgT120I	GGNCC	3 cut(s)	695, 1588, 1787
BmiI	GGNNCC	2 cut(s)	1324, 1578
BmrFI	CCNGG	3 cut(s)	1259, 1381, 1890
Bpu10I	CCTNAGC	1 cut(s)	339
Bpu14I	TTCGAA	1 cut(s)	94
BsaAI	YACGTR	1 cut(s)	224
BsaBI	GATNNNNATC	2 cut(s)	117, 167
BsaJI	CCNNGG	1 cut(s)	1775
BsaWI	WCCGGW	2 cut(s)	645, 2012
BsaXI	ACNNNNNCTCC	4 cut(s)	1107, 1137, 1819, 1849
Bsc4I	CCNNNNNNNGG	3 cut(s)	1135, 1264, 1824
Bse1I	ACTGG	2 cut(s)	349, 771
Bse21I	CCTNAGG	1 cut(s)	1735
Bse3DI	GCAATG	1 cut(s)	883
Bse8I	GATNNNNATC	2 cut(s)	117, 167
BseAI	TCCGGA	1 cut(s)	2012
BseBI	CCWGG	3 cut(s)	1259, 1381, 1890
BseDI	CCNNGG	1 cut(s)	1775
BseGI	GGATG	8 cut(s)	123, 642, 735, 742, 865, 948, 1343, 1951
BseJI	GATNNNNATC	2 cut(s)	117, 167
BseLI	CCNNNNNNNGG	3 cut(s)	1135, 1264, 1824
BseMI	GCAATG	1 cut(s)	883
BseMII	CTCAG	2 cut(s)	171, 330
BseNI	ACTGG	2 cut(s)	349, 771
BseRI	GAGGAG	1 cut(s)	1115
BseXI	GCAGC	4 cut(s)	1000, 1219, 1693, 1897
BseYI	CCCAGC	1 cut(s)	384
BsgI	GTGCAG	4 cut(s)	338, 507, 558, 600
Bsh1236I	CGCG	1 cut(s)	111
BshNI	GGYRCC	1 cut(s)	1576
BsiHKAI	GWGCWC	3 cut(s)	356, 475, 1824
BsiHKCI	CYCGRG	2 cut(s)	1823, 2114
BsiSI	CCGG	2 cut(s)	646, 2013
BslFI	GGGAC	1 cut(s)	1435
BslI	CCNNNNNNNGG	3 cut(s)	1135, 1264, 1824
BsmAI	GTCTC	3 cut(s)	967, 1060, 1381
BsmFI	GGGAC	1 cut(s)	1435
BsmI	GAATGC	3 cut(s)	90, 1069, 1390
BsoBI	CYCGRG	2 cut(s)	1823, 2114
Bsp119I	TTCGAA	1 cut(s)	94
Bsp1286I	GDGCHC	3 cut(s)	356, 475, 1824
Bsp13I	TCCGGA	1 cut(s)	2012
Bsp1407I	TGTACA	2 cut(s)	1228, 1308
Bsp143I	GATC	8 cut(s)	391, 569, 862, 1201, 1322, 1609, 1758, 2035
BspACI	CCGC	2 cut(s)	998, 1751
BspCNI	CTCAG	2 cut(s)	170, 331
BspEI	TCCGGA	1 cut(s)	2012
BspFNI	CGCG	1 cut(s)	111
BspLI	GGNNCC	2 cut(s)	1324, 1578
BspMAI	CTGCAG	1 cut(s)	1209
BspMI	ACCTGC	1 cut(s)	479
BspPI	GGATC	3 cut(s)	577, 1317, 1330
BspQI	GCTCTTC	2 cut(s)	1263, 1557
BspT104I	TTCGAA	1 cut(s)	94
BspT107I	GGYRCC	1 cut(s)	1576
BsrDI	GCAATG	1 cut(s)	883
BsrGI	TGTACA	2 cut(s)	1228, 1308
BsrI	ACTGG	2 cut(s)	349, 771
BssECI	CCNNGG	1 cut(s)	1775
BssMI	GATC	8 cut(s)	391, 569, 862, 1201, 1322, 1609, 1758, 2035
BssSI	CACGAG	2 cut(s)	132, 355
BssT1I	CCWWGG	1 cut(s)	1775
Bst2BI	CACGAG	2 cut(s)	132, 355
Bst2UI	CCWGG	3 cut(s)	1259, 1381, 1890
Bst4CI	ACNGT	3 cut(s)	655, 668, 1849
Bst6I	CTCTTC	4 cut(s)	1098, 1127, 1263, 1557
BstAPI	GCANNNNNTGC	1 cut(s)	113
BstAUI	TGTACA	2 cut(s)	1228, 1308
BstBAI	YACGTR	1 cut(s)	224
BstBI	TTCGAA	1 cut(s)	94
BstC8I	GCNNGC	7 cut(s)	109, 793, 921, 1003, 1217, 1221, 1704
BstDEI	CTNAG	6 cut(s)	157, 339, 476, 537, 1735, 1762
BstEII	GGTNACC	1 cut(s)	38
BstF5I	GGATG	8 cut(s)	123, 642, 735, 742, 865, 948, 1343, 1951
BstFNI	CGCG	1 cut(s)	111
BstHHI	GCGC	1 cut(s)	1505
BstKTI	GATC	8 cut(s)	394, 572, 865, 1204, 1325, 1612, 1761, 2038
BstMAI	GTCTC	3 cut(s)	967, 1060, 1381
BstMBI	GATC	8 cut(s)	391, 569, 862, 1201, 1322, 1609, 1758, 2035
BstMWI	GCNNNNNNNGC	8 cut(s)	113, 479, 533, 707, 998, 1216, 1509, 1864
BstNI	CCWGG	3 cut(s)	1259, 1381, 1890
BstNSI	RCATGY	5 cut(s)	434, 789, 1602, 1813, 1928
BstPI	GGTNACC	1 cut(s)	38
BstSCI	CCNGG	3 cut(s)	1257, 1379, 1888
BstSFI	CTRYAG	1 cut(s)	1205
BstUI	CGCG	1 cut(s)	111
BstV1I	GCAGC	4 cut(s)	1000, 1219, 1693, 1897
BstX2I	RGATCY	3 cut(s)	569, 1322, 1758
BstXI	CCANNNNNNTGG	1 cut(s)	1396
BstYI	RGATCY	3 cut(s)	569, 1322, 1758
Bsu36I	CCTNAGG	1 cut(s)	1735
BtgZI	GCGATG	2 cut(s)	104, 126
BtsCI	GGATG	8 cut(s)	123, 642, 735, 742, 865, 948, 1343, 1951
BtsIMutI	CAGTG	2 cut(s)	356, 778
BveI	ACCTGC	1 cut(s)	479
Cac8I	GCNNGC	7 cut(s)	109, 793, 921, 1003, 1217, 1221, 1704
CfoI	GCGC	1 cut(s)	1505
Cfr13I	GGNCC	3 cut(s)	695, 1588, 1787
CseI	GACGC	1 cut(s)	320
Csp6I	GTAC	9 cut(s)	282, 415, 589, 1081, 1229, 1309, 1577, 1813, 2083
CviQI	GTAC	9 cut(s)	282, 415, 589, 1081, 1229, 1309, 1577, 1813, 2083
DdeI	CTNAG	6 cut(s)	157, 339, 476, 537, 1735, 1762
DpnI	GATC	8 cut(s)	393, 571, 864, 1203, 1324, 1611, 1760, 2037
DpnII	GATC	8 cut(s)	391, 569, 862, 1201, 1322, 1609, 1758, 2035
DraI	TTTAAA	1 cut(s)	1351
Eam1104I	CTCTTC	4 cut(s)	1098, 1127, 1263, 1557
EarI	CTCTTC	4 cut(s)	1098, 1127, 1263, 1557
EciI	GGCGGA	1 cut(s)	1766
Ecl136II	GAGCTC	1 cut(s)	1822
Eco130I	CCWWGG	1 cut(s)	1775
Eco24I	GRGCYC	1 cut(s)	1824
Eco47I	GGWCC	3 cut(s)	695, 1588, 1787
Eco53kI	GAGCTC	1 cut(s)	1822
Eco57I	CTGAAG	2 cut(s)	1151, 1446
Eco81I	CCTNAGG	1 cut(s)	1735
Eco88I	CYCGRG	2 cut(s)	1823, 2114
Eco91I	GGTNACC	1 cut(s)	38
EcoICRI	GAGCTC	1 cut(s)	1822
EcoO65I	GGTNACC	1 cut(s)	38
EcoRI	GAATTC	1 cut(s)	361
EcoRII	CCWGG	3 cut(s)	1257, 1379, 1888
EcoT14I	CCWWGG	1 cut(s)	1775
EcoT22I	ATGCAT	1 cut(s)	92
EcoT38I	GRGCYC	1 cut(s)	1824
ErhI	CCWWGG	1 cut(s)	1775
FalI	AAGNNNNNCTT	2 cut(s)	241, 273
FaqI	GGGAC	1 cut(s)	1435
FbaI	TGATCA	1 cut(s)	2035
Fnu4HI	GCNGC	6 cut(s)	999, 1014, 1208, 1707, 1886, 2109
FokI	GGATG	8 cut(s)	110, 649, 742, 749, 872, 955, 1350, 1938
FriOI	GRGCYC	1 cut(s)	1824
Fsp4HI	GCNGC	6 cut(s)	999, 1014, 1208, 1707, 1886, 2109
FspBI	CTAG	4 cut(s)	9, 713, 1196, 1776
GlaI	GCGC	1 cut(s)	1504
GluI	GCNGC	6 cut(s)	999, 1014, 1208, 1707, 1886, 2109
GsaI	CCCAGC	1 cut(s)	388
HapII	CCGG	2 cut(s)	646, 2013
HgaI	GACGC	1 cut(s)	320
HhaI	GCGC	1 cut(s)	1505
Hin6I	GCGC	1 cut(s)	1503
HinP1I	GCGC	1 cut(s)	1503
HincII	GTYRAC	1 cut(s)	762
HindII	GTYRAC	1 cut(s)	762
HindIII	AAGCTT	2 cut(s)	405, 793
HinfI	GANTC	5 cut(s)	56, 83, 1116, 1139, 1171
HpaI	GTTAAC	1 cut(s)	762
HpaII	CCGG	2 cut(s)	646, 2013
HphI	GGTGA	4 cut(s)	50, 1847, 1948, 2072
Hpy166II	GTNNAC	3 cut(s)	762, 1083, 1231
Hpy188I	TCNGA	3 cut(s)	160, 556, 967
Hpy188III	TCNNGA	7 cut(s)	172, 1129, 1433, 1785, 1825, 2013, 2039
Hpy8I	GTNNAC	3 cut(s)	762, 1083, 1231
HpyAV	CCTTC	3 cut(s)	806, 1526, 1579
HpyCH4III	ACNGT	3 cut(s)	655, 668, 1849
HpyCH4IV	ACGT	1 cut(s)	223
HpyF10VI	GCNNNNNNNGC	8 cut(s)	113, 479, 533, 707, 998, 1216, 1509, 1864
HpyF3I	CTNAG	6 cut(s)	157, 339, 476, 537, 1735, 1762
HpySE526I	ACGT	1 cut(s)	223
HspAI	GCGC	1 cut(s)	1503
Kpn2I	TCCGGA	1 cut(s)	2012
KpnI	GGTACC	1 cut(s)	1580
Ksp22I	TGATCA	1 cut(s)	2035
KspAI	GTTAAC	1 cut(s)	762
Kzo9I	GATC	8 cut(s)	391, 569, 862, 1201, 1322, 1609, 1758, 2035
LguI	GCTCTTC	2 cut(s)	1263, 1557
LmnI	GCTCC	1 cut(s)	1465
Lsp1109I	GCAGC	4 cut(s)	1000, 1219, 1693, 1897
MaeI	CTAG	4 cut(s)	9, 713, 1196, 1776
MaeII	ACGT	1 cut(s)	223
MaeIII	GTNAC	7 cut(s)	38, 545, 641, 845, 1480, 1724, 1843
MalI	GATC	8 cut(s)	393, 571, 864, 1203, 1324, 1611, 1760, 2037
MboI	GATC	8 cut(s)	391, 569, 862, 1201, 1322, 1609, 1758, 2035
MflI	RGATCY	3 cut(s)	569, 1322, 1758
MhlI	GDGCHC	3 cut(s)	356, 475, 1824
MluCI	AATT	6 cut(s)	149, 227, 361, 425, 519, 1291
MlyI	GAGTC	3 cut(s)	50, 1110, 1148
MmeI	TCCRAC	4 cut(s)	1093, 1341, 1880, 2079
Mph1103I	ATGCAT	1 cut(s)	92
MroI	TCCGGA	1 cut(s)	2012
MroXI	GAANNNNTTC	1 cut(s)	257
MseI	TTAA	8 cut(s)	287, 332, 450, 761, 914, 1251, 1350, 1652
MslI	CAYNNNNRTG	4 cut(s)	132, 1394, 1667, 2093
MspI	CCGG	2 cut(s)	646, 2013
MspR9I	CCNGG	3 cut(s)	1259, 1381, 1890
Mva1269I	GAATGC	3 cut(s)	90, 1069, 1390
MvaI	CCWGG	3 cut(s)	1259, 1381, 1890
MvnI	CGCG	1 cut(s)	111
MwoI	GCNNNNNNNGC	8 cut(s)	113, 479, 533, 707, 998, 1216, 1509, 1864
NdeII	GATC	8 cut(s)	391, 569, 862, 1201, 1322, 1609, 1758, 2035
NlaIV	GGNNCC	2 cut(s)	1324, 1578
NmeAIII	GCCGAG	1 cut(s)	1843
NmuCI	GTSAC	4 cut(s)	38, 641, 845, 1480
NsiI	ATGCAT	1 cut(s)	92
NspI	RCATGY	5 cut(s)	434, 789, 1602, 1813, 1928
NspV	TTCGAA	1 cut(s)	94
OliI	CACNNNNGTG	1 cut(s)	132
PciI	ACATGT	2 cut(s)	1598, 1809
PciSI	GCTCTTC	2 cut(s)	1263, 1557
PcsI	WCGNNNNNNNCGW	1 cut(s)	362
PctI	GAATGC	3 cut(s)	90, 1069, 1390
PdmI	GAANNNNTTC	1 cut(s)	257
PfeI	GAWTC	2 cut(s)	83, 1171
PflFI	GACNNNGTC	1 cut(s)	1478
PfoI	TCCNGGA	1 cut(s)	1379
PkrI	GCNGC	6 cut(s)	1000, 1015, 1209, 1708, 1887, 2110
PleI	GAGTC	3 cut(s)	50, 1110, 1147
PpsI	GAGTC	3 cut(s)	50, 1110, 1147
Ppu21I	YACGTR	1 cut(s)	224
PscI	ACATGT	2 cut(s)	1598, 1809
Psp124BI	GAGCTC	1 cut(s)	1824
Psp6I	CCWGG	3 cut(s)	1257, 1379, 1888
PspEI	GGTNACC	1 cut(s)	38
PspFI	CCCAGC	1 cut(s)	384
PspGI	CCWGG	3 cut(s)	1257, 1379, 1888
PspN4I	GGNNCC	2 cut(s)	1324, 1578
PspPI	GGNCC	3 cut(s)	695, 1588, 1787
PstI	CTGCAG	1 cut(s)	1209
PsuI	RGATCY	3 cut(s)	569, 1322, 1758
PsyI	GACNNNGTC	1 cut(s)	1478
RsaI	GTAC	9 cut(s)	283, 416, 590, 1082, 1230, 1310, 1578, 1814, 2084
RsaNI	GTAC	9 cut(s)	282, 415, 589, 1081, 1229, 1309, 1577, 1813, 2083
RseI	CAYNNNNRTG	4 cut(s)	132, 1394, 1667, 2093
SacI	GAGCTC	1 cut(s)	1824
SapI	GCTCTTC	2 cut(s)	1263, 1557
SaqAI	TTAA	8 cut(s)	287, 332, 450, 761, 914, 1251, 1350, 1652
SatI	GCNGC	6 cut(s)	999, 1014, 1208, 1707, 1886, 2109
Sau3AI	GATC	8 cut(s)	391, 569, 862, 1201, 1322, 1609, 1758, 2035
Sau96I	GGNCC	3 cut(s)	695, 1588, 1787
ScaI	AGTACT	1 cut(s)	416
SchI	GAGTC	3 cut(s)	50, 1110, 1148
ScrFI	CCNGG	3 cut(s)	1259, 1381, 1890
SduI	GDGCHC	3 cut(s)	356, 475, 1824
SfcI	CTRYAG	1 cut(s)	1205
SfuI	TTCGAA	1 cut(s)	94
SinI	GGWCC	3 cut(s)	695, 1588, 1787
SmiMI	CAYNNNNRTG	4 cut(s)	132, 1394, 1667, 2093
Sse9I	AATT	6 cut(s)	149, 227, 361, 425, 519, 1291
SsiI	CCGC	2 cut(s)	998, 1751
SspI	AATATT	2 cut(s)	1440, 1544
SspMI	CTAG	4 cut(s)	9, 713, 1196, 1776
SstI	GAGCTC	1 cut(s)	1824
StyD4I	CCNGG	3 cut(s)	1257, 1379, 1888
StyI	CCWWGG	1 cut(s)	1775
TaaI	ACNGT	3 cut(s)	655, 668, 1849
TaiI	ACGT	1 cut(s)	226
TaqI	TCGA	6 cut(s)	54, 94, 365, 1434, 1621, 2022
TasI	AATT	6 cut(s)	149, 227, 361, 425, 519, 1291
TatI	WGTACW	5 cut(s)	281, 414, 588, 1228, 1308
TauI	GCSGC	1 cut(s)	1001
TfiI	GAWTC	2 cut(s)	83, 1171
Tru1I	TTAA	8 cut(s)	287, 332, 450, 761, 914, 1251, 1350, 1652
Tru9I	TTAA	8 cut(s)	287, 332, 450, 761, 914, 1251, 1350, 1652
TscAI	CASTG	2 cut(s)	356, 778
TseFI	GTSAC	4 cut(s)	38, 641, 845, 1480
TseI	GCWGC	5 cut(s)	1013, 1207, 1706, 1885, 2108
Tsp45I	GTSAC	4 cut(s)	38, 641, 845, 1480
TspGWI	ACGGA	1 cut(s)	1260
TspRI	CASTG	2 cut(s)	356, 778
Tth111I	GACNNNGTC	1 cut(s)	1478
VpaK11BI	GGWCC	3 cut(s)	695, 1588, 1787
XapI	RAATTY	3 cut(s)	361, 519, 1291
XceI	RCATGY	5 cut(s)	434, 789, 1602, 1813, 1928
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1163, 1896
XmaJI	CCTAGG	1 cut(s)	1775
XmnI	GAANNNNTTC	1 cut(s)	257
XspI	CTAG	4 cut(s)	9, 713, 1196, 1776
ZrmI	AGTACT	1 cut(s)	416
Zsp2I	ATGCAT	1 cut(s)	92

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.