Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0008961

Physical Location & Seq

Genomic Coordinates Forward (+)

17457044 .. 17463403

Gene Structure 6360 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1124600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3270 bp

ATGGATAATAATGGTGGTTCATCACCATACCCATACCCATATCAGAATTCCTATCCATACCCTCATCACCCTCATCCTAATCAATACCCTCCACCTCCGGATCAATACCCACCTGCCCCATATCCATACCCACCATACAATTCTCAGTATCCTTACCCGTACCCGTACCCTCCATCGCCTTCCTCACCGTCCCCCCATTCAGTTTCAGGCCCTTTAGATTACCAACCTCCCTATCCATATCCTTACCCCCCGGCTCGTCCGATTTCCCATAGTGGTCCTCTGCCTAGCATTCAGCAGCACAGCAGTTTCAATTATGGTTCACAGTACCCTTACCAACAACAGTCTGGGGCTTACCCACCTCCCGAAAGCCCCCATCATGTCCCTTTGCGCCCCAGTAGGTTCTCGAATCATCAGCGGCATGATAGCTGTCCCAATGGAATTGGGACGGGTTCATTTCATGAGAATGTTTCAGAACCTATGCCTCCTCACTCTTCTGCTTATCCGCCCTTGGATCAGCTTATGAGTAATGTGCATTTGTCTGAAAATCAATCACCTGAGCCCACAGCACCCCCATCACCTTCGGTGCCACACTTGACTCATTCAACTCCGAGTAGTGCAAGGTATGATAAGCAAGGGGAGCTCTATGCGTATCCTAATAACTCATTTTCAAGTAGTTGGGATACGTCTTATTCGGGTCAGATTGAATCAGCGGCTCATTCTTCTTATTCACATTCAAGCTCATTTAATGGGTCACAGCATAGCGGTAGTTTGCAGATTATTCCATTGCAGAATAAAGGGTCCTTGAAGGTTCTGCTTCTACATGGAAATTTAGACATTTGGGTATATGAAGCCAGAAACCTTCCAAATATGGACATGTTCCACAAGACTTTGGGGGATATGTTTTTGAAGTTACCAGGGAGTGCAAGTAGCAAAACCGATGGCCAATCGAGTCGTAAGATTACTAGTGATCCATATGTTTCAATCTCAGTTTCAAATGCTGTAGTTGGGAGGACATATGTGATAAGCAATTCTGAATTTCCTGTTTGGACGCAACATTTCAATGTTCCAGTAGCACATTACGCTGCTGAAGTGCACTTTGTTGTTAAAGATAGTGATCTTGTGGGGTCCCAGCTTATTGGGGTTGTGGCAATTCCAGTAGAACAGATATATACGGGAGCAAGAGTTGAGGGAATTTATCCAATCTTGAATTCGAGTGGGAAGCAATGTAAAGCCGGAGCTGTCCTAAGACTTTCAATTCAGTACATTCCAATTGAGCAATTGAGCGTTTACCATAATGGAGTTGGGGCAGGCCCTGATTATTTTGGGGTTCCTGGCACATATTTTCCTCTTAGGACAGGTGGAAAAGTAACTCTTTATCAAGATGCCCATGTCCCAGATGGGATGCTTCCAAACTTGATGTTAGATGGTGGGATGCCATATGTGCATGGGAAGTGTTGGCATGATATTTTTGATGCAATACGTCAGGCCCAGCGTTTAATTTACATTGCTGGTTGGTCAGTTTGGCAGAATGTTAGACTAGTTCGGGATGTTGGTGGTGCATCAAATTGCACCATAGGGGATCTTCTGAGGTCCAAGTCCCAAGAAGGAGTGAGAGTGCTGTTGCTTGTTTGGGATGACCCTACTTCAAGGAGCATTTTGGGTTATAAAACAGATGGAATCATGCAAACCCATGATGAAGAACTTCGCCGCTTTTTCAAGCATTCTTCAGTGCAAGTATTACTTTGCCCTCGCACTGCTGGAAAAAGACATAGCTGGGTCAAGCAAAGGGAAGTTGGAACGATCTATACACACCATCAGAAAACTGTAATAGTGGACGCTGATGCTGGCAATAATAGGAGGAAAATCATGGCCTTTGTTGGAGGACTTGATTTATGTGATGGTCGGTATGATACGCCGGATCACCCTATATTTAGGACATTACAAACAGTGCATAAAGATGACTATCACAATCCTACATACACGGGCAGCACTGCTGGTTGTCCAAGAGAACCATGGCATGACATGCACTCTAGACTTGATGGTCCAGCGGCATATGATGTACTGACCAACTTTGAAGAGCGCTGGTTAAAGGCTTCAAAACCACATGGGATGAAAAAACTAAAAAAAAGTGCATATGGTGATTCTTTGCTCAGGTTGGAAAGGATTCCAGACATAGTTGGAGCGTCCCATGCTGCTTCCACTAGTGACAACGATCCTGAAACTTGGCATGTTCAGATTTTCCGTTCAATTGACTCAAATTCTGTTAAAGGTTTCCCAAAGGATCCAAAAGAAGCAACAAGCAAGAACCTGGTGTGCGGAAAAAATGTGCTCATTGACATGAGCATACACACAGCATATGTGAAGGCAATCCGCGCTGCCCAGCATTTCATTTATATAGAGAATCAGTATTTCATTGGGTCCTCATACAATTGGAGTGCGCATAAAGACTTAGGTGCTAACAATTTGATCCCAATGGAAATTGCCCTTAAGATTGCTAGTAAAATCAGAGCAAATGAGAGATTTGCTGCATATATCATCATTCCAATGTGGCCAGAGGGTGTTCCAACGGGTGCAGCAACACAAAGAATTCTGTTTTGGCAGCACAAGACAATGCAAATGATGTACGAGACAATTTACAAGGCTTTAGTGGAAGTTGGGCTGGAGGGTGCATTCTCCCCCCAAGACTATTTAAACTTCTTCTGTCTTGGCAATCGTGAGGCCATAGATGGAAATGATACATCATTCTCTGGAAGTCCTACTGCAGCCAACACTCCTCAGGCGCTTAGTCAAAAGAGCAGGCGATTTATGATTTATGTTCATTCGAAAGGCATGATAATTGATGACGAGTATGTAATAGTGGGTTCGGCGAACATCAATCAGCGCTCTATGGAAGGGACAAGAGACACCGAAATTGCAATGGGGTCCTATCAACCTCATCATACCTGGGCAAGAAAAAATGCTAGTCCTCATGGACGGATATATGGATACAGAATGTCACTATGGGCAGAGCACACCGGAACCATTGAGGACTGCTTCACACAACCGCAGAGTCTTGAATGCGTAAGGAGAATAAGATCAATGGGTGAGATGAACTGGAAACAATTTGCTTCCGATGATGTGACGGAGATGCGGGGTCATCTGTTGAAGTATCCAGTTGAAGTTGATCGGAAAGGCAAAGTGACATCCCTTCCTGGAAGCGAGAATTTCCCAGATGTGGGAGGAAATATAACCGGTTCGTTCCTTGCAATCCAAGAAAACCTGACAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005488 GO:0005543 GO:0005546 GO:0005575 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0008081 GO:0008150 GO:0008289 GO:0009506 GO:0009605 GO:0009607 GO:0009617 GO:0009814 GO:0009816 GO:0010035 GO:0010038 GO:0016298 GO:0016787 GO:0016788 GO:0030054 GO:0035091 GO:0042221 GO:0042578 GO:0042742 GO:0043167 GO:0043168 GO:0043207 GO:0045087 GO:0046686 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0098542 GO:1901981 GO:1902936

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

1090

Amino Acids

121.56

Weight (kDa)

6.98

Isoelectric Point (pI)

45.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	275 - 400	3.5e-14	C2 domain
PLDc_2	PF13091	936 - 972	1.7e-06	PLD-like domain
PLDc	PF00614	937 - 962	3.6e-08	Phospholipase D Active site motif
PLD_C	PF12357	1009 - 1079	3.9e-31	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008961)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42010 AT2G42010 AT4G00240 AT4G00240 AT4G00240
fragaria_vesca	FvH4_7g12760
malus_domestica	MD07G1124600.v1.1
prunus_persica	Prupe.2G152100_v2.0.a1 Prupe.2G152100_v2.0.a1
pyrus_communis	pycom07g11820
rosa_chinensis	RchiOBHm_Chr1g0313111 RchiOBHm_Chr1g0351791
rosa_laevigata	RLG00000028383
rosa_multiflora	Rmu_sc0001933.1_g000011
rosa_roxburghii	Rroxscaffold_4G00303540
rosa_rugosa	Rorug01G0221600
rosa_samantha	Rh1AG000800 Rh1AG235500 Rh1BG205900 Rh1CG005200 Rh1DG233000
rosa_wichuraiana	Rw1G020500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1665
AarI	CACCTGC	1 cut(s)	121
AasI	GACNNNNNNGTC	1 cut(s)	2040
Acc16I	TGCGCA	1 cut(s)	2439
Acc36I	ACCTGC	1 cut(s)	121
AccB1I	GGYRCC	1 cut(s)	583
AccII	CGCG	1 cut(s)	2373
AccIII	TCCGGA	1 cut(s)	97
AclWI	GGATC	9 cut(s)	108, 519, 962, 1587, 1926, 2207, 2276, 2289, 2461
AcoI	YGGCCR	2 cut(s)	940, 2549
AcsI	RAATTY	8 cut(s)	46, 826, 1034, 1191, 1207, 2257, 2586, 3202
AcuI	CTGAAG	2 cut(s)	1107, 1710
AfaI	GTAC	6 cut(s)	161, 167, 326, 1262, 2061, 2624
AfeI	AGCGCT	2 cut(s)	2081, 2882
AfiI	CCNNNNNNNGG	2 cut(s)	3214, 3215
AflII	CTTAAG	1 cut(s)	2486
AflIII	ACRYGT	1 cut(s)	873
AgeI	ACCGGT	1 cut(s)	3230
AhlI	ACTAGT	3 cut(s)	962, 1537, 2201
AjnI	CCWGG	5 cut(s)	913, 1330, 2307, 2942, 3190
AjuI	GAANNNNNNNTTGG	4 cut(s)	1192, 1224, 2578, 2610
AluBI	AGCT	7 cut(s)	426, 517, 640, 738, 1132, 1238, 1773
AluI	AGCT	7 cut(s)	426, 517, 640, 738, 1132, 1238, 1773
Alw21I	GWGCWC	4 cut(s)	642, 1095, 2331, 3012
Alw26I	GTCTC	2 cut(s)	2621, 2895
Alw44I	GTGCAC	1 cut(s)	1091
AlwI	GGATC	9 cut(s)	108, 519, 962, 1587, 1926, 2207, 2276, 2289, 2461
AlwNI	CAGNNNCTG	1 cut(s)	1313
Aor13HI	TCCGGA	1 cut(s)	97
Aor51HI	AGCGCT	2 cut(s)	2081, 2882
AoxI	GGCC	7 cut(s)	208, 940, 1309, 1485, 1869, 2549, 2718
ApaLI	GTGCAC	1 cut(s)	1091
ApeKI	GCWGC	9 cut(s)	295, 1082, 1986, 2192, 2375, 2525, 2573, 2599, 2762
ApoI	RAATTY	8 cut(s)	46, 826, 1034, 1191, 1207, 2257, 2586, 3202
AsiGI	ACCGGT	1 cut(s)	3230
Asp700I	GAANNNNTTC	2 cut(s)	1701, 2163
AspLEI	GCGC	6 cut(s)	390, 2082, 2375, 2440, 2782, 2883
AsuC2I	CCSGG	1 cut(s)	251
AsuHPI	GGTGA	8 cut(s)	15, 59, 177, 543, 567, 1913, 2150, 3095
AsuII	TTCGAA	1 cut(s)	2822
AvaII	GGWCC	7 cut(s)	275, 798, 1125, 1590, 2042, 2418, 2922
AxyI	CCTNAGG	1 cut(s)	2775
BaeGI	GKGCMC	1 cut(s)	1095
BalI	TGGCCA	2 cut(s)	942, 2551
BamHI	GGATCC	1 cut(s)	2281
BanI	GGYRCC	1 cut(s)	583
BanII	GRGCYC	2 cut(s)	561, 642
Bbv12I	GWGCWC	4 cut(s)	642, 1095, 2331, 3012
BbvI	GCAGC	9 cut(s)	307, 1069, 1998, 2179, 2362, 2512, 2585, 2611, 2774
BciT130I	CCWGG	5 cut(s)	915, 1332, 2309, 2944, 3192
BciVI	GTATCC	5 cut(s)	159, 660, 673, 2978, 3159
BcnI	CCSGG	1 cut(s)	251
BcoDI	GTCTC	2 cut(s)	2621, 2895
BcuI	ACTAGT	3 cut(s)	962, 1537, 2201
BfaI	CTAG	7 cut(s)	285, 963, 1538, 2031, 2202, 2496, 2961
BfmI	CTRYAG	2 cut(s)	999, 2760
BfoI	RGCGCY	3 cut(s)	2083, 2783, 2884
BfrI	CTTAAG	1 cut(s)	2486
BfuAI	ACCTGC	1 cut(s)	121
BfuI	GTATCC	5 cut(s)	159, 660, 673, 2978, 3159
Bme1390I	CCNGG	6 cut(s)	251, 915, 1332, 2309, 2944, 3192
Bme18I	GGWCC	7 cut(s)	275, 798, 1125, 1590, 2042, 2418, 2922
BmiI	GGNNCC	9 cut(s)	585, 799, 1126, 1127, 1329, 2283, 2419, 2923, 3019
BmrFI	CCNGG	6 cut(s)	251, 915, 1332, 2309, 2944, 3192
BmrI	ACTGGG	1 cut(s)	387
BmsI	GCATC	7 cut(s)	1372, 1392, 1422, 1462, 1568, 1831, 3117
BmuI	ACTGGG	1 cut(s)	387
BpmI	CTGGAG	1 cut(s)	2681
Bpu10I	CCTNAGC	2 cut(s)	555, 2150
Bpu14I	TTCGAA	1 cut(s)	2822
BpuMI	CCSGG	1 cut(s)	251
BsaBI	GATNNNNATC	2 cut(s)	1113, 1962
BsaJI	CCNNGG	5 cut(s)	249, 507, 914, 2012, 2943
BsaWI	WCCGGW	3 cut(s)	97, 3014, 3230
BsaXI	ACNNNNNCTCC	6 cut(s)	910, 940, 1167, 1197, 1599, 1629
Bsc4I	CCNNNNNNNGG	2 cut(s)	3214, 3215
Bse118I	RCCGGY	1 cut(s)	3230
Bse1I	ACTGG	5 cut(s)	393, 1067, 1154, 3098, 3152
Bse21I	CCTNAGG	1 cut(s)	2775
Bse3DI	GCAATG	4 cut(s)	782, 1229, 1503, 2922
Bse8I	GATNNNNATC	2 cut(s)	1113, 1962
BseAI	TCCGGA	1 cut(s)	97
BseBI	CCWGG	5 cut(s)	915, 1332, 2309, 2944, 3192
BseDI	CCNNGG	5 cut(s)	249, 507, 914, 2012, 2943
BseGI	GGATG	7 cut(s)	73, 1407, 1437, 1552, 1639, 2115, 3182
BseJI	GATNNNNATC	2 cut(s)	1113, 1962
BseLI	CCNNNNNNNGG	2 cut(s)	3214, 3215
BseMI	GCAATG	4 cut(s)	782, 1229, 1503, 2922
BseMII	CTCAG	6 cut(s)	158, 546, 999, 1577, 2164, 2789
BseNI	ACTGG	5 cut(s)	393, 1067, 1154, 3098, 3152
BseRI	GAGGAG	2 cut(s)	474, 2763
BseSI	GKGCMC	1 cut(s)	1095
BseXI	GCAGC	9 cut(s)	307, 1069, 1998, 2179, 2362, 2512, 2585, 2611, 2774
BseYI	CCCAGC	4 cut(s)	1128, 1488, 1773, 2379
BsgI	GTGCAG	1 cut(s)	2592
Bsh1236I	CGCG	1 cut(s)	2373
BshFI	GGCC	7 cut(s)	210, 942, 1311, 1487, 1871, 2551, 2720
BshNI	GGYRCC	1 cut(s)	583
BshTI	ACCGGT	1 cut(s)	3230
BsiHKAI	GWGCWC	4 cut(s)	642, 1095, 2331, 3012
BsiSI	CCGG	6 cut(s)	98, 251, 1233, 1916, 3015, 3231
BslFI	GGGAC	9 cut(s)	175, 365, 414, 457, 1111, 1376, 1582, 2170, 2908
BslI	CCNNNNNNNGG	2 cut(s)	3214, 3215
BsmAI	GTCTC	2 cut(s)	2621, 2895
BsmFI	GGGAC	9 cut(s)	175, 365, 414, 457, 1111, 1376, 1582, 2170, 2908
BsmI	GAATGC	4 cut(s)	288, 1720, 2669, 3062
BsnI	GGCC	7 cut(s)	210, 942, 1311, 1487, 1871, 2551, 2720
Bsp119I	TTCGAA	1 cut(s)	2822
Bsp1286I	GDGCHC	5 cut(s)	561, 642, 1095, 2331, 3012
Bsp13I	TCCGGA	1 cut(s)	97
Bsp19I	CCATGG	1 cut(s)	2012
BspANI	GGCC	7 cut(s)	210, 942, 1311, 1487, 1871, 2551, 2720
BspCNI	CTCAG	6 cut(s)	157, 547, 998, 1578, 2163, 2788
BspEI	TCCGGA	1 cut(s)	97
BspFNI	CGCG	1 cut(s)	2373
BspHI	TCATGA	1 cut(s)	457
BspLI	GGNNCC	9 cut(s)	585, 799, 1126, 1127, 1329, 2283, 2419, 2923, 3019
BspMAI	CTGCAG	1 cut(s)	2764
BspMI	ACCTGC	1 cut(s)	121
BspPI	GGATC	9 cut(s)	108, 519, 962, 1587, 1926, 2207, 2276, 2289, 2461
BspQI	GCTCTTC	1 cut(s)	2070
BspT104I	TTCGAA	1 cut(s)	2822
BspT107I	GGYRCC	1 cut(s)	583
BspTI	CTTAAG	1 cut(s)	2486
BsrDI	GCAATG	4 cut(s)	782, 1229, 1503, 2922
BsrFI	RCCGGY	1 cut(s)	3230
BsrI	ACTGG	5 cut(s)	393, 1067, 1154, 3098, 3152
BssAI	RCCGGY	1 cut(s)	3230
BssECI	CCNNGG	5 cut(s)	249, 507, 914, 2012, 2943
BssT1I	CCWWGG	2 cut(s)	507, 2012
Bst2UI	CCWGG	5 cut(s)	915, 1332, 2309, 2944, 3192
Bst4CI	ACNGT	5 cut(s)	189, 324, 342, 1825, 1948
Bst6I	CTCTTC	2 cut(s)	496, 2070
BstAFI	CTTAAG	1 cut(s)	2486
BstAPI	GCANNNNNTGC	1 cut(s)	2023
BstBI	TTCGAA	1 cut(s)	2822
BstC8I	GCNNGC	3 cut(s)	1309, 1846, 2798
BstDSI	CCRYGG	1 cut(s)	2012
BstF5I	GGATG	7 cut(s)	73, 1407, 1437, 1552, 1639, 2115, 3182
BstFNI	CGCG	1 cut(s)	2373
BstH2I	RGCGCY	3 cut(s)	2083, 2783, 2884
BstHHI	GCGC	6 cut(s)	390, 2082, 2375, 2440, 2782, 2883
BstMAI	GTCTC	2 cut(s)	2621, 2895
BstMWI	GCNNNNNNNGC	6 cut(s)	637, 1079, 1441, 2023, 2189, 2372
BstNI	CCWGG	5 cut(s)	915, 1332, 2309, 2944, 3192
BstNSI	RCATGY	3 cut(s)	877, 2026, 2231
BstSCI	CCNGG	6 cut(s)	249, 913, 1330, 2307, 2942, 3190
BstSFI	CTRYAG	2 cut(s)	999, 2760
BstSLI	GKGCMC	1 cut(s)	1095
BstUI	CGCG	1 cut(s)	2373
BstV1I	GCAGC	9 cut(s)	307, 1069, 1998, 2179, 2362, 2512, 2585, 2611, 2774
BstX2I	RGATCY	2 cut(s)	1579, 2281
BstXI	CCANNNNNNTGG	1 cut(s)	1136
BstYI	RGATCY	2 cut(s)	1579, 2281
Bsu36I	CCTNAGG	1 cut(s)	2775
BsuI	GTATCC	5 cut(s)	159, 660, 673, 2978, 3159
BsuRI	GGCC	7 cut(s)	210, 942, 1311, 1487, 1871, 2551, 2720
BtgI	CCRYGG	1 cut(s)	2012
BtgZI	GCGATG	1 cut(s)	159
BtsCI	GGATG	7 cut(s)	73, 1407, 1437, 1552, 1639, 2115, 3182
BtsI	GCAGTG	2 cut(s)	1752, 1989
BtsIMutI	CAGTG	4 cut(s)	1734, 1752, 1953, 1989
BveI	ACCTGC	1 cut(s)	121
Cac8I	GCNNGC	3 cut(s)	1309, 1846, 2798
CaiI	CAGNNNCTG	1 cut(s)	1313
CciI	TCATGA	1 cut(s)	457
CfoI	GCGC	6 cut(s)	390, 2082, 2375, 2440, 2782, 2883
Cfr10I	RCCGGY	1 cut(s)	3230
CseI	GACGC	3 cut(s)	1057, 1844, 2172
CsiI	ACCWGGT	1 cut(s)	2307
Csp6I	GTAC	6 cut(s)	160, 166, 325, 1261, 2060, 2623
CspAI	ACCGGT	1 cut(s)	3230
CviQI	GTAC	6 cut(s)	160, 166, 325, 1261, 2060, 2623
DraI	TTTAAA	1 cut(s)	2691
DrdI	GACNNNNNNGTC	1 cut(s)	2040
DseDI	GACNNNNNNGTC	1 cut(s)	2040
EaeI	YGGCCR	2 cut(s)	940, 2549
Eam1104I	CTCTTC	2 cut(s)	496, 2070
EarI	CTCTTC	2 cut(s)	496, 2070
EciI	GGCGGA	1 cut(s)	492
Ecl136II	GAGCTC	1 cut(s)	640
Eco130I	CCWWGG	2 cut(s)	507, 2012
Eco24I	GRGCYC	2 cut(s)	561, 642
Eco47I	GGWCC	7 cut(s)	275, 798, 1125, 1590, 2042, 2418, 2922
Eco47III	AGCGCT	2 cut(s)	2081, 2882
Eco53kI	GAGCTC	1 cut(s)	640
Eco57I	CTGAAG	2 cut(s)	1107, 1710
Eco81I	CCTNAGG	1 cut(s)	2775
EcoICRI	GAGCTC	1 cut(s)	640
EcoO109I	RGGNCCY	6 cut(s)	209, 798, 1125, 1310, 2418, 2922
EcoRI	GAATTC	3 cut(s)	46, 1207, 2586
EcoRII	CCWGG	5 cut(s)	913, 1330, 2307, 2942, 3190
EcoT14I	CCWWGG	2 cut(s)	507, 2012
EcoT38I	GRGCYC	2 cut(s)	561, 642
ErhI	CCWWGG	2 cut(s)	507, 2012
FalI	AAGNNNNNCTT	4 cut(s)	1356, 1388, 1725, 1757
FaqI	GGGAC	9 cut(s)	175, 365, 414, 457, 1111, 1376, 1582, 2170, 2908
FauI	CCCGC	1 cut(s)	3123
FauNDI	CATATG	6 cut(s)	973, 1015, 1438, 2053, 2134, 2356
FokI	GGATG	7 cut(s)	60, 1414, 1444, 1559, 1646, 2122, 3169
FriOI	GRGCYC	2 cut(s)	561, 642
FspAI	RTGCGCAY	1 cut(s)	2439
FspBI	CTAG	7 cut(s)	285, 963, 1538, 2031, 2202, 2496, 2961
FspI	TGCGCA	1 cut(s)	2439
GlaI	GCGC	6 cut(s)	389, 2081, 2374, 2439, 2781, 2882
GsaI	CCCAGC	4 cut(s)	1132, 1492, 1777, 2383
GsuI	CTGGAG	1 cut(s)	2681
HaeII	RGCGCY	3 cut(s)	2083, 2783, 2884
HaeIII	GGCC	7 cut(s)	210, 942, 1311, 1487, 1871, 2551, 2720
HapII	CCGG	6 cut(s)	98, 251, 1233, 1916, 3015, 3231
HgaI	GACGC	3 cut(s)	1057, 1844, 2172
HhaI	GCGC	6 cut(s)	390, 2082, 2375, 2440, 2782, 2883
Hin6I	GCGC	6 cut(s)	388, 2080, 2373, 2438, 2780, 2881
HinP1I	GCGC	6 cut(s)	388, 2080, 2373, 2438, 2780, 2881
HpaII	CCGG	6 cut(s)	98, 251, 1233, 1916, 3015, 3231
HphI	GGTGA	8 cut(s)	15, 59, 177, 543, 567, 1913, 2150, 3095
Hpy166II	GTNNAC	4 cut(s)	320, 1093, 1288, 1834
Hpy8I	GTNNAC	4 cut(s)	320, 1093, 1288, 1834
HpyAV	CCTTC	8 cut(s)	189, 588, 799, 869, 1598, 2356, 2885, 3197
HpyCH4III	ACNGT	5 cut(s)	189, 324, 342, 1825, 1948
HpyCH4IV	ACGT	2 cut(s)	683, 1480
HpyF10VI	GCNNNNNNNGC	6 cut(s)	637, 1079, 1441, 2023, 2189, 2372
HpySE526I	ACGT	2 cut(s)	683, 1480
HspAI	GCGC	6 cut(s)	388, 2080, 2373, 2438, 2780, 2881
KflI	GGGWCCC	1 cut(s)	1125
Kpn2I	TCCGGA	1 cut(s)	97
LguI	GCTCTTC	1 cut(s)	2070
LmnI	GCTCC	5 cut(s)	637, 1175, 1235, 1650, 2180
Lsp1109I	GCAGC	9 cut(s)	307, 1069, 1998, 2179, 2362, 2512, 2585, 2611, 2774
LweI	GCATC	7 cut(s)	1372, 1392, 1422, 1462, 1568, 1831, 3117
MabI	ACCWGGT	1 cut(s)	2307
MaeI	CTAG	7 cut(s)	285, 963, 1538, 2031, 2202, 2496, 2961
MaeII	ACGT	2 cut(s)	683, 1480
MaeIII	GTNAC	7 cut(s)	750, 909, 1366, 2204, 2994, 3118, 3178
MboII	GAAGA	7 cut(s)	483, 711, 1574, 1709, 1716, 2087, 2689
MfeI	CAATTG	4 cut(s)	1269, 1277, 2247, 2428
MflI	RGATCY	2 cut(s)	1579, 2281
MhlI	GDGCHC	5 cut(s)	561, 642, 1095, 2331, 3012
MlsI	TGGCCA	2 cut(s)	942, 2551
MluNI	TGGCCA	2 cut(s)	942, 2551
MlyI	GAGTC	4 cut(s)	589, 958, 2246, 3058
MmeI	TCCRAC	5 cut(s)	1774, 1858, 2136, 2158, 2588
Mox20I	TGGCCA	2 cut(s)	942, 2551
MroI	TCCGGA	1 cut(s)	97
MroXI	GAANNNNTTC	2 cut(s)	1701, 2163
MscI	TGGCCA	2 cut(s)	942, 2551
MseI	TTAA	7 cut(s)	744, 1104, 1496, 2087, 2265, 2487, 2690
MslI	CAYNNNNRTG	5 cut(s)	462, 1059, 1956, 2336, 2543
Msp20I	TGGCCA	2 cut(s)	942, 2551
MspA1I	CMGCKG	3 cut(s)	415, 710, 2048
MspCI	CTTAAG	1 cut(s)	2486
MspI	CCGG	6 cut(s)	98, 251, 1233, 1916, 3015, 3231
MspR9I	CCNGG	6 cut(s)	251, 915, 1332, 2309, 2944, 3192
MunI	CAATTG	4 cut(s)	1269, 1277, 2247, 2428
Mva1269I	GAATGC	4 cut(s)	288, 1720, 2669, 3062
MvaI	CCWGG	5 cut(s)	915, 1332, 2309, 2944, 3192
MvnI	CGCG	1 cut(s)	2373
MwoI	GCNNNNNNNGC	6 cut(s)	637, 1079, 1441, 2023, 2189, 2372
NciI	CCSGG	1 cut(s)	251
NcoI	CCATGG	1 cut(s)	2012
NdeI	CATATG	6 cut(s)	973, 1015, 1438, 2053, 2134, 2356
NlaIV	GGNNCC	9 cut(s)	585, 799, 1126, 1127, 1329, 2283, 2419, 2923, 3019
NmuCI	GTSAC	5 cut(s)	750, 2204, 2994, 3118, 3178
NsbI	TGCGCA	1 cut(s)	2439
NspI	RCATGY	3 cut(s)	877, 2026, 2231
NspV	TTCGAA	1 cut(s)	2822
PagI	TCATGA	1 cut(s)	457
PaqCI	CACCTGC	1 cut(s)	121
PciI	ACATGT	1 cut(s)	873
PciSI	GCTCTTC	1 cut(s)	2070
PctI	GAATGC	4 cut(s)	288, 1720, 2669, 3062
PdmI	GAANNNNTTC	2 cut(s)	1701, 2163
PfeI	GAWTC	6 cut(s)	406, 704, 1677, 2141, 2164, 2401
PfoI	TCCNGGA	1 cut(s)	3190
PinAI	ACCGGT	1 cut(s)	3230
PleI	GAGTC	4 cut(s)	589, 957, 2246, 3057
PpsI	GAGTC	4 cut(s)	589, 957, 2246, 3057
PpuMI	RGGWCCY	4 cut(s)	798, 1125, 2418, 2922
PscI	ACATGT	1 cut(s)	873
PsiI	TTATAA	1 cut(s)	1665
Psp124BI	GAGCTC	1 cut(s)	642
Psp5II	RGGWCCY	4 cut(s)	798, 1125, 2418, 2922
Psp6I	CCWGG	5 cut(s)	913, 1330, 2307, 2942, 3190
PspFI	CCCAGC	4 cut(s)	1128, 1488, 1773, 2379
PspGI	CCWGG	5 cut(s)	913, 1330, 2307, 2942, 3190
PspN4I	GGNNCC	9 cut(s)	585, 799, 1126, 1127, 1329, 2283, 2419, 2923, 3019
PspPPI	RGGWCCY	4 cut(s)	798, 1125, 2418, 2922
PsrI	GAACNNNNNNTAC	2 cut(s)	1789, 1821
PstI	CTGCAG	1 cut(s)	2764
PstNI	CAGNNNCTG	1 cut(s)	1313
PsuI	RGATCY	2 cut(s)	1579, 2281
RsaI	GTAC	6 cut(s)	161, 167, 326, 1262, 2061, 2624
RsaNI	GTAC	6 cut(s)	160, 166, 325, 1261, 2060, 2623
RseI	CAYNNNNRTG	5 cut(s)	462, 1059, 1956, 2336, 2543
SacI	GAGCTC	1 cut(s)	642
SapI	GCTCTTC	1 cut(s)	2070
SaqAI	TTAA	7 cut(s)	744, 1104, 1496, 2087, 2265, 2487, 2690
SchI	GAGTC	4 cut(s)	589, 958, 2246, 3058
ScrFI	CCNGG	6 cut(s)	251, 915, 1332, 2309, 2944, 3192
SduI	GDGCHC	5 cut(s)	561, 642, 1095, 2331, 3012
SexAI	ACCWGGT	1 cut(s)	2307
SfaNI	GCATC	7 cut(s)	1372, 1392, 1422, 1462, 1568, 1831, 3117
SfcI	CTRYAG	2 cut(s)	999, 2760
SfuI	TTCGAA	1 cut(s)	2822
SinI	GGWCC	7 cut(s)	275, 798, 1125, 1590, 2042, 2418, 2922
SmiMI	CAYNNNNRTG	5 cut(s)	462, 1059, 1956, 2336, 2543
SmlI	CTYRAG	1 cut(s)	2486
SmoI	CTYRAG	1 cut(s)	2486
SpeI	ACTAGT	3 cut(s)	962, 1537, 2201
SspMI	CTAG	7 cut(s)	285, 963, 1538, 2031, 2202, 2496, 2961
SstI	GAGCTC	1 cut(s)	642
StyD4I	CCNGG	6 cut(s)	249, 913, 1330, 2307, 2942, 3190
StyI	CCWWGG	2 cut(s)	507, 2012
TaaI	ACNGT	5 cut(s)	189, 324, 342, 1825, 1948
TaiI	ACGT	2 cut(s)	686, 1483
TaqI	TCGA	4 cut(s)	404, 947, 1211, 2822
TatI	WGTACW	2 cut(s)	1260, 2059
TauI	GCSGC	4 cut(s)	418, 713, 1710, 2051
TfiI	GAWTC	6 cut(s)	406, 704, 1677, 2141, 2164, 2401
Tru1I	TTAA	7 cut(s)	744, 1104, 1496, 2087, 2265, 2487, 2690
Tru9I	TTAA	7 cut(s)	744, 1104, 1496, 2087, 2265, 2487, 2690
TscAI	CASTG	4 cut(s)	1734, 1759, 1953, 1996
TseFI	GTSAC	5 cut(s)	750, 2204, 2994, 3118, 3178
TseI	GCWGC	9 cut(s)	295, 1082, 1986, 2192, 2375, 2525, 2573, 2599, 2762
Tsp45I	GTSAC	5 cut(s)	750, 2204, 2994, 3118, 3178
TspGWI	ACGGA	3 cut(s)	2231, 2989, 3137
TspRI	CASTG	4 cut(s)	1734, 1759, 1953, 1996
Vha464I	CTTAAG	1 cut(s)	2486
VneI	GTGCAC	1 cut(s)	1091
VpaK11BI	GGWCC	7 cut(s)	275, 798, 1125, 1590, 2042, 2418, 2922
XapI	RAATTY	8 cut(s)	46, 826, 1034, 1191, 1207, 2257, 2586, 3202
XbaI	TCTAGA	1 cut(s)	2030
XceI	RCATGY	3 cut(s)	877, 2026, 2231
XcmI	CCANNNNNNNNNTGG	4 cut(s)	341, 1298, 1394, 2010
XmnI	GAANNNNTTC	2 cut(s)	1701, 2163
XspI	CTAG	7 cut(s)	285, 963, 1538, 2031, 2202, 2496, 2961

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.