Nucleotidyltransferase domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G00060 AT4G00060 AT4G00060 AT4G00060 |
| fragaria_vesca | FvH4_7g11041 FvH4_7g11041 FvH4_7g11041 FvH4_7g11041 |
| malus_domestica | MD07G1115100.v1.1 |
| prunus_persica | Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 |
| pyrus_communis | pycom07g10010 |
| rosa_chinensis | RchiOBHm_Chr1g0349071 |
| rosa_laevigata | RLG00000028609 |
| rosa_multiflora | Rmu_sc0009855.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00306210 |
| rosa_rugosa | Rorug01G0199800 |
| rosa_samantha | Rh1AG217400 Rh1BG182800 Rh1CG201800 Rh1DG212800 |
| rosa_wichuraiana | Rw1G018480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3944 |
| AarI | CACCTGC | 2 cut(s) | 2328, 3604 |
| Acc16I | TGCGCA | 1 cut(s) | 3362 |
| Acc36I | ACCTGC | 2 cut(s) | 2328, 3604 |
| AccB1I | GGYRCC | 1 cut(s) | 4087 |
| AccI | GTMKAC | 6 cut(s) | 413, 792, 1474, 2655, 3778, 4564 |
| AccII | CGCG | 2 cut(s) | 1061, 2425 |
| AccIII | TCCGGA | 1 cut(s) | 3549 |
| AcoI | YGGCCR | 7 cut(s) | 283, 375, 759, 3065, 3179, 3412, 4360 |
| AcuI | CTGAAG | 6 cut(s) | 905, 1070, 1704, 3396, 3842, 4325 |
| AcyI | GRCGYC | 1 cut(s) | 3249 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 1799, 2063, 2333, 3063, 3705, 4031, 4243, 4637 |
| AflII | CTTAAG | 1 cut(s) | 3911 |
| AflIII | ACRYGT | 3 cut(s) | 890, 991, 4331 |
| AgeI | ACCGGT | 1 cut(s) | 3734 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 4244, 4276 |
| AleI | CACNNNNGTG | 1 cut(s) | 4049 |
| Alw21I | GWGCWC | 3 cut(s) | 467, 2407, 4658 |
| Alw26I | GTCTC | 5 cut(s) | 1404, 3033, 3564, 3684, 3985 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1448 |
| Ama87I | CYCGRG | 1 cut(s) | 4057 |
| Aor13HI | TCCGGA | 1 cut(s) | 3549 |
| ApeKI | GCWGC | 7 cut(s) | 815, 857, 1565, 2944, 2975, 3620, 4226 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 992, 1024, 1635, 1667 |
| AseI | ATTAAT | 1 cut(s) | 2508 |
| AsiGI | ACCGGT | 1 cut(s) | 3734 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1048, 2097, 4256 |
| AspA2I | CCTAGG | 2 cut(s) | 158, 1364 |
| AspLEI | GCGC | 3 cut(s) | 207, 2198, 3363 |
| AsuC2I | CCSGG | 1 cut(s) | 1028 |
| AsuII | TTCGAA | 2 cut(s) | 1893, 2398 |
| AvaI | CYCGRG | 1 cut(s) | 4057 |
| AvaII | GGWCC | 8 cut(s) | 49, 162, 247, 271, 2110, 2557, 3702, 3763 |
| AvrII | CCTAGG | 2 cut(s) | 158, 1364 |
| BaeGI | GKGCMC | 1 cut(s) | 4092 |
| BanI | GGYRCC | 1 cut(s) | 4087 |
| BauI | CACGAG | 2 cut(s) | 2406, 3483 |
| BbsI | GAAGAC | 3 cut(s) | 893, 1051, 3038 |
| Bbv12I | GWGCWC | 3 cut(s) | 467, 2407, 4658 |
| BbvI | GCAGC | 7 cut(s) | 827, 869, 1552, 2931, 2987, 3607, 4213 |
| BccI | CCATC | 8 cut(s) | 515, 1253, 3193, 3315, 3326, 3362, 4174, 4376 |
| BceAI | ACGGC | 6 cut(s) | 209, 298, 1299, 2592, 3080, 3399 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1494, 1528 |
| BclI | TGATCA | 2 cut(s) | 2704, 3487 |
| BcnI | CCSGG | 1 cut(s) | 1028 |
| BcoDI | GTCTC | 5 cut(s) | 1404, 3033, 3564, 3684, 3985 |
| BfmI | CTRYAG | 1 cut(s) | 3621 |
| BfoI | RGCGCY | 1 cut(s) | 208 |
| BfrI | CTTAAG | 1 cut(s) | 3911 |
| BfuAI | ACCTGC | 2 cut(s) | 2328, 3604 |
| BlnI | CCTAGG | 2 cut(s) | 158, 1364 |
| BmcAI | AGTACT | 2 cut(s) | 1921, 2669 |
| Bme18I | GGWCC | 8 cut(s) | 49, 162, 247, 271, 2110, 2557, 3702, 3763 |
| BmeT110I | CYCGRG | 1 cut(s) | 4057 |
| BmrI | ACTGGG | 1 cut(s) | 3316 |
| BmsI | GCATC | 7 cut(s) | 802, 974, 1816, 2257, 3561, 4105, 4639 |
| BmuI | ACTGGG | 1 cut(s) | 3316 |
| BpiI | GAAGAC | 3 cut(s) | 893, 1051, 3038 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2308, 2340, 2975, 3007 |
| BpmI | CTGGAG | 3 cut(s) | 413, 2373, 3668 |
| Bpu14I | TTCGAA | 2 cut(s) | 1893, 2398 |
| BpuEI | CTTGAG | 4 cut(s) | 896, 1388, 4321, 4642 |
| BpuMI | CCSGG | 1 cut(s) | 1028 |
| Bsa29I | ATCGAT | 2 cut(s) | 480, 3457 |
| BsaHI | GRCGYC | 1 cut(s) | 3249 |
| BsaI | GGTCTC | 1 cut(s) | 3684 |
| BsaJI | CCNNGG | 9 cut(s) | 158, 286, 1290, 1364, 2711, 3167, 3192, 3299, 3698 |
| BsaWI | WCCGGW | 2 cut(s) | 3549, 3734 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 1799, 2063, 2333, 3063, 3705, 4031, 4243, 4637 |
| Bse118I | RCCGGY | 2 cut(s) | 3734, 4362 |
| Bse3DI | GCAATG | 5 cut(s) | 543, 1345, 1810, 2967, 3509 |
| BseAI | TCCGGA | 1 cut(s) | 3549 |
| BseCI | ATCGAT | 2 cut(s) | 480, 3457 |
| BseDI | CCNNGG | 9 cut(s) | 158, 286, 1290, 1364, 2711, 3167, 3192, 3299, 3698 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 1799, 2063, 2333, 3063, 3705, 4031, 4243, 4637 |
| BseMI | GCAATG | 5 cut(s) | 543, 1345, 1810, 2967, 3509 |
| BseMII | CTCAG | 6 cut(s) | 59, 123, 938, 1151, 1806, 4203 |
| BseRI | GAGGAG | 5 cut(s) | 412, 467, 945, 948, 1953 |
| BseSI | GKGCMC | 1 cut(s) | 4092 |
| BseXI | GCAGC | 7 cut(s) | 827, 869, 1552, 2931, 2987, 3607, 4213 |
| BseYI | CCCAGC | 2 cut(s) | 2648, 3815 |
| BsgI | GTGCAG | 2 cut(s) | 1395, 3423 |
| Bsh1236I | CGCG | 2 cut(s) | 1061, 2425 |
| BshNI | GGYRCC | 1 cut(s) | 4087 |
| BshTI | ACCGGT | 1 cut(s) | 3734 |
| BshVI | ATCGAT | 2 cut(s) | 480, 3457 |
| BsiHKAI | GWGCWC | 3 cut(s) | 467, 2407, 4658 |
| BsiHKCI | CYCGRG | 1 cut(s) | 4057 |
| BsiSI | CCGG | 5 cut(s) | 321, 1028, 3550, 3735, 4363 |
| BsiWI | CGTACG | 1 cut(s) | 241 |
| BslFI | GGGAC | 1 cut(s) | 2728 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 1799, 2063, 2333, 3063, 3705, 4031, 4243, 4637 |
| BsmAI | GTCTC | 5 cut(s) | 1404, 3033, 3564, 3684, 3985 |
| BsmFI | GGGAC | 1 cut(s) | 2728 |
| BsmI | GAATGC | 3 cut(s) | 1238, 1839, 2947 |
| Bso31I | GGTCTC | 1 cut(s) | 3684 |
| BsoBI | CYCGRG | 1 cut(s) | 4057 |
| Bsp119I | TTCGAA | 2 cut(s) | 1893, 2398 |
| Bsp1286I | GDGCHC | 4 cut(s) | 467, 2407, 4092, 4658 |
| Bsp13I | TCCGGA | 1 cut(s) | 3549 |
| Bsp1407I | TGTACA | 2 cut(s) | 1418, 3997 |
| Bsp19I | CCATGG | 1 cut(s) | 286 |
| Bsp68I | TCGCGA | 1 cut(s) | 2425 |
| BspCNI | CTCAG | 6 cut(s) | 58, 122, 939, 1152, 1807, 4204 |
| BspDI | ATCGAT | 2 cut(s) | 480, 3457 |
| BspEI | TCCGGA | 1 cut(s) | 3549 |
| BspFNI | CGCG | 2 cut(s) | 1061, 2425 |
| BspHI | TCATGA | 1 cut(s) | 39 |
| BspMAI | CTGCAG | 1 cut(s) | 3625 |
| BspMI | ACCTGC | 2 cut(s) | 2328, 3604 |
| BspQI | GCTCTTC | 3 cut(s) | 926, 3438, 4008 |
| BspT104I | TTCGAA | 2 cut(s) | 1893, 2398 |
| BspT107I | GGYRCC | 1 cut(s) | 4087 |
| BspTI | CTTAAG | 1 cut(s) | 3911 |
| BspTNI | GGTCTC | 1 cut(s) | 3684 |
| BsrDI | GCAATG | 5 cut(s) | 543, 1345, 1810, 2967, 3509 |
| BsrFI | RCCGGY | 2 cut(s) | 3734, 4362 |
| BsrGI | TGTACA | 2 cut(s) | 1418, 3997 |
| BssAI | RCCGGY | 2 cut(s) | 3734, 4362 |
| BssECI | CCNNGG | 9 cut(s) | 158, 286, 1290, 1364, 2711, 3167, 3192, 3299, 3698 |
| BssNAI | GTATAC | 2 cut(s) | 1475, 4565 |
| BssNI | GRCGYC | 1 cut(s) | 3249 |
| BssSI | CACGAG | 2 cut(s) | 2406, 3483 |
| BssT1I | CCWWGG | 5 cut(s) | 158, 286, 1290, 1364, 3299 |
| Bst1107I | GTATAC | 2 cut(s) | 1475, 4565 |
| Bst2BI | CACGAG | 2 cut(s) | 2406, 3483 |
| Bst6I | CTCTTC | 6 cut(s) | 92, 570, 926, 3438, 4008, 4632 |
| BstACI | GRCGYC | 1 cut(s) | 3249 |
| BstAFI | CTTAAG | 1 cut(s) | 3911 |
| BstAUI | TGTACA | 2 cut(s) | 1418, 3997 |
| BstBI | TTCGAA | 2 cut(s) | 1893, 2398 |
| BstDSI | CCRYGG | 2 cut(s) | 286, 3192 |
| BstFNI | CGCG | 2 cut(s) | 1061, 2425 |
| BstH2I | RGCGCY | 1 cut(s) | 208 |
| BstHHI | GCGC | 3 cut(s) | 207, 2198, 3363 |
| BstMAI | GTCTC | 5 cut(s) | 1404, 3033, 3564, 3684, 3985 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 653, 1562, 3187, 3196, 3437, 3532 |
| BstNSI | RCATGY | 4 cut(s) | 894, 1535, 3855, 3866 |
| BstSFI | CTRYAG | 1 cut(s) | 3621 |
| BstSLI | GKGCMC | 1 cut(s) | 4092 |
| BstUI | CGCG | 2 cut(s) | 1061, 2425 |
| BstV1I | GCAGC | 7 cut(s) | 827, 869, 1552, 2931, 2987, 3607, 4213 |
| BstV2I | GAAGAC | 3 cut(s) | 893, 1051, 3038 |
| BstX2I | RGATCY | 4 cut(s) | 229, 879, 2996, 4204 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 2120, 2903, 3306, 4382 |
| BstYI | RGATCY | 4 cut(s) | 229, 879, 2996, 4204 |
| BstZ17I | GTATAC | 2 cut(s) | 1475, 4565 |
| Bsu15I | ATCGAT | 2 cut(s) | 480, 3457 |
| BsuTUI | ATCGAT | 2 cut(s) | 480, 3457 |
| BtgI | CCRYGG | 2 cut(s) | 286, 3192 |
| BtgZI | GCGATG | 2 cut(s) | 2940, 3171 |
| BtsI | GCAGTG | 3 cut(s) | 1980, 2363, 2471 |
| BtuMI | TCGCGA | 1 cut(s) | 2425 |
| BveI | ACCTGC | 2 cut(s) | 2328, 3604 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1448 |
| CciI | TCATGA | 1 cut(s) | 39 |
| CfoI | GCGC | 3 cut(s) | 207, 2198, 3363 |
| Cfr10I | RCCGGY | 2 cut(s) | 3734, 4362 |
| ClaI | ATCGAT | 2 cut(s) | 480, 3457 |
| CseI | GACGC | 1 cut(s) | 3257 |
| CspAI | ACCGGT | 1 cut(s) | 3734 |
| EaeI | YGGCCR | 7 cut(s) | 283, 375, 759, 3065, 3179, 3412, 4360 |
| Eam1104I | CTCTTC | 6 cut(s) | 92, 570, 926, 3438, 4008, 4632 |
| EarI | CTCTTC | 6 cut(s) | 92, 570, 926, 3438, 4008, 4632 |
| Eco130I | CCWWGG | 5 cut(s) | 158, 286, 1290, 1364, 3299 |
| Eco31I | GGTCTC | 1 cut(s) | 3684 |
| Eco32I | GATATC | 3 cut(s) | 478, 1107, 2616 |
| Eco47I | GGWCC | 8 cut(s) | 49, 162, 247, 271, 2110, 2557, 3702, 3763 |
| Eco57I | CTGAAG | 6 cut(s) | 905, 1070, 1704, 3396, 3842, 4325 |
| Eco88I | CYCGRG | 1 cut(s) | 4057 |
| EcoO109I | RGGNCCY | 4 cut(s) | 162, 247, 3214, 4662 |
| EcoRI | GAATTC | 1 cut(s) | 1618 |
| EcoRV | GATATC | 3 cut(s) | 478, 1107, 2616 |
| EcoT14I | CCWWGG | 5 cut(s) | 158, 286, 1290, 1364, 3299 |
| ErhI | CCWWGG | 5 cut(s) | 158, 286, 1290, 1364, 3299 |
| FaqI | GGGAC | 1 cut(s) | 2728 |
| FauI | CCCGC | 6 cut(s) | 895, 1054, 1978, 2239, 2763, 3660 |
| FauNDI | CATATG | 1 cut(s) | 2581 |
| FbaI | TGATCA | 2 cut(s) | 2704, 3487 |
| FblI | GTMKAC | 6 cut(s) | 413, 792, 1474, 2655, 3778, 4564 |
| FseI | GGCCGGCC | 1 cut(s) | 4366 |
| FspI | TGCGCA | 1 cut(s) | 3362 |
| GlaI | GCGC | 3 cut(s) | 206, 2197, 3362 |
| GsaI | CCCAGC | 2 cut(s) | 2652, 3819 |
| GsuI | CTGGAG | 3 cut(s) | 413, 2373, 3668 |
| HaeII | RGCGCY | 1 cut(s) | 208 |
| HapII | CCGG | 5 cut(s) | 321, 1028, 3550, 3735, 4363 |
| HgaI | GACGC | 1 cut(s) | 3257 |
| HhaI | GCGC | 3 cut(s) | 207, 2198, 3363 |
| Hin1I | GRCGYC | 1 cut(s) | 3249 |
| Hin6I | GCGC | 3 cut(s) | 205, 2196, 3361 |
| HinP1I | GCGC | 3 cut(s) | 205, 2196, 3361 |
| HincII | GTYRAC | 2 cut(s) | 414, 2215 |
| HindII | GTYRAC | 2 cut(s) | 414, 2215 |
| HindIII | AAGCTT | 1 cut(s) | 1659 |
| HpaI | GTTAAC | 1 cut(s) | 2215 |
| HpaII | CCGG | 5 cut(s) | 321, 1028, 3550, 3735, 4363 |
| Hpy99I | CGWCG | 1 cut(s) | 1516 |
| HpyCH4IV | ACGT | 2 cut(s) | 991, 4333 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 653, 1562, 3187, 3196, 3437, 3532 |
| HpySE526I | ACGT | 2 cut(s) | 991, 4333 |
| Hsp92I | GRCGYC | 1 cut(s) | 3249 |
| HspAI | GCGC | 3 cut(s) | 205, 2196, 3361 |
| Kpn2I | TCCGGA | 1 cut(s) | 3549 |
| KroI | GCCGGC | 1 cut(s) | 4362 |
| KroNI | GCCGGC | 1 cut(s) | 4364 |
| Ksp22I | TGATCA | 2 cut(s) | 2704, 3487 |
| KspAI | GTTAAC | 1 cut(s) | 2215 |
| LguI | GCTCTTC | 3 cut(s) | 926, 3438, 4008 |
| LmnI | GCTCC | 2 cut(s) | 3335, 4386 |
| Lsp1109I | GCAGC | 7 cut(s) | 827, 869, 1552, 2931, 2987, 3607, 4213 |
| LweI | GCATC | 7 cut(s) | 802, 974, 1816, 2257, 3561, 4105, 4639 |
| MaeII | ACGT | 2 cut(s) | 991, 4333 |
| MaeIII | GTNAC | 8 cut(s) | 487, 581, 1115, 1763, 1774, 3245, 3670, 3741 |
| MflI | RGATCY | 4 cut(s) | 229, 879, 2996, 4204 |
| MhlI | GDGCHC | 4 cut(s) | 467, 2407, 4092, 4658 |
| MlyI | GAGTC | 9 cut(s) | 37, 56, 389, 409, 419, 1463, 2350, 3035, 4173 |
| MmeI | TCCRAC | 4 cut(s) | 645, 3296, 3773, 4556 |
| MroI | TCCGGA | 1 cut(s) | 3549 |
| MroNI | GCCGGC | 1 cut(s) | 4362 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1048, 2097, 4256 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1241, 1772, 2133, 2253, 3501, 4049, 4515 |
| MspA1I | CMGCKG | 2 cut(s) | 746, 4226 |
| MspCI | CTTAAG | 1 cut(s) | 3911 |
| MspI | CCGG | 5 cut(s) | 321, 1028, 3550, 3735, 4363 |
| Mva1269I | GAATGC | 3 cut(s) | 1238, 1839, 2947 |
| MvnI | CGCG | 2 cut(s) | 1061, 2425 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 653, 1562, 3187, 3196, 3437, 3532 |
| NaeI | GCCGGC | 1 cut(s) | 4364 |
| NciI | CCSGG | 1 cut(s) | 1028 |
| NcoI | CCATGG | 1 cut(s) | 286 |
| NdeI | CATATG | 1 cut(s) | 2581 |
| NgoMIV | GCCGGC | 1 cut(s) | 4362 |
| NmeAIII | GCCGAG | 2 cut(s) | 243, 403 |
| NmuCI | GTSAC | 4 cut(s) | 581, 1774, 3245, 3741 |
| NruI | TCGCGA | 1 cut(s) | 2425 |
| NsbI | TGCGCA | 1 cut(s) | 3362 |
| NspI | RCATGY | 4 cut(s) | 894, 1535, 3855, 3866 |
| NspV | TTCGAA | 2 cut(s) | 1893, 2398 |
| OliI | CACNNNNGTG | 1 cut(s) | 4049 |
| PaeI | GCATGC | 1 cut(s) | 3866 |
| PaeR7I | CTCGAG | 1 cut(s) | 4057 |
| PagI | TCATGA | 1 cut(s) | 39 |
| PaqCI | CACCTGC | 2 cut(s) | 2328, 3604 |
| PciI | ACATGT | 1 cut(s) | 890 |
| PciSI | GCTCTTC | 3 cut(s) | 926, 3438, 4008 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2404, 4441 |
| PctI | GAATGC | 3 cut(s) | 1238, 1839, 2947 |
| PdiI | GCCGGC | 1 cut(s) | 4364 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1048, 2097, 4256 |
| Pfl23II | CGTACG | 1 cut(s) | 241 |
| PfoI | TCCNGGA | 1 cut(s) | 3704 |
| PinAI | ACCGGT | 1 cut(s) | 3734 |
| PleI | GAGTC | 9 cut(s) | 37, 56, 388, 409, 418, 1462, 2350, 3035, 4173 |
| PpsI | GAGTC | 9 cut(s) | 37, 56, 388, 409, 418, 1462, 2350, 3035, 4173 |
| PpuMI | RGGWCCY | 2 cut(s) | 162, 247 |
| PscI | ACATGT | 1 cut(s) | 890 |
| PshBI | ATTAAT | 1 cut(s) | 2508 |
| PsiI | TTATAA | 1 cut(s) | 3944 |
| Psp5II | RGGWCCY | 2 cut(s) | 162, 247 |
| PspFI | CCCAGC | 2 cut(s) | 2648, 3815 |
| PspLI | CGTACG | 1 cut(s) | 241 |
| PspPPI | RGGWCCY | 2 cut(s) | 162, 247 |
| PspXI | VCTCGAGB | 1 cut(s) | 4057 |
| PstI | CTGCAG | 1 cut(s) | 3625 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1448 |
| PsuI | RGATCY | 4 cut(s) | 229, 879, 2996, 4204 |
| PvuII | CAGCTG | 1 cut(s) | 4226 |
| RigI | GGCCGGCC | 1 cut(s) | 4366 |
| RruI | TCGCGA | 1 cut(s) | 2425 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1241, 1772, 2133, 2253, 3501, 4049, 4515 |
| SalI | GTCGAC | 1 cut(s) | 412 |
| SapI | GCTCTTC | 3 cut(s) | 926, 3438, 4008 |
| ScaI | AGTACT | 2 cut(s) | 1921, 2669 |
| SchI | GAGTC | 9 cut(s) | 37, 56, 389, 409, 419, 1463, 2350, 3035, 4173 |
| SduI | GDGCHC | 4 cut(s) | 467, 2407, 4092, 4658 |
| SfaNI | GCATC | 7 cut(s) | 802, 974, 1816, 2257, 3561, 4105, 4639 |
| SfcI | CTRYAG | 1 cut(s) | 3621 |
| Sfr274I | CTCGAG | 1 cut(s) | 4057 |
| SfuI | TTCGAA | 2 cut(s) | 1893, 2398 |
| SinI | GGWCC | 8 cut(s) | 49, 162, 247, 271, 2110, 2557, 3702, 3763 |
| SlaI | CTCGAG | 1 cut(s) | 4057 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1241, 1772, 2133, 2253, 3501, 4049, 4515 |
| SmlI | CTYRAG | 6 cut(s) | 875, 1403, 3911, 4057, 4300, 4657 |
| SmoI | CTYRAG | 6 cut(s) | 875, 1403, 3911, 4057, 4300, 4657 |
| SphI | GCATGC | 1 cut(s) | 3866 |
| SspI | AATATT | 1 cut(s) | 3406 |
| StyI | CCWWGG | 5 cut(s) | 158, 286, 1290, 1364, 3299 |
| TaiI | ACGT | 2 cut(s) | 994, 4336 |
| TaqII | GACCGA | 2 cut(s) | 2256, 3270 |
| TatI | WGTACW | 6 cut(s) | 1418, 1919, 2667, 2688, 2828, 3997 |
| TauI | GCSGC | 3 cut(s) | 761, 3181, 3869 |
| TseFI | GTSAC | 4 cut(s) | 581, 1774, 3245, 3741 |
| TseI | GCWGC | 7 cut(s) | 815, 857, 1565, 2944, 2975, 3620, 4226 |
| Tsp45I | GTSAC | 4 cut(s) | 581, 1774, 3245, 3741 |
| TspGWI | ACGGA | 4 cut(s) | 263, 2091, 2570, 4550 |
| Vha464I | CTTAAG | 1 cut(s) | 3911 |
| VpaK11BI | GGWCC | 8 cut(s) | 49, 162, 247, 271, 2110, 2557, 3702, 3763 |
| VspI | ATTAAT | 1 cut(s) | 2508 |
| XbaI | TCTAGA | 1 cut(s) | 1865 |
| XceI | RCATGY | 4 cut(s) | 894, 1535, 3855, 3866 |
| XhoI | CTCGAG | 1 cut(s) | 4057 |
| XmaJI | CCTAGG | 2 cut(s) | 158, 1364 |
| XmiI | GTMKAC | 6 cut(s) | 413, 792, 1474, 2655, 3778, 4564 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1048, 2097, 4256 |
| ZrmI | AGTACT | 2 cut(s) | 1921, 2669 |