Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0008675

Physical Location & Seq

Genomic Coordinates Forward (+)

1826437 .. 1828557

Gene Structure 2121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g02270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGGGAACTAGACATGGATTGTTCAAACAATTTGTGGGTGACCTCTCTTTCCTCGACTCCACACCCTTTGGGAAGCTATTGGACTCATGCATCCGAACCAAGTCGGCACGTGATGCACGTCGCATCCATGCCCGTATCATCAAGACCCAATTTTCCTCGGAGATTTTTATCCAGAATAGGCTCATTGATGCTTATGGAAAATGTGGTTGCTTGGATGATGCACGCAAACTGTTTGATAAAATGCCTGAAAGGAACACTTTCACTTGGAACTCCATTTTAAGCACATTAATGAAGTGGGGTTTAATTGATGAGGCTGTGAAGATTTTTAGGTTAATGCCTGAGCCTGACCAGTGCTCATGGAATTCGATGGTATCAGGGTTTGCCCAGCATGACCACTTTGAAGAATCTTTGGAATATTTTGTTAGATTGCATGGGGAGAATTTTGTGCCAAATGAATACTCATTTGGTAGTGCTCTTAGTGCTTGTGCAGGTTTAAGAGAGTTGAAAATGGGTGTTCAAATTCATGCTGTAATTGCAAAATCCTCGTACTCATCAGATGTTTATATGGGGTCTGCACTTATTGATATGTACTCTAAATGTGGGAGTGTTTCTTGTGCACAAAGAGTTTTTGATGGGATGAATGACCGGAATACTGTTTCTTGGAACAGTTTGATTACTTGTTATGAGCAGAATGGCCCAGCAAGCGAAGCCTTGGAAGTTTTTGTGAAGATGATGGAGTGTGGGTTCAAACTGGATGAACTAACTTTAGCCAGTGTGGTAAGTGCATGCGCAAGCTTGTCCGCAATAATGGAAGGTCAGCAAATACACGCTTGTGTTGTAAAATGTGATAAATACAGGGATGATCTTGTTCTGTGCAATGCATTAGTTGATATGTATGCAAAATGCAAAAGAGTAAAAGAAGCCAGGTGGATTTTTGATGGGATGCCTGTTAGAAATGTTGTTTCAGAAACTTCCATGGTAAGTGGATATGCAAAATCGGCAAGCGTAAAAGCAGCAAGATTGATGTTTACAAGGATGATGGAAAGAAATATAGTCTCTTGGAACGCACTTATTGCAGGGTACACGCAGAATGGGGAAAATGAAGAGGCCCTTGGACTCTTTCTCCTCCTGAAGAGGGAGTCTGTTCTGCCAACCCACTATACATTTGGGAATCTACTCAATGCTTGTGCAAGTCTTGTTGATCTGCAGCTTGGCAGGCAGGCTCATGTACATGTATTGAAGCACGGATTTCAATTCCAGGTCGGGGAAGAGCCTGATATTTTTGTCGGGAATTCTCTAATAGATATGTATATGAAATGTGGATCTATTGAAGATGGCCGTCGTGTTTTTAAAAATATGTTGCAAAGGGATTATGTATCCTGGAATGCCATGATTGTGGGGTATGCACAAAATGGTTACGGGATTGAAGCTCTTGAATTATTTAGAAAAATGTTGGCATCAGGGGAGCAACCAGACCATGTCACTATGATTGGTGTGCTATGCGCTTGTAGCCACGCAGGATTGGTTGATGAAGGGAAAAAGTACTTTTACTCAATGAGTGAGGAACATGGTTTGGTACCATTGAAGGACCATTATACATGTATGGTTGATCTGCTTGGTCGAGCTGGCTGCCTTATTGATGCCAAAAATTTGATAGAGGTCATGCCAATGCAACCTGATGCTGTTATATGGGGGTCTTTGCTTGCTGCTTGTAAAGGTCATCGTAACATTACCTTAGGGGAGTATGTGGCCGAGAAGCTCTTAGATATTGAACCTAAGAACTCTGGACCATATGTTCTTCTCTCAAACATGTATGCCGAGCTCGGGAGATGGGCTGATGTTATACGAGTAAGGAAGCTGATGAGGCAACGTGGAGTTGTCAAGCAGCCAGGTTGCAGTTGGATTGAAATACAGGGTCATGTGCATGTTTTCCTGGTGAAAGATAAAAGGCATCCTCAAAGGAAAGAAATACATGATGTTTTGAAGTTGCTTCTTGAACAGATGAGGCGATCTGGATATGTCGAAGATGCTTGTGATCTCGAGTCCGATGAAGAACATGGTGAATCCCAACTAACCTCATTGTACCACATCGATATGTTGGAAGATGCAGCAGTCGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009451 GO:0009743 GO:0009756 GO:0009987 GO:0010033 GO:0010182 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0023052 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

707

Amino Acids

79.45

Weight (kDa)

6.15

Isoelectric Point (pI)

45.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	59 - 85	9e-06	PPR repeat
PPR_2	PF13041	216 - 264	9.3e-08	PPR repeat family
PPR	PF01535	219 - 249	2.4e-07	PPR repeat
PPR_2	PF13041	349 - 397	5.6e-11	PPR repeat family
PPR	PF01535	352 - 381	7e-06	PPR repeat
PPR_2	PF13041	457 - 504	2.8e-08	PPR repeat family
PPR	PF01535	459 - 488	2.6e-08	PPR repeat
E_motif	PF20431	574 - 636	2.7e-23	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008675)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13600
fragaria_vesca	FvH4_7g02360 FvH4_7g02360
malus_domestica	MD02G1294800.v1.1 MD07G1031100.v1.1 MD07G1032100.v1.1
prunus_persica	Prupe.7G009700_v2.0.a1
pyrus_communis	pycom07g02270
rosa_chinensis	RchiOBHm_Chr1g0319691 RchiOBHm_Chr7g0218591
rosa_laevigata	RLG00000002327 RLG00000030463
rosa_multiflora	Rmu_sc0001301.1_g000024
rosa_roxburghii	Rroxscaffold_3G00240770
rosa_rugosa	Rorug01G0029400 Rorug07G0178600
rosa_samantha	Rh1BG038400 Rh7AG319700 Rh7BG311700 Rh7CG336600 Rh7DG318700
rosa_wichuraiana	Rw0G015750 Rw7G027230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	790
Acc36I	ACCTGC	1 cut(s)	479
Acc65I	GGTACC	1 cut(s)	1576
AccB1I	GGYRCC	1 cut(s)	1576
AciI	CCGC	1 cut(s)	801
AclWI	GGATC	1 cut(s)	1330
AcoI	YGGCCR	2 cut(s)	1336, 1749
AcsI	RAATTY	5 cut(s)	361, 439, 519, 1291, 1648
AcuI	CTGAAG	1 cut(s)	1151
AcvI	CACGTG	1 cut(s)	110
AfaI	GTAC	7 cut(s)	548, 590, 1082, 1230, 1544, 1578, 2084
AfiI	CCNNNNNNNGG	3 cut(s)	1135, 1264, 1824
AflIII	ACRYGT	3 cut(s)	1231, 1598, 1809
AjiI	CACGTC	1 cut(s)	119
AjnI	CCWGG	5 cut(s)	923, 1257, 1379, 1888, 1932
AjuI	GAANNNNNNNTTGG	4 cut(s)	447, 479, 1095, 1127
AleI	CACNNNNGTG	1 cut(s)	831
AloI	GAACNNNNNNTCC	4 cut(s)	728, 760, 1779, 1811
AluBI	AGCT	8 cut(s)	76, 795, 1210, 1430, 1625, 1759, 1822, 1858
AluI	AGCT	8 cut(s)	76, 795, 1210, 1430, 1625, 1759, 1822, 1858
Alw21I	GWGCWC	4 cut(s)	356, 475, 619, 1824
Alw26I	GTCTC	1 cut(s)	1060
Alw44I	GTGCAC	1 cut(s)	615
AlwI	GGATC	1 cut(s)	1330
Ama87I	CYCGRG	2 cut(s)	1823, 2039
AoxI	GGCC	4 cut(s)	694, 1107, 1336, 1749
ApaLI	GTGCAC	1 cut(s)	615
ApeKI	GCWGC	6 cut(s)	1013, 1207, 1629, 1706, 1885, 2108
ApoI	RAATTY	5 cut(s)	361, 439, 519, 1291, 1648
AseI	ATTAAT	1 cut(s)	287
Asp700I	GAANNNNTTC	1 cut(s)	257
Asp718I	GGTACC	1 cut(s)	1576
AspLEI	GCGC	2 cut(s)	791, 1505
AspS9I	GGNCC	4 cut(s)	695, 1108, 1588, 1787
AsuHPI	GGTGA	3 cut(s)	50, 1948, 2072
AvaI	CYCGRG	2 cut(s)	1823, 2039
AvaII	GGWCC	2 cut(s)	1588, 1787
AxyI	CCTNAGG	1 cut(s)	1735
BaeGI	GKGCMC	1 cut(s)	619
BanI	GGYRCC	1 cut(s)	1576
BanII	GRGCYC	1 cut(s)	1824
BbrPI	CACGTG	1 cut(s)	110
Bbv12I	GWGCWC	4 cut(s)	356, 475, 619, 1824
BbvI	GCAGC	5 cut(s)	1025, 1219, 1616, 1693, 1897
BccI	CCATC	7 cut(s)	361, 626, 727, 932, 1033, 1328, 1824
BceAI	ACGGC	1 cut(s)	1323
BcgI	CGANNNNNNTGC	4 cut(s)	525, 559, 1611, 1645
BciT130I	CCWGG	5 cut(s)	925, 1259, 1381, 1890, 1934
BciVI	GTATCC	1 cut(s)	1387
BcoDI	GTCTC	1 cut(s)	1060
BfaI	CTAG	1 cut(s)	9
BfmI	CTRYAG	1 cut(s)	1205
BfuAI	ACCTGC	1 cut(s)	479
BfuI	GTATCC	1 cut(s)	1387
BisI	GCNGC	6 cut(s)	1014, 1208, 1630, 1707, 1886, 2109
BlsI	GCNGC	6 cut(s)	1015, 1209, 1631, 1708, 1887, 2110
BmcAI	AGTACT	1 cut(s)	1544
Bme1390I	CCNGG	5 cut(s)	925, 1259, 1381, 1890, 1934
Bme18I	GGWCC	2 cut(s)	1588, 1787
BmeT110I	CYCGRG	2 cut(s)	1823, 2039
BmgBI	CACGTC	1 cut(s)	119
BmgT120I	GGNCC	4 cut(s)	695, 1108, 1588, 1787
BmiI	GGNNCC	1 cut(s)	1578
BmrFI	CCNGG	5 cut(s)	925, 1259, 1381, 1890, 1934
Bpu10I	CCTNAGC	1 cut(s)	339
Bsa29I	ATCGAT	1 cut(s)	2091
BsaAI	YACGTR	1 cut(s)	110
BsaBI	GATNNNNATC	1 cut(s)	167
BsaJI	CCNNGG	4 cut(s)	156, 711, 975, 1111
BsaWI	WCCGGW	1 cut(s)	645
BsaXI	ACNNNNNCTCC	4 cut(s)	728, 758, 1107, 1137
Bsc4I	CCNNNNNNNGG	3 cut(s)	1135, 1264, 1824
Bse1I	ACTGG	3 cut(s)	349, 756, 771
Bse21I	CCTNAGG	1 cut(s)	1735
Bse3DI	GCAATG	1 cut(s)	883
Bse8I	GATNNNNATC	1 cut(s)	167
BseBI	CCWGG	5 cut(s)	925, 1259, 1381, 1890, 1934
BseCI	ATCGAT	1 cut(s)	2091
BseDI	CCNNGG	4 cut(s)	156, 711, 975, 1111
BseGI	GGATG	9 cut(s)	90, 123, 220, 642, 760, 865, 948, 1041, 1951
BseJI	GATNNNNATC	1 cut(s)	167
BseLI	CCNNNNNNNGG	3 cut(s)	1135, 1264, 1824
BseMI	GCAATG	1 cut(s)	883
BseMII	CTCAG	1 cut(s)	330
BseNI	ACTGG	3 cut(s)	349, 756, 771
BseRI	GAGGAG	1 cut(s)	1115
BseSI	GKGCMC	1 cut(s)	619
BseXI	GCAGC	5 cut(s)	1025, 1219, 1616, 1693, 1897
BseYI	CCCAGC	2 cut(s)	384, 697
BsgI	GTGCAG	2 cut(s)	507, 558
BshFI	GGCC	4 cut(s)	696, 1109, 1338, 1751
BshNI	GGYRCC	1 cut(s)	1576
BshVI	ATCGAT	1 cut(s)	2091
BsiHKAI	GWGCWC	4 cut(s)	356, 475, 619, 1824
BsiHKCI	CYCGRG	2 cut(s)	1823, 2039
BsiSI	CCGG	1 cut(s)	646
BslI	CCNNNNNNNGG	3 cut(s)	1135, 1264, 1824
BsmAI	GTCTC	1 cut(s)	1060
BsmI	GAATGC	1 cut(s)	1390
BsnI	GGCC	4 cut(s)	696, 1109, 1338, 1751
BsoBI	CYCGRG	2 cut(s)	1823, 2039
Bsp1286I	GDGCHC	4 cut(s)	356, 475, 619, 1824
Bsp1407I	TGTACA	1 cut(s)	1228
Bsp143I	GATC	6 cut(s)	862, 1201, 1322, 1609, 2009, 2035
Bsp19I	CCATGG	1 cut(s)	975
BspACI	CCGC	1 cut(s)	801
BspANI	GGCC	4 cut(s)	696, 1109, 1338, 1751
BspCNI	CTCAG	1 cut(s)	331
BspDI	ATCGAT	1 cut(s)	2091
BspLI	GGNNCC	1 cut(s)	1578
BspMAI	CTGCAG	1 cut(s)	1209
BspMI	ACCTGC	1 cut(s)	479
BspPI	GGATC	1 cut(s)	1330
BspQI	GCTCTTC	1 cut(s)	1263
BspT107I	GGYRCC	1 cut(s)	1576
BsrDI	GCAATG	1 cut(s)	883
BsrGI	TGTACA	1 cut(s)	1228
BsrI	ACTGG	3 cut(s)	349, 756, 771
BssECI	CCNNGG	4 cut(s)	156, 711, 975, 1111
BssMI	GATC	6 cut(s)	862, 1201, 1322, 1609, 2009, 2035
BssT1I	CCWWGG	3 cut(s)	711, 975, 1111
Bst2UI	CCWGG	5 cut(s)	925, 1259, 1381, 1890, 1934
Bst4CI	ACNGT	3 cut(s)	231, 655, 668
Bst6I	CTCTTC	3 cut(s)	1098, 1127, 1263
BstAPI	GCANNNNNTGC	2 cut(s)	113, 1073
BstAUI	TGTACA	1 cut(s)	1228
BstBAI	YACGTR	1 cut(s)	110
BstC8I	GCNNGC	9 cut(s)	223, 703, 787, 793, 1003, 1217, 1221, 1627, 1704
BstDEI	CTNAG	5 cut(s)	339, 476, 1735, 1762, 1776
BstDSI	CCRYGG	1 cut(s)	975
BstEII	GGTNACC	1 cut(s)	38
BstF5I	GGATG	9 cut(s)	90, 123, 220, 642, 760, 865, 948, 1041, 1951
BstHHI	GCGC	2 cut(s)	791, 1505
BstKTI	GATC	6 cut(s)	865, 1204, 1325, 1612, 2012, 2038
BstMAI	GTCTC	1 cut(s)	1060
BstMBI	GATC	6 cut(s)	862, 1201, 1322, 1609, 2009, 2035
BstNI	CCWGG	5 cut(s)	925, 1259, 1381, 1890, 1934
BstNSI	RCATGY	5 cut(s)	789, 1235, 1602, 1813, 1928
BstPI	GGTNACC	1 cut(s)	38
BstSCI	CCNGG	5 cut(s)	923, 1257, 1379, 1888, 1932
BstSFI	CTRYAG	1 cut(s)	1205
BstSLI	GKGCMC	1 cut(s)	619
BstV1I	GCAGC	5 cut(s)	1025, 1219, 1616, 1693, 1897
BstX2I	RGATCY	1 cut(s)	1322
BstXI	CCANNNNNNTGG	1 cut(s)	1396
BstYI	RGATCY	1 cut(s)	1322
Bsu15I	ATCGAT	1 cut(s)	2091
Bsu36I	CCTNAGG	1 cut(s)	1735
BsuI	GTATCC	1 cut(s)	1387
BsuRI	GGCC	4 cut(s)	696, 1109, 1338, 1751
BsuTUI	ATCGAT	1 cut(s)	2091
BtgI	CCRYGG	1 cut(s)	975
BtrI	CACGTC	1 cut(s)	119
BtsCI	GGATG	9 cut(s)	90, 123, 220, 642, 760, 865, 948, 1041, 1951
BtsIMutI	CAGTG	2 cut(s)	356, 778
BveI	ACCTGC	1 cut(s)	479
Cac8I	GCNNGC	9 cut(s)	223, 703, 787, 793, 1003, 1217, 1221, 1627, 1704
CfoI	GCGC	2 cut(s)	791, 1505
Cfr13I	GGNCC	4 cut(s)	695, 1108, 1588, 1787
ClaI	ATCGAT	1 cut(s)	2091
Csp6I	GTAC	7 cut(s)	547, 589, 1081, 1229, 1543, 1577, 2083
CspCI	CAANNNNNGTGG	2 cut(s)	49, 84
CviQI	GTAC	7 cut(s)	547, 589, 1081, 1229, 1543, 1577, 2083
DdeI	CTNAG	5 cut(s)	339, 476, 1735, 1762, 1776
DpnI	GATC	6 cut(s)	864, 1203, 1324, 1611, 2011, 2037
DpnII	GATC	6 cut(s)	862, 1201, 1322, 1609, 2009, 2035
DraI	TTTAAA	1 cut(s)	1351
EaeI	YGGCCR	2 cut(s)	1336, 1749
Eam1104I	CTCTTC	3 cut(s)	1098, 1127, 1263
EarI	CTCTTC	3 cut(s)	1098, 1127, 1263
Ecl136II	GAGCTC	1 cut(s)	1822
Eco130I	CCWWGG	3 cut(s)	711, 975, 1111
Eco24I	GRGCYC	1 cut(s)	1824
Eco47I	GGWCC	2 cut(s)	1588, 1787
Eco53kI	GAGCTC	1 cut(s)	1822
Eco57I	CTGAAG	1 cut(s)	1151
Eco72I	CACGTG	1 cut(s)	110
Eco81I	CCTNAGG	1 cut(s)	1735
Eco88I	CYCGRG	2 cut(s)	1823, 2039
Eco91I	GGTNACC	1 cut(s)	38
EcoICRI	GAGCTC	1 cut(s)	1822
EcoO109I	RGGNCCY	1 cut(s)	1108
EcoO65I	GGTNACC	1 cut(s)	38
EcoRI	GAATTC	2 cut(s)	361, 1291
EcoRII	CCWGG	5 cut(s)	923, 1257, 1379, 1888, 1932
EcoT14I	CCWWGG	3 cut(s)	711, 975, 1111
EcoT22I	ATGCAT	2 cut(s)	92, 883
EcoT38I	GRGCYC	1 cut(s)	1824
ErhI	CCWWGG	3 cut(s)	711, 975, 1111
FalI	AAGNNNNNCTT	4 cut(s)	241, 273, 1095, 1127
FauNDI	CATATG	1 cut(s)	1792
Fnu4HI	GCNGC	6 cut(s)	1014, 1208, 1630, 1707, 1886, 2109
FokI	GGATG	9 cut(s)	77, 110, 227, 649, 767, 872, 955, 1048, 1938
FriOI	GRGCYC	1 cut(s)	1824
Fsp4HI	GCNGC	6 cut(s)	1014, 1208, 1630, 1707, 1886, 2109
FspBI	CTAG	1 cut(s)	9
FspI	TGCGCA	1 cut(s)	790
GlaI	GCGC	2 cut(s)	790, 1504
GluI	GCNGC	6 cut(s)	1014, 1208, 1630, 1707, 1886, 2109
GsaI	CCCAGC	2 cut(s)	388, 701
HaeIII	GGCC	4 cut(s)	696, 1109, 1338, 1751
HapII	CCGG	1 cut(s)	646
HhaI	GCGC	2 cut(s)	791, 1505
Hin6I	GCGC	2 cut(s)	789, 1503
HinP1I	GCGC	2 cut(s)	789, 1503
HindIII	AAGCTT	1 cut(s)	793
HinfI	GANTC	8 cut(s)	56, 83, 404, 1116, 1139, 1171, 2042, 2063
HpaII	CCGG	1 cut(s)	646
HphI	GGTGA	3 cut(s)	50, 1948, 2072
Hpy166II	GTNNAC	3 cut(s)	617, 1029, 1083
Hpy188I	TCNGA	5 cut(s)	95, 160, 556, 967, 2047
Hpy8I	GTNNAC	3 cut(s)	617, 1029, 1083
Hpy99I	CGWCG	2 cut(s)	123, 1344
HpyAV	CCTTC	3 cut(s)	806, 1526, 1579
HpyCH4III	ACNGT	3 cut(s)	231, 655, 668
HpyCH4IV	ACGT	3 cut(s)	109, 118, 1870
HpyF3I	CTNAG	5 cut(s)	339, 476, 1735, 1762, 1776
HpySE526I	ACGT	3 cut(s)	109, 118, 1870
HspAI	GCGC	2 cut(s)	789, 1503
KpnI	GGTACC	1 cut(s)	1580
Kzo9I	GATC	6 cut(s)	862, 1201, 1322, 1609, 2009, 2035
LguI	GCTCTTC	1 cut(s)	1263
LmnI	GCTCC	1 cut(s)	1465
Lsp1109I	GCAGC	5 cut(s)	1025, 1219, 1616, 1693, 1897
MaeI	CTAG	1 cut(s)	9
MaeII	ACGT	3 cut(s)	109, 118, 1870
MaeIII	GTNAC	4 cut(s)	38, 1415, 1480, 1724
MalI	GATC	6 cut(s)	864, 1203, 1324, 1611, 2011, 2037
MboI	GATC	6 cut(s)	862, 1201, 1322, 1609, 2009, 2035
MflI	RGATCY	1 cut(s)	1322
MhlI	GDGCHC	4 cut(s)	356, 475, 619, 1824
MlyI	GAGTC	5 cut(s)	50, 77, 1110, 1148, 2051
MmeI	TCCRAC	2 cut(s)	1880, 2079
Mph1103I	ATGCAT	2 cut(s)	92, 883
MroXI	GAANNNNTTC	1 cut(s)	257
MseI	TTAA	6 cut(s)	278, 287, 302, 332, 494, 1350
MslI	CAYNNNNRTG	7 cut(s)	287, 831, 1230, 1394, 1667, 1923, 2093
MspI	CCGG	1 cut(s)	646
MspR9I	CCNGG	5 cut(s)	925, 1259, 1381, 1890, 1934
Mva1269I	GAATGC	1 cut(s)	1390
MvaI	CCWGG	5 cut(s)	925, 1259, 1381, 1890, 1934
NcoI	CCATGG	1 cut(s)	975
NdeI	CATATG	1 cut(s)	1792
NdeII	GATC	6 cut(s)	862, 1201, 1322, 1609, 2009, 2035
NlaIV	GGNNCC	1 cut(s)	1578
NmeAIII	GCCGAG	2 cut(s)	1777, 1843
NmuCI	GTSAC	2 cut(s)	38, 1480
NsbI	TGCGCA	1 cut(s)	790
NsiI	ATGCAT	2 cut(s)	92, 883
NspI	RCATGY	5 cut(s)	789, 1235, 1602, 1813, 1928
OliI	CACNNNNGTG	1 cut(s)	831
PaeI	GCATGC	1 cut(s)	789
PaeR7I	CTCGAG	1 cut(s)	2039
PciI	ACATGT	3 cut(s)	1231, 1598, 1809
PciSI	GCTCTTC	1 cut(s)	1263
PcsI	WCGNNNNNNNCGW	1 cut(s)	115
PctI	GAATGC	1 cut(s)	1390
PdmI	GAANNNNTTC	1 cut(s)	257
PfeI	GAWTC	3 cut(s)	404, 1171, 2063
PflFI	GACNNNGTC	1 cut(s)	1478
PfoI	TCCNGGA	1 cut(s)	1379
PkrI	GCNGC	6 cut(s)	1015, 1209, 1631, 1708, 1887, 2110
PleI	GAGTC	5 cut(s)	50, 77, 1110, 1147, 2050
PmaCI	CACGTG	1 cut(s)	110
PmlI	CACGTG	1 cut(s)	110
PpsI	GAGTC	5 cut(s)	50, 77, 1110, 1147, 2050
Ppu21I	YACGTR	1 cut(s)	110
PscI	ACATGT	3 cut(s)	1231, 1598, 1809
PshBI	ATTAAT	1 cut(s)	287
Psp124BI	GAGCTC	1 cut(s)	1824
Psp6I	CCWGG	5 cut(s)	923, 1257, 1379, 1888, 1932
PspCI	CACGTG	1 cut(s)	110
PspEI	GGTNACC	1 cut(s)	38
PspFI	CCCAGC	2 cut(s)	384, 697
PspGI	CCWGG	5 cut(s)	923, 1257, 1379, 1888, 1932
PspN4I	GGNNCC	1 cut(s)	1578
PspPI	GGNCC	4 cut(s)	695, 1108, 1588, 1787
PstI	CTGCAG	1 cut(s)	1209
PsuI	RGATCY	1 cut(s)	1322
PsyI	GACNNNGTC	1 cut(s)	1478
RsaI	GTAC	7 cut(s)	548, 590, 1082, 1230, 1544, 1578, 2084
RsaNI	GTAC	7 cut(s)	547, 589, 1081, 1229, 1543, 1577, 2083
RseI	CAYNNNNRTG	7 cut(s)	287, 831, 1230, 1394, 1667, 1923, 2093
SacI	GAGCTC	1 cut(s)	1824
SapI	GCTCTTC	1 cut(s)	1263
SaqAI	TTAA	6 cut(s)	278, 287, 302, 332, 494, 1350
SatI	GCNGC	6 cut(s)	1014, 1208, 1630, 1707, 1886, 2109
Sau3AI	GATC	6 cut(s)	862, 1201, 1322, 1609, 2009, 2035
Sau96I	GGNCC	4 cut(s)	695, 1108, 1588, 1787
ScaI	AGTACT	1 cut(s)	1544
SchI	GAGTC	5 cut(s)	50, 77, 1110, 1148, 2051
ScrFI	CCNGG	5 cut(s)	925, 1259, 1381, 1890, 1934
SduI	GDGCHC	4 cut(s)	356, 475, 619, 1824
SfcI	CTRYAG	1 cut(s)	1205
Sfr274I	CTCGAG	1 cut(s)	2039
SinI	GGWCC	2 cut(s)	1588, 1787
SlaI	CTCGAG	1 cut(s)	2039
SmiMI	CAYNNNNRTG	7 cut(s)	287, 831, 1230, 1394, 1667, 1923, 2093
SmlI	CTYRAG	1 cut(s)	2039
SmoI	CTYRAG	1 cut(s)	2039
SphI	GCATGC	1 cut(s)	789
SsiI	CCGC	1 cut(s)	801
SspI	AATATT	1 cut(s)	416
SspMI	CTAG	1 cut(s)	9
SstI	GAGCTC	1 cut(s)	1824
StyD4I	CCNGG	5 cut(s)	923, 1257, 1379, 1888, 1932
StyI	CCWWGG	3 cut(s)	711, 975, 1111
TaaI	ACNGT	3 cut(s)	231, 655, 668
TaiI	ACGT	3 cut(s)	112, 121, 1873
TaqI	TCGA	6 cut(s)	54, 365, 1621, 2022, 2040, 2091
TatI	WGTACW	3 cut(s)	588, 1228, 1542
TfiI	GAWTC	3 cut(s)	404, 1171, 2063
Tru1I	TTAA	6 cut(s)	278, 287, 302, 332, 494, 1350
Tru9I	TTAA	6 cut(s)	278, 287, 302, 332, 494, 1350
TscAI	CASTG	2 cut(s)	356, 778
TseFI	GTSAC	2 cut(s)	38, 1480
TseI	GCWGC	6 cut(s)	1013, 1207, 1629, 1706, 1885, 2108
Tsp45I	GTSAC	2 cut(s)	38, 1480
TspDTI	ATGAA	9 cut(s)	305, 468, 512, 653, 771, 1116, 1328, 1545, 2064
TspGWI	ACGGA	1 cut(s)	1260
TspRI	CASTG	2 cut(s)	356, 778
Tth111I	GACNNNGTC	1 cut(s)	1478
VneI	GTGCAC	1 cut(s)	615
VpaK11BI	GGWCC	2 cut(s)	1588, 1787
VspI	ATTAAT	1 cut(s)	287
XapI	RAATTY	5 cut(s)	361, 439, 519, 1291, 1648
XceI	RCATGY	5 cut(s)	789, 1235, 1602, 1813, 1928
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1163, 1896
XhoI	CTCGAG	1 cut(s)	2039
XmnI	GAANNNNTTC	1 cut(s)	257
XspI	CTAG	1 cut(s)	9
ZrmI	AGTACT	1 cut(s)	1544
Zsp2I	ATGCAT	2 cut(s)	92, 883

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.