MD07G1204100.v1.1

Regulator of chromosome condensation (RCC1) repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0004604
Physical Location & Seq
Forward (+)
28164392 .. 28169473
5082 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1204100.v1.1.491

Sequence Viewer

Length: 1434 bp
ATGAATGCGGAGGGAATTACGGAGGGAGAGGAAGTGAAGATGGAAGAGGGGAAAGAGAAGGTGGTGTTCATGTGGGGATATCTTCCCGGAGCTCTGCCGCAGAGGTCGCCGCTTTTGTCGCCGACGGTCGTGCGGACGGCCGACGCCGAGTACGCGTGGAAGGACGTATGCGGTGGCGGGTGCGGCTTCGCCATGGCCATTTCTGAGCCTGGGAAGCTTATTACATGGGGCTCAACAGATGATCTAGGCCAAAGCTATGTGACATCTGGGATGCACGGGGAAAACCCGGAGCCTTTTCCTCTTCCGAATGAAGCTTGTATAGTACAGGCGGCCGCGGGTTGGGCCCATTGTGTTGCAGTCACAGATAATGGAGGAGTTTACACATGGGGATGGAATGAGTGTGTTCCATCTGGGAAGGTCTTTGGGGAGCAATCTATGGGTTCAGACGGTGTAAAGGATGCCTATGAAAGGCAGAATTCTTTTATGACTGAGCAAGTTAGCCCTCGCTCTCAAGGCTCACGATCCACCGCTGCGGCAGTTTCTGCTAGTGAAGAAAGTACAAAGCGAAGAAAATTGTCATCAGCAAAACAAGTGGCTGAAAGTTCTTCATCTGGTGATGAACCTCCATCAGCATTGCCTTGTCTTGTGGCATTGAACCCGGGAGTTAGAATAGCCAGTGTTGCTGCTGGAGGGCGCCATACTCTGGCATTATCAGATATAGGACAAGTGTGGGGATGGGGCTATGGAGGTGAAGGGCAGCTTGGTCTGGGCTCCCGCATACGTATGGTGTCCTCTCCTCATCCTGTACCTTGCATTGAGTCCTCTTATGGAAAAGATAGATCTGCAGCACTGTCTCGAGGAACCATGGGTTCAGACGGATTTGGTGTTAGGGTTCCTGGAAATTATGTGAAGGGGATTGCCAGTGGAGGGCGACATAGTGTAGTAATCACAGATGCTGGAGCAGTACTTGCTTTTGGTTGGGGGCTGTATGGACAGTGTGGGCAAGGAAGCACAGATGACGAGTTAAGCCCGATTTGTGTATCTTCATTACTGGGTATCCGGATAGAGGGTGTTGCGGCAGGACTGTGGCACACTGTCTGCATTTCAGCTGATGGCGATGTTTATGCATTTGGCGGGAATCAGTTTGGACAGCTGGGAACCGGAGCAGATCAAGCTGAGACAATACCAAGACTTTTGGATGCTCCAATTCTGGAAAATGAGAATGCAAAGATTGTTTCCTGTGGGGCGCGCCATAGTGCCATAATCACGGAGGATGGGAAAGTTTTCGGCTGGGGATGGAACAAGTATGGTCAGCTTGGCCTGGGTGATGTGATCGACCGCAACATTCCAGCTCAAGTCACGATCGACGGATGTGTGCCGAAAAATGTGGCATGCGGCTGGTGGCATACCTTACTGCTTGCTGAACCTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RCC1 RCC1_2

Protein Analysis

478

Amino Acids

49.92

Weight (kDa)

4.99

Isoelectric Point (pI)

45.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_RLD PF25390 34 - 136 2.1e-14 RCC1-like domain
RCC1_2 PF13540 107 - 134 8.2e-08 Regulator of chromosome condensation (RCC1) repeat
WD40_RLD PF25390 210 - 471 2.5e-53 RCC1-like domain
RCC1_2 PF13540 224 - 253 1.1e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 320 - 368 9.2e-11 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 357 - 384 4.8e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 371 - 422 4.2e-11 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 412 - 438 2e-11 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 425 - 473 3.5e-14 Regulator of chromosome condensation (RCC1) repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 693
AccB7I CCANNNNNTGG 1 cut(s) 703
AccII CGCG 3 cut(s) 155, 335, 1249
AccIII TCCGGA 1 cut(s) 1059
AclWI GGATC 1 cut(s) 516
AcoI YGGCCR 3 cut(s) 138, 195, 330
AcsI RAATTY 1 cut(s) 475
AcyI GRCGYC 2 cut(s) 144, 694
AfaI GTAC 5 cut(s) 152, 324, 559, 807, 966
AfiI CCNNNNNNNGG 5 cut(s) 339, 468, 703, 927, 1066
AflIII ACRYGT 1 cut(s) 153
AgsI TTSAA 1 cut(s) 655
AjnI CCWGG 3 cut(s) 208, 895, 1320
AjuI GAANNNNNNNTTGG 2 cut(s) 744, 776
Alw21I GWGCWC 1 cut(s) 94
Alw26I GTCTC 2 cut(s) 858, 1172
AlwI GGATC 1 cut(s) 516
AlwNI CAGNNNCTG 2 cut(s) 542, 956
Ama87I CYCGRG 2 cut(s) 658, 855
Aor13HI TCCGGA 1 cut(s) 1059
AoxI GGCC 6 cut(s) 138, 195, 247, 330, 342, 1318
ApaI GGGCCC 1 cut(s) 346
ApeKI GCWGC 4 cut(s) 530, 683, 757, 845
ApoI RAATTY 1 cut(s) 475
AscI GGCGCGCC 1 cut(s) 1247
Asp700I GAANNNNTTC 1 cut(s) 1283
AspLEI GCGC 3 cut(s) 696, 1249, 1251
AspS9I GGNCC 2 cut(s) 342, 343
AsuC2I CCSGG 4 cut(s) 87, 287, 659, 660
AsuHPI GGTGA 3 cut(s) 626, 761, 1337
AvaI CYCGRG 2 cut(s) 658, 855
BaeGI GKGCMC 1 cut(s) 346
BalI TGGCCA 1 cut(s) 197
BanI GGYRCC 1 cut(s) 693
BanII GRGCYC 4 cut(s) 94, 233, 346, 773
Bbv12I GWGCWC 1 cut(s) 94
BbvI GCAGC 4 cut(s) 517, 670, 769, 857
BccI CCATC 8 cut(s) 34, 384, 415, 634, 729, 1106, 1268, 1290
BceAI ACGGC 1 cut(s) 153
BcgI CGANNNNNNTGC 4 cut(s) 112, 146, 1106, 1140
BciT130I CCWGG 3 cut(s) 210, 897, 1322
BciVI GTATCC 1 cut(s) 1067
BcnI CCSGG 4 cut(s) 87, 287, 659, 660
BcoDI GTCTC 2 cut(s) 858, 1172
BfaI CTAG 2 cut(s) 245, 546
BfmI CTRYAG 1 cut(s) 843
BfoI RGCGCY 1 cut(s) 697
BfuI GTATCC 1 cut(s) 1067
BglII AGATCT 1 cut(s) 839
BmcAI AGTACT 1 cut(s) 966
Bme1390I CCNGG 7 cut(s) 87, 210, 287, 659, 660, 897, 1322
BmeT110I CYCGRG 2 cut(s) 658, 855
BmgT120I GGNCC 2 cut(s) 342, 343
BmiI GGNNCC 7 cut(s) 291, 344, 695, 772, 862, 894, 1159
BmrFI CCNGG 7 cut(s) 87, 210, 287, 659, 660, 897, 1322
BmrI ACTGGG 1 cut(s) 1061
BmsI GCATC 4 cut(s) 261, 448, 943, 1189
BmuI ACTGGG 1 cut(s) 1061
BpmI CTGGAG 2 cut(s) 708, 978
BpuEI CTTGAG 2 cut(s) 495, 1338
BpuMI CCSGG 4 cut(s) 87, 287, 659, 660
BsaAI YACGTR 1 cut(s) 782
BsaHI GRCGYC 2 cut(s) 144, 694
BsaJI CCNNGG 6 cut(s) 192, 209, 333, 658, 864, 1321
BsaWI WCCGGW 2 cut(s) 1059, 1160
BsaXI ACNNNNNCTCC 2 cut(s) 18, 48
Bsc4I CCNNNNNNNGG 5 cut(s) 339, 468, 703, 927, 1066
Bse1I ACTGG 3 cut(s) 675, 921, 1056
Bse3DI GCAATG 1 cut(s) 632
BseAI TCCGGA 1 cut(s) 1059
BseBI CCWGG 3 cut(s) 210, 897, 1322
BseDI CCNNGG 6 cut(s) 192, 209, 333, 658, 864, 1321
BseGI GGATG 9 cut(s) 276, 395, 463, 740, 799, 1204, 1279, 1301, 1376
BseLI CCNNNNNNNGG 5 cut(s) 339, 468, 703, 927, 1066
BseMI GCAATG 1 cut(s) 632
BseMII CTCAG 3 cut(s) 195, 480, 1167
BseNI ACTGG 3 cut(s) 675, 921, 1056
BsePI GCGCGC 1 cut(s) 1247
BseRI GAGGAG 2 cut(s) 387, 786
BseSI GKGCMC 1 cut(s) 346
BseX3I CGGCCG 2 cut(s) 138, 330
BseXI GCAGC 4 cut(s) 517, 670, 769, 857
BseYI CCCAGC 2 cut(s) 1153, 1290
Bsh1236I CGCG 3 cut(s) 155, 335, 1249
Bsh1285I CGRYCG 5 cut(s) 129, 141, 333, 1339, 1365
BshFI GGCC 6 cut(s) 140, 197, 249, 332, 344, 1320
BshNI GGYRCC 1 cut(s) 693
BsiEI CGRYCG 5 cut(s) 129, 141, 333, 1339, 1365
BsiHKAI GWGCWC 1 cut(s) 94
BsiHKCI CYCGRG 2 cut(s) 658, 855
BsiSI CCGG 5 cut(s) 87, 287, 659, 1060, 1161
BslI CCNNNNNNNGG 5 cut(s) 339, 468, 703, 927, 1066
BsmAI GTCTC 2 cut(s) 858, 1172
BsmI GAATGC 2 cut(s) 10, 1228
BsnI GGCC 6 cut(s) 140, 197, 249, 332, 344, 1320
BsoBI CYCGRG 2 cut(s) 658, 855
Bsp120I GGGCCC 1 cut(s) 342
Bsp1286I GDGCHC 4 cut(s) 94, 233, 346, 773
Bsp13I TCCGGA 1 cut(s) 1059
Bsp143I GATC 6 cut(s) 241, 521, 839, 1168, 1332, 1362
Bsp19I CCATGG 2 cut(s) 192, 864
BspANI GGCC 6 cut(s) 140, 197, 249, 332, 344, 1320
BspCNI CTCAG 3 cut(s) 196, 481, 1168
BspEI TCCGGA 1 cut(s) 1059
BspFNI CGCG 3 cut(s) 155, 335, 1249
BspLI GGNNCC 7 cut(s) 291, 344, 695, 772, 862, 894, 1159
BspMAI CTGCAG 1 cut(s) 847
BspPI GGATC 1 cut(s) 516
BspT107I GGYRCC 1 cut(s) 693
BsrDI GCAATG 1 cut(s) 632
BsrI ACTGG 3 cut(s) 675, 921, 1056
BssECI CCNNGG 6 cut(s) 192, 209, 333, 658, 864, 1321
BssHII GCGCGC 1 cut(s) 1247
BssMI GATC 6 cut(s) 241, 521, 839, 1168, 1332, 1362
BssNI GRCGYC 2 cut(s) 144, 694
BssT1I CCWWGG 2 cut(s) 192, 864
Bst2UI CCWGG 3 cut(s) 210, 897, 1322
Bst4CI ACNGT 6 cut(s) 127, 449, 852, 996, 1086, 1096
Bst6I CTCTTC 2 cut(s) 39, 306
BstACI GRCGYC 2 cut(s) 144, 694
BstAPI GCANNNNNTGC 2 cut(s) 542, 968
BstBAI YACGTR 1 cut(s) 782
BstC8I GCNNGC 3 cut(s) 1249, 1393, 1419
BstDEI CTNAG 3 cut(s) 204, 489, 1176
BstDSI CCRYGG 3 cut(s) 192, 333, 864
BstENI CCTNNNNNAGG 1 cut(s) 466
BstF5I GGATG 9 cut(s) 276, 395, 463, 740, 799, 1204, 1279, 1301, 1376
BstFNI CGCG 3 cut(s) 155, 335, 1249
BstH2I RGCGCY 1 cut(s) 697
BstHHI GCGC 3 cut(s) 696, 1249, 1251
BstKTI GATC 6 cut(s) 244, 524, 842, 1171, 1335, 1365
BstMAI GTCTC 2 cut(s) 858, 1172
BstMBI GATC 6 cut(s) 241, 521, 839, 1168, 1332, 1362
BstMCI CGRYCG 5 cut(s) 129, 141, 333, 1339, 1365
BstNI CCWGG 3 cut(s) 210, 897, 1322
BstNSI RCATGY 1 cut(s) 1395
BstSCI CCNGG 7 cut(s) 85, 208, 285, 657, 658, 895, 1320
BstSFI CTRYAG 1 cut(s) 843
BstSLI GKGCMC 1 cut(s) 346
BstSNI TACGTA 1 cut(s) 782
BstUI CGCG 3 cut(s) 155, 335, 1249
BstV1I GCAGC 4 cut(s) 517, 670, 769, 857
BstX2I RGATCY 1 cut(s) 839
BstYI RGATCY 1 cut(s) 839
BstZI CGGCCG 2 cut(s) 138, 330
BsuI GTATCC 1 cut(s) 1067
BsuRI GGCC 6 cut(s) 140, 197, 249, 332, 344, 1320
BtgI CCRYGG 3 cut(s) 192, 333, 864
BtgZI GCGATG 1 cut(s) 1131
BtsCI GGATG 9 cut(s) 276, 395, 463, 740, 799, 1204, 1279, 1301, 1376
BtsIMutI CAGTG 5 cut(s) 682, 848, 928, 1001, 1092
Cac8I GCNNGC 3 cut(s) 1249, 1393, 1419
CaiI CAGNNNCTG 2 cut(s) 542, 956
CciNI GCGGCCGC 1 cut(s) 330
CfoI GCGC 3 cut(s) 696, 1249, 1251
Cfr13I GGNCC 2 cut(s) 342, 343
Cfr42I CCGCGG 1 cut(s) 336
Cfr9I CCCGGG 1 cut(s) 658
CseI GACGC 1 cut(s) 152
Csp6I GTAC 5 cut(s) 151, 323, 558, 806, 965
CspCI CAANNNNNGTGG 2 cut(s) 573, 608
CviAII CATG 6 cut(s) 70, 193, 225, 384, 865, 1392
CviQI GTAC 5 cut(s) 151, 323, 558, 806, 965
DdeI CTNAG 3 cut(s) 204, 489, 1176
DinI GGCGCC 1 cut(s) 695
DpnI GATC 6 cut(s) 243, 523, 841, 1170, 1334, 1364
DpnII GATC 6 cut(s) 241, 521, 839, 1168, 1332, 1362
EaeI YGGCCR 3 cut(s) 138, 195, 330
EagI CGGCCG 2 cut(s) 138, 330
Eam1104I CTCTTC 2 cut(s) 39, 306
EarI CTCTTC 2 cut(s) 39, 306
Ecl136II GAGCTC 1 cut(s) 92
EclXI CGGCCG 2 cut(s) 138, 330
Eco105I TACGTA 1 cut(s) 782
Eco130I CCWWGG 2 cut(s) 192, 864
Eco24I GRGCYC 4 cut(s) 94, 233, 346, 773
Eco32I GATATC 1 cut(s) 80
Eco52I CGGCCG 2 cut(s) 138, 330
Eco53kI GAGCTC 1 cut(s) 92
Eco88I CYCGRG 2 cut(s) 658, 855
EcoICRI GAGCTC 1 cut(s) 92
EcoNI CCTNNNNNAGG 1 cut(s) 466
EcoRI GAATTC 1 cut(s) 475
EcoRII CCWGG 3 cut(s) 208, 895, 1320
EcoRV GATATC 1 cut(s) 80
EcoT14I CCWWGG 2 cut(s) 192, 864
EcoT22I ATGCAT 1 cut(s) 1129
EcoT38I GRGCYC 4 cut(s) 94, 233, 346, 773
EgeI GGCGCC 1 cut(s) 695
EheI GGCGCC 1 cut(s) 695
ErhI CCWWGG 2 cut(s) 192, 864
FaeI CATG 6 cut(s) 73, 196, 228, 387, 868, 1395
FalI AAGNNNNNCTT 2 cut(s) 744, 776
FatI CATG 6 cut(s) 69, 192, 224, 383, 864, 1391
FauI CCCGC 4 cut(s) 170, 328, 782, 1127
FokI GGATG 9 cut(s) 283, 402, 470, 747, 786, 1211, 1286, 1308, 1383
FriOI GRGCYC 4 cut(s) 94, 233, 346, 773
FspBI CTAG 2 cut(s) 245, 546
GlaI GCGC 3 cut(s) 695, 1248, 1250
GsaI CCCAGC 2 cut(s) 1157, 1294
GsuI CTGGAG 2 cut(s) 708, 978
HaeII RGCGCY 1 cut(s) 697
HaeIII GGCC 6 cut(s) 140, 197, 249, 332, 344, 1320
HapII CCGG 5 cut(s) 87, 287, 659, 1060, 1161
HgaI GACGC 1 cut(s) 152
HhaI GCGC 3 cut(s) 696, 1249, 1251
Hin1I GRCGYC 2 cut(s) 144, 694
Hin1II CATG 6 cut(s) 73, 196, 228, 387, 868, 1395
Hin6I GCGC 3 cut(s) 694, 1247, 1249
HinP1I GCGC 3 cut(s) 694, 1247, 1249
HindIII AAGCTT 2 cut(s) 215, 312
HinfI GANTC 2 cut(s) 818, 1138
HpaII CCGG 5 cut(s) 87, 287, 659, 1060, 1161
HphI GGTGA 3 cut(s) 626, 761, 1337
Hpy166II GTNNAC 1 cut(s) 379
Hpy188I TCNGA 5 cut(s) 205, 306, 445, 715, 874
Hpy188III TCNNGA 5 cut(s) 519, 855, 1060, 1211, 1360
Hpy8I GTNNAC 1 cut(s) 379
Hpy99I CGWCG 3 cut(s) 127, 146, 1370
HpyAV CCTTC 5 cut(s) 52, 154, 409, 746, 904
HpyCH4III ACNGT 6 cut(s) 127, 449, 852, 996, 1086, 1096
HpyCH4IV ACGT 2 cut(s) 165, 781
HpyCH4V TGCA 7 cut(s) 274, 356, 813, 845, 1101, 1127, 1226
HpyF3I CTNAG 3 cut(s) 204, 489, 1176
HpySE526I ACGT 2 cut(s) 165, 781
Hsp92I GRCGYC 2 cut(s) 144, 694
Hsp92II CATG 6 cut(s) 73, 196, 228, 387, 868, 1395
HspAI GCGC 3 cut(s) 694, 1247, 1249
KasI GGCGCC 1 cut(s) 693
Kpn2I TCCGGA 1 cut(s) 1059
KspI CCGCGG 1 cut(s) 336
Kzo9I GATC 6 cut(s) 241, 521, 839, 1168, 1332, 1362
LmnI GCTCC 7 cut(s) 89, 289, 427, 776, 959, 1163, 1207
Lsp1109I GCAGC 4 cut(s) 517, 670, 769, 857
LweI GCATC 4 cut(s) 261, 448, 943, 1189
MaeI CTAG 2 cut(s) 245, 546
MaeII ACGT 2 cut(s) 165, 781
MaeIII GTNAC 3 cut(s) 259, 358, 1357
MalI GATC 6 cut(s) 243, 523, 841, 1170, 1334, 1364
MboI GATC 6 cut(s) 241, 521, 839, 1168, 1332, 1362
MboII GAAGA 8 cut(s) 49, 56, 74, 293, 563, 579, 597, 1035
MflI RGATCY 1 cut(s) 839
MhlI GDGCHC 4 cut(s) 94, 233, 346, 773
MlsI TGGCCA 1 cut(s) 197
MluCI AATT 5 cut(s) 15, 475, 572, 901, 1206
MluI ACGCGT 1 cut(s) 153
MluNI TGGCCA 1 cut(s) 197
Mly113I GGCGCC 1 cut(s) 694
MlyI GAGTC 1 cut(s) 827
Mox20I TGGCCA 1 cut(s) 197
Mph1103I ATGCAT 1 cut(s) 1129
MroI TCCGGA 1 cut(s) 1059
MroXI GAANNNNTTC 1 cut(s) 1283
MscI TGGCCA 1 cut(s) 197
MseI TTAA 1 cut(s) 1025
MslI CAYNNNNRTG 2 cut(s) 388, 782
Msp20I TGGCCA 1 cut(s) 197
MspA1I CMGCKG 4 cut(s) 335, 530, 1109, 1153
MspI CCGG 5 cut(s) 87, 287, 659, 1060, 1161
MspR9I CCNGG 7 cut(s) 87, 210, 287, 659, 660, 897, 1322
Mva1269I GAATGC 2 cut(s) 10, 1228
MvaI CCWGG 3 cut(s) 210, 897, 1322
MvnI CGCG 3 cut(s) 155, 335, 1249
NarI GGCGCC 1 cut(s) 694
NciI CCSGG 4 cut(s) 87, 287, 659, 660
NcoI CCATGG 2 cut(s) 192, 864
NdeII GATC 6 cut(s) 241, 521, 839, 1168, 1332, 1362
NlaIII CATG 6 cut(s) 73, 196, 228, 387, 868, 1395
NlaIV GGNNCC 7 cut(s) 291, 344, 695, 772, 862, 894, 1159
NmeAIII GCCGAG 1 cut(s) 172
NmuCI GTSAC 3 cut(s) 259, 358, 1357
NotI GCGGCCGC 1 cut(s) 330
NsiI ATGCAT 1 cut(s) 1129
NspI RCATGY 1 cut(s) 1395
PaeI GCATGC 1 cut(s) 1395
PaeR7I CTCGAG 1 cut(s) 855
PalAI GGCGCGCC 1 cut(s) 1247
PauI GCGCGC 1 cut(s) 1247
PctI GAATGC 2 cut(s) 10, 1228
PdmI GAANNNNTTC 1 cut(s) 1283
PfeI GAWTC 1 cut(s) 1138
PflMI CCANNNNNTGG 1 cut(s) 703
PfoI TCCNGGA 2 cut(s) 85, 895
Ple19I CGATCG 1 cut(s) 1365
PleI GAGTC 1 cut(s) 826
PluTI GGCGCC 1 cut(s) 697
PpsI GAGTC 1 cut(s) 826
Ppu21I YACGTR 1 cut(s) 782
Psp124BI GAGCTC 1 cut(s) 94
Psp6I CCWGG 3 cut(s) 208, 895, 1320
PspFI CCCAGC 2 cut(s) 1153, 1290
PspGI CCWGG 3 cut(s) 208, 895, 1320
PspN4I GGNNCC 7 cut(s) 291, 344, 695, 772, 862, 894, 1159
PspOMI GGGCCC 1 cut(s) 342
PspPI GGNCC 2 cut(s) 342, 343
PstI CTGCAG 1 cut(s) 847
PstNI CAGNNNCTG 2 cut(s) 542, 956
PsuI RGATCY 1 cut(s) 839
PteI GCGCGC 1 cut(s) 1247
PvuI CGATCG 1 cut(s) 1365
PvuII CAGCTG 2 cut(s) 1109, 1153
RsaI GTAC 5 cut(s) 152, 324, 559, 807, 966
RsaNI GTAC 5 cut(s) 151, 323, 558, 806, 965
RseI CAYNNNNRTG 2 cut(s) 388, 782
SacI GAGCTC 1 cut(s) 94
SacII CCGCGG 1 cut(s) 336
SaqAI TTAA 1 cut(s) 1025
Sau3AI GATC 6 cut(s) 241, 521, 839, 1168, 1332, 1362
Sau96I GGNCC 2 cut(s) 342, 343
ScaI AGTACT 1 cut(s) 966
SchI GAGTC 1 cut(s) 827
ScrFI CCNGG 7 cut(s) 87, 210, 287, 659, 660, 897, 1322
SduI GDGCHC 4 cut(s) 94, 233, 346, 773
SfaNI GCATC 4 cut(s) 261, 448, 943, 1189
SfcI CTRYAG 1 cut(s) 843
SfoI GGCGCC 1 cut(s) 695
Sfr274I CTCGAG 1 cut(s) 855
Sfr303I CCGCGG 1 cut(s) 336
SgrBI CCGCGG 1 cut(s) 336
SgsI GGCGCGCC 1 cut(s) 1247
SlaI CTCGAG 1 cut(s) 855
SmaI CCCGGG 1 cut(s) 660
SmiMI CAYNNNNRTG 2 cut(s) 388, 782
SmlI CTYRAG 3 cut(s) 510, 855, 1353
SmoI CTYRAG 3 cut(s) 510, 855, 1353
SnaBI TACGTA 1 cut(s) 782
SphI GCATGC 1 cut(s) 1395
Sse9I AATT 5 cut(s) 15, 475, 572, 901, 1206
SspDI GGCGCC 1 cut(s) 693
SspMI CTAG 2 cut(s) 245, 546
SstI GAGCTC 1 cut(s) 94
StyD4I CCNGG 7 cut(s) 85, 208, 285, 657, 658, 895, 1320
StyI CCWWGG 2 cut(s) 192, 864
TaaI ACNGT 6 cut(s) 127, 449, 852, 996, 1086, 1096
TaiI ACGT 2 cut(s) 168, 784
TaqI TCGA 3 cut(s) 856, 1335, 1365
TasI AATT 5 cut(s) 15, 475, 572, 901, 1206
TatI WGTACW 3 cut(s) 322, 557, 964
TauI GCSGC 8 cut(s) 100, 112, 186, 332, 335, 536, 1079, 1398
TfiI GAWTC 1 cut(s) 1138
Tru1I TTAA 1 cut(s) 1025
Tru9I TTAA 1 cut(s) 1025
TscAI CASTG 5 cut(s) 682, 855, 928, 1001, 1099
TseFI GTSAC 3 cut(s) 259, 358, 1357
TseI GCWGC 4 cut(s) 530, 683, 757, 845
Tsp45I GTSAC 3 cut(s) 259, 358, 1357
TspDTI ATGAA 7 cut(s) 17, 58, 324, 480, 597, 633, 1035
TspGWI ACGGA 4 cut(s) 35, 891, 1283, 1383
TspMI CCCGGG 1 cut(s) 658
TspRI CASTG 5 cut(s) 682, 855, 928, 1001, 1099
Van91I CCANNNNNTGG 1 cut(s) 703
XagI CCTNNNNNAGG 1 cut(s) 466
XapI RAATTY 1 cut(s) 475
XceI RCATGY 1 cut(s) 1395
XhoI CTCGAG 1 cut(s) 855
XmaI CCCGGG 1 cut(s) 658
XmnI GAANNNNTTC 1 cut(s) 1283
XspI CTAG 2 cut(s) 245, 546
ZrmI AGTACT 1 cut(s) 966
Zsp2I ATGCAT 1 cut(s) 1129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.