Nucleotidyltransferase domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G00060 AT4G00060 AT4G00060 AT4G00060 |
| fragaria_vesca | FvH4_7g11041 FvH4_7g11041 FvH4_7g11041 FvH4_7g11041 |
| malus_domestica | MD07G1115100.v1.1 |
| prunus_persica | Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 Prupe.2G137200_v2.0.a1 |
| pyrus_communis | pycom07g10010 |
| rosa_chinensis | RchiOBHm_Chr1g0349071 |
| rosa_laevigata | RLG00000028609 |
| rosa_multiflora | Rmu_sc0009855.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00306210 |
| rosa_rugosa | Rorug01G0199800 |
| rosa_samantha | Rh1AG217400 Rh1BG182800 Rh1CG201800 Rh1DG212800 |
| rosa_wichuraiana | Rw1G018480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1674, 2934, 4199 |
| Acc16I | TGCGCA | 2 cut(s) | 1217, 2827 |
| Acc36I | ACCTGC | 1 cut(s) | 1300 |
| AccB1I | GGYRCC | 2 cut(s) | 183, 4273 |
| AccI | GTMKAC | 1 cut(s) | 653 |
| AccII | CGCG | 4 cut(s) | 986, 1063, 3417, 3471 |
| AccIII | TCCGGA | 1 cut(s) | 3754 |
| AclI | AACGTT | 1 cut(s) | 2265 |
| AcoI | YGGCCR | 6 cut(s) | 987, 2459, 2511, 3338, 3437, 3644 |
| AcuI | CTGAAG | 7 cut(s) | 1065, 1145, 1316, 2226, 3654, 3758, 4097 |
| AcvI | CACGTG | 1 cut(s) | 3740 |
| AfeI | AGCGCT | 1 cut(s) | 75 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 520, 907, 1610, 3336, 3960, 4498, 4948 |
| AflII | CTTAAG | 1 cut(s) | 4166 |
| AgeI | ACCGGT | 3 cut(s) | 142, 180, 900 |
| AhlI | ACTAGT | 2 cut(s) | 2860, 4007 |
| AjnI | CCWGG | 6 cut(s) | 1609, 3205, 3939, 3959, 4124, 4988 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3523, 3555, 4499, 4531 |
| AleI | CACNNNNGTG | 2 cut(s) | 34, 4314 |
| Alw21I | GWGCWC | 2 cut(s) | 2683, 4311 |
| Alw26I | GTCTC | 9 cut(s) | 230, 251, 2244, 2734, 3234, 3357, 3894, 3939, 4097 |
| Alw44I | GTGCAC | 1 cut(s) | 4307 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2127, 2204, 2249 |
| Ama87I | CYCGRG | 1 cut(s) | 3508 |
| Aor13HI | TCCGGA | 1 cut(s) | 3754 |
| Aor51HI | AGCGCT | 1 cut(s) | 75 |
| ApaLI | GTGCAC | 1 cut(s) | 4307 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1235, 1267, 3980, 4012 |
| AsiGI | ACCGGT | 3 cut(s) | 142, 180, 900 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1391, 2376, 4511 |
| AspA2I | CCTAGG | 2 cut(s) | 398, 3425 |
| AspLEI | GCGC | 7 cut(s) | 76, 986, 1218, 2828, 3375, 3417, 3473 |
| AsuC2I | CCSGG | 2 cut(s) | 2986, 5015 |
| AsuII | TTCGAA | 2 cut(s) | 938, 2674 |
| AvaI | CYCGRG | 1 cut(s) | 3508 |
| AvaII | GGWCC | 9 cut(s) | 240, 402, 591, 1578, 2057, 2389, 2703, 4018, 4986 |
| AvrII | CCTAGG | 2 cut(s) | 398, 3425 |
| AxyI | CCTNAGG | 1 cut(s) | 2250 |
| BaeGI | GKGCMC | 3 cut(s) | 188, 4311, 4355 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4811, 4844 |
| BalI | TGGCCA | 1 cut(s) | 3646 |
| BanI | GGYRCC | 2 cut(s) | 183, 4273 |
| BanII | GRGCYC | 1 cut(s) | 2428 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3600, 3632 |
| BbrPI | CACGTG | 1 cut(s) | 3740 |
| BbsI | GAAGAC | 3 cut(s) | 822, 3311, 4233 |
| Bbv12I | GWGCWC | 2 cut(s) | 2683, 4311 |
| BccI | CCATC | 8 cut(s) | 416, 634, 2216, 2280, 3499, 3584, 3620, 4429 |
| BceAI | ACGGC | 4 cut(s) | 449, 544, 1545, 2725 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4183, 4217 |
| BciT130I | CCWGG | 6 cut(s) | 1611, 3207, 3941, 3961, 4126, 4990 |
| BciVI | GTATCC | 1 cut(s) | 4812 |
| BclI | TGATCA | 3 cut(s) | 1954, 2977, 3742 |
| BcnI | CCSGG | 2 cut(s) | 2986, 5015 |
| BcoDI | GTCTC | 9 cut(s) | 230, 251, 2244, 2734, 3234, 3357, 3894, 3939, 4097 |
| BcuI | ACTAGT | 2 cut(s) | 2860, 4007 |
| BfmI | CTRYAG | 4 cut(s) | 2466, 3876, 5073, 5086 |
| BfoI | RGCGCY | 1 cut(s) | 77 |
| BfrI | CTTAAG | 1 cut(s) | 4166 |
| BfuAI | ACCTGC | 1 cut(s) | 1300 |
| BfuI | GTATCC | 1 cut(s) | 4812 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 995 |
| BlnI | CCTAGG | 2 cut(s) | 398, 3425 |
| BmcAI | AGTACT | 1 cut(s) | 4285 |
| Bme1390I | CCNGG | 8 cut(s) | 1611, 2986, 3207, 3941, 3961, 4126, 4990, 5015 |
| Bme18I | GGWCC | 9 cut(s) | 240, 402, 591, 1578, 2057, 2389, 2703, 4018, 4986 |
| BmeT110I | CYCGRG | 1 cut(s) | 3508 |
| BmrFI | CCNGG | 8 cut(s) | 1611, 2986, 3207, 3941, 3961, 4126, 4990, 5015 |
| BmrI | ACTGGG | 2 cut(s) | 3574, 4956 |
| BmsI | GCATC | 9 cut(s) | 1045, 1297, 2065, 2536, 3229, 3816, 4360, 4888, 4910 |
| BmuI | ACTGGG | 2 cut(s) | 3574, 4956 |
| BpiI | GAAGAC | 3 cut(s) | 822, 3311, 4233 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1443, 1475 |
| BpmI | CTGGAG | 5 cut(s) | 98, 2226, 3923, 4297, 4580 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1300, 1650 |
| Bpu14I | TTCGAA | 2 cut(s) | 938, 2674 |
| BpuEI | CTTGAG | 2 cut(s) | 1879, 4576 |
| BpuMI | CCSGG | 2 cut(s) | 2986, 5015 |
| Bsa29I | ATCGAT | 1 cut(s) | 2521 |
| BsaAI | YACGTR | 1 cut(s) | 3740 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2934 |
| BsaI | GGTCTC | 2 cut(s) | 251, 3939 |
| BsaJI | CCNNGG | 8 cut(s) | 398, 526, 1610, 2793, 3425, 3557, 4173, 4688 |
| BsaWI | WCCGGW | 6 cut(s) | 142, 180, 242, 900, 2700, 3754 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 520, 907, 1610, 3336, 3960, 4498, 4948 |
| Bse118I | RCCGGY | 7 cut(s) | 142, 180, 900, 989, 2461, 2509, 3448 |
| Bse21I | CCTNAGG | 1 cut(s) | 2250 |
| Bse3DI | GCAATG | 4 cut(s) | 1075, 2639, 3317, 5020 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2934 |
| BseAI | TCCGGA | 1 cut(s) | 3754 |
| BseBI | CCWGG | 6 cut(s) | 1611, 3207, 3941, 3961, 4126, 4990 |
| BseCI | ATCGAT | 1 cut(s) | 2521 |
| BseDI | CCNNGG | 8 cut(s) | 398, 526, 1610, 2793, 3425, 3557, 4173, 4688 |
| BseJI | GATNNNNATC | 1 cut(s) | 2934 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 520, 907, 1610, 3336, 3960, 4498, 4948 |
| BseMI | GCAATG | 4 cut(s) | 1075, 2639, 3317, 5020 |
| BseMII | CTCAG | 9 cut(s) | 153, 323, 387, 797, 908, 2241, 2883, 3774, 4458 |
| BseRI | GAGGAG | 4 cut(s) | 479, 482, 707, 1876 |
| BseSI | GKGCMC | 3 cut(s) | 188, 4311, 4355 |
| BseX3I | CGGCCG | 1 cut(s) | 987 |
| BseYI | CCCAGC | 2 cut(s) | 1270, 4070 |
| BsgI | GTGCAG | 3 cut(s) | 1465, 1823, 3678 |
| Bsh1236I | CGCG | 4 cut(s) | 986, 1063, 3417, 3471 |
| Bsh1285I | CGRYCG | 3 cut(s) | 990, 2521, 3421 |
| BshNI | GGYRCC | 2 cut(s) | 183, 4273 |
| BshTI | ACCGGT | 3 cut(s) | 142, 180, 900 |
| BshVI | ATCGAT | 1 cut(s) | 2521 |
| BsiEI | CGRYCG | 3 cut(s) | 990, 2521, 3421 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2683, 4311 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3508 |
| BslFI | GGGAC | 5 cut(s) | 1564, 3001, 3449, 3982, 4896 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 520, 907, 1610, 3336, 3960, 4498, 4948 |
| BsmAI | GTCTC | 9 cut(s) | 230, 251, 2244, 2734, 3234, 3357, 3894, 3939, 4097 |
| BsmBI | CGTCTC | 1 cut(s) | 230 |
| BsmFI | GGGAC | 5 cut(s) | 1564, 3001, 3449, 3982, 4896 |
| BsmI | GAATGC | 2 cut(s) | 119, 2088 |
| Bso31I | GGTCTC | 2 cut(s) | 251, 3939 |
| BsoBI | CYCGRG | 1 cut(s) | 3508 |
| Bsp119I | TTCGAA | 2 cut(s) | 938, 2674 |
| Bsp1286I | GDGCHC | 5 cut(s) | 188, 2428, 2683, 4311, 4355 |
| Bsp13I | TCCGGA | 1 cut(s) | 3754 |
| Bsp1407I | TGTACA | 1 cut(s) | 1619 |
| Bsp19I | CCATGG | 1 cut(s) | 2793 |
| BspCNI | CTCAG | 9 cut(s) | 154, 322, 386, 798, 909, 2242, 2884, 3775, 4459 |
| BspDI | ATCGAT | 1 cut(s) | 2521 |
| BspEI | TCCGGA | 1 cut(s) | 3754 |
| BspFNI | CGCG | 4 cut(s) | 986, 1063, 3417, 3471 |
| BspHI | TCATGA | 1 cut(s) | 1114 |
| BspMAI | CTGCAG | 1 cut(s) | 5090 |
| BspMI | ACCTGC | 1 cut(s) | 1300 |
| BspQI | GCTCTTC | 1 cut(s) | 164 |
| BspT104I | TTCGAA | 2 cut(s) | 938, 2674 |
| BspT107I | GGYRCC | 2 cut(s) | 183, 4273 |
| BspTI | CTTAAG | 1 cut(s) | 4166 |
| BspTNI | GGTCTC | 2 cut(s) | 251, 3939 |
| BsrDI | GCAATG | 4 cut(s) | 1075, 2639, 3317, 5020 |
| BsrFI | RCCGGY | 7 cut(s) | 142, 180, 900, 989, 2461, 2509, 3448 |
| BsrGI | TGTACA | 1 cut(s) | 1619 |
| BssAI | RCCGGY | 7 cut(s) | 142, 180, 900, 989, 2461, 2509, 3448 |
| BssECI | CCNNGG | 8 cut(s) | 398, 526, 1610, 2793, 3425, 3557, 4173, 4688 |
| BssT1I | CCWWGG | 4 cut(s) | 398, 2793, 3425, 3557 |
| Bst2UI | CCWGG | 6 cut(s) | 1611, 3207, 3941, 3961, 4126, 4990 |
| Bst6I | CTCTTC | 5 cut(s) | 164, 430, 3693, 4263, 4887 |
| BstAFI | CTTAAG | 1 cut(s) | 4166 |
| BstAUI | TGTACA | 1 cut(s) | 1619 |
| BstBAI | YACGTR | 1 cut(s) | 3740 |
| BstBI | TTCGAA | 2 cut(s) | 938, 2674 |
| BstDSI | CCRYGG | 3 cut(s) | 526, 2793, 4173 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1608 |
| BstFNI | CGCG | 4 cut(s) | 986, 1063, 3417, 3471 |
| BstH2I | RGCGCY | 1 cut(s) | 77 |
| BstHHI | GCGC | 7 cut(s) | 76, 986, 1218, 2828, 3375, 3417, 3473 |
| BstMAI | GTCTC | 9 cut(s) | 230, 251, 2244, 2734, 3234, 3357, 3894, 3939, 4097 |
| BstMCI | CGRYCG | 3 cut(s) | 990, 2521, 3421 |
| BstNI | CCWGG | 6 cut(s) | 1611, 3207, 3941, 3961, 4126, 4990 |
| BstNSI | RCATGY | 3 cut(s) | 1778, 4110, 4121 |
| BstSCI | CCNGG | 8 cut(s) | 1609, 2984, 3205, 3939, 3959, 4124, 4988, 5013 |
| BstSFI | CTRYAG | 4 cut(s) | 2466, 3876, 5073, 5086 |
| BstSLI | GKGCMC | 3 cut(s) | 188, 4311, 4355 |
| BstUI | CGCG | 4 cut(s) | 986, 1063, 3417, 3471 |
| BstV2I | GAAGAC | 3 cut(s) | 822, 3311, 4233 |
| BstX2I | RGATCY | 3 cut(s) | 1654, 3269, 3956 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 2399, 3176, 3564, 4637 |
| BstYI | RGATCY | 3 cut(s) | 1654, 3269, 3956 |
| BstZI | CGGCCG | 1 cut(s) | 987 |
| Bsu15I | ATCGAT | 1 cut(s) | 2521 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2250 |
| BsuI | GTATCC | 1 cut(s) | 4812 |
| BsuTUI | ATCGAT | 1 cut(s) | 2521 |
| BtgI | CCRYGG | 3 cut(s) | 526, 2793, 4173 |
| BveI | ACCTGC | 1 cut(s) | 1300 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2127, 2204, 2249 |
| CciI | TCATGA | 1 cut(s) | 1114 |
| CfoI | GCGC | 7 cut(s) | 76, 986, 1218, 2828, 3375, 3417, 3473 |
| Cfr10I | RCCGGY | 7 cut(s) | 142, 180, 900, 989, 2461, 2509, 3448 |
| ClaI | ATCGAT | 1 cut(s) | 2521 |
| CseI | GACGC | 4 cut(s) | 1069, 1717, 1949, 4812 |
| CspAI | ACCGGT | 3 cut(s) | 142, 180, 900 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1218, 1253 |
| DraI | TTTAAA | 1 cut(s) | 2160 |
| EaeI | YGGCCR | 6 cut(s) | 987, 2459, 2511, 3338, 3437, 3644 |
| EagI | CGGCCG | 1 cut(s) | 987 |
| Eam1104I | CTCTTC | 5 cut(s) | 164, 430, 3693, 4263, 4887 |
| EarI | CTCTTC | 5 cut(s) | 164, 430, 3693, 4263, 4887 |
| EciI | GGCGGA | 2 cut(s) | 473, 4535 |
| EclXI | CGGCCG | 1 cut(s) | 987 |
| Eco130I | CCWWGG | 4 cut(s) | 398, 2793, 3425, 3557 |
| Eco24I | GRGCYC | 1 cut(s) | 2428 |
| Eco31I | GGTCTC | 2 cut(s) | 251, 3939 |
| Eco32I | GATATC | 3 cut(s) | 1339, 1353, 2889 |
| Eco47I | GGWCC | 9 cut(s) | 240, 402, 591, 1578, 2057, 2389, 2703, 4018, 4986 |
| Eco47III | AGCGCT | 1 cut(s) | 75 |
| Eco52I | CGGCCG | 1 cut(s) | 987 |
| Eco57I | CTGAAG | 7 cut(s) | 1065, 1145, 1316, 2226, 3654, 3758, 4097 |
| Eco72I | CACGTG | 1 cut(s) | 3740 |
| Eco81I | CCTNAGG | 1 cut(s) | 2250 |
| Eco88I | CYCGRG | 1 cut(s) | 3508 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1608 |
| EcoO109I | RGGNCCY | 3 cut(s) | 402, 1578, 3668 |
| EcoRI | GAATTC | 1 cut(s) | 934 |
| EcoRII | CCWGG | 6 cut(s) | 1609, 3205, 3939, 3959, 4124, 4988 |
| EcoRV | GATATC | 3 cut(s) | 1339, 1353, 2889 |
| EcoT14I | CCWWGG | 4 cut(s) | 398, 2793, 3425, 3557 |
| EcoT22I | ATGCAT | 1 cut(s) | 4903 |
| EcoT38I | GRGCYC | 1 cut(s) | 2428 |
| ErhI | CCWWGG | 4 cut(s) | 398, 2793, 3425, 3557 |
| Esp3I | CGTCTC | 1 cut(s) | 230 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 158, 190 |
| FaqI | GGGAC | 5 cut(s) | 1564, 3001, 3449, 3982, 4896 |
| FauI | CCCGC | 2 cut(s) | 308, 590 |
| FauNDI | CATATG | 2 cut(s) | 2854, 5062 |
| FbaI | TGATCA | 3 cut(s) | 1954, 2977, 3742 |
| FblI | GTMKAC | 1 cut(s) | 653 |
| FriOI | GRGCYC | 1 cut(s) | 2428 |
| FspI | TGCGCA | 2 cut(s) | 1217, 2827 |
| GlaI | GCGC | 7 cut(s) | 75, 985, 1217, 2827, 3374, 3416, 3472 |
| GsaI | CCCAGC | 2 cut(s) | 1274, 4074 |
| GsuI | CTGGAG | 5 cut(s) | 98, 2226, 3923, 4297, 4580 |
| HaeII | RGCGCY | 1 cut(s) | 77 |
| HgaI | GACGC | 4 cut(s) | 1069, 1717, 1949, 4812 |
| HhaI | GCGC | 7 cut(s) | 76, 986, 1218, 2828, 3375, 3417, 3473 |
| Hin6I | GCGC | 7 cut(s) | 74, 984, 1216, 2826, 3373, 3415, 3471 |
| HinP1I | GCGC | 7 cut(s) | 74, 984, 1216, 2826, 3373, 3415, 3471 |
| HincII | GTYRAC | 2 cut(s) | 654, 2494 |
| HindII | GTYRAC | 2 cut(s) | 654, 2494 |
| HindIII | AAGCTT | 4 cut(s) | 885, 1905, 3609, 4848 |
| HpaI | GTTAAC | 1 cut(s) | 2494 |
| Hpy166II | GTNNAC | 9 cut(s) | 654, 1033, 2365, 2494, 2745, 3617, 4018, 4292, 4309 |
| Hpy8I | GTNNAC | 9 cut(s) | 654, 1033, 2365, 2494, 2745, 3617, 4018, 4292, 4309 |
| Hpy99I | CGWCG | 6 cut(s) | 37, 470, 673, 1063, 1711, 3448 |
| HpyCH4IV | ACGT | 3 cut(s) | 2265, 3282, 3739 |
| HpySE526I | ACGT | 3 cut(s) | 2265, 3282, 3739 |
| HspAI | GCGC | 7 cut(s) | 74, 984, 1216, 2826, 3373, 3415, 3471 |
| Kpn2I | TCCGGA | 1 cut(s) | 3754 |
| KroI | GCCGGC | 2 cut(s) | 989, 2461 |
| KroNI | GCCGGC | 2 cut(s) | 991, 2463 |
| Ksp22I | TGATCA | 3 cut(s) | 1954, 2977, 3742 |
| KspAI | GTTAAC | 1 cut(s) | 2494 |
| LguI | GCTCTTC | 1 cut(s) | 164 |
| LmnI | GCTCC | 9 cut(s) | 507, 516, 536, 1065, 1180, 2431, 2698, 3478, 3593 |
| LweI | GCATC | 9 cut(s) | 1045, 1297, 2065, 2536, 3229, 3816, 4360, 4888, 4910 |
| MaeII | ACGT | 3 cut(s) | 2265, 3282, 3739 |
| MfeI | CAATTG | 3 cut(s) | 2604, 3907, 4807 |
| MflI | RGATCY | 3 cut(s) | 1654, 3269, 3956 |
| MhlI | GDGCHC | 5 cut(s) | 188, 2428, 2683, 4311, 4355 |
| MlsI | TGGCCA | 1 cut(s) | 3646 |
| MluNI | TGGCCA | 1 cut(s) | 3646 |
| MlyI | GAGTC | 9 cut(s) | 320, 629, 638, 649, 659, 1706, 2626, 3500, 5088 |
| Mox20I | TGGCCA | 1 cut(s) | 3646 |
| Mph1103I | ATGCAT | 1 cut(s) | 4903 |
| MroI | TCCGGA | 1 cut(s) | 3754 |
| MroNI | GCCGGC | 2 cut(s) | 989, 2461 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1391, 2376, 4511 |
| MscI | TGGCCA | 1 cut(s) | 3646 |
| MslI | CAYNNNNRTG | 7 cut(s) | 34, 1175, 1346, 2532, 3756, 4314, 4770 |
| Msp20I | TGGCCA | 1 cut(s) | 3646 |
| MspA1I | CMGCKG | 2 cut(s) | 1811, 4450 |
| MspCI | CTTAAG | 1 cut(s) | 4166 |
| MspR9I | CCNGG | 8 cut(s) | 1611, 2986, 3207, 3941, 3961, 4126, 4990, 5015 |
| MunI | CAATTG | 3 cut(s) | 2604, 3907, 4807 |
| Mva1269I | GAATGC | 2 cut(s) | 119, 2088 |
| MvaI | CCWGG | 6 cut(s) | 1611, 3207, 3941, 3961, 4126, 4990 |
| MvnI | CGCG | 4 cut(s) | 986, 1063, 3417, 3471 |
| NaeI | GCCGGC | 2 cut(s) | 991, 2463 |
| NciI | CCSGG | 2 cut(s) | 2986, 5015 |
| NcoI | CCATGG | 1 cut(s) | 2793 |
| NdeI | CATATG | 2 cut(s) | 2854, 5062 |
| NgoMIV | GCCGGC | 2 cut(s) | 989, 2461 |
| NmeAIII | GCCGAG | 3 cut(s) | 643, 2579, 4669 |
| NmuCI | GTSAC | 5 cut(s) | 3, 727, 1075, 2873, 3503 |
| NsbI | TGCGCA | 2 cut(s) | 1217, 2827 |
| NsiI | ATGCAT | 1 cut(s) | 4903 |
| NspI | RCATGY | 3 cut(s) | 1778, 4110, 4121 |
| NspV | TTCGAA | 2 cut(s) | 938, 2674 |
| OliI | CACNNNNGTG | 2 cut(s) | 34, 4314 |
| PaeI | GCATGC | 1 cut(s) | 4121 |
| PaeR7I | CTCGAG | 1 cut(s) | 3508 |
| PagI | TCATGA | 1 cut(s) | 1114 |
| PciSI | GCTCTTC | 1 cut(s) | 164 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 41, 220, 2680, 3475, 4696 |
| PctI | GAATGC | 2 cut(s) | 119, 2088 |
| PdiI | GCCGGC | 2 cut(s) | 991, 2463 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1391, 2376, 4511 |
| PflFI | GACNNNGTC | 1 cut(s) | 31 |
| PfoI | TCCNGGA | 1 cut(s) | 3959 |
| PinAI | ACCGGT | 3 cut(s) | 142, 180, 900 |
| Ple19I | CGATCG | 2 cut(s) | 2521, 3421 |
| PleI | GAGTC | 9 cut(s) | 320, 628, 637, 649, 658, 1705, 2626, 3500, 5087 |
| PmaCI | CACGTG | 1 cut(s) | 3740 |
| PmlI | CACGTG | 1 cut(s) | 3740 |
| PpsI | GAGTC | 9 cut(s) | 320, 628, 637, 649, 658, 1705, 2626, 3500, 5087 |
| Ppu21I | YACGTR | 1 cut(s) | 3740 |
| PpuMI | RGGWCCY | 2 cut(s) | 402, 1578 |
| PsiI | TTATAA | 3 cut(s) | 1674, 2934, 4199 |
| Psp1406I | AACGTT | 1 cut(s) | 2265 |
| Psp5II | RGGWCCY | 2 cut(s) | 402, 1578 |
| Psp6I | CCWGG | 6 cut(s) | 1609, 3205, 3939, 3959, 4124, 4988 |
| PspCI | CACGTG | 1 cut(s) | 3740 |
| PspFI | CCCAGC | 2 cut(s) | 1270, 4070 |
| PspGI | CCWGG | 6 cut(s) | 1609, 3205, 3939, 3959, 4124, 4988 |
| PspPPI | RGGWCCY | 2 cut(s) | 402, 1578 |
| PspXI | VCTCGAGB | 1 cut(s) | 3508 |
| PstI | CTGCAG | 1 cut(s) | 5090 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2127, 2204, 2249 |
| PsuI | RGATCY | 3 cut(s) | 1654, 3269, 3956 |
| PsyI | GACNNNGTC | 1 cut(s) | 31 |
| PvuI | CGATCG | 2 cut(s) | 2521, 3421 |
| PvuII | CAGCTG | 2 cut(s) | 1811, 4450 |
| RseI | CAYNNNNRTG | 7 cut(s) | 34, 1175, 1346, 2532, 3756, 4314, 4770 |
| SalI | GTCGAC | 1 cut(s) | 652 |
| SapI | GCTCTTC | 1 cut(s) | 164 |
| ScaI | AGTACT | 1 cut(s) | 4285 |
| SchI | GAGTC | 9 cut(s) | 320, 629, 638, 649, 659, 1706, 2626, 3500, 5088 |
| ScrFI | CCNGG | 8 cut(s) | 1611, 2986, 3207, 3941, 3961, 4126, 4990, 5015 |
| SduI | GDGCHC | 5 cut(s) | 188, 2428, 2683, 4311, 4355 |
| SfaNI | GCATC | 9 cut(s) | 1045, 1297, 2065, 2536, 3229, 3816, 4360, 4888, 4910 |
| SfcI | CTRYAG | 4 cut(s) | 2466, 3876, 5073, 5086 |
| Sfr274I | CTCGAG | 1 cut(s) | 3508 |
| SfuI | TTCGAA | 2 cut(s) | 938, 2674 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3448 |
| SinI | GGWCC | 9 cut(s) | 240, 402, 591, 1578, 2057, 2389, 2703, 4018, 4986 |
| SlaI | CTCGAG | 1 cut(s) | 3508 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 34, 1175, 1346, 2532, 3756, 4314, 4770 |
| SmlI | CTYRAG | 4 cut(s) | 1858, 3508, 4166, 4555 |
| SmoI | CTYRAG | 4 cut(s) | 1858, 3508, 4166, 4555 |
| SpeI | ACTAGT | 2 cut(s) | 2860, 4007 |
| SphI | GCATGC | 1 cut(s) | 4121 |
| SspI | AATATT | 2 cut(s) | 104, 3661 |
| StyD4I | CCNGG | 8 cut(s) | 1609, 2984, 3205, 3939, 3959, 4124, 4988, 5013 |
| StyI | CCWWGG | 4 cut(s) | 398, 2793, 3425, 3557 |
| TaiI | ACGT | 3 cut(s) | 2268, 3285, 3742 |
| TatI | WGTACW | 6 cut(s) | 1619, 1661, 2744, 2961, 3101, 4283 |
| TauI | GCSGC | 4 cut(s) | 989, 3340, 3439, 3781 |
| TseFI | GTSAC | 5 cut(s) | 3, 727, 1075, 2873, 3503 |
| Tsp45I | GTSAC | 5 cut(s) | 3, 727, 1075, 2873, 3503 |
| TspGWI | ACGGA | 4 cut(s) | 212, 3084, 3820, 4696 |
| Tth111I | GACNNNGTC | 1 cut(s) | 31 |
| Vha464I | CTTAAG | 1 cut(s) | 4166 |
| VneI | GTGCAC | 1 cut(s) | 4307 |
| VpaK11BI | GGWCC | 9 cut(s) | 240, 402, 591, 1578, 2057, 2389, 2703, 4018, 4986 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1608 |
| XceI | RCATGY | 3 cut(s) | 1778, 4110, 4121 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1174 |
| XhoI | CTCGAG | 1 cut(s) | 3508 |
| XmaJI | CCTAGG | 2 cut(s) | 398, 3425 |
| XmiI | GTMKAC | 1 cut(s) | 653 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1391, 2376, 4511 |
| ZrmI | AGTACT | 1 cut(s) | 4285 |
| Zsp2I | ATGCAT | 1 cut(s) | 4903 |