Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0008675

Physical Location & Seq

Genomic Coordinates Forward (+)

32231867 .. 32233990

Gene Structure 2124 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002327

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGTGGGATTTAGACAAGGATTGCTCAAACAAATTGTGGGTGACCTTGCTTTCGTCGACTCCTCACCCTTCGGGAAGCTTTTGGACTCCTGCATTCGTACCAAGTCGGCGCGTGATGCCCGTCGCGTCCACGCCCGCGTCATCAAAACCCAGTTTTCTTCAGAGGTTTTCATCCAGAACAGGCTCATCGACGCGTATGGGAAATGTGGTTCATTCGATGATGCACGTAAGGTGTTTGATAAAATGCCTGAGAGGAACACTTTCAGTTGGAACTGCATCATTACCGCATTTATGAAGTTGGGTTTTGTTGATGAGGCTATGCAGAGTTTTAGGTCGATGCCGGAGCCCGACCAGTGCTCATGGAACTCGATGGTTTCGGGGTTTGCACAGCATGGTCGCTTTGAAGAAGCTTTGGAATATTTTGTTAACATGCATGGGGAGGATTTTGTTTTGAATGAATACACGTTCGGTAGCGCTCTTAGTGCTTGTGCGGGTTTAAGAGAGCTGAAAATGGGTGTCCAAATTCATGGTTTCATTGCGAAATCTTGTTACTCTTCAGATGTTTATATGGGGTCTGCACTTATTGATATGTACTCAAAATGTGGGAATGTTGCTTCTGCACAAAGGGTATTTGATTGCATGAGTGTGCGAAATGTTGTTTCTTGGAACAGTTTGATTACTTGTTATGAGCAAAATGGTCCAGCAAGCGAAGCCGTACAAGTGTTTGTGAGGATGATGGATTGTGGGTTCAAACCAGATGAGCTGACTTTAGCCAGTATGGTAAGTGCTTGTGCGAGCTTGTCCGCAGTGAAAGGAGGTCAGCAAATACATGCTTGCGTTATGAAATGTGATAAATACAGGAATGATGTTGTATTGGGCAATGCATTAGTTGATATGTATGCAAAATGCAACAGAATAAATGAGGCCAGAAGGGTTTTCGATGGGATGCCTATCAGAAATGTGGTCTCAGAAACTTCCATGGTAAGTGGATATGCAAAGGCGGCAAGTGTAGAAGTTGCAAGGTCGTTGTTTACAAAGATGATGGAGAGGAATGTAGTCTCTTGGAATGCACTTATTGCAGGGTACACACAGAATGGAGAGAATGAAGAGGCCCTTGGACTCTTTCTCCTCTTGAAAAGAGAGTCTGTTTGGCCCACCCACTACACATTTGCAAATCTACTCAATGCTTGTGCAAGTCTTGTTGATCTGCAGCTTGGCAAGCAGGCTCATTCACACATATTGAAGCATGGTTTTCAATTCCAGGTTGGTGAAGAGCCTGATATATTTGTTGGAAATTCTCTAATAGATATGTACATGAAATGTGGGTCTATTGAAGATGGCTGTCAGGTGTTTAGAAGTATGTTGGAAAGGGATCATGTCTCGTGGAATGCTATGATTGTGGGACATGCGCAAAATGGTTATGGGACTGAAGCTCTTGAAATATTTAGAAAAATGTTGGTGTCAGGGGAGCAACCAGACCATGTTACTATGATTGGTGTTCTCTGTGCTTGTAGCCACGCAGGACTGGTTGAAGAAGGGAGAAATTTTTTTTACACAATGAATGAAGAGCACGGGGTGGTACCATTGAAGGACCATTATACATGTATGGTTGATCTACTTGGTCGAGCGGAACAAATGAAGCGACATGGATATGTACAAGATGCTGGTGACTACGAGTCTTATGAAGACCAAGCTGAATCTCAACTAACTTCATTTTTTGAAATGGATATGTCAGAAGATGTAGCTGTTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009451 GO:0009743 GO:0009756 GO:0009987 GO:0010033 GO:0010182 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0023052 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

585

Amino Acids

65.29

Weight (kDa)

5.45

Isoelectric Point (pI)

44.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	116 - 164	5.4e-08	PPR repeat family
PPR	PF01535	120 - 147	3.7e-07	PPR repeat
PPR_2	PF13041	217 - 265	9.9e-10	PPR repeat family
PPR	PF01535	220 - 250	2.2e-06	PPR repeat
PPR_2	PF13041	350 - 398	1.2e-10	PPR repeat family
PPR	PF01535	353 - 382	5.5e-06	PPR repeat
PPR_2	PF13041	458 - 505	6e-08	PPR repeat family
PPR	PF01535	460 - 489	5.4e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008675)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13600
fragaria_vesca	FvH4_7g02360 FvH4_7g02360
malus_domestica	MD02G1294800.v1.1 MD07G1031100.v1.1 MD07G1032100.v1.1
prunus_persica	Prupe.7G009700_v2.0.a1
pyrus_communis	pycom07g02270
rosa_chinensis	RchiOBHm_Chr1g0319691 RchiOBHm_Chr7g0218591
rosa_laevigata	RLG00000002327 RLG00000030463
rosa_multiflora	Rmu_sc0001301.1_g000024
rosa_roxburghii	Rroxscaffold_3G00240770
rosa_rugosa	Rorug01G0029400 Rorug07G0178600
rosa_samantha	Rh1BG038400 Rh7AG319700 Rh7BG311700 Rh7CG336600 Rh7DG318700
rosa_wichuraiana	Rw0G015750 Rw7G027230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1410
Acc65I	GGTACC	1 cut(s)	1579
AccB1I	GGYRCC	1 cut(s)	1579
AccBSI	CCGCTC	1 cut(s)	1628
AccI	GTMKAC	1 cut(s)	57
AccII	CGCG	4 cut(s)	112, 126, 138, 194
AciI	CCGC	6 cut(s)	136, 285, 491, 804, 1001, 1628
AclWI	GGATC	1 cut(s)	1380
AcsI	RAATTY	3 cut(s)	522, 1294, 1543
AcuI	CTGAAG	3 cut(s)	144, 540, 1449
AdeI	CACNNNGTG	1 cut(s)	1576
AfaI	GTAC	7 cut(s)	100, 593, 717, 1085, 1313, 1581, 1656
AfeI	AGCGCT	1 cut(s)	475
AflIII	ACRYGT	3 cut(s)	192, 462, 1601
AhdI	GACNNNNNGTC	1 cut(s)	1675
AjnI	CCWGG	1 cut(s)	1260
AjuI	GAANNNNNNNTTGG	2 cut(s)	1098, 1130
AloI	GAACNNNNNNTCC	4 cut(s)	193, 225, 731, 763
AluBI	AGCT	9 cut(s)	79, 410, 505, 763, 798, 1213, 1433, 1694, 1745
AluI	AGCT	9 cut(s)	79, 410, 505, 763, 798, 1213, 1433, 1694, 1745
Alw21I	GWGCWC	2 cut(s)	359, 1572
Alw26I	GTCTC	3 cut(s)	970, 1063, 1384
AlwI	GGATC	1 cut(s)	1380
Aor51HI	AGCGCT	1 cut(s)	475
AoxI	GGCC	3 cut(s)	924, 1110, 1151
ApeKI	GCWGC	1 cut(s)	1210
ApoI	RAATTY	3 cut(s)	522, 1294, 1543
ArsI	GACNNNNNNTTYG	2 cut(s)	35, 67
Asp700I	GAANNNNTTC	1 cut(s)	260
Asp718I	GGTACC	1 cut(s)	1579
AspLEI	GCGC	3 cut(s)	112, 476, 1411
AspS9I	GGNCC	4 cut(s)	698, 1111, 1152, 1591
AsuHPI	GGTGA	4 cut(s)	53, 57, 1280, 1679
AvaII	GGWCC	2 cut(s)	698, 1591
BanI	GGYRCC	1 cut(s)	1579
BanII	GRGCYC	1 cut(s)	348
BauI	CACGAG	1 cut(s)	1381
BbsI	GAAGAC	1 cut(s)	1692
Bbv12I	GWGCWC	2 cut(s)	359, 1572
BbvI	GCAGC	1 cut(s)	1222
BccI	CCATC	5 cut(s)	364, 730, 935, 1036, 1331
BceAI	ACGGC	1 cut(s)	698
BciT130I	CCWGG	1 cut(s)	1262
BcoDI	GTCTC	3 cut(s)	970, 1063, 1384
BfmI	CTRYAG	1 cut(s)	1208
BfoI	RGCGCY	1 cut(s)	477
BisI	GCNGC	2 cut(s)	1002, 1211
BlsI	GCNGC	2 cut(s)	1003, 1212
Bme1390I	CCNGG	1 cut(s)	1262
Bme18I	GGWCC	2 cut(s)	698, 1591
BmeRI	GACNNNNNGTC	1 cut(s)	1675
BmgT120I	GGNCC	4 cut(s)	698, 1111, 1152, 1591
BmiI	GGNNCC	2 cut(s)	345, 1581
BmrFI	CCNGG	1 cut(s)	1262
BmrI	ACTGGG	1 cut(s)	145
BmsI	GCATC	6 cut(s)	106, 211, 285, 327, 936, 1651
BmuI	ACTGGG	1 cut(s)	145
BpiI	GAAGAC	1 cut(s)	1692
BsaAI	YACGTR	1 cut(s)	227
BsaBI	GATNNNNATC	1 cut(s)	950
BsaI	GGTCTC	1 cut(s)	970
BsaJI	CCNNGG	2 cut(s)	978, 1114
BsaXI	ACNNNNNCTCC	2 cut(s)	1110, 1140
Bse1I	ACTGG	4 cut(s)	151, 352, 774, 1530
Bse3DI	GCAATG	2 cut(s)	534, 886
Bse8I	GATNNNNATC	1 cut(s)	950
BseBI	CCWGG	1 cut(s)	1262
BseDI	CCNNGG	2 cut(s)	978, 1114
BseGI	GGATG	3 cut(s)	171, 738, 951
BseJI	GATNNNNATC	1 cut(s)	950
BseMI	GCAATG	2 cut(s)	534, 886
BseMII	CTCAG	2 cut(s)	240, 981
BseNI	ACTGG	4 cut(s)	151, 352, 774, 1530
BseRI	GAGGAG	2 cut(s)	52, 1118
BseXI	GCAGC	1 cut(s)	1222
BsgI	GTGCAG	2 cut(s)	561, 603
Bsh1236I	CGCG	4 cut(s)	112, 126, 138, 194
BshFI	GGCC	3 cut(s)	926, 1112, 1153
BshNI	GGYRCC	1 cut(s)	1579
BsiHKAI	GWGCWC	2 cut(s)	359, 1572
BsiSI	CCGG	1 cut(s)	341
BslFI	GGGAC	2 cut(s)	1416, 1438
BsmAI	GTCTC	3 cut(s)	970, 1063, 1384
BsmFI	GGGAC	2 cut(s)	1416, 1438
BsmI	GAATGC	3 cut(s)	93, 1072, 1393
BsnI	GGCC	3 cut(s)	926, 1112, 1153
Bso31I	GGTCTC	1 cut(s)	970
Bsp1286I	GDGCHC	3 cut(s)	348, 359, 1572
Bsp1407I	TGTACA	2 cut(s)	1311, 1654
Bsp143I	GATC	3 cut(s)	1204, 1372, 1612
Bsp19I	CCATGG	1 cut(s)	978
BspACI	CCGC	6 cut(s)	136, 285, 491, 804, 1001, 1628
BspANI	GGCC	3 cut(s)	926, 1112, 1153
BspCNI	CTCAG	2 cut(s)	241, 980
BspFNI	CGCG	4 cut(s)	112, 126, 138, 194
BspLI	GGNNCC	2 cut(s)	345, 1581
BspMAI	CTGCAG	1 cut(s)	1212
BspPI	GGATC	1 cut(s)	1380
BspQI	GCTCTTC	2 cut(s)	1266, 1560
BspT107I	GGYRCC	1 cut(s)	1579
BspTNI	GGTCTC	1 cut(s)	970
BsrBI	CCGCTC	1 cut(s)	1628
BsrDI	GCAATG	2 cut(s)	534, 886
BsrGI	TGTACA	2 cut(s)	1311, 1654
BsrI	ACTGG	4 cut(s)	151, 352, 774, 1530
BssECI	CCNNGG	2 cut(s)	978, 1114
BssMI	GATC	3 cut(s)	1204, 1372, 1612
BssSI	CACGAG	1 cut(s)	1381
BssT1I	CCWWGG	2 cut(s)	978, 1114
Bst2BI	CACGAG	1 cut(s)	1381
Bst2UI	CCWGG	1 cut(s)	1262
Bst4CI	ACNGT	1 cut(s)	671
Bst6I	CTCTTC	4 cut(s)	559, 1101, 1266, 1560
BstAPI	GCANNNNNTGC	1 cut(s)	1076
BstAUI	TGTACA	2 cut(s)	1311, 1654
BstBAI	YACGTR	1 cut(s)	227
BstC8I	GCNNGC	6 cut(s)	136, 706, 796, 835, 1220, 1224
BstDEI	CTNAG	3 cut(s)	249, 479, 967
BstDSI	CCRYGG	1 cut(s)	978
BstEII	GGTNACC	1 cut(s)	41
BstF5I	GGATG	3 cut(s)	171, 738, 951
BstFNI	CGCG	4 cut(s)	112, 126, 138, 194
BstH2I	RGCGCY	1 cut(s)	477
BstHHI	GCGC	3 cut(s)	112, 476, 1411
BstKTI	GATC	3 cut(s)	1207, 1375, 1615
BstMAI	GTCTC	3 cut(s)	970, 1063, 1384
BstMBI	GATC	3 cut(s)	1204, 1372, 1612
BstMWI	GCNNNNNNNGC	6 cut(s)	116, 482, 710, 1001, 1076, 1219
BstNI	CCWGG	1 cut(s)	1262
BstNSI	RCATGY	4 cut(s)	433, 833, 1409, 1605
BstPI	GGTNACC	1 cut(s)	41
BstSCI	CCNGG	1 cut(s)	1260
BstSFI	CTRYAG	1 cut(s)	1208
BstUI	CGCG	4 cut(s)	112, 126, 138, 194
BstV1I	GCAGC	1 cut(s)	1222
BstV2I	GAAGAC	1 cut(s)	1692
BstXI	CCANNNNNNTGG	1 cut(s)	527
BsuRI	GGCC	3 cut(s)	926, 1112, 1153
BtgI	CCRYGG	1 cut(s)	978
BtsCI	GGATG	3 cut(s)	171, 738, 951
BtsI	GCAGTG	1 cut(s)	813
BtsIMutI	CAGTG	2 cut(s)	359, 813
Cac8I	GCNNGC	6 cut(s)	136, 706, 796, 835, 1220, 1224
CfoI	GCGC	3 cut(s)	112, 476, 1411
Cfr13I	GGNCC	4 cut(s)	698, 1111, 1152, 1591
CseI	GACGC	3 cut(s)	115, 127, 200
Csp6I	GTAC	7 cut(s)	99, 592, 716, 1084, 1312, 1580, 1655
CviQI	GTAC	7 cut(s)	99, 592, 716, 1084, 1312, 1580, 1655
DdeI	CTNAG	3 cut(s)	249, 479, 967
DpnI	GATC	3 cut(s)	1206, 1374, 1614
DpnII	GATC	3 cut(s)	1204, 1372, 1612
DraIII	CACNNNGTG	1 cut(s)	1576
DriI	GACNNNNNGTC	1 cut(s)	1675
Eam1104I	CTCTTC	4 cut(s)	559, 1101, 1266, 1560
Eam1105I	GACNNNNNGTC	1 cut(s)	1675
EarI	CTCTTC	4 cut(s)	559, 1101, 1266, 1560
Eco130I	CCWWGG	2 cut(s)	978, 1114
Eco24I	GRGCYC	1 cut(s)	348
Eco31I	GGTCTC	1 cut(s)	970
Eco47I	GGWCC	2 cut(s)	698, 1591
Eco47III	AGCGCT	1 cut(s)	475
Eco57I	CTGAAG	3 cut(s)	144, 540, 1449
Eco91I	GGTNACC	1 cut(s)	41
EcoO109I	RGGNCCY	1 cut(s)	1111
EcoO65I	GGTNACC	1 cut(s)	41
EcoRII	CCWGG	1 cut(s)	1260
EcoT14I	CCWWGG	2 cut(s)	978, 1114
EcoT22I	ATGCAT	2 cut(s)	435, 886
EcoT38I	GRGCYC	1 cut(s)	348
ErhI	CCWWGG	2 cut(s)	978, 1114
FalI	AAGNNNNNCTT	2 cut(s)	1098, 1130
FaqI	GGGAC	2 cut(s)	1416, 1438
FauI	CCCGC	2 cut(s)	143, 484
FblI	GTMKAC	1 cut(s)	57
Fnu4HI	GCNGC	2 cut(s)	1002, 1211
FokI	GGATG	3 cut(s)	158, 745, 958
FriOI	GRGCYC	1 cut(s)	348
Fsp4HI	GCNGC	2 cut(s)	1002, 1211
FspI	TGCGCA	1 cut(s)	1410
GlaI	GCGC	3 cut(s)	111, 475, 1410
GluI	GCNGC	2 cut(s)	1002, 1211
HaeII	RGCGCY	1 cut(s)	477
HaeIII	GGCC	3 cut(s)	926, 1112, 1153
HapII	CCGG	1 cut(s)	341
HgaI	GACGC	3 cut(s)	115, 127, 200
HhaI	GCGC	3 cut(s)	112, 476, 1411
Hin6I	GCGC	3 cut(s)	110, 474, 1409
HinP1I	GCGC	3 cut(s)	110, 474, 1409
HincII	GTYRAC	2 cut(s)	58, 427
HindII	GTYRAC	2 cut(s)	58, 427
HindIII	AAGCTT	2 cut(s)	77, 408
HinfI	GANTC	6 cut(s)	59, 86, 1119, 1142, 1676, 1697
HpaI	GTTAAC	1 cut(s)	427
HpaII	CCGG	1 cut(s)	341
HphI	GGTGA	4 cut(s)	53, 57, 1280, 1679
Hpy166II	GTNNAC	5 cut(s)	58, 130, 427, 1032, 1086
Hpy188I	TCNGA	5 cut(s)	163, 559, 956, 970, 1735
Hpy188III	TCNNGA	4 cut(s)	73, 175, 1132, 1436
Hpy8I	GTNNAC	5 cut(s)	58, 130, 427, 1032, 1086
Hpy99I	CGWCG	3 cut(s)	59, 126, 194
HpyAV	CCTTC	4 cut(s)	79, 924, 1529, 1582
HpyCH4III	ACNGT	1 cut(s)	671
HpyCH4IV	ACGT	2 cut(s)	226, 464
HpyF10VI	GCNNNNNNNGC	6 cut(s)	116, 482, 710, 1001, 1076, 1219
HpyF3I	CTNAG	3 cut(s)	249, 479, 967
HpySE526I	ACGT	2 cut(s)	226, 464
HspAI	GCGC	3 cut(s)	110, 474, 1409
KpnI	GGTACC	1 cut(s)	1583
KspAI	GTTAAC	1 cut(s)	427
Kzo9I	GATC	3 cut(s)	1204, 1372, 1612
LguI	GCTCTTC	2 cut(s)	1266, 1560
LmnI	GCTCC	2 cut(s)	343, 1468
Lsp1109I	GCAGC	1 cut(s)	1222
LweI	GCATC	6 cut(s)	106, 211, 285, 327, 936, 1651
MaeII	ACGT	2 cut(s)	226, 464
MaeIII	GTNAC	4 cut(s)	41, 548, 1483, 1667
MalI	GATC	3 cut(s)	1206, 1374, 1614
MbiI	CCGCTC	1 cut(s)	1628
MboI	GATC	3 cut(s)	1204, 1372, 1612
MhlI	GDGCHC	3 cut(s)	348, 359, 1572
MluCI	AATT	5 cut(s)	33, 522, 1256, 1294, 1543
MluI	ACGCGT	1 cut(s)	192
MlyI	GAGTC	5 cut(s)	53, 80, 1113, 1151, 1685
MmeI	TCCRAC	3 cut(s)	248, 1270, 1344
Mph1103I	ATGCAT	2 cut(s)	435, 886
MroXI	GAANNNNTTC	1 cut(s)	260
MseI	TTAA	2 cut(s)	426, 497
MslI	CAYNNNNRTG	2 cut(s)	644, 1650
MspI	CCGG	1 cut(s)	341
MspR9I	CCNGG	1 cut(s)	1262
Mva1269I	GAATGC	3 cut(s)	93, 1072, 1393
MvaI	CCWGG	1 cut(s)	1262
MvnI	CGCG	4 cut(s)	112, 126, 138, 194
MwoI	GCNNNNNNNGC	6 cut(s)	116, 482, 710, 1001, 1076, 1219
NcoI	CCATGG	1 cut(s)	978
NdeII	GATC	3 cut(s)	1204, 1372, 1612
NlaIV	GGNNCC	2 cut(s)	345, 1581
NmuCI	GTSAC	2 cut(s)	41, 1667
NsbI	TGCGCA	1 cut(s)	1410
NsiI	ATGCAT	2 cut(s)	435, 886
NspI	RCATGY	4 cut(s)	433, 833, 1409, 1605
PciI	ACATGT	1 cut(s)	1601
PciSI	GCTCTTC	2 cut(s)	1266, 1560
PctI	GAATGC	3 cut(s)	93, 1072, 1393
PdmI	GAANNNNTTC	1 cut(s)	260
PfeI	GAWTC	1 cut(s)	1697
PkrI	GCNGC	2 cut(s)	1003, 1212
PleI	GAGTC	5 cut(s)	53, 80, 1113, 1150, 1684
PpsI	GAGTC	5 cut(s)	53, 80, 1113, 1150, 1684
Ppu21I	YACGTR	1 cut(s)	227
PscI	ACATGT	1 cut(s)	1601
Psp6I	CCWGG	1 cut(s)	1260
PspEI	GGTNACC	1 cut(s)	41
PspGI	CCWGG	1 cut(s)	1260
PspN4I	GGNNCC	2 cut(s)	345, 1581
PspPI	GGNCC	4 cut(s)	698, 1111, 1152, 1591
PstI	CTGCAG	1 cut(s)	1212
RsaI	GTAC	7 cut(s)	100, 593, 717, 1085, 1313, 1581, 1656
RsaNI	GTAC	7 cut(s)	99, 592, 716, 1084, 1312, 1580, 1655
RseI	CAYNNNNRTG	2 cut(s)	644, 1650
SalI	GTCGAC	1 cut(s)	56
SapI	GCTCTTC	2 cut(s)	1266, 1560
SaqAI	TTAA	2 cut(s)	426, 497
SatI	GCNGC	2 cut(s)	1002, 1211
Sau3AI	GATC	3 cut(s)	1204, 1372, 1612
Sau96I	GGNCC	4 cut(s)	698, 1111, 1152, 1591
SchI	GAGTC	5 cut(s)	53, 80, 1113, 1151, 1685
ScrFI	CCNGG	1 cut(s)	1262
SduI	GDGCHC	3 cut(s)	348, 359, 1572
SfaNI	GCATC	6 cut(s)	106, 211, 285, 327, 936, 1651
SfcI	CTRYAG	1 cut(s)	1208
SinI	GGWCC	2 cut(s)	698, 1591
SmiMI	CAYNNNNRTG	2 cut(s)	644, 1650
Sse9I	AATT	5 cut(s)	33, 522, 1256, 1294, 1543
SsiI	CCGC	6 cut(s)	136, 285, 491, 804, 1001, 1628
SspI	AATATT	2 cut(s)	419, 1443
StyD4I	CCNGG	1 cut(s)	1260
StyI	CCWWGG	2 cut(s)	978, 1114
TaaI	ACNGT	1 cut(s)	671
TaiI	ACGT	2 cut(s)	229, 467
TaqI	TCGA	7 cut(s)	57, 189, 216, 335, 368, 939, 1624
TasI	AATT	5 cut(s)	33, 522, 1256, 1294, 1543
TatI	WGTACW	3 cut(s)	591, 1311, 1654
TauI	GCSGC	1 cut(s)	1004
TfiI	GAWTC	1 cut(s)	1697
Tru1I	TTAA	2 cut(s)	426, 497
Tru9I	TTAA	2 cut(s)	426, 497
TscAI	CASTG	2 cut(s)	359, 813
TseFI	GTSAC	2 cut(s)	41, 1667
TseI	GCWGC	1 cut(s)	1210
Tsp45I	GTSAC	2 cut(s)	41, 1667
TspRI	CASTG	2 cut(s)	359, 813
VpaK11BI	GGWCC	2 cut(s)	698, 1591
XapI	RAATTY	3 cut(s)	522, 1294, 1543
XceI	RCATGY	4 cut(s)	433, 833, 1409, 1605
XmiI	GTMKAC	1 cut(s)	57
XmnI	GAANNNNTTC	1 cut(s)	260
Zsp2I	ATGCAT	2 cut(s)	435, 886

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.