Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0008675

Physical Location & Seq

Genomic Coordinates Forward (+)

35085228 .. 35087898

Gene Structure 2671 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G027230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGGTGGGATTTAGACAAGGATTGCTCAAGCAAATTGTGGGTGACCTTGCTTTCGTCGACTCCTCACCCTTCGGGAAGCTTTTGGACTCCTGCATTCGTACCAAGTCGGCGCGTGATGCCCGTCGCGTCCACGCCCGCGTCATCAAAACCCAGTTTTCTTCAGAGGTTTTCATCCAGAACAGGCTCATCGACGCGTATGGGAAATGTGGTTCATTCGATGATGCACGTAAGGTGTTTGATAAAATGCCTGAGAGGAACACTTTCAGTTGGAACTGCATCATTACCGCATTTATGAAGTTGGGTTTTGTTGATGAGGCTTTGCAGAGTTTTAGGTCGATGCCGGAGCCCGACCAGTGCTCATGGAACTCGATGGTTTCGGGGTTTGCACAGCATGGTCGCTTTGAACAAGCTTTGGAATATTTTGTTAACATGCATGGGGATGATTTTGTTCTGAATGAATACACGTTCGGTAGCGCTCTTAGTGCTTGTGCGGGCTTAAGAGAGCTGAAAATGGGTGTCCAAATTCATGGTTTCATCGCGAAATCTTGTTACTCTTCATATGTTTATATGGGGTCTGCACTTATTGATATGTACTCGAAATGTGGGAATGTTGCTTTTGCACAAAGGGTATTTGATTGCATGAGTGTGCGAAATGTTGTTTCTTGGAACAGTTTGATTACTTGTTATGAGCAAAATGGTCCTGCAAGCGAAGCCGTACAAGTGTTTGTGAGGATGATGGATTGTGGGTTCAAACCGGACGAGTTGACTTTAGCCAGTATGGTAAGTGCTTGTGCGAGCTTGTCTGCAGTGAAAGAAGGTCAGCAAATACATGCTTGCGTTATGAAATGTGATAAATACAGGAACGATGTTGTATTGGGAAATGCATTAGTTGATATGTATGCAAAATGCAACAGAATAAATGAGGCCAGAAGGGTTTTCGATGGGATGTCTATCAGAAATGTGGTCTCAGAAACTTCCATGGTAAGTGGATATGCAAAGGCGGCAAGTGTAGAAGTTGCAAGGTCGTTGTTTACAAAGATGATGGAGAGGAATGTAGTCTCTTGGAATGCACTCATTGCAGGGTACACACAGAATGGAGAGAATGAAGAGGCCCTTGGACTCTTTCTCCTCTTGAAAAGAGAGTCTGTTTGGCCCACCCACTACACATTTGCAAATCTACTCAATGCTTGTGCAAGTCTTGTTGATCTGCAGCTTGGCAAGCAAGCTCATTCACACATATTGAAGCATGGTTTCCAATTCCAGGTTGGTGAAGAGCCTGATATATTTGTTGGAAATTCTCTAATAGATATGTACATGAAATGTGGGTCTATTGAAGATGGCTGTCAGGTGTTTAGAAATATGTTGGAAAGGGATCATGTCTCATGGAATGCTATAATTGTGGGACATGCGCAAAATGGTTATGGGACTGAAGCTCTTGAAATATTTAGAAAAATGCTGGTATCAGGGGAGCAACCAGACCATGTTACTATGATTGGTGTTCTATGTGCTTGTAGCCACGCAGGATTGGTTGAAGAGGGGAGAAATATTTTTTACACAATGAATGAAGAGCACGGGGTGGTACCATTGAAGGACCATTATACATGTATGGTTGATCTACTTGGTCGAGCGGGTTGCCTTGACGAAGCTAAGAATTTAATAGAGGTCATGCCAATGCAACCCGATGCCGTTATATGGGGTTCTTTGCTTGCTGCTTGTAAAGTTCATCGTAACATTAACTTGGGGAAATATGTGGCGGAGAAGCTGTTAGCTATTGAACCTAGGAATTCTGGACCTTATGTTCTTCTCTCAAACATGTATGCTGAGCTTGGGAGATGGAGTGATGTTGTAAGAGTAAGGAAGCTGATGAGGCAACGGGGGGTTGTCAAGCAGCCGGGTTGCAGTTGGATTGAAATACAGGGTCATCTGAATGTTTTCCTGGTGAAAGATAAAAGGCATTGTCAAAAGAATGAAATCTATTGTCTTTTGAATTTGCTCACAGAACAAATGAAGCGACATGGATATGTACAAGATGCTGGTGACTACGAGTCTTATGAAGAGCAAGCTGAATCTCAACTAACTTCATTTTTCGAAATGGATATGTCAGAAGATGTAGCTATTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009451 GO:0009743 GO:0009756 GO:0009987 GO:0010033 GO:0010182 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0023052 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

707

Amino Acids

79.45

Weight (kDa)

6.05

Isoelectric Point (pI)

47.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	116 - 164	2.1e-07	PPR repeat family
PPR	PF01535	120 - 147	4.8e-06	PPR repeat
PPR_2	PF13041	217 - 265	1.3e-09	PPR repeat family
PPR	PF01535	220 - 250	2.8e-06	PPR repeat
PPR_2	PF13041	350 - 398	1.6e-10	PPR repeat family
PPR	PF01535	353 - 382	7e-06	PPR repeat
PPR_2	PF13041	458 - 505	1.3e-07	PPR repeat family
PPR	PF01535	460 - 489	5.4e-06	PPR repeat
E_motif	PF20431	575 - 637	1.8e-22	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008675)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13600
fragaria_vesca	FvH4_7g02360 FvH4_7g02360
malus_domestica	MD02G1294800.v1.1 MD07G1031100.v1.1 MD07G1032100.v1.1
prunus_persica	Prupe.7G009700_v2.0.a1
pyrus_communis	pycom07g02270
rosa_chinensis	RchiOBHm_Chr1g0319691 RchiOBHm_Chr7g0218591
rosa_laevigata	RLG00000002327 RLG00000030463
rosa_multiflora	Rmu_sc0001301.1_g000024
rosa_roxburghii	Rroxscaffold_3G00240770
rosa_rugosa	Rorug01G0029400 Rorug07G0178600
rosa_samantha	Rh1BG038400 Rh7AG319700 Rh7BG311700 Rh7CG336600 Rh7DG318700
rosa_wichuraiana	Rw0G015750 Rw7G027230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1410
Acc65I	GGTACC	1 cut(s)	1579
AccB1I	GGYRCC	1 cut(s)	1579
AccBSI	CCGCTC	1 cut(s)	1628
AccI	GTMKAC	1 cut(s)	57
AccII	CGCG	5 cut(s)	112, 126, 138, 194, 539
AciI	CCGC	6 cut(s)	136, 285, 491, 1001, 1628, 1754
AclWI	GGATC	1 cut(s)	1380
AcsI	RAATTY	5 cut(s)	522, 1294, 1651, 1783, 1987
AcuI	CTGAAG	2 cut(s)	144, 1449
AdeI	CACNNNGTG	1 cut(s)	1576
AfaI	GTAC	7 cut(s)	100, 593, 717, 1085, 1313, 1581, 2025
AfeI	AGCGCT	1 cut(s)	475
AfiI	CCNNNNNNNGG	2 cut(s)	1261, 1692
AflII	CTTAAG	1 cut(s)	496
AflIII	ACRYGT	4 cut(s)	192, 462, 1601, 1812
AhdI	GACNNNNNGTC	1 cut(s)	2044
AjnI	CCWGG	2 cut(s)	1260, 1935
AjuI	GAANNNNNNNTTGG	2 cut(s)	1098, 1130
AloI	GAACNNNNNNTCC	6 cut(s)	193, 225, 731, 763, 1782, 1814
Alw21I	GWGCWC	2 cut(s)	359, 1572
Alw26I	GTCTC	3 cut(s)	970, 1063, 1384
AlwI	GGATC	1 cut(s)	1380
Aor51HI	AGCGCT	1 cut(s)	475
AoxI	GGCC	3 cut(s)	924, 1110, 1151
ApeKI	GCWGC	3 cut(s)	1210, 1709, 1888
ApoI	RAATTY	5 cut(s)	522, 1294, 1651, 1783, 1987
ArsI	GACNNNNNNTTYG	2 cut(s)	35, 67
Asp700I	GAANNNNTTC	2 cut(s)	260, 1931
Asp718I	GGTACC	1 cut(s)	1579
AspA2I	CCTAGG	1 cut(s)	1778
AspLEI	GCGC	3 cut(s)	112, 476, 1411
AspS9I	GGNCC	5 cut(s)	698, 1111, 1152, 1591, 1790
AsuC2I	CCSGG	1 cut(s)	1893
AsuHPI	GGTGA	5 cut(s)	53, 57, 1280, 1951, 2048
AsuII	TTCGAA	1 cut(s)	2088
AvaII	GGWCC	3 cut(s)	698, 1591, 1790
AvrII	CCTAGG	1 cut(s)	1778
BanI	GGYRCC	1 cut(s)	1579
BanII	GRGCYC	1 cut(s)	348
Bbv12I	GWGCWC	2 cut(s)	359, 1572
BbvI	GCAGC	3 cut(s)	1222, 1696, 1900
BccI	CCATC	6 cut(s)	364, 730, 935, 1036, 1331, 1827
BceAI	ACGGC	2 cut(s)	698, 1670
BcgI	CGANNNNNNTGC	2 cut(s)	1614, 1648
BciT130I	CCWGG	2 cut(s)	1262, 1937
BcnI	CCSGG	1 cut(s)	1893
BcoDI	GTCTC	3 cut(s)	970, 1063, 1384
BfaI	CTAG	1 cut(s)	1779
BfmI	CTRYAG	2 cut(s)	804, 1208
BfoI	RGCGCY	1 cut(s)	477
BfrI	CTTAAG	1 cut(s)	496
BisI	GCNGC	4 cut(s)	1002, 1211, 1710, 1889
BlnI	CCTAGG	1 cut(s)	1778
BlpI	GCTNAGC	1 cut(s)	1821
BlsI	GCNGC	4 cut(s)	1003, 1212, 1711, 1890
Bme1390I	CCNGG	3 cut(s)	1262, 1893, 1937
Bme18I	GGWCC	3 cut(s)	698, 1591, 1790
BmeRI	GACNNNNNGTC	1 cut(s)	2044
BmgT120I	GGNCC	5 cut(s)	698, 1111, 1152, 1591, 1790
BmiI	GGNNCC	2 cut(s)	345, 1581
BmrFI	CCNGG	3 cut(s)	1262, 1893, 1937
BmrI	ACTGGG	1 cut(s)	145
BmsI	GCATC	6 cut(s)	106, 211, 285, 327, 1672, 2020
BmuI	ACTGGG	1 cut(s)	145
Bpu1102I	GCTNAGC	1 cut(s)	1821
Bpu14I	TTCGAA	1 cut(s)	2088
BpuEI	CTTGAG	1 cut(s)	11
BpuMI	CCSGG	1 cut(s)	1893
BsaAI	YACGTR	1 cut(s)	227
BsaBI	GATNNNNATC	1 cut(s)	950
BsaI	GGTCTC	1 cut(s)	970
BsaJI	CCNNGG	3 cut(s)	978, 1114, 1778
BsaWI	WCCGGW	1 cut(s)	754
BsaXI	ACNNNNNCTCC	6 cut(s)	1110, 1140, 1748, 1778, 1822, 1852
Bsc4I	CCNNNNNNNGG	2 cut(s)	1261, 1692
Bse1I	ACTGG	3 cut(s)	151, 352, 774
Bse3DI	GCAATG	1 cut(s)	1074
Bse8I	GATNNNNATC	1 cut(s)	950
BseBI	CCWGG	2 cut(s)	1262, 1937
BseDI	CCNNGG	3 cut(s)	978, 1114, 1778
BseGI	GGATG	4 cut(s)	171, 445, 738, 951
BseJI	GATNNNNATC	1 cut(s)	950
BseLI	CCNNNNNNNGG	2 cut(s)	1261, 1692
BseMI	GCAATG	1 cut(s)	1074
BseMII	CTCAG	3 cut(s)	240, 981, 1812
BseNI	ACTGG	3 cut(s)	151, 352, 774
BseRI	GAGGAG	2 cut(s)	52, 1118
BseXI	GCAGC	3 cut(s)	1222, 1696, 1900
BsgI	GTGCAG	1 cut(s)	561
Bsh1236I	CGCG	5 cut(s)	112, 126, 138, 194, 539
BshFI	GGCC	3 cut(s)	926, 1112, 1153
BshNI	GGYRCC	1 cut(s)	1579
BsiHKAI	GWGCWC	2 cut(s)	359, 1572
BsiSI	CCGG	3 cut(s)	341, 755, 1892
BslFI	GGGAC	2 cut(s)	1416, 1438
BslI	CCNNNNNNNGG	2 cut(s)	1261, 1692
BsmAI	GTCTC	3 cut(s)	970, 1063, 1384
BsmFI	GGGAC	2 cut(s)	1416, 1438
BsmI	GAATGC	3 cut(s)	93, 1072, 1393
BsnI	GGCC	3 cut(s)	926, 1112, 1153
Bso31I	GGTCTC	1 cut(s)	970
Bsp119I	TTCGAA	1 cut(s)	2088
Bsp1286I	GDGCHC	3 cut(s)	348, 359, 1572
Bsp1407I	TGTACA	2 cut(s)	1311, 2023
Bsp143I	GATC	3 cut(s)	1204, 1372, 1612
Bsp1720I	GCTNAGC	1 cut(s)	1821
Bsp19I	CCATGG	1 cut(s)	978
Bsp68I	TCGCGA	1 cut(s)	539
BspACI	CCGC	6 cut(s)	136, 285, 491, 1001, 1628, 1754
BspANI	GGCC	3 cut(s)	926, 1112, 1153
BspCNI	CTCAG	3 cut(s)	241, 980, 1813
BspFNI	CGCG	5 cut(s)	112, 126, 138, 194, 539
BspLI	GGNNCC	2 cut(s)	345, 1581
BspMAI	CTGCAG	2 cut(s)	808, 1212
BspPI	GGATC	1 cut(s)	1380
BspQI	GCTCTTC	3 cut(s)	1266, 1560, 2049
BspT104I	TTCGAA	1 cut(s)	2088
BspT107I	GGYRCC	1 cut(s)	1579
BspTI	CTTAAG	1 cut(s)	496
BspTNI	GGTCTC	1 cut(s)	970
BsrBI	CCGCTC	1 cut(s)	1628
BsrDI	GCAATG	1 cut(s)	1074
BsrGI	TGTACA	2 cut(s)	1311, 2023
BsrI	ACTGG	3 cut(s)	151, 352, 774
BssECI	CCNNGG	3 cut(s)	978, 1114, 1778
BssMI	GATC	3 cut(s)	1204, 1372, 1612
BssT1I	CCWWGG	3 cut(s)	978, 1114, 1778
Bst2UI	CCWGG	2 cut(s)	1262, 1937
Bst4CI	ACNGT	1 cut(s)	671
Bst6I	CTCTTC	6 cut(s)	559, 1101, 1266, 1527, 1560, 2049
BstAFI	CTTAAG	1 cut(s)	496
BstAPI	GCANNNNNTGC	1 cut(s)	1076
BstAUI	TGTACA	2 cut(s)	1311, 2023
BstBAI	YACGTR	1 cut(s)	227
BstBI	TTCGAA	1 cut(s)	2088
BstC8I	GCNNGC	9 cut(s)	136, 493, 706, 796, 835, 1220, 1224, 1707, 2061
BstDEI	CTNAG	5 cut(s)	249, 479, 967, 1647, 1821
BstDSI	CCRYGG	1 cut(s)	978
BstEII	GGTNACC	1 cut(s)	41
BstF5I	GGATG	4 cut(s)	171, 445, 738, 951
BstFNI	CGCG	5 cut(s)	112, 126, 138, 194, 539
BstH2I	RGCGCY	1 cut(s)	477
BstHHI	GCGC	3 cut(s)	112, 476, 1411
BstKTI	GATC	3 cut(s)	1207, 1375, 1615
BstMAI	GTCTC	3 cut(s)	970, 1063, 1384
BstMBI	GATC	3 cut(s)	1204, 1372, 1612
BstMWI	GCNNNNNNNGC	7 cut(s)	116, 482, 710, 1001, 1076, 1219, 1867
BstNI	CCWGG	2 cut(s)	1262, 1937
BstNSI	RCATGY	5 cut(s)	433, 833, 1409, 1605, 1816
BstPI	GGTNACC	1 cut(s)	41
BstSCI	CCNGG	3 cut(s)	1260, 1891, 1935
BstSFI	CTRYAG	2 cut(s)	804, 1208
BstUI	CGCG	5 cut(s)	112, 126, 138, 194, 539
BstV1I	GCAGC	3 cut(s)	1222, 1696, 1900
BstXI	CCANNNNNNTGG	1 cut(s)	527
BsuRI	GGCC	3 cut(s)	926, 1112, 1153
BtgI	CCRYGG	1 cut(s)	978
BtgZI	GCGATG	1 cut(s)	520
BtsCI	GGATG	4 cut(s)	171, 445, 738, 951
BtsI	GCAGTG	1 cut(s)	813
BtsIMutI	CAGTG	2 cut(s)	359, 813
BtuMI	TCGCGA	1 cut(s)	539
Cac8I	GCNNGC	9 cut(s)	136, 493, 706, 796, 835, 1220, 1224, 1707, 2061
CfoI	GCGC	3 cut(s)	112, 476, 1411
Cfr13I	GGNCC	5 cut(s)	698, 1111, 1152, 1591, 1790
CseI	GACGC	3 cut(s)	115, 127, 200
Csp6I	GTAC	7 cut(s)	99, 592, 716, 1084, 1312, 1580, 2024
CviQI	GTAC	7 cut(s)	99, 592, 716, 1084, 1312, 1580, 2024
DdeI	CTNAG	5 cut(s)	249, 479, 967, 1647, 1821
DpnI	GATC	3 cut(s)	1206, 1374, 1614
DpnII	GATC	3 cut(s)	1204, 1372, 1612
DraIII	CACNNNGTG	1 cut(s)	1576
DriI	GACNNNNNGTC	1 cut(s)	2044
Eam1104I	CTCTTC	6 cut(s)	559, 1101, 1266, 1527, 1560, 2049
Eam1105I	GACNNNNNGTC	1 cut(s)	2044
EarI	CTCTTC	6 cut(s)	559, 1101, 1266, 1527, 1560, 2049
EciI	GGCGGA	1 cut(s)	1769
Eco130I	CCWWGG	3 cut(s)	978, 1114, 1778
Eco24I	GRGCYC	1 cut(s)	348
Eco31I	GGTCTC	1 cut(s)	970
Eco47I	GGWCC	3 cut(s)	698, 1591, 1790
Eco47III	AGCGCT	1 cut(s)	475
Eco57I	CTGAAG	2 cut(s)	144, 1449
Eco91I	GGTNACC	1 cut(s)	41
EcoO109I	RGGNCCY	1 cut(s)	1111
EcoO65I	GGTNACC	1 cut(s)	41
EcoRI	GAATTC	1 cut(s)	1783
EcoRII	CCWGG	2 cut(s)	1260, 1935
EcoT14I	CCWWGG	3 cut(s)	978, 1114, 1778
EcoT22I	ATGCAT	2 cut(s)	435, 886
EcoT38I	GRGCYC	1 cut(s)	348
ErhI	CCWWGG	3 cut(s)	978, 1114, 1778
FalI	AAGNNNNNCTT	2 cut(s)	1098, 1130
FaqI	GGGAC	2 cut(s)	1416, 1438
FauI	CCCGC	3 cut(s)	143, 484, 1621
FauNDI	CATATG	1 cut(s)	559
FblI	GTMKAC	1 cut(s)	57
Fnu4HI	GCNGC	4 cut(s)	1002, 1211, 1710, 1889
FokI	GGATG	4 cut(s)	158, 452, 745, 958
FriOI	GRGCYC	1 cut(s)	348
Fsp4HI	GCNGC	4 cut(s)	1002, 1211, 1710, 1889
FspBI	CTAG	1 cut(s)	1779
FspI	TGCGCA	1 cut(s)	1410
GlaI	GCGC	3 cut(s)	111, 475, 1410
GluI	GCNGC	4 cut(s)	1002, 1211, 1710, 1889
HaeII	RGCGCY	1 cut(s)	477
HaeIII	GGCC	3 cut(s)	926, 1112, 1153
HapII	CCGG	3 cut(s)	341, 755, 1892
HgaI	GACGC	3 cut(s)	115, 127, 200
HhaI	GCGC	3 cut(s)	112, 476, 1411
Hin6I	GCGC	3 cut(s)	110, 474, 1409
HinP1I	GCGC	3 cut(s)	110, 474, 1409
HincII	GTYRAC	3 cut(s)	58, 427, 765
HindII	GTYRAC	3 cut(s)	58, 427, 765
HindIII	AAGCTT	2 cut(s)	77, 408
HinfI	GANTC	6 cut(s)	59, 86, 1119, 1142, 2045, 2066
HpaI	GTTAAC	1 cut(s)	427
HpaII	CCGG	3 cut(s)	341, 755, 1892
HphI	GGTGA	5 cut(s)	53, 57, 1280, 1951, 2048
Hpy166II	GTNNAC	6 cut(s)	58, 130, 427, 765, 1032, 1086
Hpy188I	TCNGA	6 cut(s)	163, 453, 956, 970, 1926, 2104
Hpy188III	TCNNGA	6 cut(s)	73, 175, 538, 1132, 1436, 1788
Hpy8I	GTNNAC	6 cut(s)	58, 130, 427, 765, 1032, 1086
Hpy99I	CGWCG	3 cut(s)	59, 126, 194
HpyAV	CCTTC	4 cut(s)	79, 809, 924, 1582
HpyCH4III	ACNGT	1 cut(s)	671
HpyCH4IV	ACGT	2 cut(s)	226, 464
HpyF10VI	GCNNNNNNNGC	7 cut(s)	116, 482, 710, 1001, 1076, 1219, 1867
HpyF3I	CTNAG	5 cut(s)	249, 479, 967, 1647, 1821
HpySE526I	ACGT	2 cut(s)	226, 464
HspAI	GCGC	3 cut(s)	110, 474, 1409
KpnI	GGTACC	1 cut(s)	1583
KspAI	GTTAAC	1 cut(s)	427
Kzo9I	GATC	3 cut(s)	1204, 1372, 1612
LguI	GCTCTTC	3 cut(s)	1266, 1560, 2049
LmnI	GCTCC	2 cut(s)	343, 1468
Lsp1109I	GCAGC	3 cut(s)	1222, 1696, 1900
LweI	GCATC	6 cut(s)	106, 211, 285, 327, 1672, 2020
MaeI	CTAG	1 cut(s)	1779
MaeII	ACGT	2 cut(s)	226, 464
MaeIII	GTNAC	5 cut(s)	41, 548, 1483, 1727, 2036
MalI	GATC	3 cut(s)	1206, 1374, 1614
MbiI	CCGCTC	1 cut(s)	1628
MboI	GATC	3 cut(s)	1204, 1372, 1612
MhlI	GDGCHC	3 cut(s)	348, 359, 1572
MluCI	AATT	8 cut(s)	33, 522, 1256, 1294, 1395, 1651, 1783, 1987
MluI	ACGCGT	1 cut(s)	192
MlyI	GAGTC	5 cut(s)	53, 80, 1113, 1151, 2054
MmeI	TCCRAC	4 cut(s)	248, 1270, 1344, 1883
Mph1103I	ATGCAT	2 cut(s)	435, 886
MroXI	GAANNNNTTC	2 cut(s)	260, 1931
MseI	TTAA	4 cut(s)	426, 497, 1655, 1734
MslI	CAYNNNNRTG	5 cut(s)	438, 644, 1670, 1926, 2019
MspCI	CTTAAG	1 cut(s)	496
MspI	CCGG	3 cut(s)	341, 755, 1892
MspR9I	CCNGG	3 cut(s)	1262, 1893, 1937
Mva1269I	GAATGC	3 cut(s)	93, 1072, 1393
MvaI	CCWGG	2 cut(s)	1262, 1937
MvnI	CGCG	5 cut(s)	112, 126, 138, 194, 539
MwoI	GCNNNNNNNGC	7 cut(s)	116, 482, 710, 1001, 1076, 1219, 1867
NciI	CCSGG	1 cut(s)	1893
NcoI	CCATGG	1 cut(s)	978
NdeI	CATATG	1 cut(s)	559
NdeII	GATC	3 cut(s)	1204, 1372, 1612
NlaIV	GGNNCC	2 cut(s)	345, 1581
NmuCI	GTSAC	2 cut(s)	41, 2036
NruI	TCGCGA	1 cut(s)	539
NsbI	TGCGCA	1 cut(s)	1410
NsiI	ATGCAT	2 cut(s)	435, 886
NspI	RCATGY	5 cut(s)	433, 833, 1409, 1605, 1816
NspV	TTCGAA	1 cut(s)	2088
PciI	ACATGT	2 cut(s)	1601, 1812
PciSI	GCTCTTC	3 cut(s)	1266, 1560, 2049
PctI	GAATGC	3 cut(s)	93, 1072, 1393
PdmI	GAANNNNTTC	2 cut(s)	260, 1931
PfeI	GAWTC	1 cut(s)	2066
PkrI	GCNGC	4 cut(s)	1003, 1212, 1711, 1890
PleI	GAGTC	5 cut(s)	53, 80, 1113, 1150, 2053
PpsI	GAGTC	5 cut(s)	53, 80, 1113, 1150, 2053
Ppu21I	YACGTR	1 cut(s)	227
PscI	ACATGT	2 cut(s)	1601, 1812
Psp6I	CCWGG	2 cut(s)	1260, 1935
PspEI	GGTNACC	1 cut(s)	41
PspGI	CCWGG	2 cut(s)	1260, 1935
PspN4I	GGNNCC	2 cut(s)	345, 1581
PspPI	GGNCC	5 cut(s)	698, 1111, 1152, 1591, 1790
PstI	CTGCAG	2 cut(s)	808, 1212
RruI	TCGCGA	1 cut(s)	539
RsaI	GTAC	7 cut(s)	100, 593, 717, 1085, 1313, 1581, 2025
RsaNI	GTAC	7 cut(s)	99, 592, 716, 1084, 1312, 1580, 2024
RseI	CAYNNNNRTG	5 cut(s)	438, 644, 1670, 1926, 2019
SalI	GTCGAC	1 cut(s)	56
SapI	GCTCTTC	3 cut(s)	1266, 1560, 2049
SaqAI	TTAA	4 cut(s)	426, 497, 1655, 1734
SatI	GCNGC	4 cut(s)	1002, 1211, 1710, 1889
Sau3AI	GATC	3 cut(s)	1204, 1372, 1612
Sau96I	GGNCC	5 cut(s)	698, 1111, 1152, 1591, 1790
SchI	GAGTC	5 cut(s)	53, 80, 1113, 1151, 2054
ScrFI	CCNGG	3 cut(s)	1262, 1893, 1937
SduI	GDGCHC	3 cut(s)	348, 359, 1572
SfaNI	GCATC	6 cut(s)	106, 211, 285, 327, 1672, 2020
SfcI	CTRYAG	2 cut(s)	804, 1208
SfuI	TTCGAA	1 cut(s)	2088
SinI	GGWCC	3 cut(s)	698, 1591, 1790
SmiMI	CAYNNNNRTG	5 cut(s)	438, 644, 1670, 1926, 2019
SmlI	CTYRAG	2 cut(s)	26, 496
SmoI	CTYRAG	2 cut(s)	26, 496
Sse9I	AATT	8 cut(s)	33, 522, 1256, 1294, 1395, 1651, 1783, 1987
SsiI	CCGC	6 cut(s)	136, 285, 491, 1001, 1628, 1754
SspI	AATATT	3 cut(s)	419, 1443, 1546
SspMI	CTAG	1 cut(s)	1779
StyD4I	CCNGG	3 cut(s)	1260, 1891, 1935
StyI	CCWWGG	3 cut(s)	978, 1114, 1778
TaaI	ACNGT	1 cut(s)	671
TaiI	ACGT	2 cut(s)	229, 467
TaqI	TCGA	9 cut(s)	57, 189, 216, 335, 368, 596, 939, 1624, 2088
TasI	AATT	8 cut(s)	33, 522, 1256, 1294, 1395, 1651, 1783, 1987
TatI	WGTACW	3 cut(s)	591, 1311, 2023
TauI	GCSGC	1 cut(s)	1004
TfiI	GAWTC	1 cut(s)	2066
Tru1I	TTAA	4 cut(s)	426, 497, 1655, 1734
Tru9I	TTAA	4 cut(s)	426, 497, 1655, 1734
TscAI	CASTG	2 cut(s)	359, 813
TseFI	GTSAC	2 cut(s)	41, 2036
TseI	GCWGC	3 cut(s)	1210, 1709, 1888
Tsp45I	GTSAC	2 cut(s)	41, 2036
TspRI	CASTG	2 cut(s)	359, 813
Vha464I	CTTAAG	1 cut(s)	496
VpaK11BI	GGWCC	3 cut(s)	698, 1591, 1790
XapI	RAATTY	5 cut(s)	522, 1294, 1651, 1783, 1987
XceI	RCATGY	5 cut(s)	433, 833, 1409, 1605, 1816
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1262
XmaJI	CCTAGG	1 cut(s)	1778
XmiI	GTMKAC	1 cut(s)	57
XmnI	GAANNNNTTC	2 cut(s)	260, 1931
XspI	CTAG	1 cut(s)	1779
Zsp2I	ATGCAT	2 cut(s)	435, 886

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.